Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51539.t1 | XP_024631051.1 | 92.9 | 462 | 33 | 0 | 1 | 462 | 33 | 494 | 8.90E-242 | 845.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51539.t1 | Q9LEV7 | 62.2 | 437 | 165 | 0 | 1 | 437 | 48 | 484 | 2.6e-165 | 583.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51539.t1 | A0A2Z6M6X2 | 84.9 | 463 | 69 | 1 | 1 | 462 | 34 | 496 | 3.0e-231 | 810.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene51539 | 0.801343 | 9.41E-49 | -1.69E-46 |
| MS.gene051959 | MS.gene51539 | 0.809107 | 2.23E-50 | -1.69E-46 |
| MS.gene051960 | MS.gene51539 | 0.814392 | 1.58E-51 | -1.69E-46 |
| MS.gene052053 | MS.gene51539 | 0.849039 | 4.18E-60 | -1.69E-46 |
| MS.gene055549 | MS.gene51539 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene055550 | MS.gene51539 | 0.810976 | 8.82E-51 | -1.69E-46 |
| MS.gene056530 | MS.gene51539 | 0.870419 | 1.48E-66 | -1.69E-46 |
| MS.gene057001 | MS.gene51539 | 0.804245 | 2.37E-49 | -1.69E-46 |
| MS.gene058628 | MS.gene51539 | 0.82378 | 1.15E-53 | -1.69E-46 |
| MS.gene058629 | MS.gene51539 | 0.803904 | 2.79E-49 | -1.69E-46 |
| MS.gene058630 | MS.gene51539 | 0.814087 | 1.84E-51 | -1.69E-46 |
| MS.gene05884 | MS.gene51539 | 0.845061 | 5.14E-59 | -1.69E-46 |
| MS.gene059436 | MS.gene51539 | 0.831394 | 1.71E-55 | -1.69E-46 |
| MS.gene059514 | MS.gene51539 | 0.819478 | 1.14E-52 | -1.69E-46 |
| MS.gene06012 | MS.gene51539 | 0.824069 | 9.85E-54 | -1.69E-46 |
| MS.gene060237 | MS.gene51539 | 0.803342 | 3.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51539.t1 | MTR_1g014220 | 88.312 | 462 | 13 | 1 | 1 | 462 | 33 | 453 | 0.0 | 813 |
| MS.gene51539.t1 | MTR_1g014250 | 49.348 | 460 | 226 | 3 | 1 | 456 | 41 | 497 | 5.45e-153 | 444 |
| MS.gene51539.t1 | MTR_1g014250 | 48.276 | 377 | 188 | 3 | 84 | 456 | 1 | 374 | 1.17e-123 | 365 |
| MS.gene51539.t1 | MTR_3g051190 | 25.971 | 489 | 291 | 10 | 3 | 425 | 5 | 488 | 6.60e-42 | 155 |
| MS.gene51539.t1 | MTR_1g103530 | 27.463 | 335 | 229 | 7 | 5 | 333 | 108 | 434 | 3.73e-34 | 135 |
| MS.gene51539.t1 | MTR_5g007060 | 46.364 | 110 | 44 | 1 | 266 | 375 | 167 | 261 | 4.79e-25 | 104 |
| MS.gene51539.t1 | MTR_3g008470 | 26.108 | 406 | 277 | 10 | 31 | 424 | 120 | 514 | 9.56e-24 | 104 |
| MS.gene51539.t1 | MTR_1g103530 | 26.199 | 271 | 189 | 4 | 69 | 333 | 4 | 269 | 1.28e-23 | 103 |
| MS.gene51539.t1 | MTR_2g031810 | 24.000 | 300 | 209 | 4 | 120 | 409 | 43 | 333 | 5.23e-17 | 82.8 |
| MS.gene51539.t1 | MTR_2g031790 | 24.597 | 248 | 171 | 4 | 166 | 409 | 75 | 310 | 4.85e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51539.t1 | AT5G10820 | 60.746 | 456 | 179 | 0 | 1 | 456 | 48 | 503 | 0.0 | 570 |
| MS.gene51539.t1 | AT1G79710 | 48.465 | 456 | 232 | 1 | 1 | 456 | 40 | 492 | 3.39e-161 | 465 |
| MS.gene51539.t1 | AT1G79710 | 48.465 | 456 | 232 | 1 | 1 | 456 | 40 | 492 | 3.39e-161 | 465 |
| MS.gene51539.t1 | AT5G25050 | 46.739 | 460 | 238 | 2 | 1 | 456 | 36 | 492 | 1.65e-149 | 435 |
| MS.gene51539.t1 | AT5G25040 | 45.435 | 460 | 237 | 4 | 1 | 456 | 36 | 485 | 1.90e-134 | 397 |
| MS.gene51539.t1 | AT5G25040 | 43.093 | 485 | 237 | 5 | 1 | 456 | 36 | 510 | 4.83e-129 | 384 |
| MS.gene51539.t1 | AT1G79710 | 48.066 | 362 | 185 | 1 | 1 | 362 | 40 | 398 | 5.38e-124 | 367 |
| MS.gene51539.t1 | AT5G25040 | 46.000 | 400 | 206 | 3 | 1 | 399 | 36 | 426 | 1.93e-118 | 354 |
| MS.gene51539.t1 | AT5G25040 | 46.512 | 344 | 171 | 3 | 116 | 456 | 5 | 338 | 2.36e-102 | 309 |
| MS.gene51539.t1 | AT5G25040 | 44.699 | 349 | 186 | 2 | 1 | 348 | 36 | 378 | 4.37e-99 | 302 |
| MS.gene51539.t1 | AT2G32040 | 29.798 | 396 | 262 | 7 | 22 | 408 | 6 | 394 | 6.04e-50 | 176 |
| MS.gene51539.t1 | AT2G32040 | 29.540 | 413 | 273 | 9 | 5 | 408 | 122 | 525 | 2.00e-49 | 177 |
| MS.gene51539.t1 | AT5G54860 | 24.946 | 461 | 285 | 8 | 22 | 425 | 27 | 483 | 2.61e-42 | 157 |
| MS.gene51539.t1 | AT2G33280 | 25.183 | 409 | 285 | 9 | 31 | 428 | 103 | 501 | 9.95e-23 | 101 |
