Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49681.t1 | XP_003630609.1 | 48.6 | 251 | 24 | 3 | 1 | 146 | 725 | 975 | 9.20E-43 | 183.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49681.t1 | Q9ZVW2 | 37.5 | 251 | 52 | 3 | 1 | 146 | 736 | 986 | 3.1e-31 | 136.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49681.t1 | G7LIV7 | 48.6 | 251 | 24 | 3 | 1 | 146 | 725 | 975 | 6.6e-43 | 183.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene49681 | 0.804817 | 1.80E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene49681 | 0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene49681 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene49681 | 0.812423 | 4.27E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene49681 | 0.804493 | 2.10E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene49681 | 0.804326 | 2.28E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene49681 | 0.805783 | 1.13E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene49681 | 0.817667 | 2.93E-52 | -1.69E-46 |
| MS.gene051490 | MS.gene49681 | 0.803885 | 2.82E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene49681 | 0.818753 | 1.66E-52 | -1.69E-46 |
| MS.gene051790 | MS.gene49681 | 0.800118 | 1.67E-48 | -1.69E-46 |
| MS.gene052020 | MS.gene49681 | 0.808324 | 3.28E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene49681 | 0.801746 | 7.79E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene49681 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene49681 | 0.824775 | 6.72E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene49681 | 0.806323 | 8.70E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene49681 | 0.824466 | 7.95E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene49681 | 0.808167 | 3.54E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene49681 | 0.824404 | 8.22E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49681.t1 | MTR_8g101340 | 98.333 | 60 | 1 | 0 | 1 | 60 | 725 | 784 | 5.13e-33 | 124 |
| MS.gene49681.t1 | MTR_8g101340 | 57.851 | 121 | 34 | 4 | 26 | 146 | 872 | 975 | 1.31e-32 | 122 |
| MS.gene49681.t1 | MTR_5g069360 | 45.714 | 140 | 48 | 6 | 22 | 156 | 851 | 967 | 1.99e-26 | 105 |
| MS.gene49681.t1 | MTR_5g069360 | 66.667 | 60 | 18 | 1 | 3 | 60 | 708 | 767 | 8.68e-18 | 80.1 |
| MS.gene49681.t1 | MTR_7g080730 | 38.542 | 96 | 49 | 3 | 51 | 145 | 887 | 973 | 6.59e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49681.t1 | AT2G06990 | 48.551 | 138 | 47 | 5 | 10 | 146 | 872 | 986 | 8.21e-28 | 108 |
| MS.gene49681.t1 | AT2G06990 | 68.333 | 60 | 19 | 0 | 1 | 60 | 736 | 795 | 9.58e-21 | 88.6 |
Find 33 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAATCCTTTGTCTGCATT+GGG | 0.239290 | 4.4:-8295018 | MS.gene49681:CDS |
| TCTTCGAGGGGAGTATCATT+AGG | 0.360737 | 4.4:-8296557 | MS.gene49681:CDS |
| TCAGAATCCTTTGTCTGCAT+TGG | 0.370934 | 4.4:-8295019 | MS.gene49681:CDS |
| CACCTGTCTGAATTAATTAA+CGG | 0.402317 | 4.4:+8295067 | None:intergenic |
| GTTTGATCATCCTATGCATA+AGG | 0.424049 | 4.4:-8299731 | MS.gene49681:intron |
| AAATGAGCGGTTATTTGTAC+TGG | 0.436437 | 4.4:-8296668 | MS.gene49681:CDS |
| TGCAGTTGGAGAAGCTGACT+TGG | 0.449759 | 4.4:-8295764 | MS.gene49681:CDS |
| CTTCGAGGGGAGTATCATTA+GGG | 0.456913 | 4.4:-8296556 | MS.gene49681:CDS |
| GTCCGTTAATTAATTCAGAC+AGG | 0.469436 | 4.4:-8295069 | MS.gene49681:CDS |
| CGTGCTGCTGCTGATGCAGT+TGG | 0.474550 | 4.4:-8295778 | MS.gene49681:CDS |
| CGCAGGATTTATGCAAACCT+TGG | 0.476067 | 4.4:-8296706 | MS.gene49681:CDS |
| GTATCATTAGGGCAGCTAGA+AGG | 0.486870 | 4.4:-8296545 | MS.gene49681:CDS |
| AGCGAATGAAAGCCTTCGAC+GGG | 0.494908 | 4.4:-8295725 | MS.gene49681:CDS |
| TTTGTCTGCATTGGGGATTG+AGG | 0.509134 | 4.4:-8295010 | None:intergenic |
| TGAACTTGTCAATCAAATAG+AGG | 0.511641 | 4.4:-8299770 | MS.gene49681:CDS |
| GATTCTGAAGGTAGACGTAC+AGG | 0.521525 | 4.4:+8295034 | None:intergenic |
| CAAATGACTGACATCTTCGA+GGG | 0.531212 | 4.4:-8296570 | MS.gene49681:CDS |
| TCATGAAATTCAACAACTGA+AGG | 0.546269 | 4.4:-8299562 | MS.gene49681:CDS |
| AGAATCCTTTGTCTGCATTG+GGG | 0.548794 | 4.4:-8295017 | MS.gene49681:CDS |
