Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028342.t1 | XP_013457308.1 | 99.5 | 444 | 2 | 0 | 1 | 444 | 1 | 444 | 2.40E-260 | 907.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028342.t1 | Q6VAF7 | 97.0 | 432 | 13 | 0 | 1 | 432 | 1 | 432 | 1.6e-252 | 872.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028342.t1 | A0A072UNG6 | 99.5 | 444 | 2 | 0 | 1 | 444 | 1 | 444 | 1.7e-260 | 907.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028342 | MS.gene58838 | PPI |
| MS.gene028342 | MS.gene014419 | PPI |
| MS.gene028342 | MS.gene34573 | PPI |
| MS.gene028342 | MS.gene017695 | PPI |
| MS.gene028342 | MS.gene36449 | PPI |
| MS.gene064762 | MS.gene028342 | PPI |
| MS.gene028342 | MS.gene024462 | PPI |
| MS.gene49099 | MS.gene028342 | PPI |
| MS.gene35118 | MS.gene028342 | PPI |
| MS.gene36449 | MS.gene028342 | PPI |
| MS.gene028342 | MS.gene025926 | PPI |
| MS.gene69396 | MS.gene028342 | PPI |
| MS.gene028342 | MS.gene42253 | PPI |
| MS.gene028342 | MS.gene22813 | PPI |
| MS.gene028342 | MS.gene013972 | PPI |
| MS.gene028342 | MS.gene34503 | PPI |
| MS.gene050630 | MS.gene028342 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028342.t1 | MTR_4g094535 | 99.550 | 444 | 2 | 0 | 1 | 444 | 1 | 444 | 0.0 | 931 |
| MS.gene028342.t1 | MTR_2g031310 | 96.847 | 444 | 14 | 0 | 1 | 444 | 1 | 444 | 0.0 | 911 |
| MS.gene028342.t1 | MTR_1g101130 | 94.651 | 430 | 23 | 0 | 1 | 430 | 1 | 430 | 0.0 | 840 |
| MS.gene028342.t1 | MTR_4g017630 | 94.651 | 430 | 23 | 0 | 1 | 430 | 1 | 430 | 0.0 | 838 |
| MS.gene028342.t1 | MTR_4g019110 | 94.419 | 430 | 24 | 0 | 1 | 430 | 1 | 430 | 0.0 | 838 |
| MS.gene028342.t1 | MTR_7g089120 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 835 |
| MS.gene028342.t1 | MTR_4g019090 | 94.186 | 430 | 25 | 0 | 1 | 430 | 1 | 430 | 0.0 | 835 |
| MS.gene028342.t1 | MTR_3g113970 | 94.213 | 432 | 23 | 1 | 1 | 430 | 1 | 432 | 0.0 | 833 |
| MS.gene028342.t1 | MTR_8g098360 | 91.395 | 430 | 37 | 0 | 1 | 430 | 1 | 430 | 0.0 | 818 |
| MS.gene028342.t1 | MTR_8g107250 | 89.616 | 443 | 43 | 2 | 1 | 440 | 1 | 443 | 0.0 | 815 |
| MS.gene028342.t1 | MTR_8g085980 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 5.10e-125 | 370 |
| MS.gene028342.t1 | MTR_3g110720 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.29e-123 | 367 |
| MS.gene028342.t1 | MTR_4g097830 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.75e-123 | 366 |
| MS.gene028342.t1 | MTR_1g106005 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 4.49e-122 | 363 |
| MS.gene028342.t1 | MTR_7g085800 | 40.783 | 434 | 247 | 3 | 1 | 424 | 1 | 434 | 1.65e-121 | 361 |
| MS.gene028342.t1 | MTR_6g029190 | 40.315 | 444 | 254 | 2 | 1 | 433 | 1 | 444 | 2.83e-120 | 358 |
| MS.gene028342.t1 | MTR_2g041670 | 37.556 | 450 | 268 | 5 | 1 | 441 | 1 | 446 | 2.74e-99 | 305 |
| MS.gene028342.t1 | MTR_7g117050 | 34.932 | 438 | 268 | 7 | 2 | 423 | 3 | 439 | 2.28e-95 | 295 |
| MS.gene028342.t1 | MTR_2g041400 | 37.471 | 427 | 254 | 5 | 1 | 418 | 1 | 423 | 2.40e-94 | 291 |
| MS.gene028342.t1 | MTR_3g063410 | 33.784 | 148 | 90 | 1 | 256 | 395 | 30 | 177 | 2.56e-28 | 111 |
| MS.gene028342.t1 | MTR_3g063410 | 31.852 | 135 | 84 | 1 | 269 | 395 | 4 | 138 | 4.30e-21 | 90.1 |
| MS.gene028342.t1 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 377 | 405 | 1 | 29 | 8.27e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028342.t1 | AT5G23860 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 842 |
| MS.gene028342.t1 | AT5G23860 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 842 |
| MS.gene028342.t1 | AT5G62700 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 840 |
| MS.gene028342.t1 | AT5G62690 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 840 |
| MS.gene028342.t1 | AT2G29550 | 94.432 | 431 | 24 | 0 | 1 | 431 | 1 | 431 | 0.0 | 839 |
| MS.gene028342.t1 | AT5G44340 | 95.349 | 430 | 20 | 0 | 1 | 430 | 1 | 430 | 0.0 | 838 |
| MS.gene028342.t1 | AT1G20010 | 94.200 | 431 | 24 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| MS.gene028342.t1 | AT1G75780 | 94.200 | 431 | 24 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| MS.gene028342.t1 | AT4G20890 | 95.349 | 430 | 20 | 0 | 1 | 430 | 1 | 430 | 0.0 | 837 |
| MS.gene028342.t1 | AT5G12250 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 835 |