| MS.gene51539.t1 | AT1G04570 | 26.744 | 430 | 292 | 13 | 13 | 431 | 86 | 503 | 1.16e-22 | 101 |
| MS.gene51539.t1 | AT2G33280 | 25.628 | 398 | 275 | 9 | 42 | 428 | 6 | 393 | 1.58e-22 | 100 |
| MS.gene51539.t1 | AT1G04570 | 26.087 | 230 | 161 | 4 | 205 | 431 | 132 | 355 | 1.22e-17 | 85.1 |
| MS.gene51539.t1 | AT1G64890 | 22.193 | 383 | 287 | 6 | 22 | 400 | 30 | 405 | 9.04e-15 | 76.6 |
| MS.gene51539.t1 | AT2G33280 | 25.962 | 208 | 145 | 4 | 224 | 428 | 118 | 319 | 3.79e-14 | 73.9 |
Find 106 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGCATTGACAATTGTTC+TGG | 0.171571 | 1.4:+7924359 | MS.gene51539:CDS |
| CTACGTTGGAATTTGAAAAT+TGG | 0.214262 | 1.4:+7925799 | MS.gene51539:CDS |
| CATGGATTCTTAAACCTATC+TGG | 0.221992 | 1.4:+7923351 | MS.gene51539:CDS |
| TCTGGTTCTGGTGCTCTTCT+TGG | 0.244927 | 1.4:+7923632 | MS.gene51539:CDS |
| TTAGGGGTCGCTTGGTCTTA+TGG | 0.248348 | 1.4:+7924329 | MS.gene51539:intron |
| GGTGCAGTGGCTTCAATAAT+AGG | 0.259173 | 1.4:+7925670 | MS.gene51539:CDS |
| TAGATTTGTTACACTTGTTT+TGG | 0.260439 | 1.4:+7926083 | MS.gene51539:CDS |
| GGTTTCTTTGTTCATCATCT+TGG | 0.287418 | 1.4:+7923668 | MS.gene51539:CDS |
| AACTAGTCACTGATTACTAT+TGG | 0.295416 | 1.4:+7923267 | MS.gene51539:CDS |
| ACTCCAGCAACGACAAAATA+AGG | 0.315707 | 1.4:-7923419 | None:intergenic |
| ATTTCTCTAAACTTCAGTTT+TGG | 0.318615 | 1.4:-7926220 | None:intergenic |
| TTGGTGGCCTTATATCAAAA+TGG | 0.333437 | 1.4:+7925974 | MS.gene51539:CDS |
| GTGCAGTGGCTTCAATAATA+GGG | 0.341061 | 1.4:+7925671 | MS.gene51539:CDS |
| CCTGCATTGACAATTGTTCT+GGG | 0.345500 | 1.4:+7924360 | MS.gene51539:CDS |
| CTGCTATGAATGTTGGGTTT+AGG | 0.346268 | 1.4:-7923193 | None:intergenic |
| TAAGAATCACAGGTAAAATA+AGG | 0.349153 | 1.4:+7925863 | MS.gene51539:CDS |
| ATATGCAATATCAGGTCTAT+TGG | 0.355056 | 1.4:+7925762 | MS.gene51539:CDS |
| CCACACAAACTCTGCAAATC+AGG | 0.355919 | 1.4:-7923602 | None:intergenic |
| GCAGGAATATTCCTAGTATA+TGG | 0.356591 | 1.4:+7923212 | MS.gene51539:CDS |
| TGTTCATCATCTTGGTCCTC+AGG | 0.362448 | 1.4:+7923676 | MS.gene51539:CDS |
| CAACTCCTATATGCAATATC+AGG | 0.388681 | 1.4:+7925754 | MS.gene51539:CDS |
| TTTGTCGTTGCTGGAGTTGT+TGG | 0.390199 | 1.4:+7923425 | MS.gene51539:CDS |
| AATGTTCCTTCAACTCCTAA+TGG | 0.397101 | 1.4:-7925922 | None:intergenic |
| TGGTGGCCTTATATCAAAAT+GGG | 0.409984 | 1.4:+7925975 | MS.gene51539:CDS |
| AGGAATAGTATTGAGGTTCC+AGG | 0.421524 | 1.4:+7923572 | MS.gene51539:CDS |
| ATATTCCTGCTATGAATGTT+GGG | 0.421667 | 1.4:-7923199 | None:intergenic |
| AATATTCCTGCTATGAATGT+TGG | 0.422576 | 1.4:-7923200 | None:intergenic |
| ACGTAGAGTTGAACTGTTGA+AGG | 0.432809 | 1.4:-7923311 | None:intergenic |
| TCCTAATGTTGGGCCTTATG+AGG | 0.433740 | 1.4:+7926116 | MS.gene51539:CDS |
| CTCCGACGATATCCCATTAC+CGG | 0.438695 | 1.4:-7923395 | None:intergenic |
| TCCTCATAAGGCCCAACATT+AGG | 0.441850 | 1.4:-7926117 | None:intergenic |
| CTATGTCCATTAGGAGTTGA+AGG | 0.446903 | 1.4:+7925916 | MS.gene51539:CDS |
| TTGAATATGCAGGAGTTTGT+TGG | 0.457566 | 1.4:+7925631 | MS.gene51539:intron |
| TTTGTGCTTAGTACCATCAT+AGG | 0.457654 | 1.4:-7925892 | None:intergenic |
| CTTGGCCTATACCATATACT+AGG | 0.458394 | 1.4:-7923223 | None:intergenic |
| ATGGATTCTTAAACCTATCT+GGG | 0.464122 | 1.4:+7923352 | MS.gene51539:CDS |
| GTTGGTATAATCTATGCAAT+TGG | 0.464940 | 1.4:+7925649 | MS.gene51539:CDS |
| GCTACGATTGTTGCGGTTGG+AGG | 0.467301 | 1.4:+7923458 | MS.gene51539:CDS |
| AGCACAAAACTATGTCCATT+AGG | 0.470560 | 1.4:+7925907 | MS.gene51539:CDS |
| ATATTCCTAGTATATGGTAT+AGG | 0.475760 | 1.4:+7923218 | MS.gene51539:CDS |
| GAAGGAATCAACTCCTCATA+AGG | 0.481908 | 1.4:-7926129 | None:intergenic |
| TTGTCGTTGCTGGAGTTGTT+GGG | 0.482406 | 1.4:+7923426 | MS.gene51539:CDS |
| CTTCTTGGTTATCTTGCTAG+TGG | 0.487565 | 1.4:+7923647 | MS.gene51539:CDS |
| CCTGATTTGCAGAGTTTGTG+TGG | 0.489748 | 1.4:+7923602 | MS.gene51539:CDS |
| TGAGGAGTTGATTCCTTCTG+AGG | 0.491264 | 1.4:+7926134 | MS.gene51539:CDS |
| CTGATTTGCAGAGTTTGTGT+GGG | 0.494014 | 1.4:+7923603 | MS.gene51539:CDS |
