Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50792.t1 | XP_003604737.1 | 98.4 | 607 | 10 | 0 | 1 | 607 | 1 | 607 | 0.00E+00 | 1211.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50792.t1 | Q9M040 | 83.1 | 608 | 97 | 3 | 1 | 607 | 1 | 603 | 1.2e-300 | 1033.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50792.t1 | G7JQ58 | 98.4 | 607 | 10 | 0 | 1 | 607 | 1 | 607 | 0.0e+00 | 1211.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50792 | MS.gene81954 | PPI |
| MS.gene50792 | MS.gene02651 | PPI |
| MS.gene50792 | MS.gene013671 | PPI |
| MS.gene50792 | MS.gene81956 | PPI |
| MS.gene50792 | MS.gene013678 | PPI |
| MS.gene50792 | MS.gene26127 | PPI |
| MS.gene50792 | MS.gene02488 | PPI |
| MS.gene50792 | MS.gene017382 | PPI |
| MS.gene50792 | MS.gene02654 | PPI |
| MS.gene50792 | MS.gene33522 | PPI |
| MS.gene50792 | MS.gene064505 | PPI |
| MS.gene50792 | MS.gene02655 | PPI |
| MS.gene50792 | MS.gene81957 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50792.t1 | MTR_4g017200 | 98.353 | 607 | 10 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1239 |
| MS.gene50792.t1 | MTR_5g046610 | 98.188 | 607 | 11 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1237 |
| MS.gene50792.t1 | MTR_7g069540 | 84.868 | 608 | 88 | 3 | 1 | 607 | 1 | 605 | 0.0 | 1058 |
| MS.gene50792.t1 | MTR_7g069500 | 81.713 | 607 | 79 | 5 | 1 | 607 | 1 | 575 | 0.0 | 1002 |
| MS.gene50792.t1 | MTR_2g015560 | 78.920 | 574 | 121 | 0 | 34 | 607 | 9 | 582 | 0.0 | 962 |
| MS.gene50792.t1 | MTR_2g009330 | 69.258 | 566 | 173 | 1 | 40 | 604 | 44 | 609 | 0.0 | 863 |
| MS.gene50792.t1 | MTR_5g046620 | 54.772 | 241 | 32 | 4 | 237 | 476 | 1 | 165 | 5.82e-73 | 231 |
| MS.gene50792.t1 | MTR_1g011530 | 70.175 | 57 | 14 | 1 | 353 | 409 | 31 | 84 | 3.91e-22 | 91.7 |
| MS.gene50792.t1 | MTR_2g013120 | 22.421 | 504 | 351 | 15 | 51 | 533 | 88 | 572 | 4.33e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50792.t1 | AT5G01320 | 82.867 | 607 | 100 | 2 | 1 | 607 | 1 | 603 | 0.0 | 1060 |
| MS.gene50792.t1 | AT4G33070 | 81.773 | 609 | 107 | 4 | 1 | 607 | 1 | 607 | 0.0 | 1047 |
| MS.gene50792.t1 | AT5G54960 | 81.773 | 609 | 107 | 2 | 1 | 607 | 1 | 607 | 0.0 | 1046 |
| MS.gene50792.t1 | AT5G01330 | 82.462 | 593 | 100 | 3 | 17 | 607 | 2 | 592 | 0.0 | 1018 |
| MS.gene50792.t1 | AT5G17380 | 22.441 | 508 | 310 | 18 | 51 | 513 | 18 | 486 | 1.30e-16 | 84.0 |
| MS.gene50792.t1 | AT3G48560 | 21.920 | 552 | 366 | 17 | 51 | 564 | 103 | 627 | 5.84e-14 | 75.5 |
Find 156 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCCTAATTCTAATGATTT+TGG | 0.114847 | 4.1:-80323809 | MS.gene50792:CDS |
| AACATTTCATTGGAACGTTT+TGG | 0.238749 | 4.1:-80322501 | MS.gene50792:CDS |
| TACTTTGGAGACAAGGAAAA+TGG | 0.246632 | 4.1:+80322811 | None:intergenic |
| CTGCTTATGAGAATTATTTC+AGG | 0.247181 | 4.1:-80322243 | MS.gene50792:CDS |
| TCTGAAGTTCATTGAGGATT+AGG | 0.283816 | 4.1:+80320998 | None:intergenic |
| AAGCATAAGCAATCTTTCTT+TGG | 0.284489 | 4.1:+80321106 | None:intergenic |
| CTATTATTGTTCAGCCTGAT+AGG | 0.293661 | 4.1:-80322354 | MS.gene50792:CDS |
| AGAATTCTTCATCATACTAT+TGG | 0.294152 | 4.1:-80323779 | MS.gene50792:CDS |
| CATTGGCGATGGAAGTTTCC+AGG | 0.298159 | 4.1:-80321710 | MS.gene50792:intron |
| GTCCCAAAATCATTAGAATT+AGG | 0.303299 | 4.1:+80323806 | None:intergenic |
| CAAAAGATTAATTACCTTAG+TGG | 0.314883 | 4.1:+80321333 | None:intergenic |
| TGAAAATAGGTCCAGCAAAT+AGG | 0.336734 | 4.1:+80322425 | None:intergenic |
| GCTTTCGCTACTCTTAGTTT+TGG | 0.343206 | 4.1:+80322613 | None:intergenic |
| TGGTTATGCTCAAGCTGTTC+CGG | 0.343868 | 4.1:-80321752 | MS.gene50792:CDS |
| ACTACTTACCCACATCCTTT+TGG | 0.344681 | 4.1:+80322064 | None:intergenic |
| GATTTCATCGGCAAACCTTC+AGG | 0.345985 | 4.1:+80322211 | None:intergenic |
| TTTCCAATCACAACCCTATC+AGG | 0.350187 | 4.1:+80322340 | None:intergenic |
| CAGCTTATGCTTATGTAAAC+AGG | 0.355575 | 4.1:+80322880 | None:intergenic |
| TATGAGTTCCAGATGCAATA+TGG | 0.362998 | 4.1:-80321805 | MS.gene50792:CDS |
| CAGATGCAATATGGTTCAAT+TGG | 0.366605 | 4.1:-80321796 | MS.gene50792:CDS |
| GAGGATCACAAACATTTCAT+TGG | 0.372783 | 4.1:-80322511 | MS.gene50792:CDS |
| CAGTTCTTAATCACATTGTA+TGG | 0.381671 | 4.1:+80321409 | None:intergenic |
| GAACTGTAATCATTGAAAAT+AGG | 0.384366 | 4.1:+80322412 | None:intergenic |
| ATTGGAAATGGGCCTACATT+TGG | 0.385767 | 4.1:-80322325 | MS.gene50792:CDS |
| GCTGATGCATACCTATTTGC+TGG | 0.395610 | 4.1:-80322436 | MS.gene50792:CDS |
| GAAGCTAGGGATTGGGTTGA+AGG | 0.395680 | 4.1:+80324130 | None:intergenic |