| MS.gene028342.t1 | AT5G19780 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 5.33e-124 | 368 |
| MS.gene028342.t1 | AT5G19770 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 5.33e-124 | 368 |
| MS.gene028342.t1 | AT1G64740 | 40.783 | 434 | 247 | 2 | 1 | 424 | 1 | 434 | 4.72e-123 | 365 |
| MS.gene028342.t1 | AT4G14960 | 41.781 | 438 | 242 | 3 | 1 | 428 | 1 | 435 | 1.22e-121 | 362 |
| MS.gene028342.t1 | AT1G04820 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 7.55e-121 | 360 |
| MS.gene028342.t1 | AT1G50010 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 7.55e-121 | 360 |
| MS.gene028342.t1 | AT4G14960 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 2.03e-103 | 314 |
| MS.gene028342.t1 | AT5G05620 | 34.703 | 438 | 269 | 7 | 2 | 423 | 3 | 439 | 2.12e-94 | 293 |
| MS.gene028342.t1 | AT3G61650 | 34.703 | 438 | 269 | 7 | 2 | 423 | 3 | 439 | 3.75e-94 | 292 |
Find 135 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCGTCTCCATTTCTTTA+TGG | 0.057272 | 4.2:+17932726 | MS.gene028342:CDS |
| GCAGATAACTTCCCAGAATT+TGG | 0.219215 | 4.2:-17930967 | None:intergenic |
| ACCTTTCGCCCAATTATTTC+CGG | 0.230782 | 4.2:-17931204 | None:intergenic |
| AGTCCGGTGCCGGAAATAAT+TGG | 0.234022 | 4.2:+17931195 | MS.gene028342:CDS |
| ACCAGATCGGAGCCAAATTC+TGG | 0.240214 | 4.2:+17930955 | MS.gene028342:CDS |
| CTCTTCGTTCCGGTCCGTTT+GGG | 0.246141 | 4.2:+17931138 | MS.gene028342:CDS |
| TTGGGAGGTGGAACTGGTTC+TGG | 0.253925 | 4.2:+17931653 | MS.gene028342:CDS |
| CGTTCCACGCGCCGTGCTTA+TGG | 0.259332 | 4.2:+17931091 | MS.gene028342:CDS |
| CGCTTCTTATATCGAAGATT+AGG | 0.302722 | 4.2:+17931684 | MS.gene028342:CDS |
| GTCTCCATTTCTTTATGGTT+GGG | 0.343623 | 4.2:+17932731 | MS.gene028342:CDS |
| CATCCATTCAAGAGATGTTC+AGG | 0.347098 | 4.2:+17933061 | MS.gene028342:CDS |
| TCTCTTCGTTCCGGTCCGTT+TGG | 0.350339 | 4.2:+17931137 | MS.gene028342:CDS |
| TGCTGATGAATGCATGGTTT+TGG | 0.356158 | 4.2:+17931823 | MS.gene028342:CDS |
| ATTTCAAGTGTGTCATTCAT+TGG | 0.357158 | 4.2:+17931634 | MS.gene028342:CDS |
| CGTCTCCATTTCTTTATGGT+TGG | 0.360293 | 4.2:+17932730 | MS.gene028342:CDS |
| CACATCTGCTGAGTCAATTC+AGG | 0.373294 | 4.2:-17932805 | None:intergenic |
| CAGTAGCATCCTGGTATTGC+TGG | 0.374586 | 4.2:-17933212 | None:intergenic |
| GCTTCTTATATCGAAGATTA+GGG | 0.388998 | 4.2:+17931685 | MS.gene028342:CDS |
| ACTTGTTGTCTACGTTTCCC+TGG | 0.394853 | 4.2:+17932655 | MS.gene028342:CDS |
| CATTCATTGGGAGGTGGAAC+TGG | 0.395787 | 4.2:+17931647 | MS.gene028342:CDS |
| ACGCTAGACTTGACGTTGTT+GGG | 0.397421 | 4.2:-17932982 | None:intergenic |
| ACCATGGATTCTCTTCGTTC+CGG | 0.400630 | 4.2:+17931128 | MS.gene028342:CDS |
| CGCATTGCCCGCCTTGGATG+TGG | 0.406173 | 4.2:-17930929 | None:intergenic |
| ATCAATCAACTCAGCGCCTT+CGG | 0.406415 | 4.2:-17931234 | None:intergenic |
| CCCAGAATTTGGCTCCGATC+TGG | 0.417231 | 4.2:-17930956 | None:intergenic |
| GGTGGAACTGGTTCTGGAAT+GGG | 0.420584 | 4.2:+17931659 | MS.gene028342:CDS |
| GAAGATTAGGGAAGAGTATC+CGG | 0.429040 | 4.2:+17931697 | MS.gene028342:CDS |
| TTCTGTGTTTCCTTCACCTA+AGG | 0.432433 | 4.2:+17931739 | MS.gene028342:CDS |
| AAGTTGGCATCCACTTTCAT+TGG | 0.434327 | 4.2:+17933030 | MS.gene028342:CDS |
| CACGCTAGACTTGACGTTGT+TGG | 0.439244 | 4.2:-17932983 | None:intergenic |
| TTTCAAGTGTGTCATTCATT+GGG | 0.439707 | 4.2:+17931635 | MS.gene028342:CDS |
| TAGCAGAAATGAGGTGGTTA+AGG | 0.446319 | 4.2:-17932618 | None:intergenic |
| AGATCAGAGTTCAGCTGCCC+AGG | 0.446604 | 4.2:-17932673 | None:intergenic |
| GGCGCAAGGCTTTCTTGCAT+TGG | 0.449590 | 4.2:+17933115 | MS.gene028342:CDS |
| GGAGACGAGGGAATGGGATA+AGG | 0.450931 | 4.2:-17932714 | None:intergenic |
| TGAGTTGATTGATTCCGTTT+TGG | 0.451285 | 4.2:+17931244 | MS.gene028342:CDS |
| GTCCGGTGCCGGAAATAATT+GGG | 0.454869 | 4.2:+17931196 | MS.gene028342:CDS |
| CAAACCCAACCATAAAGAAA+TGG | 0.456807 | 4.2:-17932735 | None:intergenic |
| GGTTACCGCATTGCCCGCCT+TGG | 0.462995 | 4.2:-17930935 | None:intergenic |
| CGAAGAGAATCCATGGTTCC+AGG | 0.464000 | 4.2:-17931122 | None:intergenic |
| GAGTAACATGAATGATTTAG+TGG | 0.471366 | 4.2:+17933182 | MS.gene028342:CDS |
| CGCCCAATTATTTCCGGCAC+CGG | 0.472241 | 4.2:-17931198 | None:intergenic |
| CCAGATCGGAGCCAAATTCT+GGG | 0.474009 | 4.2:+17930956 | MS.gene028342:CDS |