| ATCTATGAAAAGAGAACCAT+TGG | 0.500353 | 1.4:+7924390 | MS.gene51539:CDS |
| GGTATAGGCCAAGGCTTCAC+AGG | 0.501541 | 1.4:+7923233 | MS.gene51539:CDS |
| AGTCGGCCCTGCATTCTCTC+AGG | 0.502838 | 1.4:+7924749 | MS.gene51539:CDS |
| AATCAGTTCTAGTAACATGA+AGG | 0.503411 | 1.4:-7926020 | None:intergenic |
| CCCAGAACAATTGTCAATGC+AGG | 0.503491 | 1.4:-7924360 | None:intergenic |
| CTTGCATAATGAAAAGAAGC+AGG | 0.511118 | 1.4:+7924413 | MS.gene51539:CDS |
| CTATTGATGCTTGTATTGCA+AGG | 0.511611 | 1.4:+7923552 | MS.gene51539:CDS |
| CTTATATCAAAATGGGGTGG+AGG | 0.513361 | 1.4:+7925982 | MS.gene51539:CDS |
| TCTGCTACGATTGTTGCGGT+TGG | 0.514030 | 1.4:+7923455 | MS.gene51539:CDS |
| CTCATTTCACAAACCTCAGA+AGG | 0.515142 | 1.4:-7926147 | None:intergenic |
| TATTGCAAGGAATAGTATTG+AGG | 0.520684 | 1.4:+7923565 | MS.gene51539:CDS |
| ATAGACCTGATATTGCATAT+AGG | 0.528384 | 1.4:-7925759 | None:intergenic |
| AATAAGGTGGATGCCTATGA+TGG | 0.535562 | 1.4:+7925879 | MS.gene51539:CDS |
| CTATGAATGTTGGGTTTAGG+TGG | 0.536773 | 1.4:-7923190 | None:intergenic |
| AGAGTTGAACTGTTGAAGGT+TGG | 0.538340 | 1.4:-7923307 | None:intergenic |
| CAGATAGGTTTAAGAATCCA+TGG | 0.538409 | 1.4:-7923350 | None:intergenic |
| CTAGTATATGGTATAGGCCA+AGG | 0.539645 | 1.4:+7923224 | MS.gene51539:CDS |
| AGAGTGAGCCTGTGAAGCCT+TGG | 0.539998 | 1.4:-7923241 | None:intergenic |
| TGCAAATCAGGAGCCAACCC+TGG | 0.542040 | 1.4:-7923590 | None:intergenic |
| TCGGTTAGAATGCCCCAGAT+AGG | 0.542383 | 1.4:-7923365 | None:intergenic |
| ATGTGTATTGATAGCATTGG+TGG | 0.544527 | 1.4:+7925958 | MS.gene51539:CDS |
| AATGTAGGAACGACAATTCG+AGG | 0.547125 | 1.4:+7924609 | MS.gene51539:CDS |
| ACTTAATCTTCATTCTACGT+TGG | 0.547948 | 1.4:+7925785 | MS.gene51539:CDS |
| AGGTGAGGTGAGTGTGGTTG+CGG | 0.548820 | 1.4:+7923478 | MS.gene51539:CDS |
| GATGCTGCTATAAGAATCAC+AGG | 0.550403 | 1.4:+7925853 | MS.gene51539:CDS |
| AGAGGTACCTGAGAGAATGC+AGG | 0.554272 | 1.4:-7924756 | None:intergenic |
| CTTAATGTAACCACTCATGA+AGG | 0.563754 | 1.4:+7924699 | MS.gene51539:CDS |
| TTAAAAGAACAGCCAACCAT+AGG | 0.564884 | 1.4:-7926050 | None:intergenic |
| GAAAGGAACATGTAAAGAGA+TGG | 0.565527 | 1.4:-7924669 | None:intergenic |
| TAGTATTGAGGTTCCAGGGT+TGG | 0.566971 | 1.4:+7923577 | MS.gene51539:CDS |
| CGTTGCTGGAGTTGTTGGGA+CGG | 0.568419 | 1.4:+7923430 | MS.gene51539:CDS |
| TCCCATTACCGGAAAAGCGT+CGG | 0.572083 | 1.4:-7923384 | None:intergenic |
| GAGTGGTTACATTAAGAGCA+AGG | 0.572992 | 1.4:-7924692 | None:intergenic |
| TGGTATACTGATTCAAAAGT+CGG | 0.575373 | 1.4:+7924732 | MS.gene51539:CDS |
| AGAGATGGCTTCCATGCTTG+AGG | 0.576390 | 1.4:-7924654 | None:intergenic |
| CAATAAAGTATCCTCAAGCA+TGG | 0.577374 | 1.4:+7924643 | MS.gene51539:CDS |
| TTATATCAAAATGGGGTGGA+GGG | 0.579386 | 1.4:+7925983 | MS.gene51539:CDS |
| ATCAGTTCTAGTAACATGAA+GGG | 0.581853 | 1.4:-7926019 | None:intergenic |
| TGATATTGATGAAGAGACCT+TGG | 0.583427 | 1.4:+7926179 | MS.gene51539:CDS |
| TGCAGTGGCTTCAATAATAG+GGG | 0.585973 | 1.4:+7925672 | MS.gene51539:CDS |
| AATCTATGCAATTGGTGCAG+TGG | 0.592181 | 1.4:+7925657 | MS.gene51539:CDS |
| CTAAACCCAACATTCATAGC+AGG | 0.594016 | 1.4:+7923194 | MS.gene51539:CDS |
| TTAATGTGTATTGATAGCAT+TGG | 0.600486 | 1.4:+7925955 | MS.gene51539:CDS |
| GGTTGGAGGTGAGGTGAGTG+TGG | 0.600541 | 1.4:+7923472 | MS.gene51539:CDS |
| TTACATTAAGAGCAAGGGAA+AGG | 0.602871 | 1.4:-7924686 | None:intergenic |
| GGAATAGTATTGAGGTTCCA+GGG | 0.603259 | 1.4:+7923573 | MS.gene51539:CDS |
| TTCCGGTAATGGGATATCGT+CGG | 0.604421 | 1.4:+7923393 | MS.gene51539:CDS |
| GAATCACAGGTAAAATAAGG+TGG | 0.606638 | 1.4:+7925866 | MS.gene51539:CDS |
| AGTGGTTACATTAAGAGCAA+GGG | 0.607736 | 1.4:-7924691 | None:intergenic |
| GATTGTTGCGGTTGGAGGTG+AGG | 0.608467 | 1.4:+7923463 | MS.gene51539:CDS |
| TAGGAATATACTTCATACCA+TGG | 0.624013 | 1.4:+7923333 | MS.gene51539:CDS |
| ATTTAAAGGAACAAGCTCCA+AGG | 0.627727 | 1.4:-7926196 | None:intergenic |
| GAGGTACCTGAGAGAATGCA+GGG | 0.635587 | 1.4:-7924755 | None:intergenic |