| CTGATGGTTATGCAAGGTCT+AGG | 0.408121 | 4.1:-80323937 | MS.gene50792:CDS |
| GATAGGGTTGTGATTGGAAA+TGG | 0.414596 | 4.1:-80322337 | MS.gene50792:CDS |
| TCAGCTTCGGTTCCGCGATC+AGG | 0.414869 | 4.1:+80324002 | None:intergenic |
| CTGAACCTAGAGAGCCTTTG+AGG | 0.417588 | 4.1:-80322189 | MS.gene50792:CDS |
| CAATTGAACCATATTGCATC+TGG | 0.423310 | 4.1:+80321797 | None:intergenic |
| TCTGGAAACACCTAAGTTCC+TGG | 0.424227 | 4.1:+80323741 | None:intergenic |
| GGCTACTAGTACTGGTTTCA+CGG | 0.424604 | 4.1:+80322639 | None:intergenic |
| TTGCCAGTGATTTGTATTGT+TGG | 0.427170 | 4.1:-80323833 | MS.gene50792:CDS |
| CAAGCAATCACTCGCTTCTC+CGG | 0.431538 | 4.1:+80321733 | None:intergenic |
| AGCGTGATTAATGCAATTGC+TGG | 0.431744 | 4.1:-80323872 | MS.gene50792:CDS |
| TAGCAAAGAGTTGCTTGAAT+GGG | 0.434683 | 4.1:-80321053 | MS.gene50792:CDS |
| GAAGCAATTCAGACAGCAAC+AGG | 0.436338 | 4.1:-80321130 | MS.gene50792:CDS |
| TTCAGATGAAGCTAGGGATT+GGG | 0.437372 | 4.1:+80324123 | None:intergenic |
| AGTTGCTTGAATGGGGATCA+AGG | 0.443953 | 4.1:-80321045 | MS.gene50792:CDS |
| CTGAAATTGCCAAAAGGATG+TGG | 0.445246 | 4.1:-80322073 | MS.gene50792:CDS |
| TTGGAAATGGGCCTACATTT+GGG | 0.447153 | 4.1:-80322324 | MS.gene50792:CDS |
| TTCAATGATTACAGTTCTGT+TGG | 0.449416 | 4.1:-80322406 | MS.gene50792:CDS |
| CTAGCAAAGAGTTGCTTGAA+TGG | 0.452164 | 4.1:-80321054 | MS.gene50792:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.454455 | 4.1:-80321772 | MS.gene50792:CDS |
| TTGTGCCGAGATTGTGGAAT+CGG | 0.455522 | 4.1:-80322458 | MS.gene50792:CDS |
| TGATGGTTATGCAAGGTCTA+GGG | 0.455953 | 4.1:-80323936 | MS.gene50792:CDS |
| CTAAGTTCCTGGCTAAAATC+AGG | 0.456762 | 4.1:+80323752 | None:intergenic |
| ATTCAGATGAAGCTAGGGAT+TGG | 0.458364 | 4.1:+80324122 | None:intergenic |
| GGAGACAAGGAAAATGGAAC+AGG | 0.460250 | 4.1:+80322817 | None:intergenic |
| GGCAGCAGTGGAAGCAGCTG+CGG | 0.462599 | 4.1:-80322677 | MS.gene50792:CDS |
| CCAGACTGTTACTTGCTACC+AGG | 0.464384 | 4.1:-80323723 | MS.gene50792:intron |
| GAACTGGAATTACACTGCCT+TGG | 0.471453 | 4.1:-80321392 | MS.gene50792:CDS |
| CATTGAGGTGATTGTTCACA+AGG | 0.471803 | 4.1:-80321083 | MS.gene50792:CDS |
| ATGAAATGTTTGTGATCCTC+AGG | 0.472515 | 4.1:+80322514 | None:intergenic |
| ATTGTTAATCAAGAAGATTA+TGG | 0.473966 | 4.1:+80321468 | None:intergenic |
| CAGTGATTTGTATTGTTGGT+GGG | 0.474712 | 4.1:-80323829 | MS.gene50792:CDS |
| CAATGTCAGGTTGAAGTCAC+CGG | 0.476652 | 4.1:+80324033 | None:intergenic |
| TTATGCAAGGTCTAGGGGTG+TGG | 0.478805 | 4.1:-80323930 | MS.gene50792:CDS |
| TTTGGACCGGCTACTAGTAC+TGG | 0.479924 | 4.1:+80322631 | None:intergenic |
| TATGCAAGGTCTAGGGGTGT+GGG | 0.481246 | 4.1:-80323929 | MS.gene50792:CDS |
| CATACAATGTGATTAAGAAC+TGG | 0.481258 | 4.1:-80321408 | MS.gene50792:CDS |
| GTTGTTACATTTACTGTTGG+TGG | 0.484165 | 4.1:-80323899 | MS.gene50792:CDS |
| TTAACCCTCAAAGGCTCTCT+AGG | 0.484853 | 4.1:+80322184 | None:intergenic |
| ATTGAGTAATCCAATGGGAT+TGG | 0.486444 | 4.1:-80322701 | MS.gene50792:CDS |
| ACTGCTGCCTCCAATCCCAT+TGG | 0.487915 | 4.1:+80322691 | None:intergenic |
| CCTGGTAGCAAGTAACAGTC+TGG | 0.488780 | 4.1:+80323723 | None:intergenic |
| CTTCCACTAGTCGTCGGGCT+AGG | 0.488846 | 4.1:+80324083 | None:intergenic |
| ACAGGTTCACGGCTGAAAGT+AGG | 0.491232 | 4.1:+80322835 | None:intergenic |
| TTGCCGAGACAGGAGACTCT+TGG | 0.496864 | 4.1:-80322111 | MS.gene50792:CDS |
| AAGCTAGGGATTGGGTTGAA+GGG | 0.497192 | 4.1:+80324131 | None:intergenic |
| TCACATTGTATGGTCCATCA+TGG | 0.497871 | 4.1:+80321419 | None:intergenic |
| TGCTGTAACGAACTGAATGC+CGG | 0.499481 | 4.1:-80323968 | MS.gene50792:CDS |
| CAGGTTCACGGCTGAAAGTA+GGG | 0.500437 | 4.1:+80322836 | None:intergenic |
| ACAATGGTCAAGGAAATTGC+TGG | 0.500572 | 4.1:-80321357 | MS.gene50792:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.502043 | 4.1:-80321792 | MS.gene50792:CDS |
| CCAGTGATTTGTATTGTTGG+TGG | 0.502339 | 4.1:-80323830 | MS.gene50792:CDS |
| CAGCCTGATAGGGTTGTGAT+TGG | 0.502630 | 4.1:-80322343 | MS.gene50792:CDS |
| TCAGGTGGTCGAGCAATGTC+AGG | 0.505825 | 4.1:+80324020 | None:intergenic |
| GTCGGGCTAGGTGACTGCCT+AGG | 0.506771 | 4.1:+80324095 | None:intergenic |
| ACTGCTGTTATTGCCGAGAC+AGG | 0.508047 | 4.1:-80322121 | MS.gene50792:CDS |
| AGCAATTTCCTTGACCATTG+TGG | 0.508734 | 4.1:+80321359 | None:intergenic |
| GCAGATGGCATGACAGAATA+CGG | 0.509599 | 4.1:+80322550 | None:intergenic |
| GGGTTGATTCAGATGAAGCT+AGG | 0.509627 | 4.1:+80324116 | None:intergenic |
| TCTGTCATGCCATCTGCTAA+AGG | 0.510996 | 4.1:-80322544 | MS.gene50792:CDS |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 4.1:-80321784 | MS.gene50792:CDS |