| TCAAATGACTGACATCTTCG+AGG | 0.556182 | 4.4:-8296571 | MS.gene49681:CDS |
| CAGCGAATGAAAGCCTTCGA+CGG | 0.562359 | 4.4:-8295726 | MS.gene49681:CDS |
| TTTGCATAAATCCTGCGTCT+AGG | 0.566496 | 4.4:+8296712 | None:intergenic |
| TCAATCCCCAATGCAGACAA+AGG | 0.585993 | 4.4:+8295012 | None:intergenic |
| TGCAAACCTTGGTTCATGAG+TGG | 0.589669 | 4.4:-8296695 | MS.gene49681:CDS |
| TGTTAGTTAGATTCAAGATG+TGG | 0.602043 | 4.4:-8299622 | MS.gene49681:intron |
| ATCAAATTAAGTGCTTTGAG+AGG | 0.623177 | 4.4:-8299599 | MS.gene49681:CDS |
| TTTCATCCACTCATGAACCA+AGG | 0.625812 | 4.4:+8296689 | None:intergenic |
| ATGCAGACAAAGGATTCTGA+AGG | 0.636356 | 4.4:+8295022 | None:intergenic |
| CGTTAATTAATTCAGACAGG+TGG | 0.649440 | 4.4:-8295066 | MS.gene49681:CDS |
| CATGTAGACATCCTAGACGC+AGG | 0.679061 | 4.4:-8296723 | MS.gene49681:CDS |
| AAATGACTGACATCTTCGAG+GGG | 0.700286 | 4.4:-8296569 | MS.gene49681:CDS |
| CATGAGTGGATGAAAATGAG+CGG | 0.711632 | 4.4:-8296681 | MS.gene49681:CDS |
| GCGAATGAAAGCCTTCGACG+GGG | 0.744115 | 4.4:-8295724 | MS.gene49681:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAATTAAATTAAAT+TGG | - | chr4.4:8296124-8296143 | MS.gene49681:intron | 0.0% |
| !! | ATATATATATATATATACAG+GGG | + | chr4.4:8295452-8295433 | None:intergenic | 10.0% |
| !! | ATATATATATATATATACAG+TGG | - | chr4.4:8295433-8295452 | MS.gene49681:intron | 10.0% |
| !! | AAGAAGATATTAAATGAATA+AGG | + | chr4.4:8299498-8299517 | None:intergenic | 15.0% |
| !! | ACATTTATATATAGAGAATA+TGG | + | chr4.4:8295123-8295142 | None:intergenic | 15.0% |
| !! | ATATATAAATGTGATGTTAT+TGG | - | chr4.4:8295131-8295150 | MS.gene49681:intron | 15.0% |
| !! | CAGTTTAGAAAAATAAATTA+AGG | + | chr4.4:8296564-8296583 | None:intergenic | 15.0% |
| !! | TCTAATATATATTCATAGAA+GGG | + | chr4.4:8298378-8298397 | None:intergenic | 15.0% |
| !! | TTCTAATATATATTCATAGA+AGG | + | chr4.4:8298379-8298398 | None:intergenic | 15.0% |
| !!! | AGAAATCATATCATAATTTT+GGG | - | chr4.4:8298676-8298695 | MS.gene49681:intron | 15.0% |
| !!! | TATACATATATTTTTTTTGG+TGG | + | chr4.4:8295703-8295722 | None:intergenic | 15.0% |
| !!! | TTATCTCTATATGATATTTT+AGG | - | chr4.4:8298908-8298927 | MS.gene49681:intron | 15.0% |
| !! | AAAGCAAAATAAAGAATACA+AGG | - | chr4.4:8297523-8297542 | MS.gene49681:intron | 20.0% |
| !! | AAGCAAAATAAAGAATACAA+GGG | - | chr4.4:8297524-8297543 | MS.gene49681:intron | 20.0% |
| !! | AGTTGTTAATTATTCACATT+TGG | + | chr4.4:8296450-8296469 | None:intergenic | 20.0% |
| !! | ATTAACAACTTAACATTTGA+TGG | - | chr4.4:8296460-8296479 | MS.gene49681:intron | 20.0% |
| !! | ATTATCAAGGGATAATAATT+TGG | + | chr4.4:8298475-8298494 | None:intergenic | 20.0% |
| !! | GTAAAATGTAGTAAATAATG+AGG | + | chr4.4:8295310-8295329 | None:intergenic | 20.0% |
| !! | GTAACATTTATTTATTGTCT+TGG | + | chr4.4:8299437-8299456 | None:intergenic | 20.0% |
| !! | GTGAAAACATGTATATAATT+CGG | - | chr4.4:8298947-8298966 | MS.gene49681:intron | 20.0% |
| !! | GTTAGTACAAAAATATTTAG+AGG | + | chr4.4:8299372-8299391 | None:intergenic | 20.0% |
| !! | TAATTATGAAACACAAACAA+CGG | + | chr4.4:8298852-8298871 | None:intergenic | 20.0% |
| !! | TATATAATCAGGAACTAATT+TGG | + | chr4.4:8295852-8295871 | None:intergenic | 20.0% |
| !! | TCAAAATGTGACAATAAAAA+AGG | + | chr4.4:8299401-8299420 | None:intergenic | 20.0% |
| !! | TTAAATGAATAAGGTCATTA+TGG | + | chr4.4:8299489-8299508 | None:intergenic | 20.0% |
| !! | TTAACAACTTAACATTTGAT+GGG | - | chr4.4:8296461-8296480 | MS.gene49681:intron | 20.0% |
| !! | TTCACCATTAAACATTAATT+CGG | + | chr4.4:8296788-8296807 | None:intergenic | 20.0% |
| !! | TTCATAATTATGTTTACCAT+TGG | - | chr4.4:8298862-8298881 | MS.gene49681:intron | 20.0% |
| !!! | AATTTTTTTTTTTTGGTGAC+CGG | + | chr4.4:8295817-8295836 | None:intergenic | 20.0% |
| !!! | ATTTTACTATTAAGCTAACT+AGG | - | chr4.4:8295323-8295342 | MS.gene49681:intron | 20.0% |
| !!! | GAGAAATCATATCATAATTT+TGG | - | chr4.4:8298675-8298694 | MS.gene49681:intron | 20.0% |
| !!! | TTTAAAACTTAATAGAGTCA+TGG | - | chr4.4:8295895-8295914 | MS.gene49681:intron | 20.0% |
| ! | AAAAATATTTAGAGGTGGTT+TGG | + | chr4.4:8299364-8299383 | None:intergenic | 25.0% |