| GGCCTTATATCAAAATGGGG+TGG | 0.639767 | 1.4:+7925979 | MS.gene51539:CDS |
| GGGGTCGCTTGGTCTTATGG+CGG | 0.651608 | 1.4:+7924332 | MS.gene51539:intron |
| CGGTAATGGGATATCGTCGG+AGG | 0.661735 | 1.4:+7923396 | MS.gene51539:CDS |
| TCAACAGTTCAACTCTACGT+AGG | 0.687400 | 1.4:+7923314 | MS.gene51539:CDS |
| GGTGGCCTTATATCAAAATG+GGG | 0.688936 | 1.4:+7925976 | MS.gene51539:CDS |
| TGGATTCTTAAACCTATCTG+GGG | 0.710158 | 1.4:+7923353 | MS.gene51539:CDS |
| GGTGTCTGCTACGATTGTTG+CGG | 0.735711 | 1.4:+7923451 | MS.gene51539:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGATAAATAAAATGTTT+AGG | + | chr1.4:7923783-7923802 | MS.gene51539:intron | 10.0% |
| !!! | TGATTAAATACATTTTTTTA+GGG | + | chr1.4:7924576-7924595 | MS.gene51539:intron | 10.0% |
| !! | AATTCTATAAGAAAAAGAAA+TGG | - | chr1.4:7925598-7925617 | None:intergenic | 15.0% |
| !! | TCTATAACAAAAGATAAATA+AGG | + | chr1.4:7925047-7925066 | MS.gene51539:intron | 15.0% |
| !!! | ATTAAATACATTTTTTTAGG+GGG | + | chr1.4:7924578-7924597 | MS.gene51539:intron | 15.0% |
| !!! | ATTTAGTTGATAAAATCTTA+AGG | - | chr1.4:7924150-7924169 | None:intergenic | 15.0% |
| !!! | CTGATTAAATACATTTTTTT+AGG | + | chr1.4:7924575-7924594 | MS.gene51539:intron | 15.0% |
| !!! | GATTAAATACATTTTTTTAG+GGG | + | chr1.4:7924577-7924596 | MS.gene51539:intron | 15.0% |
| !!! | TATCATGTTAATCATTTTTT+AGG | + | chr1.4:7924011-7924030 | MS.gene51539:intron | 15.0% |
| !! | AATAAGGTGAAAACAAATTA+TGG | + | chr1.4:7925131-7925150 | MS.gene51539:intron | 20.0% |
| !! | AATCATCTGAAAACAAAATA+TGG | - | chr1.4:7925327-7925346 | None:intergenic | 20.0% |
| !! | AGAGTTAAACATACAAAATA+GGG | - | chr1.4:7923720-7923739 | None:intergenic | 20.0% |
| !! | ATCATCTGAAAACAAAATAT+GGG | - | chr1.4:7925326-7925345 | None:intergenic | 20.0% |
| !! | TAACAAAAGATAAATAAGGT+CGG | + | chr1.4:7925051-7925070 | MS.gene51539:intron | 20.0% |
| !! | TAGAGTTAAACATACAAAAT+AGG | - | chr1.4:7923721-7923740 | None:intergenic | 20.0% |
| !! | TTGAATACAAATTGTAAGTT+CGG | - | chr1.4:7924873-7924892 | None:intergenic | 20.0% |
| !! | TTTAGGAAATAGATTCTTTA+CGG | + | chr1.4:7924784-7924803 | MS.gene51539:intron | 20.0% |
| !!! | ATTTTGTTTTCAGATGATTA+AGG | + | chr1.4:7925328-7925347 | MS.gene51539:intron | 20.0% |
| !!! | CTTTTAACATATAAGTACTT+AGG | - | chr1.4:7925518-7925537 | None:intergenic | 20.0% |
| ! | AAAATAGAAAAACAAACCTG+AGG | - | chr1.4:7923695-7923714 | None:intergenic | 25.0% |
| ! | AATCAGTATACCAGTAAAAA+TGG | - | chr1.4:7924725-7924744 | None:intergenic | 25.0% |
| ! | AGTAACTGCAATTAAGATAT+CGG | + | chr1.4:7925191-7925210 | MS.gene51539:intron | 25.0% |
| ! | ATATTCCTAGTATATGGTAT+AGG | + | chr1.4:7923218-7923237 | MS.gene51539:CDS | 25.0% |
| ! | ATTCATCTGCAAACAAAATA+CGG | - | chr1.4:7924955-7924974 | None:intergenic | 25.0% |
| ! | CTTGAGAACTTATAGAAATA+AGG | + | chr1.4:7925115-7925134 | MS.gene51539:intron | 25.0% |
| ! | GCTATCAATAATTTGAATCA+TGG | + | chr1.4:7923908-7923927 | MS.gene51539:intron | 25.0% |
| ! | TAAGAATCACAGGTAAAATA+AGG | + | chr1.4:7925863-7925882 | MS.gene51539:CDS | 25.0% |
| ! | TCTATTTCCTAAAATATGAG+AGG | - | chr1.4:7924777-7924796 | None:intergenic | 25.0% |
| ! | TTGTATTCAATTGCTTAGAT+TGG | + | chr1.4:7924883-7924902 | MS.gene51539:intron | 25.0% |
| !! | ATTGAACGTTTTCAATTTCA+TGG | + | chr1.4:7924075-7924094 | MS.gene51539:intron | 25.0% |
| !! | TTAATGTGTATTGATAGCAT+TGG | + | chr1.4:7925955-7925974 | MS.gene51539:CDS | 25.0% |
| !! | TTTTCACTGAAAACATCTTA+TGG | - | chr1.4:7925453-7925472 | None:intergenic | 25.0% |
| !! | TTTTTCTTGTTCCTAATGTT+GGG | + | chr1.4:7926106-7926125 | MS.gene51539:CDS | 25.0% |
| !!! | AATGCTTCTGTTGTTATTTT+AGG | + | chr1.4:7924311-7924330 | MS.gene51539:intron | 25.0% |
| !!! | ATGCTTCTGTTGTTATTTTA+GGG | + | chr1.4:7924312-7924331 | MS.gene51539:intron | 25.0% |
| !!! | ATGGTTTTAGTTTTTAGGAT+TGG | + | chr1.4:7923927-7923946 | MS.gene51539:intron | 25.0% |