| TATTATTGTTCAGCCTGATA+GGG | 0.516594 | 4.1:-80322353 | MS.gene50792:CDS |
| ATAACCATCAGCAGCATATC+CGG | 0.517807 | 4.1:+80323949 | None:intergenic |
| AGGAAAATGGAACAGGTTCA+CGG | 0.519353 | 4.1:+80322824 | None:intergenic |
| ACCGACTTCCACTAGTCGTC+GGG | 0.522284 | 4.1:+80324078 | None:intergenic |
| TGAACCTAGAGAGCCTTTGA+GGG | 0.523049 | 4.1:-80322188 | MS.gene50792:CDS |
| TAAATTTCTGAAGTTCATTG+AGG | 0.523185 | 4.1:+80320992 | None:intergenic |
| TGACAGATTGAGTAATCCAA+TGG | 0.525959 | 4.1:-80322707 | MS.gene50792:intron |
| TCGGGCTAGGTGACTGCCTA+GGG | 0.525974 | 4.1:+80324096 | None:intergenic |
| TGCATGTTTCGAGGGATCCT+AGG | 0.526745 | 4.1:+80324221 | None:intergenic |
| GACAGATTGAGTAATCCAAT+GGG | 0.528687 | 4.1:-80322706 | MS.gene50792:intron |
| ATAACAACACCTTCATCAAA+CGG | 0.529906 | 4.1:-80324178 | MS.gene50792:CDS |
| TGTGTTGTTACATTTACTGT+TGG | 0.530399 | 4.1:-80323902 | MS.gene50792:CDS |
| AGCTAGGGATTGGGTTGAAG+GGG | 0.531081 | 4.1:+80324132 | None:intergenic |
| AGGAAATTGCTGGACCACTA+AGG | 0.533010 | 4.1:-80321347 | MS.gene50792:intron |
| TTCATTGAGGATTAGGAGGA+CGG | 0.533905 | 4.1:+80321005 | None:intergenic |
| ATAGGCTGTGGTCAACAACT+TGG | 0.534954 | 4.1:-80322959 | MS.gene50792:intron |
| ACCGACATCTTCACCGTCCC+CGG | 0.536179 | 4.1:-80324052 | MS.gene50792:CDS |
| GAGTAATCCAATGGGATTGG+AGG | 0.536971 | 4.1:-80322698 | MS.gene50792:CDS |
| CAAAAGCTGAAATTGCCAAA+AGG | 0.537401 | 4.1:-80322079 | MS.gene50792:CDS |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.537832 | 4.1:-80321727 | MS.gene50792:CDS |
| GGAATTAGTCCTTTAGCAGA+TGG | 0.539613 | 4.1:+80322535 | None:intergenic |
| TCACCTAGCCCGACGACTAG+TGG | 0.542677 | 4.1:-80324086 | MS.gene50792:CDS |
| ATCTTCTTGATTAACAATGG+TGG | 0.543934 | 4.1:-80321463 | MS.gene50792:CDS |
| AAGCAGTATTGTTCCTCGTA+AGG | 0.547454 | 4.1:+80322260 | None:intergenic |
| ATCAGCCGATTCCACAATCT+CGG | 0.548115 | 4.1:+80322453 | None:intergenic |
| GAAGTTCATTGAGGATTAGG+AGG | 0.551035 | 4.1:+80321001 | None:intergenic |
| AAAAGAACATTAACCCTCAA+AGG | 0.553752 | 4.1:+80322175 | None:intergenic |
| AATGGGATTGGAGGCAGCAG+TGG | 0.555789 | 4.1:-80322689 | MS.gene50792:CDS |
| GTTGCTTGAATGGGGATCAA+GGG | 0.556008 | 4.1:-80321044 | MS.gene50792:CDS |
| ATTGAAGTTGAAATCCATGA+TGG | 0.557098 | 4.1:-80321433 | MS.gene50792:CDS |
| ATGGTGATTTGCATGTTTCG+AGG | 0.558956 | 4.1:+80324212 | None:intergenic |
| GGTTGATTCAGATGAAGCTA+GGG | 0.561038 | 4.1:+80324117 | None:intergenic |
| ATAGGGTTGTGATTGGAAAT+GGG | 0.563741 | 4.1:-80322336 | MS.gene50792:CDS |
| AAACCAAGAGTCTCCTGTCT+CGG | 0.566323 | 4.1:+80322108 | None:intergenic |
| GTGATTGCTTGCATTGGCGA+TGG | 0.569686 | 4.1:-80321721 | MS.gene50792:CDS |
| AATGTCAGGTTGAAGTCACC+GGG | 0.569937 | 4.1:+80324034 | None:intergenic |
| TGGTGATTTGCATGTTTCGA+GGG | 0.571332 | 4.1:+80324213 | None:intergenic |
| CGCTTGCAAAGCGCCTTACG+AGG | 0.571441 | 4.1:-80322273 | MS.gene50792:CDS |
| AGATTGCTTATGCTTCATTG+AGG | 0.577157 | 4.1:-80321098 | MS.gene50792:CDS |
| GATGCTATCCACAATGGTCA+AGG | 0.577985 | 4.1:-80321367 | MS.gene50792:CDS |
| GAAACAGTGCCGTTTGATGA+AGG | 0.578220 | 4.1:+80324169 | None:intergenic |
| ATAATCTTCTTGATTAACAA+TGG | 0.579911 | 4.1:-80321466 | MS.gene50792:CDS |
| GTTGTTATTATGTCGTTGCA+TGG | 0.581178 | 4.1:+80324193 | None:intergenic |
| CCACCAACAATACAAATCAC+TGG | 0.581447 | 4.1:+80323830 | None:intergenic |
| CAGGTTGAAGTCACCGGGGA+CGG | 0.591017 | 4.1:+80324039 | None:intergenic |
| TCTCTAGGTTCAGATTTCAT+CGG | 0.593005 | 4.1:+80322199 | None:intergenic |
| GCTTCATCTGAATCAACCCT+AGG | 0.593184 | 4.1:-80324112 | MS.gene50792:CDS |
| TACCGACTTCCACTAGTCGT+CGG | 0.594116 | 4.1:+80324077 | None:intergenic |
| CTGTCCACATCTCAGCATTG+TGG | 0.594204 | 4.1:+80321495 | None:intergenic |
| GCTGAAAGTAGGGTGAGGAA+TGG | 0.602836 | 4.1:+80322846 | None:intergenic |
| ATCAAAACACACCCAAATGT+AGG | 0.603615 | 4.1:+80322313 | None:intergenic |
| GCTTCGGTTCCGCGATCAGG+TGG | 0.605721 | 4.1:+80324005 | None:intergenic |
| AAAATCTTACTTTGGAGACA+AGG | 0.611605 | 4.1:+80322804 | None:intergenic |
| TTCAACATGGACACAAACCT+AGG | 0.622509 | 4.1:-80324238 | None:intergenic |
| AGCAAAGAGTTGCTTGAATG+GGG | 0.623231 | 4.1:-80321052 | MS.gene50792:CDS |
| GATGGTTATGCAAGGTCTAG+GGG | 0.628881 | 4.1:-80323935 | MS.gene50792:CDS |
| TCACGGCTGAAAGTAGGGTG+AGG | 0.630951 | 4.1:+80322841 | None:intergenic |
| TGAAATTGCCAAAAGGATGT+GGG | 0.632720 | 4.1:-80322072 | MS.gene50792:intron |