| ! | AAACTTGTGTTCAAACTTAA+AGG | + | chr4.4:8297563-8297582 | None:intergenic | 25.0% |
| ! | AAGATTGTTCTACAAAGTTA+TGG | - | chr4.4:8295954-8295973 | MS.gene49681:intron | 25.0% |
| ! | AATAGTGTAGTTCAATTGAA+AGG | - | chr4.4:8296718-8296737 | MS.gene49681:CDS | 25.0% |
| ! | AGCAAAATAAAGAATACAAG+GGG | - | chr4.4:8297525-8297544 | MS.gene49681:intron | 25.0% |
| ! | AGTACAAAAATATTTAGAGG+TGG | + | chr4.4:8299369-8299388 | None:intergenic | 25.0% |
| ! | ATGTGACAATAAAAAAGGAA+CGG | + | chr4.4:8299396-8299415 | None:intergenic | 25.0% |
| ! | GCATAATCATAATATATGCA+AGG | - | chr4.4:8295776-8295795 | MS.gene49681:CDS | 25.0% |
| ! | TAAATAGCTAAGGGTAATAA+TGG | - | chr4.4:8299540-8299559 | MS.gene49681:intron | 25.0% |
| ! | TAGAGAAAAAAGTAGGATAT+TGG | - | chr4.4:8296301-8296320 | MS.gene49681:intron | 25.0% |
| ! | TATATATATATATACAGGGG+CGG | + | chr4.4:8296382-8296401 | None:intergenic | 25.0% |
| ! | TATATTACATCCATCAAGAA+TGG | + | chr4.4:8297192-8297211 | None:intergenic | 25.0% |
| ! | TATCAAACATTACATACGTA+AGG | + | chr4.4:8298771-8298790 | None:intergenic | 25.0% |
| ! | TGCAAAATAGAGAAAAAAGT+AGG | - | chr4.4:8296294-8296313 | MS.gene49681:intron | 25.0% |
| ! | TGGAATAATTTAGTAGTACA+TGG | - | chr4.4:8297436-8297455 | MS.gene49681:intron | 25.0% |
| ! | TTATAAATGGGATTACTCTA+TGG | - | chr4.4:8297100-8297119 | MS.gene49681:intron | 25.0% |
| ! | TTATTCACATTTGGTCATAT+AGG | + | chr4.4:8296441-8296460 | None:intergenic | 25.0% |
| ! | TTTAACCACTCTATATAATC+AGG | + | chr4.4:8295863-8295882 | None:intergenic | 25.0% |
| ! | TTTAGGTCTAATTAGTTGTT+TGG | - | chr4.4:8298925-8298944 | MS.gene49681:intron | 25.0% |
| ! | TTTGAATTATGAGAAACATC+TGG | - | chr4.4:8297416-8297435 | MS.gene49681:intron | 25.0% |
| !! | AATCATATCATAATTTTGGG+TGG | - | chr4.4:8298679-8298698 | MS.gene49681:intron | 25.0% |
| !! | TGTGATACTAAATCTCTTTT+TGG | - | chr4.4:8298050-8298069 | MS.gene49681:intron | 25.0% |
| !!! | ACATATATTTTTTTTGGTGG+TGG | + | chr4.4:8295700-8295719 | None:intergenic | 25.0% |
| !!! | ATGATCATTTTTTAGCATTG+CGG | - | chr4.4:8298518-8298537 | MS.gene49681:intron | 25.0% |
| !!! | TGATGGACTTAATAGTTATT+GGG | - | chr4.4:8296606-8296625 | MS.gene49681:intron | 25.0% |
| !!! | TGTTTCTTATTTTTCTCCTA+GGG | - | chr4.4:8298193-8298212 | MS.gene49681:intron | 25.0% |
| !!! | TGTTTGTTGTTTTTTCTGTA+TGG | - | chr4.4:8296820-8296839 | MS.gene49681:intron | 25.0% |
| !!! | TTATTTTGCTTCGTAATGTA+CGG | - | chr4.4:8297844-8297863 | MS.gene49681:intron | 25.0% |
| !!! | TTGATGGACTTAATAGTTAT+TGG | - | chr4.4:8296605-8296624 | MS.gene49681:intron | 25.0% |
| !!! | TTGATTTGTACTAGTGTTTA+GGG | - | chr4.4:8298417-8298436 | MS.gene49681:intron | 25.0% |
| !!! | TTGTTTCTTATTTTTCTCCT+AGG | - | chr4.4:8298192-8298211 | MS.gene49681:intron | 25.0% |
| AAACAACTTAAAAGTGGACA+AGG | + | chr4.4:8297258-8297277 | None:intergenic | 30.0% | |
| AAGTTGTTTGCTTGATTTCT+TGG | - | chr4.4:8297269-8297288 | MS.gene49681:intron | 30.0% | |
| AATAAGAAACAAGAGACAAG+AGG | + | chr4.4:8298184-8298203 | None:intergenic | 30.0% | |
| AATTTATATGCTCGCAGTAT+GGG | - | chr4.4:8299664-8299683 | MS.gene49681:intron | 30.0% | |
| AGAAGAAGATAAAAGGATTG+AGG | - | chr4.4:8297627-8297646 | MS.gene49681:intron | 30.0% | |
| AGCAAAATAATCTCCGTAAT+TGG | + | chr4.4:8297834-8297853 | None:intergenic | 30.0% | |
| AGTTGTTTGCTTGATTTCTT+GGG | - | chr4.4:8297270-8297289 | MS.gene49681:intron | 30.0% | |
| ATAATCAGGAACTAATTTGG+AGG | + | chr4.4:8295849-8295868 | None:intergenic | 30.0% | |
| ATATGAATAACAACTCATCC+AGG | + | chr4.4:8297309-8297328 | None:intergenic | 30.0% | |
| ATTATGATCAATCTCTACGA+AGG | - | chr4.4:8296059-8296078 | MS.gene49681:intron | 30.0% | |
| CACCTGTCTGAATTAATTAA+CGG | + | chr4.4:8299744-8299763 | None:intergenic | 30.0% | |
| GAAGAAGATAAAAGGATTGA+GGG | - | chr4.4:8297628-8297647 | MS.gene49681:intron | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr4.4:8295655-8295674 | MS.gene49681:intron | 30.0% | |
| GTCACCGAATTAATGTTTAA+TGG | - | chr4.4:8296781-8296800 | MS.gene49681:intron | 30.0% | |
| TAAGTCCATCAAAACAATCA+TGG | + | chr4.4:8296597-8296616 | None:intergenic | 30.0% | |
