Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49655.t1 | XP_003613493.1 | 94.7 | 262 | 14 | 0 | 1 | 262 | 1 | 262 | 1.40E-138 | 502.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49655.t1 | Q9LV16 | 48.1 | 293 | 106 | 8 | 5 | 262 | 14 | 295 | 1.9e-59 | 230.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49655.t1 | G7K899 | 94.7 | 262 | 14 | 0 | 1 | 262 | 1 | 262 | 1.0e-138 | 502.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene49655 | 0.817731 | 2.83E-52 | -1.69E-46 |
| MS.gene050646 | MS.gene49655 | 0.807704 | 4.44E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene49655 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene051490 | MS.gene49655 | 0.812271 | 4.61E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene49655 | -0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene49655 | 0.808338 | 3.25E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene49655 | 0.821466 | 3.98E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene49655 | 0.801415 | 9.10E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene49655 | 0.818958 | 1.49E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene49655 | 0.819984 | 8.72E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene49655 | 0.809125 | 2.21E-50 | -1.69E-46 |
| MS.gene058289 | MS.gene49655 | 0.805216 | 1.49E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene49655 | 0.801818 | 7.52E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene49655 | 0.82417 | 9.33E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene49655 | 0.806102 | 9.68E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene49655 | 0.800901 | 1.16E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49655.t1 | MTR_5g037300 | 96.565 | 262 | 9 | 0 | 1 | 262 | 1 | 262 | 0.0 | 525 |
| MS.gene49655.t1 | MTR_8g061960 | 54.610 | 282 | 97 | 8 | 1 | 262 | 1 | 271 | 3.12e-79 | 251 |
| MS.gene49655.t1 | MTR_4g107360 | 41.870 | 246 | 108 | 6 | 18 | 262 | 23 | 234 | 1.51e-50 | 175 |
| MS.gene49655.t1 | MTR_2g018770 | 50.867 | 173 | 83 | 2 | 88 | 260 | 135 | 305 | 7.79e-48 | 167 |
| MS.gene49655.t1 | MTR_2g018770 | 50.867 | 173 | 83 | 2 | 88 | 260 | 135 | 305 | 4.12e-47 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49655.t1 | AT5G62620 | 47.440 | 293 | 108 | 7 | 5 | 262 | 14 | 295 | 5.04e-74 | 237 |
| MS.gene49655.t1 | AT5G62620 | 47.099 | 293 | 109 | 7 | 5 | 262 | 14 | 295 | 3.70e-73 | 236 |
| MS.gene49655.t1 | AT1G74800 | 42.230 | 296 | 114 | 8 | 5 | 262 | 14 | 290 | 1.05e-60 | 203 |