| !!! | GAATCATGGTTTTAGTTTTT+AGG | + | chr1.4:7923922-7923941 | MS.gene51539:intron | 25.0% |
| !!! | TAGATTTGTTACACTTGTTT+TGG | + | chr1.4:7926083-7926102 | MS.gene51539:CDS | 25.0% |
| !!! | TGTAGTTTTTTAGATACTTG+TGG | - | chr1.4:7925708-7925727 | None:intergenic | 25.0% |
| AATATTCCTGCTATGAATGT+TGG | - | chr1.4:7923203-7923222 | None:intergenic | 30.0% | |
| ACTTAATCTTCATTCTACGT+TGG | + | chr1.4:7925785-7925804 | MS.gene51539:CDS | 30.0% | |
| ATAGACCTGATATTGCATAT+AGG | - | chr1.4:7925762-7925781 | None:intergenic | 30.0% | |
| ATATGCAATATCAGGTCTAT+TGG | + | chr1.4:7925762-7925781 | MS.gene51539:CDS | 30.0% | |
| ATATTCCTGCTATGAATGTT+GGG | - | chr1.4:7923202-7923221 | None:intergenic | 30.0% | |
| ATCTATGAAAAGAGAACCAT+TGG | + | chr1.4:7924390-7924409 | MS.gene51539:CDS | 30.0% | |
| ATGACAACAAAAAAGTAGTC+TGG | - | chr1.4:7925829-7925848 | None:intergenic | 30.0% | |
| ATGGATTCTTAAACCTATCT+GGG | + | chr1.4:7923352-7923371 | MS.gene51539:CDS | 30.0% | |
| CTACGTTGGAATTTGAAAAT+TGG | + | chr1.4:7925799-7925818 | MS.gene51539:CDS | 30.0% | |
| GTTGGTATAATCTATGCAAT+TGG | + | chr1.4:7925649-7925668 | MS.gene51539:CDS | 30.0% | |
| TAGGAATATACTTCATACCA+TGG | + | chr1.4:7923333-7923352 | MS.gene51539:CDS | 30.0% | |
| TATCCAAACAGAGACTAAAA+AGG | + | chr1.4:7925555-7925574 | MS.gene51539:intron | 30.0% | |
| TATTGCAAGGAATAGTATTG+AGG | + | chr1.4:7923565-7923584 | MS.gene51539:CDS | 30.0% | |
| TGATTTCACTTTGTGCAAAT+AGG | - | chr1.4:7924475-7924494 | None:intergenic | 30.0% | |
| ! | AACTAGTCACTGATTACTAT+TGG | + | chr1.4:7923267-7923286 | MS.gene51539:CDS | 30.0% |
| ! | AATCAGTTCTAGTAACATGA+AGG | - | chr1.4:7926023-7926042 | None:intergenic | 30.0% |
| ! | ATCAGTTCTAGTAACATGAA+GGG | - | chr1.4:7926022-7926041 | None:intergenic | 30.0% |
| ! | ATTGAGGTGTTTATCTAAAC+AGG | - | chr1.4:7924983-7925002 | None:intergenic | 30.0% |
| ! | GTTTTTCTTGTTCCTAATGT+TGG | + | chr1.4:7926105-7926124 | MS.gene51539:CDS | 30.0% |
| ! | TCTTTTGACATAAACACTTG+TGG | + | chr1.4:7925387-7925406 | MS.gene51539:intron | 30.0% |
| ! | TGATTTTACTAACCTATGGT+TGG | + | chr1.4:7926038-7926057 | MS.gene51539:CDS | 30.0% |
| ! | TTAGTTAGTTAGTGCTGAAT+TGG | + | chr1.4:7924552-7924571 | MS.gene51539:intron | 30.0% |
| !! | ACTTCAGTTTTGGCATTTAA+AGG | - | chr1.4:7926213-7926232 | None:intergenic | 30.0% |
| !! | AGTTCTGAGATTGTATAGAA+TGG | + | chr1.4:7924045-7924064 | MS.gene51539:intron | 30.0% |
| !! | GAACTGATTTTACTAACCTA+TGG | + | chr1.4:7926034-7926053 | MS.gene51539:CDS | 30.0% |
| !! | TGGTATACTGATTCAAAAGT+CGG | + | chr1.4:7924732-7924751 | MS.gene51539:CDS | 30.0% |
| !!! | TACATTTTTTTAGGGGGTAT+TGG | + | chr1.4:7924584-7924603 | MS.gene51539:intron | 30.0% |
| !!! | TGCTTCTGTTGTTATTTTAG+GGG | + | chr1.4:7924313-7924332 | MS.gene51539:intron | 30.0% |
| AACACTTGTGGAAACTGTTT+AGG | + | chr1.4:7925399-7925418 | MS.gene51539:intron | 35.0% | |
| AAGTGCTTAGAGCTTAATTG+AGG | - | chr1.4:7924999-7925018 | None:intergenic | 35.0% | |
| AATGTTCCTTCAACTCCTAA+TGG | - | chr1.4:7925925-7925944 | None:intergenic | 35.0% | |
| AATTACTTATAAGCGCTCTC+TGG | - | chr1.4:7923849-7923868 | None:intergenic | 35.0% | |
| ACAAACTCCTGCATATTCAA+AGG | - | chr1.4:7925631-7925650 | None:intergenic | 35.0% | |
| ACACTTGTGGAAACTGTTTA+GGG | + | chr1.4:7925400-7925419 | MS.gene51539:intron | 35.0% | |
| AGCACAAAACTATGTCCATT+AGG | + | chr1.4:7925907-7925926 | MS.gene51539:CDS | 35.0% | |
| AGTGGTTACATTAAGAGCAA+GGG | - | chr1.4:7924694-7924713 | None:intergenic | 35.0% | |
| ATTACTTATAAGCGCTCTCT+GGG | - | chr1.4:7923848-7923867 | None:intergenic | 35.0% | |
| ATTCCACTCATCAGACATTA+CGG | - | chr1.4:7924294-7924313 | None:intergenic | 35.0% | |
| ATTTAAAGGAACAAGCTCCA+AGG | - | chr1.4:7926199-7926218 | None:intergenic | 35.0% | |
| CAAACTCCTGCATATTCAAA+GGG | - | chr1.4:7925630-7925649 | None:intergenic | 35.0% | |
| CAACTCCTATATGCAATATC+AGG | + | chr1.4:7925754-7925773 | MS.gene51539:CDS | 35.0% | |