| TACCCTTAGCTATTTATTGT+GGG | + | chr4.4:8299536-8299555 | None:intergenic | 30.0% | |
| TAGTTCCTGATTATATAGAG+TGG | - | chr4.4:8295855-8295874 | MS.gene49681:intron | 30.0% | |
| TCAAGCAAACAACTTAAAAG+TGG | + | chr4.4:8297264-8297283 | None:intergenic | 30.0% | |
| TCATGAAATTCAACAACTGA+AGG | - | chr4.4:8295246-8295265 | MS.gene49681:intron | 30.0% | |
| TCCAAAAGTGACACTTAAAA+AGG | - | chr4.4:8299627-8299646 | MS.gene49681:intron | 30.0% | |
| TGAAATGTAGTCATTTGTGT+TGG | - | chr4.4:8297753-8297772 | MS.gene49681:intron | 30.0% | |
| TGAACTTGTCAATCAAATAG+AGG | - | chr4.4:8295038-8295057 | MS.gene49681:CDS | 30.0% | |
| TGATATAAGCTTGAAGTTTG+AGG | - | chr4.4:8298786-8298805 | MS.gene49681:intron | 30.0% | |
| TGGTATAAAACAACTTGCAA+GGG | + | chr4.4:8296943-8296962 | None:intergenic | 30.0% | |
| TGTAATATACTCTTGGTCAA+AGG | - | chr4.4:8297203-8297222 | MS.gene49681:intron | 30.0% | |
| TGTAGTTCAATTGAAAGGAA+GGG | - | chr4.4:8296723-8296742 | MS.gene49681:CDS | 30.0% | |
| TGTTAGTTAGATTCAAGATG+TGG | - | chr4.4:8295186-8295205 | MS.gene49681:intron | 30.0% | |
| TGTTTCAGCTGCAAAAATTT+CGG | - | chr4.4:8296641-8296660 | MS.gene49681:intron | 30.0% | |
| TTACCCTTAGCTATTTATTG+TGG | + | chr4.4:8299537-8299556 | None:intergenic | 30.0% | |
| TTATATGATATTTCAGCGAC+AGG | + | chr4.4:8297936-8297955 | None:intergenic | 30.0% | |
| TTCTTCTATACCACTTGTTT+GGG | - | chr4.4:8297355-8297374 | MS.gene49681:intron | 30.0% | |
| TTGGTATAAAACAACTTGCA+AGG | + | chr4.4:8296944-8296963 | None:intergenic | 30.0% | |
| ! | ATATGTCCTTTAGCTTACTT+AGG | + | chr4.4:8298616-8298635 | None:intergenic | 30.0% |
| ! | ATCAAATTAAGTGCTTTGAG+AGG | - | chr4.4:8295209-8295228 | MS.gene49681:intron | 30.0% |
| ! | CAAAACGAAGAATTTTCCAA+TGG | + | chr4.4:8298881-8298900 | None:intergenic | 30.0% |
| ! | GATGGACTTAATAGTTATTG+GGG | - | chr4.4:8296607-8296626 | MS.gene49681:intron | 30.0% |
| ! | TAAACATTAATTCGGTGACA+AGG | + | chr4.4:8296780-8296799 | None:intergenic | 30.0% |
| ! | TGAGTTTAGCTTATTTGGTA+GGG | - | chr4.4:8295748-8295767 | MS.gene49681:CDS | 30.0% |
| ! | TGATGGATGTAATATACTCT+TGG | - | chr4.4:8297196-8297215 | MS.gene49681:intron | 30.0% |
| ! | TTAGGAGCATAAAGTGTATA+TGG | + | chr4.4:8297959-8297978 | None:intergenic | 30.0% |
| ! | TTGCTAAAGTAGAAAGTGTA+TGG | - | chr4.4:8298816-8298835 | MS.gene49681:intron | 30.0% |
| ! | TTTTAGCAAACCTTATGCAT+AGG | + | chr4.4:8295090-8295109 | None:intergenic | 30.0% |
| ! | TTTTGCAACGTGAAATTACA+AGG | + | chr4.4:8298345-8298364 | None:intergenic | 30.0% |
| !! | AAGGTTTGCTAAAATGAATC+TGG | - | chr4.4:8295096-8295115 | MS.gene49681:intron | 30.0% |
| !! | AATGTGATGTTATTGGTCTT+TGG | - | chr4.4:8295138-8295157 | MS.gene49681:intron | 30.0% |
| !! | AGATCATTAAAAGTGCCTAA+TGG | + | chr4.4:8296900-8296919 | None:intergenic | 30.0% |
| !! | AGTCTATTTTGAAGACTACT+TGG | + | chr4.4:8298017-8298036 | None:intergenic | 30.0% |
| !! | ATCATTAAAAGTGCCTAATG+GGG | + | chr4.4:8296898-8296917 | None:intergenic | 30.0% |
| !! | GATCATTAAAAGTGCCTAAT+GGG | + | chr4.4:8296899-8296918 | None:intergenic | 30.0% |
| !! | GTTGATTTGTACTAGTGTTT+AGG | - | chr4.4:8298416-8298435 | MS.gene49681:intron | 30.0% |
| !! | TATCATAATTTTGGGTGGTT+TGG | - | chr4.4:8298684-8298703 | MS.gene49681:intron | 30.0% |
| !!! | ATTGAAGCTTCTAGTTTTCA+CGG | - | chr4.4:8299294-8299313 | MS.gene49681:intron | 30.0% |
| !!! | TCCTTTTTAAGTGTCACTTT+TGG | + | chr4.4:8299631-8299650 | None:intergenic | 30.0% |
| !!! | TGATTCCATGATTGTTTTGA+TGG | - | chr4.4:8296589-8296608 | MS.gene49681:CDS | 30.0% |
| AAATGAGCGGTTATTTGTAC+TGG | - | chr4.4:8298140-8298159 | MS.gene49681:intron | 35.0% | |
| AACAACTGAAGGCAAAAATG+CGG | - | chr4.4:8295257-8295276 | MS.gene49681:intron | 35.0% | |
| AACACAAGTTTGAGAAGAGT+TGG | - | chr4.4:8297572-8297591 | MS.gene49681:intron | 35.0% | |
| AATATCATCCTTTGAGTGCA+AGG | - | chr4.4:8296247-8296266 | MS.gene49681:intron | 35.0% | |
| ACAACTTAACATTTGATGGG+AGG | - | chr4.4:8296464-8296483 | MS.gene49681:intron | 35.0% | |
| ACCCTTAGCTATTTATTGTG+GGG | + | chr4.4:8299535-8299554 | None:intergenic | 35.0% | |
| ACTTGTAGCTCAGATTATCA+AGG | + | chr4.4:8298488-8298507 | None:intergenic | 35.0% | |