| CTGGGATCCTCTTGATGTCA+AGG | 0.475658 | 4.2:-17932761 | None:intergenic |
| TCTCCTGAACATCTCTTGAA+TGG | 0.476561 | 4.2:-17933064 | None:intergenic |
| TGCTGATGAGGAAGAGTATG+AGG | 0.478765 | 4.2:+17933233 | MS.gene028342:CDS |
| GATGCCAACTTAAGTCCCTT+TGG | 0.482604 | 4.2:-17933018 | None:intergenic |
| CATCTGCTCGTCCACCTCCT+TGG | 0.482638 | 4.2:-17932914 | None:intergenic |
| GTGCTTATGGATCTTGAACC+TGG | 0.487563 | 4.2:+17931104 | MS.gene028342:CDS |
| CACAGCTATGTTTAGGCGCA+AGG | 0.489129 | 4.2:+17933101 | MS.gene028342:CDS |
| CTTGTTGTCTACGTTTCCCT+GGG | 0.489205 | 4.2:+17932656 | MS.gene028342:CDS |
| CAGACAAGTTACGGTACTGC+TGG | 0.489207 | 4.2:-17932780 | None:intergenic |
| TGGTGAGGGAATGGATGAAA+TGG | 0.491207 | 4.2:+17933143 | MS.gene028342:CDS |
| AGAAATGGAGACGAGGGAAT+GGG | 0.491250 | 4.2:-17932720 | None:intergenic |
| GCTTTCTTGCATTGGTACAC+TGG | 0.499379 | 4.2:+17933123 | MS.gene028342:CDS |
| ACAGAAAGCGTTGCATTGTA+AGG | 0.500877 | 4.2:-17931782 | None:intergenic |
| AAGAAATGGAGACGAGGGAA+TGG | 0.501107 | 4.2:-17932721 | None:intergenic |
| GAGGAGGACGAAGAGGAGAT+TGG | 0.504946 | 4.2:+17933252 | MS.gene028342:CDS |
| AGGTGGAACTGGTTCTGGAA+TGG | 0.505865 | 4.2:+17931658 | MS.gene028342:CDS |
| ACCACCAAAGGGACTTAAGT+TGG | 0.517790 | 4.2:+17933014 | MS.gene028342:CDS |
| TGACCGAAAACGAAGTTATC+CGG | 0.518707 | 4.2:-17931173 | None:intergenic |
| CCTCATCAGCAGTAGCATCC+TGG | 0.518800 | 4.2:-17933221 | None:intergenic |
| AATGTCTATTACAATGAAGC+TGG | 0.524418 | 4.2:+17931056 | MS.gene028342:CDS |
| GGATCTTGAACCTGGAACCA+TGG | 0.525143 | 4.2:+17931112 | MS.gene028342:CDS |
| ACTCTTCATACTTTGTTGAG+TGG | 0.525271 | 4.2:+17932956 | MS.gene028342:CDS |
| TTGCATTGGTACACTGGTGA+GGG | 0.526145 | 4.2:+17933129 | MS.gene028342:CDS |
| AAAGATATGCCCAAACGGAC+CGG | 0.527275 | 4.2:-17931147 | None:intergenic |
| CTCATTTCTGCTACCATGAG+TGG | 0.528073 | 4.2:+17932628 | MS.gene028342:CDS |
| ATTCAGGCACAGACAAGTTA+CGG | 0.528087 | 4.2:-17932789 | None:intergenic |
| GTCAAATAACGACCGTGGCG+TGG | 0.528804 | 4.2:-17932859 | None:intergenic |
| ACAACTGTATCAGACACCTT+AGG | 0.530444 | 4.2:-17931755 | None:intergenic |
| TTGGTACACTGGTGAGGGAA+TGG | 0.531429 | 4.2:+17933134 | MS.gene028342:CDS |
| AGAGTATGAGGAGGACGAAG+AGG | 0.534706 | 4.2:+17933245 | MS.gene028342:CDS |
| GTATTGTCCGGTGGAATCGA+TGG | 0.537569 | 4.2:-17931000 | None:intergenic |
| TTTCCTCACAACATCCAAAA+CGG | 0.540847 | 4.2:-17931258 | None:intergenic |
| GAGAATTGTGATTGCTTGCA+AGG | 0.543252 | 4.2:+17931287 | MS.gene028342:CDS |
| AGCAGTTCACAGCTATGTTT+AGG | 0.544065 | 4.2:+17933094 | MS.gene028342:CDS |
| GGCAGAGTACCAGCAATACC+AGG | 0.544880 | 4.2:+17933203 | MS.gene028342:CDS |
| CTGAATTGACTCAGCAGATG+TGG | 0.548224 | 4.2:+17932806 | MS.gene028342:CDS |
| GTGTGGCAAGCTTCAATGTA+CGG | 0.548302 | 4.2:-17931874 | None:intergenic |
| TGGGATCCTCTTGATGTCAA+GGG | 0.552806 | 4.2:-17932760 | None:intergenic |
| AACGTCAACATCATACGATC+CGG | 0.553866 | 4.2:-17931716 | None:intergenic |
| CTTGCATTGGTACACTGGTG+AGG | 0.554328 | 4.2:+17933128 | MS.gene028342:CDS |
| CCAGGATGCTACTGCTGATG+AGG | 0.555022 | 4.2:+17933221 | MS.gene028342:CDS |
| AAATCCTCCACATCCAAGGC+GGG | 0.555066 | 4.2:+17930922 | MS.gene028342:CDS |
| CAAGTGTGTCATTCATTGGG+AGG | 0.556985 | 4.2:+17931638 | MS.gene028342:CDS |
| TAAGATGAGCACCAAGGAGG+TGG | 0.560512 | 4.2:+17932903 | MS.gene028342:CDS |
| TATTACAATGAAGCTGGTGG+TGG | 0.563542 | 4.2:+17931062 | MS.gene028342:CDS |
| TGTTGAATTGCCAATGAAAG+TGG | 0.564438 | 4.2:-17933040 | None:intergenic |
| GTGTGTGATATACCACCAAA+GGG | 0.569448 | 4.2:+17933003 | MS.gene028342:CDS |
| GATACGTTCAAGCTGAAGAT+CGG | 0.570363 | 4.2:-17931033 | None:intergenic |
| GGAATCGCCATTGTATTGTC+CGG | 0.571660 | 4.2:-17931012 | None:intergenic |
| GCCAACTTAAGTCCCTTTGG+TGG | 0.573973 | 4.2:-17933015 | None:intergenic |
| TTTGGATGTTGTGAGGAAAG+AGG | 0.581804 | 4.2:+17931262 | MS.gene028342:CDS |
| CACTCATGGTAGCAGAAATG+AGG | 0.582821 | 4.2:-17932627 | None:intergenic |
| GTGTGTCATTCATTGGGAGG+TGG | 0.583553 | 4.2:+17931641 | MS.gene028342:CDS |
| GCCGGAAATAATTGGGCGAA+AGG | 0.584081 | 4.2:+17931203 | MS.gene028342:CDS |
| GGGCAATGCGGTAACCAGAT+CGG | 0.585645 | 4.2:+17930942 | MS.gene028342:CDS |
| ATTGCCCGCCTTGGATGTGG+AGG | 0.585862 | 4.2:-17930926 | None:intergenic |