| TTATATGTAGGTGACAGCAC+AGG | 0.638117 | 4.1:-80321524 | MS.gene50792:intron |
| GTGAAACCAGTACTAGTAGC+CGG | 0.648867 | 4.1:-80322637 | MS.gene50792:CDS |
| GTTTCCACAATGCTGAGATG+TGG | 0.650310 | 4.1:-80321499 | MS.gene50792:CDS |
| ACCGGGGACGGTGAAGATGT+CGG | 0.651929 | 4.1:+80324051 | None:intergenic |
| ATGCTGCTGATGGTTATGCA+AGG | 0.654095 | 4.1:-80323943 | MS.gene50792:CDS |
| TGCTAAAGGACTAATTCCTG+AGG | 0.659904 | 4.1:-80322530 | MS.gene50792:CDS |
| AATGCCGGATATGCTGCTGA+TGG | 0.680087 | 4.1:-80323953 | MS.gene50792:CDS |
| ATTGCTCGACCACCTGATCG+CGG | 0.684964 | 4.1:-80324014 | MS.gene50792:CDS |
| GCCCGACGACTAGTGGAAGT+CGG | 0.688394 | 4.1:-80324079 | MS.gene50792:CDS |
| TTGGTTGATGCTATCCACAA+TGG | 0.692862 | 4.1:-80321373 | MS.gene50792:CDS |
| ATTGTGGATAGCATCAACCA+AGG | 0.739038 | 4.1:+80321375 | None:intergenic |
| ATGTCAGGTTGAAGTCACCG+GGG | 0.790969 | 4.1:+80324035 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAATAAAAAT+AGG | + | chr4.1:80321567-80321586 | None:intergenic | 0.0% |
| !!! | ATTTTTATTTTTTTATTTTT+AGG | - | chr4.1:80321567-80321586 | MS.gene50792:intron | 0.0% |
| !! | ATAGTATTATAATATATGAT+TGG | - | chr4.1:80321932-80321951 | MS.gene50792:intron | 10.0% |
| !! | TAATCAAATATACAAATTAA+TGG | + | chr4.1:80324058-80324077 | None:intergenic | 10.0% |
| !! | TATTATTGTAATATTACAAT+TGG | - | chr4.1:80321899-80321918 | MS.gene50792:intron | 10.0% |
| !! | TTATAAAACTATTATTATCA+GGG | + | chr4.1:80321688-80321707 | None:intergenic | 10.0% |
| !! | TTTATAAAACTATTATTATC+AGG | + | chr4.1:80321689-80321708 | None:intergenic | 10.0% |
| !!! | TTAATTTGTATATTTGATTA+TGG | - | chr4.1:80324058-80324077 | MS.gene50792:CDS | 10.0% |
| !! | AAAAATTTACTAGCAAAATT+TGG | + | chr4.1:80323620-80323639 | None:intergenic | 15.0% |
| !! | TTTCAAATCTTATAAGTAAA+AGG | + | chr4.1:80321639-80321658 | None:intergenic | 15.0% |
| !!! | AATATTTTCAAGGTTAATTT+TGG | - | chr4.1:80322043-80322062 | MS.gene50792:intron | 15.0% |
| !!! | AGTAAAAATCAATATTTTCA+AGG | - | chr4.1:80322033-80322052 | MS.gene50792:intron | 15.0% |
| !!! | TATAAAAAGTTTTCAAGTAT+AGG | - | chr4.1:80321820-80321839 | MS.gene50792:intron | 15.0% |
| !! | AATCTGTCAAAAGTTATTAT+TGG | + | chr4.1:80322520-80322539 | None:intergenic | 20.0% |
| !! | ACAAAAACAATAACATAACA+AGG | + | chr4.1:80323380-80323399 | None:intergenic | 20.0% |
| !! | ATAATCTTCTTGATTAACAA+TGG | - | chr4.1:80323772-80323791 | MS.gene50792:CDS | 20.0% |
| !! | ATAATTAAGTAAAAGCTTAG+AGG | + | chr4.1:80323644-80323663 | None:intergenic | 20.0% |
| !! | ATTGTTAATCAAGAAGATTA+TGG | + | chr4.1:80323773-80323792 | None:intergenic | 20.0% |
| !! | TAATGAGTAAAATCTTACTT+TGG | + | chr4.1:80322445-80322464 | None:intergenic | 20.0% |
| !! | TATAATGGTTTATATGTACT+TGG | - | chr4.1:80322249-80322268 | MS.gene50792:CDS | 20.0% |
| !! | TTTGTATATTTGATTATGGT+AGG | - | chr4.1:80324062-80324081 | MS.gene50792:CDS | 20.0% |
| !!! | AAATCAGATTTTGAAAAGAA+AGG | + | chr4.1:80322198-80322217 | None:intergenic | 20.0% |
| !!! | AGCTTATAGAATTTGATTTA+TGG | - | chr4.1:80323197-80323216 | MS.gene50792:intron | 20.0% |
| !!! | ATATGATTGCTTAATTTGAA+TGG | - | chr4.1:80322093-80322112 | MS.gene50792:CDS | 20.0% |
| !!! | ATATGATTTGGTTTACTATT+TGG | - | chr4.1:80322144-80322163 | MS.gene50792:CDS | 20.0% |
| !!! | TAGAATTTGATTTATGGTAT+TGG | - | chr4.1:80323203-80323222 | MS.gene50792:intron | 20.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | - | chr4.1:80321459-80321478 | MS.gene50792:CDS | 25.0% |
| ! | ATGTATTATTGTTGTGTTGT+TGG | - | chr4.1:80321736-80321755 | MS.gene50792:CDS | 25.0% |
| ! | ATTGATTGAGTGTGTTATAA+TGG | - | chr4.1:80322234-80322253 | MS.gene50792:CDS | 25.0% |
| ! | CAAAAGATTAATTACCTTAG+TGG | + | chr4.1:80323908-80323927 | None:intergenic | 25.0% |
| ! | GAACGAAAGAAAAAAAATTG+TGG | + | chr4.1:80323353-80323372 | None:intergenic | 25.0% |
| ! | GAACTGTAATCATTGAAAAT+AGG | + | chr4.1:80322829-80322848 | None:intergenic | 25.0% |
| ! | TATGCTTTCTTGATATGATT+TGG | - | chr4.1:80322132-80322151 | MS.gene50792:CDS | 25.0% |
| ! | TTTCATATTTAACAACAGTG+AGG | + | chr4.1:80323958-80323977 | None:intergenic | 25.0% |
| ! | TTTGAAAAAAATAGTGACAC+TGG | - | chr4.1:80321652-80321671 | MS.gene50792:intron | 25.0% |
| !! | TATGTACTTGGTTTGATTAT+AGG | - | chr4.1:80322261-80322280 | MS.gene50792:CDS | 25.0% |
| !!! | AAAGTTTTCAAGTATAGGTT+CGG | - | chr4.1:80321825-80321844 | MS.gene50792:intron | 25.0% |
| !!! | TTTTAGTTTCATCTTTGACT+TGG | - | chr4.1:80322487-80322506 | MS.gene50792:CDS | 25.0% |