| MS.gene49655.t1 | AT1G27120 | 43.985 | 266 | 100 | 7 | 32 | 261 | 1 | 253 | 1.24e-55 | 189 |
| MS.gene49655.t1 | AT1G27120 | 43.098 | 297 | 120 | 7 | 1 | 261 | 1 | 284 | 1.42e-55 | 189 |
| MS.gene49655.t1 | AT4G21060 | 35.000 | 300 | 154 | 9 | 1 | 261 | 1 | 298 | 4.69e-46 | 164 |
| MS.gene49655.t1 | AT4G21060 | 42.564 | 195 | 108 | 3 | 69 | 261 | 163 | 355 | 3.39e-44 | 159 |
Find 59 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGTTCAGTTTCAGTTTC+TGG | 0.041671 | 5.1:+27955407 | MS.gene49655:CDS |
| GCAAAACATGCTTACATTTC+TGG | 0.132073 | 5.1:+27955293 | MS.gene49655:CDS |
| AGTTTCTGGGTTTGAGTTTA+GGG | 0.201347 | 5.1:+27955421 | MS.gene49655:CDS |
| CAGTTTCTGGGTTTGAGTTT+AGG | 0.201904 | 5.1:+27955420 | MS.gene49655:CDS |
| ACAGTTTATGTTGGAGTTGC+AGG | 0.247501 | 5.1:+27955589 | MS.gene49655:CDS |
| CACCGACGCAATGCCACTTT+TGG | 0.259091 | 5.1:+27955163 | MS.gene49655:CDS |
| TTGAACAGAATACTTGTTAT+AGG | 0.265205 | 5.1:+27955699 | MS.gene49655:CDS |
| TCAGAAACTGTAGCTAATAT+TGG | 0.295572 | 5.1:+27955131 | MS.gene49655:CDS |
| CAGAAACTGTAGCTAATATT+GGG | 0.295921 | 5.1:+27955132 | MS.gene49655:CDS |
| GGAGAAGTTGAAAGGGGTTA+TGG | 0.303614 | 5.1:+27955442 | MS.gene49655:CDS |
| CAAGTATTCTGTTCAATAAC+AGG | 0.310820 | 5.1:-27955692 | None:intergenic |
| GGATTAAAATGCAATATCTT+TGG | 0.314681 | 5.1:-27955641 | None:intergenic |
| TGAGTTCAGTTTCAGTTTCT+GGG | 0.315691 | 5.1:+27955408 | MS.gene49655:CDS |
| AAATGGTGATGAAAAGGTTT+TGG | 0.346138 | 5.1:+27955562 | MS.gene49655:CDS |
| AGCTTTAACAATAGCTTTGA+AGG | 0.353027 | 5.1:+27955248 | MS.gene49655:CDS |
| TGGTCTCATGTCACTGTTGT+GGG | 0.372257 | 5.1:+27955488 | MS.gene49655:CDS |
| TGAATCAGTGTGAGTCTGTT+TGG | 0.386247 | 5.1:-27955029 | None:intergenic |
| TTAGCTTTCAAAGCAGGGTT+AGG | 0.403086 | 5.1:+27955107 | MS.gene49655:CDS |
| ATCCTAGGCTTAAAGGGGAT+TGG | 0.404483 | 5.1:+27955660 | MS.gene49655:CDS |
| GAATCAGTGTGAGTCTGTTT+GGG | 0.411570 | 5.1:-27955028 | None:intergenic |
| TCTCGCGCAGACGAGGAAAC+TGG | 0.429538 | 5.1:+27955761 | MS.gene49655:CDS |
| TTTGGTTTCACAGTTTATGT+TGG | 0.434741 | 5.1:+27955580 | MS.gene49655:CDS |
| AGTTTAGGGAGAAGTTGAAA+GGG | 0.446263 | 5.1:+27955435 | MS.gene49655:CDS |
| AGCCGAAAATGGTTCTGATT+CGG | 0.454611 | 5.1:+27955376 | MS.gene49655:CDS |
| TGAATTGTGGGTTGACACTT+TGG | 0.462030 | 5.1:+27955468 | MS.gene49655:CDS |
| ATTCCCTTAGCTTTCAAAGC+AGG | 0.463054 | 5.1:+27955101 | MS.gene49655:CDS |
| TTCTGTAATAATAGCCCAAA+GGG | 0.467532 | 5.1:-27955212 | None:intergenic |