| GTTTGGGCATATCTTTCGAC+CGG | 0.589957 | 4.2:+17931154 | MS.gene028342:CDS |
| TGAAAATGCTGATGAATGCA+TGG | 0.590764 | 4.2:+17931817 | MS.gene028342:CDS |
| TTTGCACCCTTGACATCAAG+AGG | 0.593193 | 4.2:+17932754 | MS.gene028342:CDS |
| AGAGAAATCCTCCACATCCA+AGG | 0.593831 | 4.2:+17930918 | MS.gene028342:CDS |
| AGATCCATAAGCACGGCGCG+TGG | 0.594405 | 4.2:-17931095 | None:intergenic |
| ACAACAAGTAACTCCACTCA+TGG | 0.597206 | 4.2:-17932641 | None:intergenic |
| CGTGTGTGATATACCACCAA+AGG | 0.597625 | 4.2:+17933002 | MS.gene028342:CDS |
| ACAATGAAGCTGGTGGTGGA+AGG | 0.601429 | 4.2:+17931066 | MS.gene028342:CDS |
| GTATCAGACACCTTAGGTGA+AGG | 0.604768 | 4.2:-17931749 | None:intergenic |
| ACCGGAACGAAGAGAATCCA+TGG | 0.604786 | 4.2:-17931129 | None:intergenic |
| GATCAGAGTTCAGCTGCCCA+GGG | 0.605765 | 4.2:-17932672 | None:intergenic |
| GGTCGAAAGATATGCCCAAA+CGG | 0.607771 | 4.2:-17931152 | None:intergenic |
| GATTCCACCGGACAATACAA+TGG | 0.609785 | 4.2:+17931005 | MS.gene028342:CDS |
| CCATAAAGAAATGGAGACGA+GGG | 0.610559 | 4.2:-17932726 | None:intergenic |
| AGACAAGTTACGGTACTGCT+GGG | 0.611318 | 4.2:-17932779 | None:intergenic |
| CACATCCAAGGCGGGCAATG+CGG | 0.623370 | 4.2:+17930930 | MS.gene028342:CDS |
| TAAGGTGTCTGATACAGTTG+TGG | 0.624348 | 4.2:+17931757 | MS.gene028342:CDS |
| ATCGCCATTGTATTGTCCGG+TGG | 0.632031 | 4.2:-17931009 | None:intergenic |
| ACTGCTTCAGCAATGTTCCG+TGG | 0.632259 | 4.2:+17932880 | MS.gene028342:CDS |
| GCGAAAGGTCATTACACCGA+AGG | 0.636978 | 4.2:+17931218 | MS.gene028342:CDS |
| GAACACGCCATCGATTCCAC+CGG | 0.641355 | 4.2:+17930993 | MS.gene028342:CDS |
| GAAGAGGAGATTGGTGCTTG+AGG | 0.646494 | 4.2:+17933261 | MS.gene028342:CDS |
| GAGAAACCTACAAGTTGGTG+TGG | 0.655099 | 4.2:-17931891 | None:intergenic |
| TGCGCTGCAGATCCACGCCA+CGG | 0.655282 | 4.2:+17932847 | MS.gene028342:CDS |
| ACCATAAAGAAATGGAGACG+AGG | 0.658939 | 4.2:-17932727 | None:intergenic |
| TCATGGTAGCAGAAATGAGG+TGG | 0.661184 | 4.2:-17932624 | None:intergenic |
| TGAATTGACTCAGCAGATGT+GGG | 0.666761 | 4.2:+17932807 | MS.gene028342:CDS |
| AGGTTCAAGATCCATAAGCA+CGG | 0.668081 | 4.2:-17931102 | None:intergenic |
| CCTTGGTGCTCATCTTACCA+CGG | 0.683046 | 4.2:-17932897 | None:intergenic |
| TGATGAGGAAGAGTATGAGG+AGG | 0.687688 | 4.2:+17933236 | MS.gene028342:CDS |
| GAAATCCTCCACATCCAAGG+CGG | 0.690316 | 4.2:+17930921 | MS.gene028342:CDS |
| GTCTATTACAATGAAGCTGG+TGG | 0.693558 | 4.2:+17931059 | MS.gene028342:CDS |
| CCGTGGTAAGATGAGCACCA+AGG | 0.721405 | 4.2:+17932897 | MS.gene028342:CDS |
| AAGCAGTCAAATAACGACCG+TGG | 0.722335 | 4.2:-17932864 | None:intergenic |
| TGGTAAGATGAGCACCAAGG+AGG | 0.726300 | 4.2:+17932900 | MS.gene028342:CDS |
| GGATGAAATGGAGTTCACTG+AGG | 0.800296 | 4.2:+17933155 | MS.gene028342:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAAATGGAACATA+CGG | - | chr4.2:17932574-17932593 | None:intergenic | 15.0% |
| !! | CATTTACAACAAATTAAATT+AGG | + | chr4.2:17932398-17932417 | MS.gene028342:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | - | chr4.2:17931482-17931501 | None:intergenic | 15.0% |
| !! | AATTAGGATTATAATCATCA+TGG | + | chr4.2:17932414-17932433 | MS.gene028342:intron | 20.0% |
| !! | TTAGATGATTAGATAATGAT+TGG | + | chr4.2:17932032-17932051 | MS.gene028342:intron | 20.0% |
| !!! | TTTTATGTTTTTATTGCAGT+TGG | + | chr4.2:17932592-17932611 | MS.gene028342:intron | 20.0% |
| ! | ATTATCTAGAGATAAAGTGT+TGG | + | chr4.2:17932335-17932354 | MS.gene028342:intron | 25.0% |
| ! | ATTCTAGTAGGTTCAATTAT+AGG | + | chr4.2:17932447-17932466 | MS.gene028342:intron | 25.0% |
| ! | CAGAATGGAATATAATAGAA+TGG | + | chr4.2:17932096-17932115 | MS.gene028342:intron | 25.0% |
| ! | GTGAAATTCAAACAGAATAA+AGG | - | chr4.2:17931920-17931939 | None:intergenic | 25.0% |
| ! | GTTGAAATTCTGTAATCATT+AGG | + | chr4.2:17932507-17932526 | MS.gene028342:intron | 25.0% |
| ! | TTAGATAATGATTGGCAAAT+AGG | + | chr4.2:17932040-17932059 | MS.gene028342:intron | 25.0% |
| !! | TCTGTAATCATTAGGTTTTT+GGG | + | chr4.2:17932515-17932534 | MS.gene028342:intron | 25.0% |
| !! | TTATCTAGAGATAAAGTGTT+GGG | + | chr4.2:17932336-17932355 | MS.gene028342:intron | 25.0% |
| !! | TTCTGTAATCATTAGGTTTT+TGG | + | chr4.2:17932514-17932533 | MS.gene028342:intron | 25.0% |
| AAGATGGCATTTAAAGAGAA+CGG | + | chr4.2:17932206-17932225 | MS.gene028342:intron | 30.0% | |