| AGTATGTCGAATCAACAGTA+AGG | - | chr4.4:8297166-8297185 | MS.gene49681:intron | 35.0% | |
| AGTTGAAGTATGGAACTGAA+TGG | - | chr4.4:8295346-8295365 | MS.gene49681:intron | 35.0% | |
| ATTGGAACGTGAAAAAAGGT+TGG | - | chr4.4:8299327-8299346 | MS.gene49681:intron | 35.0% | |
| CAATTTATATGCTCGCAGTA+TGG | - | chr4.4:8299663-8299682 | MS.gene49681:intron | 35.0% | |
| CAGACTATTCGGAATATTCT+TGG | - | chr4.4:8299150-8299169 | MS.gene49681:intron | 35.0% | |
| CATAATATATGCAAGGTTCG+AGG | - | chr4.4:8295783-8295802 | MS.gene49681:CDS | 35.0% | |
| CCTAATGATTATACCACACT+AGG | + | chr4.4:8299720-8299739 | None:intergenic | 35.0% | |
| CCTAGTGTGGTATAATCATT+AGG | - | chr4.4:8299717-8299736 | MS.gene49681:intron | 35.0% | |
| CGTTAATTAATTCAGACAGG+TGG | - | chr4.4:8299742-8299761 | MS.gene49681:CDS | 35.0% | |
| CTTCTTCTATACCACTTGTT+TGG | - | chr4.4:8297354-8297373 | MS.gene49681:intron | 35.0% | |
| CTTGTAGCTCAGATTATCAA+GGG | + | chr4.4:8298487-8298506 | None:intergenic | 35.0% | |
| GAAGCATAAATCACTCAAGT+TGG | - | chr4.4:8296146-8296165 | MS.gene49681:intron | 35.0% | |
| GACACTTAAAAAGGAACTGA+GGG | - | chr4.4:8299636-8299655 | MS.gene49681:intron | 35.0% | |
| GCGTAATTGTTAGAAACTCA+GGG | - | chr4.4:8296323-8296342 | MS.gene49681:intron | 35.0% | |
| GTCCGTTAATTAATTCAGAC+AGG | - | chr4.4:8299739-8299758 | MS.gene49681:CDS | 35.0% | |
| GTGCAGAAGTTAATTATCCA+GGG | - | chr4.4:8296269-8296288 | MS.gene49681:intron | 35.0% | |
| GTGTAGTTCAATTGAAAGGA+AGG | - | chr4.4:8296722-8296741 | MS.gene49681:CDS | 35.0% | |
| GTTGAAGTATGGAACTGAAT+GGG | - | chr4.4:8295347-8295366 | MS.gene49681:intron | 35.0% | |
| GTTTCAGCTGCAAAAATTTC+GGG | - | chr4.4:8296642-8296661 | MS.gene49681:intron | 35.0% | |
| GTTTGACCTAAGTAAGCTAA+AGG | - | chr4.4:8298607-8298626 | MS.gene49681:intron | 35.0% | |
| GTTTGATCATCCTATGCATA+AGG | - | chr4.4:8295077-8295096 | MS.gene49681:intron | 35.0% | |
| TAATCTCCGTAATTGGTTAG+AGG | + | chr4.4:8297827-8297846 | None:intergenic | 35.0% | |
| TAGTATCACAATCAACACAG+AGG | + | chr4.4:8298040-8298059 | None:intergenic | 35.0% | |
| TCCAGGTAGAAGAAGATAAA+AGG | - | chr4.4:8297620-8297639 | MS.gene49681:intron | 35.0% | |
| TCCCCACAATAAATAGCTAA+GGG | - | chr4.4:8299531-8299550 | MS.gene49681:intron | 35.0% | |
| TCTTGTAATGGTATGTGCAA+TGG | - | chr4.4:8299242-8299261 | MS.gene49681:intron | 35.0% | |
| TGACACTTAAAAAGGAACTG+AGG | - | chr4.4:8299635-8299654 | MS.gene49681:intron | 35.0% | |
| TGATTGTTAGCTGTTTGGAT+TGG | - | chr4.4:8297461-8297480 | MS.gene49681:intron | 35.0% | |
| TGCAATGGACAAAATTGTTG+TGG | - | chr4.4:8299257-8299276 | MS.gene49681:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr4.4:8295660-8295679 | MS.gene49681:intron | 35.0% | |
| TGCTCAGATGATTTCTCTAT+TGG | + | chr4.4:8296963-8296982 | None:intergenic | 35.0% | |
| TGGTTTGATTGTTAGCTGTT+TGG | - | chr4.4:8297456-8297475 | MS.gene49681:intron | 35.0% | |
| TGTAGTAAATAATGAGGCCT+AGG | + | chr4.4:8295304-8295323 | None:intergenic | 35.0% | |
| TTGTTCTTCTGCAGACTATT+CGG | - | chr4.4:8299139-8299158 | MS.gene49681:intron | 35.0% | |
| ! | ATATATAAGGGCATGCTCAA+GGG | + | chr4.4:8297700-8297719 | None:intergenic | 35.0% |
| ! | GTGAGTTTAGCTTATTTGGT+AGG | - | chr4.4:8295747-8295766 | MS.gene49681:CDS | 35.0% |
| ! | TATATATAAGGGCATGCTCA+AGG | + | chr4.4:8297701-8297720 | None:intergenic | 35.0% |
| ! | TCCTTTTATCTTCTTCTACC+TGG | + | chr4.4:8297624-8297643 | None:intergenic | 35.0% |
| ! | TTTTGAATCAGGTAACCACA+TGG | - | chr4.4:8298296-8298315 | MS.gene49681:intron | 35.0% |
| !! | ACTTGGTAATGAATCAAGAG+TGG | + | chr4.4:8298000-8298019 | None:intergenic | 35.0% |
| !! | TAACTAACAGCAAAGTGTTG+TGG | + | chr4.4:8295175-8295194 | None:intergenic | 35.0% |
| !!! | CCACATGGTTTTATTTTCGA+CGG | - | chr4.4:8298311-8298330 | MS.gene49681:intron | 35.0% |
| AAATGACTGACATCTTCGAG+GGG | - | chr4.4:8298239-8298258 | MS.gene49681:intron | 40.0% | |
| AACAGTAAGGCCATTCTTGA+TGG | - | chr4.4:8297179-8297198 | MS.gene49681:intron | 40.0% | |
| AACTAGTCAACCCAAACAAG+TGG | + | chr4.4:8297368-8297387 | None:intergenic | 40.0% | |
| AAGTATGCATGCATACACAC+TGG | - | chr4.4:8297910-8297929 | MS.gene49681:intron | 40.0% | |