| AAAGCTATTGTTAAAGCTCA+AGG | 0.468037 | 5.1:-27955243 | None:intergenic |
| TACTTGTTATAGGATGCAAT+GGG | 0.469999 | 5.1:+27955709 | MS.gene49655:CDS |
| CAGTTTATGTTGGAGTTGCA+GGG | 0.480007 | 5.1:+27955590 | MS.gene49655:CDS |
| TTCCCTTAGCTTTCAAAGCA+GGG | 0.485510 | 5.1:+27955102 | MS.gene49655:CDS |
| GAGTTTAGGGAGAAGTTGAA+AGG | 0.487616 | 5.1:+27955434 | MS.gene49655:CDS |
| TTAAAATGCAATATCTTTGG+TGG | 0.500868 | 5.1:-27955638 | None:intergenic |
| CTCCAATCCCCTTTAAGCCT+AGG | 0.511635 | 5.1:-27955662 | None:intergenic |
| CAAAAGTGGCATTGCGTCGG+TGG | 0.518507 | 5.1:-27955162 | None:intergenic |
| TAACCCTGCTTTGAAAGCTA+AGG | 0.531599 | 5.1:-27955105 | None:intergenic |
| TTGGTCTCATGTCACTGTTG+TGG | 0.531891 | 5.1:+27955487 | MS.gene49655:CDS |
| GATCATACATGCATATCAAA+GGG | 0.534974 | 5.1:-27955795 | None:intergenic |
| GTTTAGGGAGAAGTTGAAAG+GGG | 0.540195 | 5.1:+27955436 | MS.gene49655:CDS |
| ATACTTGTTATAGGATGCAA+TGG | 0.559411 | 5.1:+27955708 | MS.gene49655:CDS |
| TTCCAAAAGTGGCATTGCGT+CGG | 0.559633 | 5.1:-27955165 | None:intergenic |
| CTGGTCTTAGGTGTGAGGGA+TGG | 0.564643 | 5.1:+27955735 | MS.gene49655:CDS |
| TTATGGGAAGAAGTTGAAAG+TGG | 0.572071 | 5.1:+27955323 | MS.gene49655:CDS |
| GGGACTGGTCTTAGGTGTGA+GGG | 0.573659 | 5.1:+27955731 | MS.gene49655:CDS |
| GGTCTCATGTCACTGTTGTG+GGG | 0.579148 | 5.1:+27955489 | MS.gene49655:CDS |
| GGTGAGAGTGATCCAAAGAT+TGG | 0.581545 | 5.1:+27955530 | MS.gene49655:CDS |
| AACCCTGCTTTGAAAGCTAA+GGG | 0.581962 | 5.1:-27955104 | None:intergenic |
| AAGCAGAACAAAGATGAAGA+AGG | 0.595481 | 5.1:+27954983 | None:intergenic |
| AGAAACTGTAGCTAATATTG+GGG | 0.603844 | 5.1:+27955133 | MS.gene49655:CDS |
| ATGGAAGTCTCGCGCAGACG+AGG | 0.612244 | 5.1:+27955754 | MS.gene49655:CDS |
| TTTCTGTAATAATAGCCCAA+AGG | 0.619004 | 5.1:-27955213 | None:intergenic |
| GGGGACTGGTCTTAGGTGTG+AGG | 0.628385 | 5.1:+27955730 | MS.gene49655:CDS |
| AGGCTTAAAGGGGATTGGAG+TGG | 0.637414 | 5.1:+27955665 | MS.gene49655:CDS |
| CTCTCACCATGTGCATAACG+TGG | 0.646342 | 5.1:-27955515 | None:intergenic |
| CTTGTTATAGGATGCAATGG+GGG | 0.660917 | 5.1:+27955711 | MS.gene49655:CDS |
| GAGAGTGATCCAAAGATTGG+TGG | 0.662396 | 5.1:+27955533 | MS.gene49655:CDS |
| AGGTGTATCAGAGCTTGACA+AGG | 0.692114 | 5.1:+27955268 | MS.gene49655:CDS |
| GGGACACCACGTTATGCACA+TGG | 0.708767 | 5.1:+27955509 | MS.gene49655:CDS |
| ACTTGTTATAGGATGCAATG+GGG | 0.716500 | 5.1:+27955710 | MS.gene49655:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GGATTAAAATGCAATATCTT+TGG | - | chr5.1:27955644-27955663 | None:intergenic | 25.0% |