| CAGATAGGTTTAAGAATCCA+TGG | - | chr1.4:7923353-7923372 | None:intergenic | 35.0% | |
| CATGGATTCTTAAACCTATC+TGG | + | chr1.4:7923351-7923370 | MS.gene51539:CDS | 35.0% | |
| CTAATGGGATATCTGAATAC+AGG | + | chr1.4:7925290-7925309 | MS.gene51539:intron | 35.0% | |
| CTATTGATGCTTGTATTGCA+AGG | + | chr1.4:7923552-7923571 | MS.gene51539:CDS | 35.0% | |
| CTTAATGTAACCACTCATGA+AGG | + | chr1.4:7924699-7924718 | MS.gene51539:CDS | 35.0% | |
| CTTGCATAATGAAAAGAAGC+AGG | + | chr1.4:7924413-7924432 | MS.gene51539:CDS | 35.0% | |
| GAAAGGAACATGTAAAGAGA+TGG | - | chr1.4:7924672-7924691 | None:intergenic | 35.0% | |
| GAATCACAGGTAAAATAAGG+TGG | + | chr1.4:7925866-7925885 | MS.gene51539:CDS | 35.0% | |
| GCAGGAATATTCCTAGTATA+TGG | + | chr1.4:7923212-7923231 | MS.gene51539:CDS | 35.0% | |
| GGCTATTGATGAAAATCAGA+CGG | + | chr1.4:7925212-7925231 | MS.gene51539:intron | 35.0% | |
| GGTTTCTTTGTTCATCATCT+TGG | + | chr1.4:7923668-7923687 | MS.gene51539:CDS | 35.0% | |
| GTAAGTTCGGTAAATAAGTC+TGG | - | chr1.4:7924860-7924879 | None:intergenic | 35.0% | |
| GTGCAAATAGGCTTATGATA+TGG | - | chr1.4:7924463-7924482 | None:intergenic | 35.0% | |
| TGATATTGATGAAGAGACCT+TGG | + | chr1.4:7926179-7926198 | MS.gene51539:CDS | 35.0% | |
| TGGATTCTTAAACCTATCTG+GGG | + | chr1.4:7923353-7923372 | MS.gene51539:CDS | 35.0% | |
| TTAAAAGAACAGCCAACCAT+AGG | - | chr1.4:7926053-7926072 | None:intergenic | 35.0% | |
| TTACATTAAGAGCAAGGGAA+AGG | - | chr1.4:7924689-7924708 | None:intergenic | 35.0% | |
| TTATATCAAAATGGGGTGGA+GGG | + | chr1.4:7925983-7926002 | MS.gene51539:CDS | 35.0% | |
| TTGAATATGCAGGAGTTTGT+TGG | + | chr1.4:7925631-7925650 | MS.gene51539:intron | 35.0% | |
| TTTGTGCTTAGTACCATCAT+AGG | - | chr1.4:7925895-7925914 | None:intergenic | 35.0% | |
| ! | ATGTGTATTGATAGCATTGG+TGG | + | chr1.4:7925958-7925977 | MS.gene51539:CDS | 35.0% |
| ! | CAATAAAGTATCCTCAAGCA+TGG | + | chr1.4:7924643-7924662 | MS.gene51539:CDS | 35.0% |
| ! | CAGATGATTAAGGACTTGTT+TGG | + | chr1.4:7925338-7925357 | MS.gene51539:intron | 35.0% |
| ! | CTTTTCATTATGCAAGCCAA+TGG | - | chr1.4:7924409-7924428 | None:intergenic | 35.0% |
| ! | TCAGGTACCTCTCATATTTT+AGG | + | chr1.4:7924767-7924786 | MS.gene51539:intron | 35.0% |
| ! | TTAAGGACTTGTTTGGACTT+TGG | + | chr1.4:7925345-7925364 | MS.gene51539:intron | 35.0% |
| !! | TCACCTTTTTAGTCTCTGTT+TGG | - | chr1.4:7925561-7925580 | None:intergenic | 35.0% |
| !! | TGGTGGCCTTATATCAAAAT+GGG | + | chr1.4:7925975-7925994 | MS.gene51539:CDS | 35.0% |
| !! | TTGGTGGCCTTATATCAAAA+TGG | + | chr1.4:7925974-7925993 | MS.gene51539:CDS | 35.0% |
| AAAGAACTGCTGTACTGTAC+AGG | - | chr1.4:7924196-7924215 | None:intergenic | 40.0% | |
| AATAAGGTGGATGCCTATGA+TGG | + | chr1.4:7925879-7925898 | MS.gene51539:CDS | 40.0% | |
| AATCTATGCAATTGGTGCAG+TGG | + | chr1.4:7925657-7925676 | MS.gene51539:CDS | 40.0% | |
| AATGTAGGAACGACAATTCG+AGG | + | chr1.4:7924609-7924628 | MS.gene51539:CDS | 40.0% | |
| ACGTAGAGTTGAACTGTTGA+AGG | - | chr1.4:7923314-7923333 | None:intergenic | 40.0% | |
| ACTCCAGCAACGACAAAATA+AGG | - | chr1.4:7923422-7923441 | None:intergenic | 40.0% | |
| AGAGTTGAACTGTTGAAGGT+TGG | - | chr1.4:7923310-7923329 | None:intergenic | 40.0% | |
| AGCTAACTGCAGTGACTAAT+GGG | + | chr1.4:7925275-7925294 | MS.gene51539:intron | 40.0% | |
| AGGATTGGAGTTGAGCAATT+TGG | + | chr1.4:7923942-7923961 | MS.gene51539:intron | 40.0% | |
| AGTCACTATGGTTGAGATCT+CGG | + | chr1.4:7924812-7924831 | MS.gene51539:intron | 40.0% | |
| ATACCGTAATGTCTGATGAG+TGG | + | chr1.4:7924288-7924307 | MS.gene51539:intron | 40.0% | |
| ATGGTTGAGATCTCGGTTAT+TGG | + | chr1.4:7924819-7924838 | MS.gene51539:intron | 40.0% | |
| CACTTGTGGAAACTGTTTAG+GGG | + | chr1.4:7925401-7925420 | MS.gene51539:intron | 40.0% | |
| CTAAACCCAACATTCATAGC+AGG | + | chr1.4:7923194-7923213 | MS.gene51539:CDS | 40.0% | |
| CTAGTATATGGTATAGGCCA+AGG | + | chr1.4:7923224-7923243 | MS.gene51539:CDS | 40.0% | |
| CTATGAATGTTGGGTTTAGG+TGG | - | chr1.4:7923193-7923212 | None:intergenic | 40.0% | |