| ACAACTGAAGGCAAAAATGC+GGG | - | chr4.4:8295258-8295277 | MS.gene49681:intron | 40.0% | |
| AGAATCCTTTGTCTGCATTG+GGG | - | chr4.4:8299791-8299810 | MS.gene49681:CDS | 40.0% | |
| ATATATACAGTGGCGTATCC+AGG | - | chr4.4:8295443-8295462 | MS.gene49681:intron | 40.0% | |
| ATATTCTTGGTTACTCTGGC+TGG | - | chr4.4:8299163-8299182 | MS.gene49681:intron | 40.0% | |
| ATCAGCAAAACTTGATCCCT+AGG | + | chr4.4:8298212-8298231 | None:intergenic | 40.0% | |
| ATGCACTCGAACATTTGTCA+TGG | + | chr4.4:8296508-8296527 | None:intergenic | 40.0% | |
| ATGCAGACAAAGGATTCTGA+AGG | + | chr4.4:8299789-8299808 | None:intergenic | 40.0% | |
| CAAAAATAATACCCCGTCGA+AGG | + | chr4.4:8299098-8299117 | None:intergenic | 40.0% | |
| CAAATGACTGACATCTTCGA+GGG | - | chr4.4:8298238-8298257 | MS.gene49681:intron | 40.0% | |
| CAGAATCCTTTGTCTGCATT+GGG | - | chr4.4:8299790-8299809 | MS.gene49681:CDS | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr4.4:8295662-8295681 | MS.gene49681:intron | 40.0% | |
| CATGAGTGGATGAAAATGAG+CGG | - | chr4.4:8298127-8298146 | MS.gene49681:intron | 40.0% | |
| CATTACAAGAGAACCCGAAA+AGG | + | chr4.4:8299232-8299251 | None:intergenic | 40.0% | |
| CCAAATAAGCTAAACTCACG+AGG | + | chr4.4:8295746-8295765 | None:intergenic | 40.0% | |
| CCGTCGAAAATAAAACCATG+TGG | + | chr4.4:8298314-8298333 | None:intergenic | 40.0% | |
| CGAAAAGGAATTGAGTGCAT+CGG | + | chr4.4:8299217-8299236 | None:intergenic | 40.0% | |
| CGGAATATTCTTGGTTACTC+TGG | - | chr4.4:8299159-8299178 | MS.gene49681:intron | 40.0% | |
| CTCCCCACAATAAATAGCTA+AGG | - | chr4.4:8299530-8299549 | MS.gene49681:intron | 40.0% | |
| CTGCATTGGAACGTGAAAAA+AGG | - | chr4.4:8299323-8299342 | MS.gene49681:intron | 40.0% | |
| GAATGATAGATGACCTAGTG+TGG | - | chr4.4:8299704-8299723 | MS.gene49681:intron | 40.0% | |
| GATAGAGCACGAATGCAAAT+TGG | - | chr4.4:8297128-8297147 | MS.gene49681:intron | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr4.4:8295661-8295680 | MS.gene49681:intron | 40.0% | |
| GCTAACTAGGAGTTGAAGTA+TGG | - | chr4.4:8295336-8295355 | MS.gene49681:intron | 40.0% | |
| GGCGTAATTGTTAGAAACTC+AGG | - | chr4.4:8296322-8296341 | MS.gene49681:intron | 40.0% | |
| GGTGCAGAAGTTAATTATCC+AGG | - | chr4.4:8296268-8296287 | MS.gene49681:intron | 40.0% | |
| TAGCACAACACATACTGTCT+TGG | + | chr4.4:8295375-8295394 | None:intergenic | 40.0% | |
| TCAAATGACTGACATCTTCG+AGG | - | chr4.4:8298237-8298256 | MS.gene49681:intron | 40.0% | |
| TCAGAATCCTTTGTCTGCAT+TGG | - | chr4.4:8299789-8299808 | MS.gene49681:CDS | 40.0% | |
| TCTACCACATGTAACAACCA+TGG | + | chr4.4:8297782-8297801 | None:intergenic | 40.0% | |
| TCTTCTACCTGGAATGTCAA+AGG | + | chr4.4:8297613-8297632 | None:intergenic | 40.0% | |
| TGGTCAAACAAGATGCAAGT+TGG | - | chr4.4:8296166-8296185 | MS.gene49681:intron | 40.0% | |
| TTGGAGAAATTACCTCAGCT+TGG | - | chr4.4:8296185-8296204 | MS.gene49681:intron | 40.0% | |
| TTGGGTGAAGTTTCTATTCC+TGG | - | chr4.4:8297288-8297307 | MS.gene49681:intron | 40.0% | |
| TTTCACGGTGAAAACTGCAT+TGG | - | chr4.4:8299309-8299328 | MS.gene49681:intron | 40.0% | |
| TTTCATCCACTCATGAACCA+AGG | + | chr4.4:8298122-8298141 | None:intergenic | 40.0% | |
| TTTGCATAAATCCTGCGTCT+AGG | + | chr4.4:8298099-8298118 | None:intergenic | 40.0% | |
| ! | AATCTAGCCTTTGACATTCC+AGG | - | chr4.4:8297603-8297622 | MS.gene49681:intron | 40.0% |
| ! | AGCTGTTTGGATTGGAAGTT+GGG | - | chr4.4:8297469-8297488 | MS.gene49681:intron | 40.0% |
| ! | CCTCGTGAGTTTAGCTTATT+TGG | - | chr4.4:8295743-8295762 | MS.gene49681:CDS | 40.0% |
| ! | CGATGCACTCAATTCCTTTT+CGG | - | chr4.4:8299215-8299234 | MS.gene49681:intron | 40.0% |
| ! | GATGCACTCAATTCCTTTTC+GGG | - | chr4.4:8299216-8299235 | MS.gene49681:intron | 40.0% |
| ! | GCTTGACGAGTTTTTGAATC+AGG | - | chr4.4:8298285-8298304 | MS.gene49681:intron | 40.0% |
| ! | TAGCTGTTTGGATTGGAAGT+TGG | - | chr4.4:8297468-8297487 | MS.gene49681:intron | 40.0% |
| ! | TCTCTACGAAGGTCTCATTT+TGG | - | chr4.4:8296070-8296089 | MS.gene49681:intron | 40.0% |
| ! | TTCATTTTCCCTTCCCCATT+AGG | - | chr4.4:8296882-8296901 | MS.gene49681:intron | 40.0% |