| AAAAGAACATTAACCCTCAA+AGG | + | chr4.1:80323066-80323085 | None:intergenic | 30.0% | |
| AAGCATAAGCAATCTTTCTT+TGG | + | chr4.1:80324135-80324154 | None:intergenic | 30.0% | |
| ATAACAACACCTTCATCAAA+CGG | - | chr4.1:80321060-80321079 | MS.gene50792:CDS | 30.0% | |
| ATCTTCTTGATTAACAATGG+TGG | - | chr4.1:80323775-80323794 | MS.gene50792:CDS | 30.0% | |
| ATTGAAGTTGAAATCCATGA+TGG | - | chr4.1:80323805-80323824 | MS.gene50792:CDS | 30.0% | |
| CAGTTCTTAATCACATTGTA+TGG | + | chr4.1:80323832-80323851 | None:intergenic | 30.0% | |
| CATACAATGTGATTAAGAAC+TGG | - | chr4.1:80323830-80323849 | MS.gene50792:CDS | 30.0% | |
| CTGCTTATGAGAATTATTTC+AGG | - | chr4.1:80322995-80323014 | MS.gene50792:intron | 30.0% | |
| GTCCCAAAATCATTAGAATT+AGG | + | chr4.1:80321435-80321454 | None:intergenic | 30.0% | |
| TATTATTGTTCAGCCTGATA+GGG | - | chr4.1:80322885-80322904 | MS.gene50792:CDS | 30.0% | |
| TTCAATGATTACAGTTCTGT+TGG | - | chr4.1:80322832-80322851 | MS.gene50792:CDS | 30.0% | |
| TTTCATACCTATACTAGCTA+AGG | + | chr4.1:80321593-80321612 | None:intergenic | 30.0% | |
| ! | AAAATCTTACTTTGGAGACA+AGG | + | chr4.1:80322437-80322456 | None:intergenic | 30.0% |
| ! | AACATTTCATTGGAACGTTT+TGG | - | chr4.1:80322737-80322756 | MS.gene50792:intron | 30.0% |
| ! | ACATTTCATTGGAACGTTTT+GGG | - | chr4.1:80322738-80322757 | MS.gene50792:intron | 30.0% |
| ! | ATTTTCATATGATGTGTTGG+TGG | - | chr4.1:80324016-80324035 | MS.gene50792:CDS | 30.0% |
| ! | CACATTTTCATATGATGTGT+TGG | - | chr4.1:80324013-80324032 | MS.gene50792:CDS | 30.0% |
| ! | GGCCTAATTCTAATGATTTT+GGG | - | chr4.1:80321430-80321449 | MS.gene50792:CDS | 30.0% |
| ! | TGTGTTGTTACATTTACTGT+TGG | - | chr4.1:80321336-80321355 | MS.gene50792:intron | 30.0% |
| !! | AGAAAGCATAGCTTTTCAAA+TGG | + | chr4.1:80322122-80322141 | None:intergenic | 30.0% |
| !! | TTACTCACTTCTTTTGAAGA+AGG | - | chr4.1:80322855-80322874 | MS.gene50792:CDS | 30.0% |
| AAAAATAGTGACACTGGCAT+AGG | - | chr4.1:80321658-80321677 | MS.gene50792:intron | 35.0% | |
| AGATTGCTTATGCTTCATTG+AGG | - | chr4.1:80324140-80324159 | MS.gene50792:CDS | 35.0% | |
| ATAGGGTTGTGATTGGAAAT+GGG | - | chr4.1:80322902-80322921 | MS.gene50792:CDS | 35.0% | |
| ATCAAAACACACCCAAATGT+AGG | + | chr4.1:80322928-80322947 | None:intergenic | 35.0% | |
| ATGAAATGTTTGTGATCCTC+AGG | + | chr4.1:80322727-80322746 | None:intergenic | 35.0% | |
| ATTGAGTAATCCAATGGGAT+TGG | - | chr4.1:80322537-80322556 | MS.gene50792:CDS | 35.0% | |
| CAAAAGCTGAAATTGCCAAA+AGG | - | chr4.1:80323159-80323178 | MS.gene50792:intron | 35.0% | |
| CAATTGAACCATATTGCATC+TGG | + | chr4.1:80323444-80323463 | None:intergenic | 35.0% | |
| CAGATGCAATATGGTTCAAT+TGG | - | chr4.1:80323442-80323461 | MS.gene50792:intron | 35.0% | |
| CAGCTTATGCTTATGTAAAC+AGG | + | chr4.1:80322361-80322380 | None:intergenic | 35.0% | |
| CTATTATTGTTCAGCCTGAT+AGG | - | chr4.1:80322884-80322903 | MS.gene50792:CDS | 35.0% | |
| GACAGATTGAGTAATCCAAT+GGG | - | chr4.1:80322532-80322551 | MS.gene50792:CDS | 35.0% | |
| GAGGATCACAAACATTTCAT+TGG | - | chr4.1:80322727-80322746 | MS.gene50792:intron | 35.0% | |
| GTTGTTACATTTACTGTTGG+TGG | - | chr4.1:80321339-80321358 | MS.gene50792:intron | 35.0% | |
| TAGCAAAGAGTTGCTTGAAT+GGG | - | chr4.1:80324185-80324204 | MS.gene50792:CDS | 35.0% | |
| TATGAGTTCCAGATGCAATA+TGG | - | chr4.1:80323433-80323452 | MS.gene50792:intron | 35.0% | |
| TCTCTAGGTTCAGATTTCAT+CGG | + | chr4.1:80323042-80323061 | None:intergenic | 35.0% | |
| TGAAAATAGGTCCAGCAAAT+AGG | + | chr4.1:80322816-80322835 | None:intergenic | 35.0% | |
| TGAAATTGCCAAAAGGATGT+GGG | - | chr4.1:80323166-80323185 | MS.gene50792:intron | 35.0% | |
| TGACAGATTGAGTAATCCAA+TGG | - | chr4.1:80322531-80322550 | MS.gene50792:CDS | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr4.1:80323446-80323465 | MS.gene50792:intron | 35.0% | |
| ! | CAGTGATTTGTATTGTTGGT+GGG | - | chr4.1:80321409-80321428 | MS.gene50792:CDS | 35.0% |
| ! | CATTTCATTGGAACGTTTTG+GGG | - | chr4.1:80322739-80322758 | MS.gene50792:intron | 35.0% |
| ! | CTTTTGGCAATTTCAGCTTT+TGG | + | chr4.1:80323161-80323180 | None:intergenic | 35.0% |
| ! | GGGCCTAATTCTAATGATTT+TGG | - | chr4.1:80321429-80321448 | MS.gene50792:CDS | 35.0% |
| ! | GTTGTTATTATGTCGTTGCA+TGG | + | chr4.1:80321048-80321067 | None:intergenic | 35.0% |
| ! | TACTTTGGAGACAAGGAAAA+TGG | + | chr4.1:80322430-80322449 | None:intergenic | 35.0% |
| ! | TTCAGGATTTTTGTTCCTGA+AGG | - | chr4.1:80323012-80323031 | MS.gene50792:intron | 35.0% |
| ! | TTGCCAGTGATTTGTATTGT+TGG | - | chr4.1:80321405-80321424 | MS.gene50792:CDS | 35.0% |