| AATGTCTATTACAATGAAGC+TGG | + | chr4.2:17931056-17931075 | MS.gene028342:CDS | 30.0% | |
| ACCATCAACAAGATAGTTAT+TGG | - | chr4.2:17932268-17932287 | None:intergenic | 30.0% | |
| AGAGAAACATAAAGTGAAAG+TGG | + | chr4.2:17932164-17932183 | MS.gene028342:intron | 30.0% | |
| ATTATAATCATCATGGTGGT+GGG | + | chr4.2:17932421-17932440 | MS.gene028342:intron | 30.0% | |
| ATTTGGTATGCTTGAAAAGA+TGG | + | chr4.2:17932190-17932209 | MS.gene028342:intron | 30.0% | |
| GAATATAATAGAATGGACCA+GGG | + | chr4.2:17932103-17932122 | MS.gene028342:intron | 30.0% | |
| GAGTAACATGAATGATTTAG+TGG | + | chr4.2:17933182-17933201 | MS.gene028342:CDS | 30.0% | |
| GCTTCTTATATCGAAGATTA+GGG | + | chr4.2:17931685-17931704 | MS.gene028342:CDS | 30.0% | |
| TAAAGTGAAAGTGGTACATT+TGG | + | chr4.2:17932173-17932192 | MS.gene028342:intron | 30.0% | |
| TAGGATTATAATCATCATGG+TGG | + | chr4.2:17932417-17932436 | MS.gene028342:intron | 30.0% | |
| ! | AGTGTTGGGTTAATTAATGA+TGG | + | chr4.2:17932350-17932369 | MS.gene028342:intron | 30.0% |
| ! | ATTTCAAGTGTGTCATTCAT+TGG | + | chr4.2:17931634-17931653 | MS.gene028342:CDS | 30.0% |
| ! | TTATGATATCCTGGCAATTT+TGG | + | chr4.2:17931960-17931979 | MS.gene028342:intron | 30.0% |
| ! | TTTCAAGTGTGTCATTCATT+GGG | + | chr4.2:17931635-17931654 | MS.gene028342:CDS | 30.0% |
| ACTCTTCATACTTTGTTGAG+TGG | + | chr4.2:17932956-17932975 | MS.gene028342:CDS | 35.0% | |
| CAAACCCAACCATAAAGAAA+TGG | - | chr4.2:17932738-17932757 | None:intergenic | 35.0% | |
| CAATCAAAACCAAAATTGCC+AGG | - | chr4.2:17931972-17931991 | None:intergenic | 35.0% | |
| CGCTTCTTATATCGAAGATT+AGG | + | chr4.2:17931684-17931703 | MS.gene028342:CDS | 35.0% | |
| GAAGTTTGTAATGTGTGAAC+AGG | + | chr4.2:17931611-17931630 | MS.gene028342:intron | 35.0% | |
| GATTATAATCATCATGGTGG+TGG | + | chr4.2:17932420-17932439 | MS.gene028342:intron | 35.0% | |
| GCCAATAACTATCTTGTTGA+TGG | + | chr4.2:17932264-17932283 | MS.gene028342:intron | 35.0% | |
| GGAATATAATAGAATGGACC+AGG | + | chr4.2:17932102-17932121 | MS.gene028342:intron | 35.0% | |
| GTCTCCATTTCTTTATGGTT+GGG | + | chr4.2:17932731-17932750 | MS.gene028342:CDS | 35.0% | |
| GTTATGAGTGAGATCAAACA+AGG | - | chr4.2:17932473-17932492 | None:intergenic | 35.0% | |
| TAATGATTGGCAAATAGGAG+AGG | + | chr4.2:17932045-17932064 | MS.gene028342:intron | 35.0% | |
| TCAAATACAGTTATCTACCC+TGG | - | chr4.2:17932123-17932142 | None:intergenic | 35.0% | |
| TGAAAATGCTGATGAATGCA+TGG | + | chr4.2:17931817-17931836 | MS.gene028342:CDS | 35.0% | |
| TGTTGAATTGCCAATGAAAG+TGG | - | chr4.2:17933043-17933062 | None:intergenic | 35.0% | |
| TTTCCTCACAACATCCAAAA+CGG | - | chr4.2:17931261-17931280 | None:intergenic | 35.0% | |
| ! | CTGTGCATTTTATGATATCC+TGG | + | chr4.2:17931951-17931970 | MS.gene028342:intron | 35.0% |
| ! | GATGTCTTTTGTAGACAGAA+TGG | + | chr4.2:17932081-17932100 | MS.gene028342:intron | 35.0% |
| ! | GTAATCTCATGTGTTGATGT+CGG | + | chr4.2:17931513-17931532 | MS.gene028342:intron | 35.0% |
| !! | AACTATCTTGTTGATGGTGT+TGG | + | chr4.2:17932270-17932289 | MS.gene028342:intron | 35.0% |
| !! | ACTATCTTGTTGATGGTGTT+GGG | + | chr4.2:17932271-17932290 | MS.gene028342:intron | 35.0% |
| !!! | TGAGTTGATTGATTCCGTTT+TGG | + | chr4.2:17931244-17931263 | MS.gene028342:CDS | 35.0% |
| AACGTCAACATCATACGATC+CGG | - | chr4.2:17931719-17931738 | None:intergenic | 40.0% | |
| AAGTTGGCATCCACTTTCAT+TGG | + | chr4.2:17933030-17933049 | MS.gene028342:CDS | 40.0% | |
| ACAACAAGTAACTCCACTCA+TGG | - | chr4.2:17932644-17932663 | None:intergenic | 40.0% | |
| ACAACTGTATCAGACACCTT+AGG | - | chr4.2:17931758-17931777 | None:intergenic | 40.0% | |
| ACCATAAAGAAATGGAGACG+AGG | - | chr4.2:17932730-17932749 | None:intergenic | 40.0% | |
| ACCTTTCGCCCAATTATTTC+CGG | - | chr4.2:17931207-17931226 | None:intergenic | 40.0% | |
| AGCAGTTCACAGCTATGTTT+AGG | + | chr4.2:17933094-17933113 | MS.gene028342:CDS | 40.0% | |
| AGGTTCAAGATCCATAAGCA+CGG | - | chr4.2:17931105-17931124 | None:intergenic | 40.0% | |
| ATTCAGGCACAGACAAGTTA+CGG | - | chr4.2:17932792-17932811 | None:intergenic | 40.0% | |
| CATCCATTCAAGAGATGTTC+AGG | + | chr4.2:17933061-17933080 | MS.gene028342:CDS | 40.0% | |
| CCATAAAGAAATGGAGACGA+GGG | - | chr4.2:17932729-17932748 | None:intergenic | 40.0% | |