| ! | TTTCTCTATTTTGCACACCC+TGG | + | chr4.4:8296289-8296308 | None:intergenic | 40.0% |
| !! | TAAAAGTGCCTAATGGGGAA+GGG | + | chr4.4:8296893-8296912 | None:intergenic | 40.0% |
| !! | TTAAAAGTGCCTAATGGGGA+AGG | + | chr4.4:8296894-8296913 | None:intergenic | 40.0% |
| !!! | CTTTTCGGGTTCTCTTGTAA+TGG | - | chr4.4:8299230-8299249 | MS.gene49681:intron | 40.0% |
| AAGGAATTGAGTGCATCGGA+TGG | + | chr4.4:8299213-8299232 | None:intergenic | 45.0% | |
| AAGGTTCGAGGTTCAAACTC+CGG | - | chr4.4:8295795-8295814 | MS.gene49681:intron | 45.0% | |
| AGAGCACGAATGCAAATTGG+AGG | - | chr4.4:8297131-8297150 | MS.gene49681:intron | 45.0% | |
| AGCTTCAAGACAGTGCAAGA+AGG | - | chr4.4:8297021-8297040 | MS.gene49681:intron | 45.0% | |
| AGGAATTGAGTGCATCGGAT+GGG | + | chr4.4:8299212-8299231 | None:intergenic | 45.0% | |
| ATCACATTTGCACCAAGCTG+AGG | + | chr4.4:8296200-8296219 | None:intergenic | 45.0% | |
| CCAGAGCCTCTAACCAATTA+CGG | - | chr4.4:8297818-8297837 | MS.gene49681:intron | 45.0% | |
| CCTAGGCAAAGTCAATACCT+GGG | + | chr4.4:8295287-8295306 | None:intergenic | 45.0% | |
| CGCAGGATTTATGCAAACCT+TGG | - | chr4.4:8298102-8298121 | MS.gene49681:intron | 45.0% | |
| CTGTCTTGAAGCTGTTGTAG+AGG | + | chr4.4:8297014-8297033 | None:intergenic | 45.0% | |
| GTATCATTAGGGCAGCTAGA+AGG | - | chr4.4:8298263-8298282 | MS.gene49681:intron | 45.0% | |
| GTTGCCATGGTTGTTACATG+TGG | - | chr4.4:8297775-8297794 | MS.gene49681:intron | 45.0% | |
| TCAATCCCCAATGCAGACAA+AGG | + | chr4.4:8299799-8299818 | None:intergenic | 45.0% | |
| TCGCGAGTCTTAAAGAAGCT+TGG | - | chr4.4:8296682-8296701 | MS.gene49681:CDS | 45.0% | |
| TGCAAACCTTGGTTCATGAG+TGG | - | chr4.4:8298113-8298132 | MS.gene49681:intron | 45.0% | |
| TGCTCCTAAACACACACACA+CGG | - | chr4.4:8297970-8297989 | MS.gene49681:intron | 45.0% | |
| TGGAAGTTGGGGATTGTAGT+TGG | - | chr4.4:8297481-8297500 | MS.gene49681:intron | 45.0% | |
| ! | GATTCTGAAGGTAGACGTAC+AGG | + | chr4.4:8299777-8299796 | None:intergenic | 45.0% |
| ! | GCTGTTTGGATTGGAAGTTG+GGG | - | chr4.4:8297470-8297489 | MS.gene49681:intron | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr4.4:8295633-8295652 | MS.gene49681:intron | 45.0% |
| ! | TTAGAGGTGGTTTGGATCAG+CGG | + | chr4.4:8299356-8299375 | None:intergenic | 45.0% |
| !! | CTTCGAGGGGAGTATCATTA+GGG | - | chr4.4:8298252-8298271 | MS.gene49681:intron | 45.0% |
| !! | GTCATTTGTGTTGGTTGCCA+TGG | - | chr4.4:8297762-8297781 | MS.gene49681:intron | 45.0% |
| !! | TCTTCGAGGGGAGTATCATT+AGG | - | chr4.4:8298251-8298270 | MS.gene49681:intron | 45.0% |
| !!! | ATTTTTTTTGGTGGTGGCCG+AGG | + | chr4.4:8295694-8295713 | None:intergenic | 45.0% |
| !! | ATATATATATATATATATAC+AGG | + | chr4.4:8295450-8295431 | None:intergenic | 5.0% |
| !! | TATATATATATATATATACA+GGG | + | chr4.4:8295451-8295432 | None:intergenic | 5.0% |
| !! | TATATATATATATATTCAAT+TGG | - | chr4.4:8295567-8295586 | MS.gene49681:intron | 5.0% |
| !! | TTTCTATTTATTATATATAA+GGG | + | chr4.4:8297712-8297731 | None:intergenic | 5.0% |
| !!! | TAATATACATATATTTTTTT+TGG | + | chr4.4:8295706-8295725 | None:intergenic | 5.0% |
| !!! | TACATTAAATTTTTTTTTTT+TGG | + | chr4.4:8295824-8295843 | None:intergenic | 5.0% |
| !!! | TTTTCTATTTATTATATATA+AGG | + | chr4.4:8297713-8297732 | None:intergenic | 5.0% |
| !!! | TTTTGAATTAAATTATAAAT+GGG | - | chr4.4:8297088-8297107 | MS.gene49681:intron | 5.0% |
| !!! | TTTTTGAATTAAATTATAAA+TGG | - | chr4.4:8297087-8297106 | MS.gene49681:intron | 5.0% |
| AGCGAATGAAAGCCTTCGAC+GGG | - | chr4.4:8299083-8299102 | MS.gene49681:intron | 50.0% | |
| ATATATACAGGGGCGGACCT+AGG | + | chr4.4:8296375-8296394 | None:intergenic | 50.0% | |
| ATCGCCTGTGTCAATCAAGC+AGG | + | chr4.4:8296752-8296771 | None:intergenic | 50.0% | |
| CAAGGGCAGCAACTTGATGA+TGG | + | chr4.4:8296926-8296945 | None:intergenic | 50.0% | |
| CAGACCGTGTGTGTGTGTTT+AGG | + | chr4.4:8297977-8297996 | None:intergenic | 50.0% | |
| CAGCGAATGAAAGCCTTCGA+CGG | - | chr4.4:8299082-8299101 | MS.gene49681:intron | 50.0% | |
| CAGTGCAAGAAGGATAGCAG+AGG | - | chr4.4:8297031-8297050 | MS.gene49681:intron | 50.0% | |
| CATGTAGACATCCTAGACGC+AGG | - | chr4.4:8298085-8298104 | MS.gene49681:intron | 50.0% | |