| CTATGTCCATTAGGAGTTGA+AGG | + | chr1.4:7925916-7925935 | MS.gene51539:CDS | 40.0% | |
| CTCATTTCACAAACCTCAGA+AGG | - | chr1.4:7926150-7926169 | None:intergenic | 40.0% | |
| CTGCTATGAATGTTGGGTTT+AGG | - | chr1.4:7923196-7923215 | None:intergenic | 40.0% | |
| CTTATATCAAAATGGGGTGG+AGG | + | chr1.4:7925982-7926001 | MS.gene51539:CDS | 40.0% | |
| CTTCTTGGTTATCTTGCTAG+TGG | + | chr1.4:7923647-7923666 | MS.gene51539:CDS | 40.0% | |
| CTTGGCCTATACCATATACT+AGG | - | chr1.4:7923226-7923245 | None:intergenic | 40.0% | |
| GAAGGAATCAACTCCTCATA+AGG | - | chr1.4:7926132-7926151 | None:intergenic | 40.0% | |
| GAGTGGTTACATTAAGAGCA+AGG | - | chr1.4:7924695-7924714 | None:intergenic | 40.0% | |
| GATGCTGCTATAAGAATCAC+AGG | + | chr1.4:7925853-7925872 | MS.gene51539:CDS | 40.0% | |
| GTAAAAATGGCCTTCATGAG+TGG | - | chr1.4:7924712-7924731 | None:intergenic | 40.0% | |
| GTGCAGTGGCTTCAATAATA+GGG | + | chr1.4:7925671-7925690 | MS.gene51539:CDS | 40.0% | |
| TAGCTAACTGCAGTGACTAA+TGG | + | chr1.4:7925274-7925293 | MS.gene51539:intron | 40.0% | |
| TCAACAGTTCAACTCTACGT+AGG | + | chr1.4:7923314-7923333 | MS.gene51539:CDS | 40.0% | |
| TCAGGGTTAGAAAAGTCTCA+AGG | + | chr1.4:7923822-7923841 | MS.gene51539:intron | 40.0% | |
| TGAACTTTGCGCAATTGCTT+CGG | + | chr1.4:7925250-7925269 | MS.gene51539:intron | 40.0% | |
| TGCAGTGGCTTCAATAATAG+GGG | + | chr1.4:7925672-7925691 | MS.gene51539:CDS | 40.0% | |
| TTGCGCAAAGTTCAGTACAT+CGG | - | chr1.4:7925244-7925263 | None:intergenic | 40.0% | |
| TTGGAGTTGAGCAATTTGGT+TGG | + | chr1.4:7923946-7923965 | MS.gene51539:intron | 40.0% | |
| TTTACGGTCAGTAGTCACTA+TGG | + | chr1.4:7924800-7924819 | MS.gene51539:intron | 40.0% | |
| TTTCCTCCCTTTGAATATGC+AGG | + | chr1.4:7925621-7925640 | MS.gene51539:intron | 40.0% | |
| ! | AGGAATAGTATTGAGGTTCC+AGG | + | chr1.4:7923572-7923591 | MS.gene51539:CDS | 40.0% |
| ! | CCTGCATTGACAATTGTTCT+GGG | + | chr1.4:7924360-7924379 | MS.gene51539:CDS | 40.0% |
| ! | CTGATTTGCAGAGTTTGTGT+GGG | + | chr1.4:7923603-7923622 | MS.gene51539:CDS | 40.0% |
| ! | GGAATAGTATTGAGGTTCCA+GGG | + | chr1.4:7923573-7923592 | MS.gene51539:CDS | 40.0% |
| ! | TCCTGCATTGACAATTGTTC+TGG | + | chr1.4:7924359-7924378 | MS.gene51539:CDS | 40.0% |
| !! | CTCCACCCCATTTTGATATA+AGG | - | chr1.4:7925984-7926003 | None:intergenic | 40.0% |
| !! | GGTGGCCTTATATCAAAATG+GGG | + | chr1.4:7925976-7925995 | MS.gene51539:CDS | 40.0% |
| !! | TAGGGGGTATTGGAAAATGT+AGG | + | chr1.4:7924594-7924613 | MS.gene51539:intron | 40.0% |
| !!! | AGTTTGTGTGGGTTTTGTTC+TGG | + | chr1.4:7923614-7923633 | MS.gene51539:CDS | 40.0% |
| !!! | CTCATGAAGGCCATTTTTAC+TGG | + | chr1.4:7924712-7924731 | MS.gene51539:CDS | 40.0% |
| !!! | TTGTTATTTTAGGGGTCGCT+TGG | + | chr1.4:7924321-7924340 | MS.gene51539:intron | 40.0% |
| ACTCCTGCATATTCAAAGGG+AGG | - | chr1.4:7925627-7925646 | None:intergenic | 45.0% | |
| CCACACAAACTCTGCAAATC+AGG | - | chr1.4:7923605-7923624 | None:intergenic | 45.0% | |
| CCCAGAACAATTGTCAATGC+AGG | - | chr1.4:7924363-7924382 | None:intergenic | 45.0% | |
| GGTGCAGTGGCTTCAATAAT+AGG | + | chr1.4:7925670-7925689 | MS.gene51539:CDS | 45.0% | |
| GGTTACATTCAGTGACTACC+AGG | + | chr1.4:7924904-7924923 | MS.gene51539:intron | 45.0% | |
| GTTAGTCGTGTCACAACTCA+GGG | + | chr1.4:7923805-7923824 | MS.gene51539:intron | 45.0% | |
| TCCTCATAAGGCCCAACATT+AGG | - | chr1.4:7926120-7926139 | None:intergenic | 45.0% | |
| TGTTCATCATCTTGGTCCTC+AGG | + | chr1.4:7923676-7923695 | MS.gene51539:CDS | 45.0% | |
| TTGTCGTTGCTGGAGTTGTT+GGG | + | chr1.4:7923426-7923445 | MS.gene51539:CDS | 45.0% | |
| TTTGTCGTTGCTGGAGTTGT+TGG | + | chr1.4:7923425-7923444 | MS.gene51539:CDS | 45.0% | |
| ! | CATTCTAACCGACGCTTTTC+CGG | + | chr1.4:7923376-7923395 | MS.gene51539:CDS | 45.0% |
| ! | CCTGATTTGCAGAGTTTGTG+TGG | + | chr1.4:7923602-7923621 | MS.gene51539:CDS | 45.0% |
| ! | GGCCTTATATCAAAATGGGG+TGG | + | chr1.4:7925979-7925998 | MS.gene51539:CDS | 45.0% |