| CGTCTCCATTTCTTTATGGT+TGG | + | chr4.2:17932730-17932749 | MS.gene028342:CDS | 40.0% | |
| GAGAATTGTGATTGCTTGCA+AGG | + | chr4.2:17931287-17931306 | MS.gene028342:CDS | 40.0% | |
| GATACGTTCAAGCTGAAGAT+CGG | - | chr4.2:17931036-17931055 | None:intergenic | 40.0% | |
| GCAGATAACTTCCCAGAATT+TGG | - | chr4.2:17930970-17930989 | None:intergenic | 40.0% | |
| GTCTATTACAATGAAGCTGG+TGG | + | chr4.2:17931059-17931078 | MS.gene028342:CDS | 40.0% | |
| GTGTGTGATATACCACCAAA+GGG | + | chr4.2:17933003-17933022 | MS.gene028342:CDS | 40.0% | |
| TAGCAGAAATGAGGTGGTTA+AGG | - | chr4.2:17932621-17932640 | None:intergenic | 40.0% | |
| TATTACAATGAAGCTGGTGG+TGG | + | chr4.2:17931062-17931081 | MS.gene028342:CDS | 40.0% | |
| TCTCCTGAACATCTCTTGAA+TGG | - | chr4.2:17933067-17933086 | None:intergenic | 40.0% | |
| TGACCGAAAACGAAGTTATC+CGG | - | chr4.2:17931176-17931195 | None:intergenic | 40.0% | |
| TTCTGTGTTTCCTTCACCTA+AGG | + | chr4.2:17931739-17931758 | MS.gene028342:CDS | 40.0% | |
| TTGATCTCACTCATAACTGC+TGG | + | chr4.2:17932476-17932495 | MS.gene028342:intron | 40.0% | |
| TTTGGATGTTGTGAGGAAAG+AGG | + | chr4.2:17931262-17931281 | MS.gene028342:CDS | 40.0% | |
| ! | TAAGGTGTCTGATACAGTTG+TGG | + | chr4.2:17931757-17931776 | MS.gene028342:CDS | 40.0% |
| ! | TCACTCATAACTGCTGGTTA+TGG | + | chr4.2:17932482-17932501 | MS.gene028342:intron | 40.0% |
| ! | TGAATTGACTCAGCAGATGT+GGG | + | chr4.2:17932807-17932826 | MS.gene028342:CDS | 40.0% |
| ! | TGCTGATGAATGCATGGTTT+TGG | + | chr4.2:17931823-17931842 | MS.gene028342:CDS | 40.0% |
| !! | ACAGAAAGCGTTGCATTGTA+AGG | - | chr4.2:17931785-17931804 | None:intergenic | 40.0% |
| !! | ATTCCGTTTTGGATGTTGTG+AGG | + | chr4.2:17931255-17931274 | MS.gene028342:CDS | 40.0% |
| !! | GAAGATTAGGGAAGAGTATC+CGG | + | chr4.2:17931697-17931716 | MS.gene028342:CDS | 40.0% |
| !! | GTTGTTTCTGCTAGTGTTGA+TGG | + | chr4.2:17932296-17932315 | MS.gene028342:intron | 40.0% |
| !!! | ATGCATGGTTTTGGACAATG+AGG | + | chr4.2:17931832-17931851 | MS.gene028342:CDS | 40.0% |
| AAAGATATGCCCAAACGGAC+CGG | - | chr4.2:17931150-17931169 | None:intergenic | 45.0% | |
| AAGAAATGGAGACGAGGGAA+TGG | - | chr4.2:17932724-17932743 | None:intergenic | 45.0% | |
| AAGCAGTCAAATAACGACCG+TGG | - | chr4.2:17932867-17932886 | None:intergenic | 45.0% | |
| ACCACCAAAGGGACTTAAGT+TGG | + | chr4.2:17933014-17933033 | MS.gene028342:CDS | 45.0% | |
| ACCATGGATTCTCTTCGTTC+CGG | + | chr4.2:17931128-17931147 | MS.gene028342:CDS | 45.0% | |
| ACGCTAGACTTGACGTTGTT+GGG | - | chr4.2:17932985-17933004 | None:intergenic | 45.0% | |
| AGAAATGGAGACGAGGGAAT+GGG | - | chr4.2:17932723-17932742 | None:intergenic | 45.0% | |
| AGACAAGTTACGGTACTGCT+GGG | - | chr4.2:17932782-17932801 | None:intergenic | 45.0% | |
| AGAGAAATCCTCCACATCCA+AGG | + | chr4.2:17930918-17930937 | MS.gene028342:CDS | 45.0% | |
| AGAGAACGGATGAAAGCAGA+TGG | + | chr4.2:17932220-17932239 | MS.gene028342:intron | 45.0% | |
| ATCAATCAACTCAGCGCCTT+CGG | - | chr4.2:17931237-17931256 | None:intergenic | 45.0% | |
| CACATCTGCTGAGTCAATTC+AGG | - | chr4.2:17932808-17932827 | None:intergenic | 45.0% | |
| CACTCATGGTAGCAGAAATG+AGG | - | chr4.2:17932630-17932649 | None:intergenic | 45.0% | |
| CCCTCGTCTCCATTTCTTTA+TGG | + | chr4.2:17932726-17932745 | MS.gene028342:CDS | 45.0% | |
| CGTGTGTGATATACCACCAA+AGG | + | chr4.2:17933002-17933021 | MS.gene028342:CDS | 45.0% | |
| CTCATTTCTGCTACCATGAG+TGG | + | chr4.2:17932628-17932647 | MS.gene028342:CDS | 45.0% | |
| GATGCCAACTTAAGTCCCTT+TGG | - | chr4.2:17933021-17933040 | None:intergenic | 45.0% | |
| GATTCCACCGGACAATACAA+TGG | + | chr4.2:17931005-17931024 | MS.gene028342:CDS | 45.0% | |
| GGAACGAGAAACCTACAAGT+TGG | - | chr4.2:17931899-17931918 | None:intergenic | 45.0% | |
| GGAATCGCCATTGTATTGTC+CGG | - | chr4.2:17931015-17931034 | None:intergenic | 45.0% | |
| GGATGAAATGGAGTTCACTG+AGG | + | chr4.2:17933155-17933174 | MS.gene028342:CDS | 45.0% | |
| GGTCGAAAGATATGCCCAAA+CGG | - | chr4.2:17931155-17931174 | None:intergenic | 45.0% | |
| GTATCAGACACCTTAGGTGA+AGG | - | chr4.2:17931752-17931771 | None:intergenic | 45.0% | |
| GTGCTTATGGATCTTGAACC+TGG | + | chr4.2:17931104-17931123 | MS.gene028342:CDS | 45.0% | |
| GTGTGGCAAGCTTCAATGTA+CGG | - | chr4.2:17931877-17931896 | None:intergenic | 45.0% | |