| ! | TTAAAATGCAATATCTTTGG+TGG | - | chr5.1:27955641-27955660 | None:intergenic | 25.0% |
| !! | TGGTAAAGTTAAGAGTTTTT+CGG | + | chr5.1:27955343-27955362 | MS.gene49655:CDS | 25.0% |
| !!! | ACATTTCTGGTAAAAAGTTA+TGG | + | chr5.1:27955306-27955325 | MS.gene49655:CDS | 25.0% |
| !!! | AGATATTGCATTTTAATCCT+AGG | + | chr5.1:27955645-27955664 | MS.gene49655:CDS | 25.0% |
| !!! | ATTTTAATCCTAGGCTTAAA+GGG | + | chr5.1:27955654-27955673 | MS.gene49655:CDS | 25.0% |
| !!! | CATTTCTGGTAAAAAGTTAT+GGG | + | chr5.1:27955307-27955326 | MS.gene49655:CDS | 25.0% |
| !!! | TTGAACAGAATACTTGTTAT+AGG | + | chr5.1:27955699-27955718 | MS.gene49655:CDS | 25.0% |
| AAAGCTATTGTTAAAGCTCA+AGG | - | chr5.1:27955246-27955265 | None:intergenic | 30.0% | |
| AGAAACTGTAGCTAATATTG+GGG | + | chr5.1:27955133-27955152 | MS.gene49655:CDS | 30.0% | |
| CAAGTATTCTGTTCAATAAC+AGG | - | chr5.1:27955695-27955714 | None:intergenic | 30.0% | |
| CAGAAACTGTAGCTAATATT+GGG | + | chr5.1:27955132-27955151 | MS.gene49655:CDS | 30.0% | |
| TCAGAAACTGTAGCTAATAT+TGG | + | chr5.1:27955131-27955150 | MS.gene49655:CDS | 30.0% | |
| TTCTGTAATAATAGCCCAAA+GGG | - | chr5.1:27955215-27955234 | None:intergenic | 30.0% | |
| TTTCTGTAATAATAGCCCAA+AGG | - | chr5.1:27955216-27955235 | None:intergenic | 30.0% | |
| ! | GGTAAAGTTAAGAGTTTTTC+GGG | + | chr5.1:27955344-27955363 | MS.gene49655:CDS | 30.0% |
| ! | TGTGAAAAATGGTGATGAAA+AGG | + | chr5.1:27955556-27955575 | MS.gene49655:CDS | 30.0% |
| ! | TTTGGTTTCACAGTTTATGT+TGG | + | chr5.1:27955580-27955599 | MS.gene49655:CDS | 30.0% |
| ! | TTTTAATCCTAGGCTTAAAG+GGG | + | chr5.1:27955655-27955674 | MS.gene49655:CDS | 30.0% |
| !! | AAATGGTGATGAAAAGGTTT+TGG | + | chr5.1:27955562-27955581 | MS.gene49655:CDS | 30.0% |
| !! | AGCTTTAACAATAGCTTTGA+AGG | + | chr5.1:27955248-27955267 | MS.gene49655:CDS | 30.0% |
| !! | ATACTTGTTATAGGATGCAA+TGG | + | chr5.1:27955708-27955727 | MS.gene49655:CDS | 30.0% |
| !! | CATTTTAATCCTAGGCTTAA+AGG | + | chr5.1:27955653-27955672 | MS.gene49655:CDS | 30.0% |
| !! | TACTTGTTATAGGATGCAAT+GGG | + | chr5.1:27955709-27955728 | MS.gene49655:CDS | 30.0% |
| !!! | GGTTTTAAAAAAGCCGAAAA+TGG | + | chr5.1:27955365-27955384 | MS.gene49655:CDS | 30.0% |
| ACAAACAAAAACGACCCTTT+GGG | + | chr5.1:27955198-27955217 | MS.gene49655:CDS | 35.0% | |
| AGTTTAGGGAGAAGTTGAAA+GGG | + | chr5.1:27955435-27955454 | MS.gene49655:CDS | 35.0% | |
| GCAAAACATGCTTACATTTC+TGG | + | chr5.1:27955293-27955312 | MS.gene49655:CDS | 35.0% | |