| CCGTAATTGGTTAGAGGCTC+TGG | + | chr4.4:8297821-8297840 | None:intergenic | 50.0% | |
| CTTCTGCACCTTGCACTCAA+AGG | + | chr4.4:8296258-8296277 | None:intergenic | 50.0% | |
| GCCTAGGCAAAGTCAATACC+TGG | + | chr4.4:8295288-8295307 | None:intergenic | 50.0% | |
| TCTTGGTTACTCTGGCTGGT+GGG | - | chr4.4:8299167-8299186 | MS.gene49681:intron | 50.0% | |
| TGCAGTTGGAGAAGCTGACT+TGG | - | chr4.4:8299044-8299063 | MS.gene49681:intron | 50.0% | |
| TTCTTGGTTACTCTGGCTGG+TGG | - | chr4.4:8299166-8299185 | MS.gene49681:intron | 50.0% | |
| !! | CCCAGGTATTGACTTTGCCT+AGG | - | chr4.4:8295284-8295303 | MS.gene49681:intron | 50.0% |
| AAGGTCCGGGGTTCAAACCT+CGG | - | chr4.4:8295674-8295693 | MS.gene49681:intron | 55.0% | |
| AGCAGCACGCAACTGGAAAG+AGG | + | chr4.4:8299019-8299038 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr4.4:8295631-8295650 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr4.4:8295628-8295647 | MS.gene49681:intron | 55.0% | |
| CTTGGTTACTCTGGCTGGTG+GGG | - | chr4.4:8299168-8299187 | MS.gene49681:intron | 55.0% | |
| GCACACTCTCACCAACACCT+AGG | - | chr4.4:8296355-8296374 | MS.gene49681:intron | 55.0% | |
| GCAGCCTGCTTGATTGACAC+AGG | - | chr4.4:8296745-8296764 | MS.gene49681:intron | 55.0% | |
| GCGAATGAAAGCCTTCGACG+GGG | - | chr4.4:8299084-8299103 | MS.gene49681:intron | 55.0% | |
| GTATCCAGGACCCTAGGTCA+GGG | - | chr4.4:8295457-8295476 | MS.gene49681:intron | 55.0% | |
| GTGCATCGGATGGGATGTGA+AGG | + | chr4.4:8299203-8299222 | None:intergenic | 55.0% | |
| TATCCAGGACCCTAGGTCAG+GGG | - | chr4.4:8295458-8295477 | MS.gene49681:intron | 55.0% | |
| AAGTTCGCACCCCCTGACCT+AGG | + | chr4.4:8295471-8295490 | None:intergenic | 60.0% | |
| AGTGGCGTATCCAGGACCCT+AGG | - | chr4.4:8295451-8295470 | MS.gene49681:intron | 60.0% | |
| AGTTCGCACCCCCTGACCTA+GGG | + | chr4.4:8295470-8295489 | None:intergenic | 60.0% | |
| ATCCAGGACCCTAGGTCAGG+GGG | - | chr4.4:8295459-8295478 | MS.gene49681:intron | 60.0% | |
| CATCAGCAGCAGCACGCAAC+TGG | + | chr4.4:8299026-8299045 | None:intergenic | 60.0% | |
| CGTATCCAGGACCCTAGGTC+AGG | - | chr4.4:8295456-8295475 | MS.gene49681:intron | 60.0% | |
| GGCAAAAATGCGGGACTCCC+AGG | - | chr4.4:8295267-8295286 | MS.gene49681:intron | 60.0% | |
| ! | CGTGCTGCTGCTGATGCAGT+TGG | - | chr4.4:8299030-8299049 | MS.gene49681:intron | 60.0% |
| ! | GAGGTGGTTTGGATCAGCGG+TGG | + | chr4.4:8299353-8299372 | None:intergenic | 60.0% |
| ACAGGGGCGGACCTAGGTGT+TGG | + | chr4.4:8296369-8296388 | None:intergenic | 65.0% | |
| GGTGGCCGAGGTTTGAACCC+CGG | + | chr4.4:8295682-8295701 | None:intergenic | 65.0% | |
| GGTTACTCTGGCTGGTGGGG+CGG | - | chr4.4:8299171-8299190 | MS.gene49681:intron | 65.0% | |
| CACCCCCTGACCTAGGGTCC+TGG | + | chr4.4:8295464-8295483 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 8295012 | 8299818 | 8295012 | ID=MS.gene49681 |
| chr4.4 | mRNA | 8295012 | 8299818 | 8295012 | ID=MS.gene49681.t1;Parent=MS.gene49681 |
| chr4.4 | exon | 8299732 | 8299818 | 8299732 | ID=MS.gene49681.t1.exon1;Parent=MS.gene49681.t1 |
| chr4.4 | CDS | 8299732 | 8299818 | 8299732 | ID=cds.MS.gene49681.t1;Parent=MS.gene49681.t1 |
| chr4.4 | exon | 8299542 | 8299634 | 8299542 | ID=MS.gene49681.t1.exon2;Parent=MS.gene49681.t1 |
| chr4.4 | CDS | 8299542 | 8299634 | 8299542 | ID=cds.MS.gene49681.t1;Parent=MS.gene49681.t1 |
| chr4.4 | exon | 8296665 | 8296748 | 8296665 | ID=MS.gene49681.t1.exon3;Parent=MS.gene49681.t1 |
| chr4.4 | CDS | 8296665 | 8296748 | 8296665 | ID=cds.MS.gene49681.t1;Parent=MS.gene49681.t1 |
| chr4.4 | exon | 8296524 | 8296616 | 8296524 | ID=MS.gene49681.t1.exon4;Parent=MS.gene49681.t1 |
| chr4.4 | CDS | 8296524 | 8296616 | 8296524 | ID=cds.MS.gene49681.t1;Parent=MS.gene49681.t1 |
| chr4.4 | exon | 8295725 | 8295803 | 8295725 | ID=MS.gene49681.t1.exon5;Parent=MS.gene49681.t1 |
| chr4.4 | CDS | 8295725 | 8295803 | 8295725 | ID=cds.MS.gene49681.t1;Parent=MS.gene49681.t1 |
| chr4.4 | exon | 8295012 | 8295091 | 8295012 | ID=MS.gene49681.t1.exon6;Parent=MS.gene49681.t1 |
| chr4.4 | CDS | 8295012 | 8295091 | 8295012 | ID=cds.MS.gene49681.t1;Parent=MS.gene49681.t1 |
| Gene Sequence |
| Protein sequence |