| GTTTGGGCATATCTTTCGAC+CGG | + | chr4.2:17931154-17931173 | MS.gene028342:CDS | 45.0% | |
| TCATGGTAGCAGAAATGAGG+TGG | - | chr4.2:17932627-17932646 | None:intergenic | 45.0% | |
| TGGGATCCTCTTGATGTCAA+GGG | - | chr4.2:17932763-17932782 | None:intergenic | 45.0% | |
| TGGTGAGGGAATGGATGAAA+TGG | + | chr4.2:17933143-17933162 | MS.gene028342:CDS | 45.0% | |
| TTTGCACCCTTGACATCAAG+AGG | + | chr4.2:17932754-17932773 | MS.gene028342:CDS | 45.0% | |
| ! | AACTTCGTTTTCGGTCAGTC+CGG | + | chr4.2:17931179-17931198 | MS.gene028342:CDS | 45.0% |
| ! | CAAGTGTGTCATTCATTGGG+AGG | + | chr4.2:17931638-17931657 | MS.gene028342:CDS | 45.0% |
| ! | CGACCGGATAACTTCGTTTT+CGG | + | chr4.2:17931170-17931189 | MS.gene028342:CDS | 45.0% |
| ! | CTGAATTGACTCAGCAGATG+TGG | + | chr4.2:17932806-17932825 | MS.gene028342:CDS | 45.0% |
| ! | CTTGTTGTCTACGTTTCCCT+GGG | + | chr4.2:17932656-17932675 | MS.gene028342:CDS | 45.0% |
| ! | GCTTTCTTGCATTGGTACAC+TGG | + | chr4.2:17933123-17933142 | MS.gene028342:CDS | 45.0% |
| ! | TGATGAGGAAGAGTATGAGG+AGG | + | chr4.2:17933236-17933255 | MS.gene028342:CDS | 45.0% |
| ! | TGCTGATGAGGAAGAGTATG+AGG | + | chr4.2:17933233-17933252 | MS.gene028342:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+GGG | + | chr4.2:17933129-17933148 | MS.gene028342:CDS | 45.0% |
| !! | ACTTGTTGTCTACGTTTCCC+TGG | + | chr4.2:17932655-17932674 | MS.gene028342:CDS | 45.0% |
| !! | ATAATCATCATGGTGGTGGG+AGG | + | chr4.2:17932424-17932443 | MS.gene028342:intron | 45.0% |
| !! | GAGAAACCTACAAGTTGGTG+TGG | - | chr4.2:17931894-17931913 | None:intergenic | 45.0% |
| !! | AAAACATAAAAAATTAAAAA+TGG | - | chr4.2:17932583-17932602 | None:intergenic | 5.0% |
| AAATCCTCCACATCCAAGGC+GGG | + | chr4.2:17930922-17930941 | MS.gene028342:CDS | 50.0% | |
| ACCAGATCGGAGCCAAATTC+TGG | + | chr4.2:17930955-17930974 | MS.gene028342:CDS | 50.0% | |
| ACCGGAACGAAGAGAATCCA+TGG | - | chr4.2:17931132-17931151 | None:intergenic | 50.0% | |
| ACTGCTTCAGCAATGTTCCG+TGG | + | chr4.2:17932880-17932899 | MS.gene028342:CDS | 50.0% | |
| AGAGTATGAGGAGGACGAAG+AGG | + | chr4.2:17933245-17933264 | MS.gene028342:CDS | 50.0% | |
| AGCTTGCCACACCAACTTGT+AGG | + | chr4.2:17931885-17931904 | MS.gene028342:intron | 50.0% | |
| ATCGCCATTGTATTGTCCGG+TGG | - | chr4.2:17931012-17931031 | None:intergenic | 50.0% | |
| CACAGCTATGTTTAGGCGCA+AGG | + | chr4.2:17933101-17933120 | MS.gene028342:CDS | 50.0% | |
| CACGCTAGACTTGACGTTGT+TGG | - | chr4.2:17932986-17933005 | None:intergenic | 50.0% | |
| CAGACAAGTTACGGTACTGC+TGG | - | chr4.2:17932783-17932802 | None:intergenic | 50.0% | |
| CAGTAGCATCCTGGTATTGC+TGG | - | chr4.2:17933215-17933234 | None:intergenic | 50.0% | |
| CATTCATTGGGAGGTGGAAC+TGG | + | chr4.2:17931647-17931666 | MS.gene028342:CDS | 50.0% | |
| CCAGATCGGAGCCAAATTCT+GGG | + | chr4.2:17930956-17930975 | MS.gene028342:CDS | 50.0% | |
| CGAAGAGAATCCATGGTTCC+AGG | - | chr4.2:17931125-17931144 | None:intergenic | 50.0% | |
| CTGGGATCCTCTTGATGTCA+AGG | - | chr4.2:17932764-17932783 | None:intergenic | 50.0% | |
| GAAATCCTCCACATCCAAGG+CGG | + | chr4.2:17930921-17930940 | MS.gene028342:CDS | 50.0% | |
| GCCAACTTAAGTCCCTTTGG+TGG | - | chr4.2:17933018-17933037 | None:intergenic | 50.0% | |
| GCCGGAAATAATTGGGCGAA+AGG | + | chr4.2:17931203-17931222 | MS.gene028342:CDS | 50.0% | |
| GCGAAAGGTCATTACACCGA+AGG | + | chr4.2:17931218-17931237 | MS.gene028342:CDS | 50.0% | |
| GGATCTTGAACCTGGAACCA+TGG | + | chr4.2:17931112-17931131 | MS.gene028342:CDS | 50.0% | |
| GTATTGTCCGGTGGAATCGA+TGG | - | chr4.2:17931003-17931022 | None:intergenic | 50.0% | |
| TAAGATGAGCACCAAGGAGG+TGG | + | chr4.2:17932903-17932922 | MS.gene028342:CDS | 50.0% | |
| TCTGACACGACTTGAACACG+TGG | + | chr4.2:17931385-17931404 | MS.gene028342:intron | 50.0% | |
| TGGTAAGATGAGCACCAAGG+AGG | + | chr4.2:17932900-17932919 | MS.gene028342:CDS | 50.0% | |
| TTGGTACACTGGTGAGGGAA+TGG | + | chr4.2:17933134-17933153 | MS.gene028342:CDS | 50.0% | |
| ! | AGTCCGGTGCCGGAAATAAT+TGG | + | chr4.2:17931195-17931214 | MS.gene028342:CDS | 50.0% |
| ! | CTTGCATTGGTACACTGGTG+AGG | + | chr4.2:17933128-17933147 | MS.gene028342:CDS | 50.0% |
| ! | GTCCGGTGCCGGAAATAATT+GGG | + | chr4.2:17931196-17931215 | MS.gene028342:CDS | 50.0% |