| TGAGTTCAGTTTCAGTTTCT+GGG | + | chr5.1:27955408-27955427 | MS.gene49655:CDS | 35.0% | |
| TTATGGGAAGAAGTTGAAAG+TGG | + | chr5.1:27955323-27955342 | MS.gene49655:CDS | 35.0% | |
| TTGAGTTCAGTTTCAGTTTC+TGG | + | chr5.1:27955407-27955426 | MS.gene49655:CDS | 35.0% | |
| ! | AGTTTCTGGGTTTGAGTTTA+GGG | + | chr5.1:27955421-27955440 | MS.gene49655:CDS | 35.0% |
| ! | ATCCGAATCAGAACCATTTT+CGG | - | chr5.1:27955381-27955400 | None:intergenic | 35.0% |
| ! | TTTTTCACACCACCAATCTT+TGG | - | chr5.1:27955545-27955564 | None:intergenic | 35.0% |
| !! | AAGATTGGTGGTGTGAAAAA+TGG | + | chr5.1:27955545-27955564 | MS.gene49655:CDS | 35.0% |
| !! | ACTTGTTATAGGATGCAATG+GGG | + | chr5.1:27955710-27955729 | MS.gene49655:CDS | 35.0% |
| !!! | GGGTTATGGTTTTGAATTGT+GGG | + | chr5.1:27955456-27955475 | MS.gene49655:CDS | 35.0% |
| !!! | TGGTTTTGTTCTTCCAAAAG+TGG | - | chr5.1:27955179-27955198 | None:intergenic | 35.0% |
| ACAGTTTATGTTGGAGTTGC+AGG | + | chr5.1:27955589-27955608 | MS.gene49655:CDS | 40.0% | |
| CACAAACAAAAACGACCCTT+TGG | + | chr5.1:27955197-27955216 | MS.gene49655:CDS | 40.0% | |
| CAGTTTATGTTGGAGTTGCA+GGG | + | chr5.1:27955590-27955609 | MS.gene49655:CDS | 40.0% | |
| GAATCAGTGTGAGTCTGTTT+GGG | - | chr5.1:27955031-27955050 | None:intergenic | 40.0% | |
| GAGTTTAGGGAGAAGTTGAA+AGG | + | chr5.1:27955434-27955453 | MS.gene49655:CDS | 40.0% | |
| GTTTAGGGAGAAGTTGAAAG+GGG | + | chr5.1:27955436-27955455 | MS.gene49655:CDS | 40.0% | |
| TGAATCAGTGTGAGTCTGTT+TGG | - | chr5.1:27955032-27955051 | None:intergenic | 40.0% | |
| ! | ATTCCCTTAGCTTTCAAAGC+AGG | + | chr5.1:27955101-27955120 | MS.gene49655:CDS | 40.0% |
| ! | CAGTTTCTGGGTTTGAGTTT+AGG | + | chr5.1:27955420-27955439 | MS.gene49655:CDS | 40.0% |
| ! | CTTGTTATAGGATGCAATGG+GGG | + | chr5.1:27955711-27955730 | MS.gene49655:CDS | 40.0% |
| ! | TGAATTGTGGGTTGACACTT+TGG | + | chr5.1:27955468-27955487 | MS.gene49655:CDS | 40.0% |
| ! | TTAGCTTTCAAAGCAGGGTT+AGG | + | chr5.1:27955107-27955126 | MS.gene49655:CDS | 40.0% |
| ! | TTCCCTTAGCTTTCAAAGCA+GGG | + | chr5.1:27955102-27955121 | MS.gene49655:CDS | 40.0% |
| !! | AACCCTGCTTTGAAAGCTAA+GGG | - | chr5.1:27955107-27955126 | None:intergenic | 40.0% |
| !! | AGCCGAAAATGGTTCTGATT+CGG | + | chr5.1:27955376-27955395 | MS.gene49655:CDS | 40.0% |
| !! | TAACCCTGCTTTGAAAGCTA+AGG | - | chr5.1:27955108-27955127 | None:intergenic | 40.0% |
| !!! | CAAAGGGTCGTTTTTGTTTG+TGG | - | chr5.1:27955199-27955218 | None:intergenic | 40.0% |