| ! | TTTTAGGCCTTAGCTAGTAT+AGG | - | chr4.1:80321583-80321602 | MS.gene50792:intron | 35.0% |
| !! | AGAGAGATTGAGTTGAGATT+TGG | + | chr4.1:80321542-80321561 | None:intergenic | 35.0% |
| !!! | ATTTGGGTGTGTTTTGATGA+AGG | - | chr4.1:80322930-80322949 | MS.gene50792:CDS | 35.0% |
| AAGCAGTATTGTTCCTCGTA+AGG | + | chr4.1:80322981-80323000 | None:intergenic | 40.0% | |
| ACAATGGTCAAGGAAATTGC+TGG | - | chr4.1:80323881-80323900 | MS.gene50792:CDS | 40.0% | |
| AGCAAAGAGTTGCTTGAATG+GGG | - | chr4.1:80324186-80324205 | MS.gene50792:CDS | 40.0% | |
| AGCAATTTCCTTGACCATTG+TGG | + | chr4.1:80323882-80323901 | None:intergenic | 40.0% | |
| AGCGTGATTAATGCAATTGC+TGG | - | chr4.1:80321366-80321385 | MS.gene50792:CDS | 40.0% | |
| AGGAAAATGGAACAGGTTCA+CGG | + | chr4.1:80322417-80322436 | None:intergenic | 40.0% | |
| ATAACCATCAGCAGCATATC+CGG | + | chr4.1:80321292-80321311 | None:intergenic | 40.0% | |
| ATGTGACCTCAATGCGTTTA+AGG | + | chr4.1:80323293-80323312 | None:intergenic | 40.0% | |
| ATGTGACCTTAAACGCATTG+AGG | - | chr4.1:80323284-80323303 | MS.gene50792:intron | 40.0% | |
| ATTCAGATGAAGCTAGGGAT+TGG | + | chr4.1:80321119-80321138 | None:intergenic | 40.0% | |
| ATTGGAAATGGGCCTACATT+TGG | - | chr4.1:80322913-80322932 | MS.gene50792:CDS | 40.0% | |
| ATTGTGGATAGCATCAACCA+AGG | + | chr4.1:80323866-80323885 | None:intergenic | 40.0% | |
| CACATCACTTTCACAAACAC+CGG | - | chr4.1:80323978-80323997 | MS.gene50792:CDS | 40.0% | |
| CATTGAGGTGATTGTTCACA+AGG | - | chr4.1:80324155-80324174 | MS.gene50792:CDS | 40.0% | |
| CCACCAACAATACAAATCAC+TGG | + | chr4.1:80321411-80321430 | None:intergenic | 40.0% | |
| CTAAGTTCCTGGCTAAAATC+AGG | + | chr4.1:80321489-80321508 | None:intergenic | 40.0% | |
| CTAGCAAAGAGTTGCTTGAA+TGG | - | chr4.1:80324184-80324203 | MS.gene50792:CDS | 40.0% | |
| CTGAAATTGCCAAAAGGATG+TGG | - | chr4.1:80323165-80323184 | MS.gene50792:intron | 40.0% | |
| GATAGGGTTGTGATTGGAAA+TGG | - | chr4.1:80322901-80322920 | MS.gene50792:CDS | 40.0% | |
| GGAATTAGTCCTTTAGCAGA+TGG | + | chr4.1:80322706-80322725 | None:intergenic | 40.0% | |
| TAAACGCATTGAGGTCACAT+AGG | - | chr4.1:80323293-80323312 | MS.gene50792:intron | 40.0% | |
| TAGTATGTGCAATGCAAACC+TGG | + | chr4.1:80323549-80323568 | None:intergenic | 40.0% | |
| TCACATTGTATGGTCCATCA+TGG | + | chr4.1:80323822-80323841 | None:intergenic | 40.0% | |
| TGATGGTTATGCAAGGTCTA+GGG | - | chr4.1:80321302-80321321 | MS.gene50792:intron | 40.0% | |
| TGCTAAAGGACTAATTCCTG+AGG | - | chr4.1:80322708-80322727 | MS.gene50792:intron | 40.0% | |
| TTATATGTAGGTGACAGCAC+AGG | - | chr4.1:80323714-80323733 | MS.gene50792:intron | 40.0% | |
| TTCAGATGAAGCTAGGGATT+GGG | + | chr4.1:80321118-80321137 | None:intergenic | 40.0% | |
| TTGGAAATGGGCCTACATTT+GGG | - | chr4.1:80322914-80322933 | MS.gene50792:CDS | 40.0% | |
| TTTCCAATCACAACCCTATC+AGG | + | chr4.1:80322901-80322920 | None:intergenic | 40.0% | |
| ! | ACTACTTACCCACATCCTTT+TGG | + | chr4.1:80323177-80323196 | None:intergenic | 40.0% |
| ! | ATGGTAGGTCTTTTGTGAAG+AGG | - | chr4.1:80324077-80324096 | MS.gene50792:CDS | 40.0% |
| ! | ATGGTGATTTGCATGTTTCG+AGG | + | chr4.1:80321029-80321048 | None:intergenic | 40.0% |
| ! | CCAGTGATTTGTATTGTTGG+TGG | - | chr4.1:80321408-80321427 | MS.gene50792:CDS | 40.0% |
| ! | CTTGGTTTGATTATAGGCTG+TGG | - | chr4.1:80322267-80322286 | MS.gene50792:CDS | 40.0% |
| ! | GCTTTCGCTACTCTTAGTTT+TGG | + | chr4.1:80322628-80322647 | None:intergenic | 40.0% |
| ! | GGTTGATTCAGATGAAGCTA+GGG | + | chr4.1:80321124-80321143 | None:intergenic | 40.0% |
| ! | TGCGTTTAAGGTCACATAAG+CGG | + | chr4.1:80323281-80323300 | None:intergenic | 40.0% |
| ! | TGGTGATTTGCATGTTTCGA+GGG | + | chr4.1:80321028-80321047 | None:intergenic | 40.0% |
| ! | TTGGTTGATGCTATCCACAA+TGG | - | chr4.1:80323865-80323884 | MS.gene50792:CDS | 40.0% |
| !! | ATTGAGTTGAGATTTGGACC+TGG | + | chr4.1:80321536-80321555 | None:intergenic | 40.0% |
| !! | CTGATTTTAGCCAGGAACTT+AGG | - | chr4.1:80321487-80321506 | MS.gene50792:CDS | 40.0% |
| !! | TGAAGGGGATTTTTGGATTG+TGG | + | chr4.1:80321094-80321113 | None:intergenic | 40.0% |
| !!! | ATTGGGTTGAAGGGGATTTT+TGG | + | chr4.1:80321101-80321120 | None:intergenic | 40.0% |
| AAACCAAGAGTCTCCTGTCT+CGG | + | chr4.1:80323133-80323152 | None:intergenic | 45.0% | |
| AAATGTGTCAGTGTCGTGTC+CGG | + | chr4.1:80324000-80324019 | None:intergenic | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr4.1:80323511-80323530 | MS.gene50792:intron | 45.0% | |