| ! | TAGTATTGAGGTTCCAGGGT+TGG | + | chr1.4:7923577-7923596 | MS.gene51539:CDS | 45.0% |
| ! | TCCTAATGTTGGGCCTTATG+AGG | + | chr1.4:7926116-7926135 | MS.gene51539:CDS | 45.0% |
| ! | TGAGGAGTTGATTCCTTCTG+AGG | + | chr1.4:7926134-7926153 | MS.gene51539:CDS | 45.0% |
| !! | TTCCGGTAATGGGATATCGT+CGG | + | chr1.4:7923393-7923412 | MS.gene51539:CDS | 45.0% |
| !!! | AGGCCTTATTTTGTCGTTGC+TGG | + | chr1.4:7923416-7923435 | MS.gene51539:CDS | 45.0% |
| !!! | GCGGCATTGATGTGTTTTGT+TGG | + | chr1.4:7923497-7923516 | MS.gene51539:CDS | 45.0% |
| !!! | TGTGGGTTTTGTTCTGGTTC+TGG | + | chr1.4:7923620-7923639 | MS.gene51539:CDS | 45.0% |
| AGAGATGGCTTCCATGCTTG+AGG | - | chr1.4:7924657-7924676 | None:intergenic | 50.0% | |
| CTACCAGGATTTCTGACTGC+AGG | + | chr1.4:7924919-7924938 | MS.gene51539:intron | 50.0% | |
| CTCCGACGATATCCCATTAC+CGG | - | chr1.4:7923398-7923417 | None:intergenic | 50.0% | |
| GGTGTCTGCTACGATTGTTG+CGG | + | chr1.4:7923451-7923470 | MS.gene51539:CDS | 50.0% | |
| TCGGTTAGAATGCCCCAGAT+AGG | - | chr1.4:7923368-7923387 | None:intergenic | 50.0% | |
| TCTGCTACGATTGTTGCGGT+TGG | + | chr1.4:7923455-7923474 | MS.gene51539:CDS | 50.0% | |
| TTGCCTGCAGTCAGAAATCC+TGG | - | chr1.4:7924925-7924944 | None:intergenic | 50.0% | |
| ! | AACCGACGCTTTTCCGGTAA+TGG | + | chr1.4:7923382-7923401 | MS.gene51539:CDS | 50.0% |
| ! | ACCGACGCTTTTCCGGTAAT+GGG | + | chr1.4:7923383-7923402 | MS.gene51539:CDS | 50.0% |
| ! | GAGGTACCTGAGAGAATGCA+GGG | - | chr1.4:7924758-7924777 | None:intergenic | 50.0% |
| ! | GGTTAGTCGTGTCACAACTC+AGG | + | chr1.4:7923804-7923823 | MS.gene51539:intron | 50.0% |
| ! | TCCCATTACCGGAAAAGCGT+CGG | - | chr1.4:7923387-7923406 | None:intergenic | 50.0% |
| !! | AGAGGTACCTGAGAGAATGC+AGG | - | chr1.4:7924759-7924778 | None:intergenic | 50.0% |
| !! | TCTGGTTCTGGTGCTCTTCT+TGG | + | chr1.4:7923632-7923651 | MS.gene51539:CDS | 50.0% |
| !! | TTAGGGGTCGCTTGGTCTTA+TGG | + | chr1.4:7924329-7924348 | MS.gene51539:intron | 50.0% |
| AGAGTGAGCCTGTGAAGCCT+TGG | - | chr1.4:7923244-7923263 | None:intergenic | 55.0% | |
| AGGTGAGGTGAGTGTGGTTG+CGG | + | chr1.4:7923478-7923497 | MS.gene51539:CDS | 55.0% | |
| CGTTGCTGGAGTTGTTGGGA+CGG | + | chr1.4:7923430-7923449 | MS.gene51539:CDS | 55.0% | |
| GATTGTTGCGGTTGGAGGTG+AGG | + | chr1.4:7923463-7923482 | MS.gene51539:CDS | 55.0% | |
| GCTACGATTGTTGCGGTTGG+AGG | + | chr1.4:7923458-7923477 | MS.gene51539:CDS | 55.0% | |
| GGTATAGGCCAAGGCTTCAC+AGG | + | chr1.4:7923233-7923252 | MS.gene51539:CDS | 55.0% | |
| TGCAAATCAGGAGCCAACCC+TGG | - | chr1.4:7923593-7923612 | None:intergenic | 55.0% | |
| !! | CGGTAATGGGATATCGTCGG+AGG | + | chr1.4:7923396-7923415 | MS.gene51539:CDS | 55.0% |
| AGTCGGCCCTGCATTCTCTC+AGG | + | chr1.4:7924749-7924768 | MS.gene51539:CDS | 60.0% | |
| GGTTGGAGGTGAGGTGAGTG+TGG | + | chr1.4:7923472-7923491 | MS.gene51539:CDS | 60.0% | |
| !! | GGGGTCGCTTGGTCTTATGG+CGG | + | chr1.4:7924332-7924351 | MS.gene51539:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 7923179 | 7926236 | 7923179 | ID=MS.gene51539 |
| chr1.4 | mRNA | 7923179 | 7926236 | 7923179 | ID=MS.gene51539.t1;Parent=MS.gene51539 |
| chr1.4 | exon | 7923179 | 7923697 | 7923179 | ID=MS.gene51539.t1.exon1;Parent=MS.gene51539.t1 |
| chr1.4 | CDS | 7923179 | 7923697 | 7923179 | ID=cds.MS.gene51539.t1;Parent=MS.gene51539.t1 |
| chr1.4 | exon | 7924333 | 7924434 | 7924333 | ID=MS.gene51539.t1.exon2;Parent=MS.gene51539.t1 |
| chr1.4 | CDS | 7924333 | 7924434 | 7924333 | ID=cds.MS.gene51539.t1;Parent=MS.gene51539.t1 |
| chr1.4 | exon | 7924597 | 7924770 | 7924597 | ID=MS.gene51539.t1.exon3;Parent=MS.gene51539.t1 |
| chr1.4 | CDS | 7924597 | 7924770 | 7924597 | ID=cds.MS.gene51539.t1;Parent=MS.gene51539.t1 |
| chr1.4 | exon | 7925643 | 7926236 | 7925643 | ID=MS.gene51539.t1.exon4;Parent=MS.gene51539.t1 |
| chr1.4 | CDS | 7925643 | 7926236 | 7925643 | ID=cds.MS.gene51539.t1;Parent=MS.gene51539.t1 |
| Gene Sequence |
| Protein sequence |