| !!! | GGGGTTATGGTTTTGAATTG+TGG | + | chr5.1:27955455-27955474 | MS.gene49655:CDS | 40.0% |
| AGGTGTATCAGAGCTTGACA+AGG | + | chr5.1:27955268-27955287 | MS.gene49655:CDS | 45.0% | |
| ATCCTAGGCTTAAAGGGGAT+TGG | + | chr5.1:27955660-27955679 | MS.gene49655:CDS | 45.0% | |
| GAGAGTGATCCAAAGATTGG+TGG | + | chr5.1:27955533-27955552 | MS.gene49655:CDS | 45.0% | |
| GGAGAAGTTGAAAGGGGTTA+TGG | + | chr5.1:27955442-27955461 | MS.gene49655:CDS | 45.0% | |
| GGTGAGAGTGATCCAAAGAT+TGG | + | chr5.1:27955530-27955549 | MS.gene49655:CDS | 45.0% | |
| TGGTCTCATGTCACTGTTGT+GGG | + | chr5.1:27955488-27955507 | MS.gene49655:CDS | 45.0% | |
| TTCCAAAAGTGGCATTGCGT+CGG | - | chr5.1:27955168-27955187 | None:intergenic | 45.0% | |
| TTGGTCTCATGTCACTGTTG+TGG | + | chr5.1:27955487-27955506 | MS.gene49655:CDS | 45.0% | |
| AGGCTTAAAGGGGATTGGAG+TGG | + | chr5.1:27955665-27955684 | MS.gene49655:CDS | 50.0% | |
| CTCCAATCCCCTTTAAGCCT+AGG | - | chr5.1:27955665-27955684 | None:intergenic | 50.0% | |
| CTCTCACCATGTGCATAACG+TGG | - | chr5.1:27955518-27955537 | None:intergenic | 50.0% | |
| GGTCTCATGTCACTGTTGTG+GGG | + | chr5.1:27955489-27955508 | MS.gene49655:CDS | 50.0% | |
| TATAGGATGCAATGGGGGAC+TGG | + | chr5.1:27955716-27955735 | MS.gene49655:CDS | 50.0% | |
| CAAAAGTGGCATTGCGTCGG+TGG | - | chr5.1:27955165-27955184 | None:intergenic | 55.0% | |
| GGGACACCACGTTATGCACA+TGG | + | chr5.1:27955509-27955528 | MS.gene49655:CDS | 55.0% | |
| !! | CTGGTCTTAGGTGTGAGGGA+TGG | + | chr5.1:27955735-27955754 | MS.gene49655:CDS | 55.0% |
| !! | GGGACTGGTCTTAGGTGTGA+GGG | + | chr5.1:27955731-27955750 | MS.gene49655:CDS | 55.0% |
| !! | TGCAATGGGGGACTGGTCTT+AGG | + | chr5.1:27955723-27955742 | MS.gene49655:CDS | 55.0% |
| !!! | CACCGACGCAATGCCACTTT+TGG | + | chr5.1:27955163-27955182 | MS.gene49655:CDS | 55.0% |
| ATGGAAGTCTCGCGCAGACG+AGG | + | chr5.1:27955754-27955773 | MS.gene49655:CDS | 60.0% | |
| TCTCGCGCAGACGAGGAAAC+TGG | + | chr5.1:27955761-27955780 | MS.gene49655:CDS | 60.0% | |
| !! | GGGGACTGGTCTTAGGTGTG+AGG | + | chr5.1:27955730-27955749 | MS.gene49655:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 27954996 | 27955802 | 27954996 | ID=MS.gene49655 |
| chr5.1 | mRNA | 27954996 | 27955802 | 27954996 | ID=MS.gene49655.t1;Parent=MS.gene49655 |
| chr5.1 | exon | 27954996 | 27955802 | 27954996 | ID=MS.gene49655.t1.exon1;Parent=MS.gene49655.t1 |
| chr5.1 | CDS | 27954996 | 27955802 | 27954996 | ID=cds.MS.gene49655.t1;Parent=MS.gene49655.t1 |
| Gene Sequence |
| Protein sequence |