| AATAGTGACACTGGCATAGG+TGG | - | chr4.1:80321661-80321680 | MS.gene50792:intron | 45.0% | |
| AGGAAATTGCTGGACCACTA+AGG | - | chr4.1:80323891-80323910 | MS.gene50792:CDS | 45.0% | |
| AGTTGCTTGAATGGGGATCA+AGG | - | chr4.1:80324193-80324212 | MS.gene50792:CDS | 45.0% | |
| ATAGGCTGTGGTCAACAACT+TGG | - | chr4.1:80322279-80322298 | MS.gene50792:CDS | 45.0% | |
| ATGCTGCTGATGGTTATGCA+AGG | - | chr4.1:80321295-80321314 | MS.gene50792:intron | 45.0% | |
| CTGATGGTTATGCAAGGTCT+AGG | - | chr4.1:80321301-80321320 | MS.gene50792:intron | 45.0% | |
| GAACCGAAGCTGAAAAACGT+CGG | - | chr4.1:80321246-80321265 | MS.gene50792:intron | 45.0% | |
| GAACTGGAATTACACTGCCT+TGG | - | chr4.1:80323846-80323865 | MS.gene50792:CDS | 45.0% | |
| GAAGCAATTCAGACAGCAAC+AGG | - | chr4.1:80324108-80324127 | MS.gene50792:CDS | 45.0% | |
| GAGTAATCCAATGGGATTGG+AGG | - | chr4.1:80322540-80322559 | MS.gene50792:CDS | 45.0% | |
| GATGCTATCCACAATGGTCA+AGG | - | chr4.1:80323871-80323890 | MS.gene50792:CDS | 45.0% | |
| GATGGTTATGCAAGGTCTAG+GGG | - | chr4.1:80321303-80321322 | MS.gene50792:intron | 45.0% | |
| GATTTCATCGGCAAACCTTC+AGG | + | chr4.1:80323030-80323049 | None:intergenic | 45.0% | |
| GCAGATGGCATGACAGAATA+CGG | + | chr4.1:80322691-80322710 | None:intergenic | 45.0% | |
| GCTGATGCATACCTATTTGC+TGG | - | chr4.1:80322802-80322821 | MS.gene50792:intron | 45.0% | |
| GCTTCATCTGAATCAACCCT+AGG | - | chr4.1:80321126-80321145 | MS.gene50792:CDS | 45.0% | |
| GGAGACAAGGAAAATGGAAC+AGG | + | chr4.1:80322424-80322443 | None:intergenic | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr4.1:80323454-80323473 | MS.gene50792:intron | 45.0% | |
| GTGAAACCAGTACTAGTAGC+CGG | - | chr4.1:80322601-80322620 | MS.gene50792:CDS | 45.0% | |
| GTTGCTTGAATGGGGATCAA+GGG | - | chr4.1:80324194-80324213 | MS.gene50792:CDS | 45.0% | |
| GTTTCCACAATGCTGAGATG+TGG | - | chr4.1:80323739-80323758 | MS.gene50792:CDS | 45.0% | |
| TCTGGAAACACCTAAGTTCC+TGG | + | chr4.1:80321500-80321519 | None:intergenic | 45.0% | |
| TCTGTCATGCCATCTGCTAA+AGG | - | chr4.1:80322694-80322713 | MS.gene50792:CDS | 45.0% | |
| TGAACCTAGAGAGCCTTTGA+GGG | - | chr4.1:80323050-80323069 | MS.gene50792:intron | 45.0% | |
| TGCTGTAACGAACTGAATGC+CGG | - | chr4.1:80321270-80321289 | MS.gene50792:intron | 45.0% | |
| TGGTTATGCTCAAGCTGTTC+CGG | - | chr4.1:80323486-80323505 | MS.gene50792:intron | 45.0% | |
| TTAACCCTCAAAGGCTCTCT+AGG | + | chr4.1:80323057-80323076 | None:intergenic | 45.0% | |
| TTGTGCCGAGATTGTGGAAT+CGG | - | chr4.1:80322780-80322799 | MS.gene50792:intron | 45.0% | |
| ! | ATCAGCCGATTCCACAATCT+CGG | + | chr4.1:80322788-80322807 | None:intergenic | 45.0% |
| ! | GGGTTGATTCAGATGAAGCT+AGG | + | chr4.1:80321125-80321144 | None:intergenic | 45.0% |
| ! | TGCATTTTGTGCCGAGATTG+TGG | - | chr4.1:80322774-80322793 | MS.gene50792:intron | 45.0% |
| !! | AAGCTAGGGATTGGGTTGAA+GGG | + | chr4.1:80321110-80321129 | None:intergenic | 45.0% |
| !! | AATGTCAGGTTGAAGTCACC+GGG | + | chr4.1:80321207-80321226 | None:intergenic | 45.0% |
| !! | CAACCGACGTTTTTCAGCTT+CGG | + | chr4.1:80321252-80321271 | None:intergenic | 45.0% |
| !! | CAATGTCAGGTTGAAGTCAC+CGG | + | chr4.1:80321208-80321227 | None:intergenic | 45.0% |
| !! | GAAACAGTGCCGTTTGATGA+AGG | + | chr4.1:80321072-80321091 | None:intergenic | 45.0% |
| !! | GGCTACTAGTACTGGTTTCA+CGG | + | chr4.1:80322602-80322621 | None:intergenic | 45.0% |
| !! | TGGTTTGCCTGATTTTAGCC+AGG | - | chr4.1:80321479-80321498 | MS.gene50792:CDS | 45.0% |
| !!! | CGCTACTCTTAGTTTTGGAC+CGG | + | chr4.1:80322623-80322642 | None:intergenic | 45.0% |
| !! | AAATTTATCTTATTATAATT+TGG | - | chr4.1:80321989-80322008 | MS.gene50792:intron | 5.0% |
| !! | TATGATATAAAAAATTTAAT+CGG | + | chr4.1:80323684-80323703 | None:intergenic | 5.0% |
| !!! | TATTTTTTAAAATTATATGT+AGG | - | chr4.1:80323702-80323721 | MS.gene50792:intron | 5.0% |
| AATGCCGGATATGCTGCTGA+TGG | - | chr4.1:80321285-80321304 | MS.gene50792:intron | 50.0% | |
| ACAGGTTCACGGCTGAAAGT+AGG | + | chr4.1:80322406-80322425 | None:intergenic | 50.0% | |
| ACTGCTGTTATTGCCGAGAC+AGG | - | chr4.1:80323117-80323136 | MS.gene50792:intron | 50.0% | |
| CAAGCAATCACTCGCTTCTC+CGG | + | chr4.1:80323508-80323527 | None:intergenic | 50.0% | |
| CAGCCTGATAGGGTTGTGAT+TGG | - | chr4.1:80322895-80322914 | MS.gene50792:CDS | 50.0% | |
| CAGGTTCACGGCTGAAAGTA+GGG | + | chr4.1:80322405-80322424 | None:intergenic | 50.0% | |
| CATTGGCGATGGAAGTTTCC+AGG | - | chr4.1:80323528-80323547 | MS.gene50792:intron | 50.0% | |