| ! | GTGTGTCATTCATTGGGAGG+TGG | + | chr4.2:17931641-17931660 | MS.gene028342:CDS | 50.0% |
| !! | ACAATGAAGCTGGTGGTGGA+AGG | + | chr4.2:17931066-17931085 | MS.gene028342:CDS | 50.0% |
| !! | AGGTGGAACTGGTTCTGGAA+TGG | + | chr4.2:17931658-17931677 | MS.gene028342:CDS | 50.0% |
| !! | CCTTGGTGCTCATCTTACCA+CGG | - | chr4.2:17932900-17932919 | None:intergenic | 50.0% |
| !! | GCTAGTGTTGATGGCAATGC+TGG | + | chr4.2:17932305-17932324 | MS.gene028342:intron | 50.0% |
| !! | GGTGGAACTGGTTCTGGAAT+GGG | + | chr4.2:17931659-17931678 | MS.gene028342:CDS | 50.0% |
| AGATCAGAGTTCAGCTGCCC+AGG | - | chr4.2:17932676-17932695 | None:intergenic | 55.0% | |
| CCAGGATGCTACTGCTGATG+AGG | + | chr4.2:17933221-17933240 | MS.gene028342:CDS | 55.0% | |
| CCGTGGTAAGATGAGCACCA+AGG | + | chr4.2:17932897-17932916 | MS.gene028342:CDS | 55.0% | |
| CCTCATCAGCAGTAGCATCC+TGG | - | chr4.2:17933224-17933243 | None:intergenic | 55.0% | |
| CGCCCAATTATTTCCGGCAC+CGG | - | chr4.2:17931201-17931220 | None:intergenic | 55.0% | |
| CTCTTCGTTCCGGTCCGTTT+GGG | + | chr4.2:17931138-17931157 | MS.gene028342:CDS | 55.0% | |
| GAGGAGGACGAAGAGGAGAT+TGG | + | chr4.2:17933252-17933271 | MS.gene028342:CDS | 55.0% | |
| GATCAGAGTTCAGCTGCCCA+GGG | - | chr4.2:17932675-17932694 | None:intergenic | 55.0% | |
| GGAGACGAGGGAATGGGATA+AGG | - | chr4.2:17932717-17932736 | None:intergenic | 55.0% | |
| GGCGCAAGGCTTTCTTGCAT+TGG | + | chr4.2:17933115-17933134 | MS.gene028342:CDS | 55.0% | |
| GGGCAATGCGGTAACCAGAT+CGG | + | chr4.2:17930942-17930961 | MS.gene028342:CDS | 55.0% | |
| GTCAAATAACGACCGTGGCG+TGG | - | chr4.2:17932862-17932881 | None:intergenic | 55.0% | |
| TCTCTTCGTTCCGGTCCGTT+TGG | + | chr4.2:17931137-17931156 | MS.gene028342:CDS | 55.0% | |
| ! | CCCAGAATTTGGCTCCGATC+TGG | - | chr4.2:17930959-17930978 | None:intergenic | 55.0% |
| ! | GGCAGAGTACCAGCAATACC+AGG | + | chr4.2:17933203-17933222 | MS.gene028342:CDS | 55.0% |
| ! | TTGGGAGGTGGAACTGGTTC+TGG | + | chr4.2:17931653-17931672 | MS.gene028342:CDS | 55.0% |
| !! | GAACACGCCATCGATTCCAC+CGG | + | chr4.2:17930993-17931012 | MS.gene028342:CDS | 55.0% |
| !! | GGTGGTGGGAGGATTCTAGT+AGG | + | chr4.2:17932435-17932454 | MS.gene028342:intron | 55.0% |
| AGATCCATAAGCACGGCGCG+TGG | - | chr4.2:17931098-17931117 | None:intergenic | 60.0% | |
| AGCACCAACACCTCTGACCG+AGG | - | chr4.2:17931562-17931581 | None:intergenic | 60.0% | |
| ATTGCCCGCCTTGGATGTGG+AGG | - | chr4.2:17930929-17930948 | None:intergenic | 60.0% | |
| CACATCCAAGGCGGGCAATG+CGG | + | chr4.2:17930930-17930949 | MS.gene028342:CDS | 60.0% | |
| CATCTGCTCGTCCACCTCCT+TGG | - | chr4.2:17932917-17932936 | None:intergenic | 60.0% | |
| TCAGACACCAGACGCGTCCT+CGG | + | chr4.2:17931542-17931561 | MS.gene028342:intron | 60.0% | |
| ! | GTTTTCGGTCAGTCCGGTGC+CGG | + | chr4.2:17931185-17931204 | MS.gene028342:CDS | 60.0% |
| CGCATTGCCCGCCTTGGATG+TGG | - | chr4.2:17930932-17930951 | None:intergenic | 65.0% | |
| CGTTCCACGCGCCGTGCTTA+TGG | + | chr4.2:17931091-17931110 | MS.gene028342:CDS | 65.0% | |
| GGTTACCGCATTGCCCGCCT+TGG | - | chr4.2:17930938-17930957 | None:intergenic | 65.0% | |
| TGCGCTGCAGATCCACGCCA+CGG | + | chr4.2:17932847-17932866 | MS.gene028342:CDS | 65.0% | |
| ! | GCGTCCTCGGTCAGAGGTGT+TGG | + | chr4.2:17931555-17931574 | MS.gene028342:intron | 65.0% |
| CCAGACGCGTCCTCGGTCAG+AGG | + | chr4.2:17931549-17931568 | MS.gene028342:intron | 70.0% | |
| CCTCTGACCGAGGACGCGTC+TGG | - | chr4.2:17931552-17931571 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 17930915 | 17933281 | 17930915 | ID=MS.gene028342 |
| chr4.2 | mRNA | 17930915 | 17933281 | 17930915 | ID=MS.gene028342.t1;Parent=MS.gene028342 |
| chr4.2 | exon | 17930915 | 17931308 | 17930915 | ID=MS.gene028342.t1.exon1;Parent=MS.gene028342.t1 |
| chr4.2 | CDS | 17930915 | 17931308 | 17930915 | ID=cds.MS.gene028342.t1;Parent=MS.gene028342.t1 |
| chr4.2 | exon | 17931633 | 17931902 | 17931633 | ID=MS.gene028342.t1.exon2;Parent=MS.gene028342.t1 |
| chr4.2 | CDS | 17931633 | 17931902 | 17931633 | ID=cds.MS.gene028342.t1;Parent=MS.gene028342.t1 |
| chr4.2 | exon | 17932611 | 17933281 | 17932611 | ID=MS.gene028342.t1.exon3;Parent=MS.gene028342.t1 |
| chr4.2 | CDS | 17932611 | 17933281 | 17932611 | ID=cds.MS.gene028342.t1;Parent=MS.gene028342.t1 |
| Gene Sequence |
| Protein sequence |