| CCTGGTAGCAAGTAACAGTC+TGG | + | chr4.1:80321518-80321537 | None:intergenic | 50.0% | |
| CTGAACCTAGAGAGCCTTTG+AGG | - | chr4.1:80323049-80323068 | MS.gene50792:intron | 50.0% | |
| CTGTCCACATCTCAGCATTG+TGG | + | chr4.1:80323746-80323765 | None:intergenic | 50.0% | |
| GCTGAAAGTAGGGTGAGGAA+TGG | + | chr4.1:80322395-80322414 | None:intergenic | 50.0% | |
| TGCATGTTTCGAGGGATCCT+AGG | + | chr4.1:80321020-80321039 | None:intergenic | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+TGG | - | chr4.1:80323466-80323485 | MS.gene50792:intron | 50.0% | |
| TTATGCAAGGTCTAGGGGTG+TGG | - | chr4.1:80321308-80321327 | MS.gene50792:intron | 50.0% | |
| TTTGGACCGGCTACTAGTAC+TGG | + | chr4.1:80322610-80322629 | None:intergenic | 50.0% | |
| ! | CCAGACTGTTACTTGCTACC+AGG | - | chr4.1:80321515-80321534 | MS.gene50792:CDS | 50.0% |
| ! | GTGATTGCTTGCATTGGCGA+TGG | - | chr4.1:80323517-80323536 | MS.gene50792:intron | 50.0% |
| ! | TATGCAAGGTCTAGGGGTGT+GGG | - | chr4.1:80321309-80321328 | MS.gene50792:intron | 50.0% |
| !! | AGCTAGGGATTGGGTTGAAG+GGG | + | chr4.1:80321109-80321128 | None:intergenic | 50.0% |
| !! | ATGTCAGGTTGAAGTCACCG+GGG | + | chr4.1:80321206-80321225 | None:intergenic | 50.0% |
| !! | GAAGCTAGGGATTGGGTTGA+AGG | + | chr4.1:80321111-80321130 | None:intergenic | 50.0% |
| !! | TACCGACTTCCACTAGTCGT+CGG | + | chr4.1:80321164-80321183 | None:intergenic | 50.0% |
| AATGGGATTGGAGGCAGCAG+TGG | - | chr4.1:80322549-80322568 | MS.gene50792:CDS | 55.0% | |
| ACTGCTGCCTCCAATCCCAT+TGG | + | chr4.1:80322550-80322569 | None:intergenic | 55.0% | |
| ATTGCTCGACCACCTGATCG+CGG | - | chr4.1:80321224-80321243 | MS.gene50792:intron | 55.0% | |
| TCACGGCTGAAAGTAGGGTG+AGG | + | chr4.1:80322400-80322419 | None:intergenic | 55.0% | |
| TCAGGTGGTCGAGCAATGTC+AGG | + | chr4.1:80321221-80321240 | None:intergenic | 55.0% | |
| TTGCCGAGACAGGAGACTCT+TGG | - | chr4.1:80323127-80323146 | MS.gene50792:intron | 55.0% | |
| ! | ACCGACTTCCACTAGTCGTC+GGG | + | chr4.1:80321163-80321182 | None:intergenic | 55.0% |
| ACCGACATCTTCACCGTCCC+CGG | - | chr4.1:80321186-80321205 | MS.gene50792:intron | 60.0% | |
| ACCGGGGACGGTGAAGATGT+CGG | + | chr4.1:80321190-80321209 | None:intergenic | 60.0% | |
| CTTCCACTAGTCGTCGGGCT+AGG | + | chr4.1:80321158-80321177 | None:intergenic | 60.0% | |
| GCCCGACGACTAGTGGAAGT+CGG | - | chr4.1:80321159-80321178 | MS.gene50792:intron | 60.0% | |
| TCACCTAGCCCGACGACTAG+TGG | - | chr4.1:80321152-80321171 | MS.gene50792:CDS | 60.0% | |
| TCAGCTTCGGTTCCGCGATC+AGG | + | chr4.1:80321239-80321258 | None:intergenic | 60.0% | |
| ! | CAGGTTGAAGTCACCGGGGA+CGG | + | chr4.1:80321202-80321221 | None:intergenic | 60.0% |
| ! | CGCTTGCAAAGCGCCTTACG+AGG | - | chr4.1:80322965-80322984 | MS.gene50792:intron | 60.0% |
| ! | TCGGGCTAGGTGACTGCCTA+GGG | + | chr4.1:80321145-80321164 | None:intergenic | 60.0% |
| GCTTCGGTTCCGCGATCAGG+TGG | + | chr4.1:80321236-80321255 | None:intergenic | 65.0% | |
| GGCAGCAGTGGAAGCAGCTG+CGG | - | chr4.1:80322561-80322580 | MS.gene50792:CDS | 65.0% | |
| ! | GTCGGGCTAGGTGACTGCCT+AGG | + | chr4.1:80321146-80321165 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 80321006 | 80324254 | 80321006 | ID=MS.gene50792 |
| chr4.1 | mRNA | 80321006 | 80324254 | 80321006 | ID=MS.gene50792.t1;Parent=MS.gene50792 |
| chr4.1 | exon | 80323724 | 80324254 | 80323724 | ID=MS.gene50792.t1.exon1;Parent=MS.gene50792.t1 |
| chr4.1 | CDS | 80323724 | 80324254 | 80323724 | ID=cds.MS.gene50792.t1;Parent=MS.gene50792.t1 |
| chr4.1 | exon | 80322814 | 80322977 | 80322814 | ID=MS.gene50792.t1.exon2;Parent=MS.gene50792.t1 |
| chr4.1 | CDS | 80322814 | 80322977 | 80322814 | ID=cds.MS.gene50792.t1;Parent=MS.gene50792.t1 |
| chr4.1 | exon | 80322073 | 80322723 | 80322073 | ID=MS.gene50792.t1.exon3;Parent=MS.gene50792.t1 |
| chr4.1 | CDS | 80322073 | 80322723 | 80322073 | ID=cds.MS.gene50792.t1;Parent=MS.gene50792.t1 |
| chr4.1 | exon | 80321711 | 80321828 | 80321711 | ID=MS.gene50792.t1.exon4;Parent=MS.gene50792.t1 |
| chr4.1 | CDS | 80321711 | 80321828 | 80321711 | ID=cds.MS.gene50792.t1;Parent=MS.gene50792.t1 |
| chr4.1 | exon | 80321348 | 80321536 | 80321348 | ID=MS.gene50792.t1.exon5;Parent=MS.gene50792.t1 |
| chr4.1 | CDS | 80321348 | 80321536 | 80321348 | ID=cds.MS.gene50792.t1;Parent=MS.gene50792.t1 |
| chr4.1 | exon | 80321006 | 80321176 | 80321006 | ID=MS.gene50792.t1.exon6;Parent=MS.gene50792.t1 |
| chr4.1 | CDS | 80321006 | 80321176 | 80321006 | ID=cds.MS.gene50792.t1;Parent=MS.gene50792.t1 |
| Gene Sequence |
| Protein sequence |
