Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52362.t1 | XP_013460874.1 | 96.2 | 212 | 8 | 0 | 1 | 212 | 49 | 260 | 3.50E-114 | 421 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52362.t1 | Q8LBV4 | 67.1 | 213 | 66 | 4 | 3 | 212 | 62 | 273 | 8.3e-80 | 298.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52362.t1 | A0A072V0M9 | 96.2 | 212 | 8 | 0 | 1 | 212 | 49 | 260 | 2.6e-114 | 421.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene52362 | 0.848762 | 4.99E-60 | -1.69E-46 |
| MS.gene049657 | MS.gene52362 | 0.806409 | 8.34E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene52362 | 0.81716 | 3.81E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene52362 | 0.815899 | 7.30E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene52362 | 0.80458 | 2.02E-49 | -1.69E-46 |
| MS.gene052066 | MS.gene52362 | 0.804169 | 2.46E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene52362 | 0.814028 | 1.90E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene52362 | 0.82724 | 1.75E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene52362 | 0.810998 | 8.72E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene52362 | 0.802053 | 6.73E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene52362 | 0.823963 | 1.04E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene52362 | 0.803436 | 3.49E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene52362 | 0.821712 | 3.49E-53 | -1.69E-46 |
| MS.gene056510 | MS.gene52362 | 0.823424 | 1.40E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene52362 | 0.80194 | 7.10E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene52362 | 0.821525 | 3.85E-53 | -1.69E-46 |
| MS.gene060339 | MS.gene52362 | 0.807674 | 4.50E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene52362 | 0.820208 | 7.74E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene52362 | 0.812694 | 3.73E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52362.t1 | MTR_3g074250 | 96.226 | 212 | 8 | 0 | 1 | 212 | 49 | 260 | 1.63e-153 | 430 |
| MS.gene52362.t1 | MTR_2g450530 | 56.853 | 197 | 84 | 1 | 16 | 212 | 70 | 265 | 2.14e-79 | 242 |
| MS.gene52362.t1 | MTR_2g450530 | 60.000 | 175 | 69 | 1 | 38 | 212 | 27 | 200 | 1.63e-74 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52362.t1 | AT1G78140 | 66.977 | 215 | 67 | 4 | 1 | 212 | 60 | 273 | 6.87e-105 | 307 |
| MS.gene52362.t1 | AT2G41040 | 54.040 | 198 | 89 | 2 | 16 | 212 | 79 | 275 | 7.09e-74 | 228 |
Find 46 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGCAGAGATACTATTTC+TGG | 0.142342 | 3.1:-60804381 | MS.gene52362:intron |
| TAGAAATTTGCGTACTCTTT+TGG | 0.203851 | 3.1:+60802695 | None:intergenic |
| GTTCATAATCCTTTCTCATT+TGG | 0.319744 | 3.1:-60799254 | MS.gene52362:intron |
| GGTTTCCTAAAACCAGTATT+AGG | 0.339433 | 3.1:-60802866 | MS.gene52362:CDS |
| ATGATATTTCCACCTAATAC+TGG | 0.344800 | 3.1:+60802854 | None:intergenic |
| ATAAGTAATGCTAAGAACTA+TGG | 0.406172 | 3.1:-60804288 | MS.gene52362:CDS |
| CATTGATAAAGCAGGATTAG+TGG | 0.440360 | 3.1:+60804911 | None:intergenic |
| ATTAGATTAACCTCTTTCTC+AGG | 0.446725 | 3.1:+60803558 | None:intergenic |
| TAGACTATTCATCATCTAAT+CGG | 0.451311 | 3.1:+60798482 | None:intergenic |
| GCTGCAGTTTGAACAGATGA+AGG | 0.460531 | 3.1:-60802888 | MS.gene52362:intron |
| TACTAGGAGCAGCAATCCCT+TGG | 0.465249 | 3.1:-60804967 | MS.gene52362:CDS |
| ATGTTATGAATTTGTTCAGC+AGG | 0.472552 | 3.1:-60802729 | MS.gene52362:CDS |
| TTCAAGATGTGTTTGGTCAC+CGG | 0.480075 | 3.1:+60804320 | None:intergenic |
| CTGAAAAGCTCAGTGGAAGC+TGG | 0.480418 | 3.1:+60804255 | None:intergenic |
| ATCGATGCTAGTTGTGGAAG+TGG | 0.499787 | 3.1:-60802833 | MS.gene52362:CDS |
| TCGTGAGTTCAAGATGTGTT+TGG | 0.506505 | 3.1:+60804313 | None:intergenic |
| CAGGAGCAGCTCTTCACTGT+TGG | 0.508797 | 3.1:-60802486 | MS.gene52362:CDS |
| TTAACCTCTTTCTCAGGACC+TGG | 0.515325 | 3.1:+60803564 | None:intergenic |
| GGATTCCGTTGTAGTAGAGA+AGG | 0.522116 | 3.1:-60804994 | MS.gene52362:CDS |
| TCCTGCATGCACAGCATCGA+TGG | 0.526627 | 3.1:+60802504 | None:intergenic |
| TCCATCGATGCTGTGCATGC+AGG | 0.527473 | 3.1:-60802505 | MS.gene52362:CDS |
| CATTTCTCTATGAGAGGGGC+TGG | 0.529730 | 3.1:-60803617 | MS.gene52362:CDS |
| CCAACTTACATTGATAAAGC+AGG | 0.535319 | 3.1:+60804903 | None:intergenic |
| TGGTATCATTTCTCTATGAG+AGG | 0.543088 | 3.1:-60803623 | MS.gene52362:CDS |
| CTGCAGTTTGAACAGATGAA+GGG | 0.547037 | 3.1:-60802887 | MS.gene52362:intron |
| GGTATCATTTCTCTATGAGA+GGG | 0.554274 | 3.1:-60803622 | MS.gene52362:CDS |
| TAGTAGAGAAGGAAGTTACT+AGG | 0.556624 | 3.1:-60804983 | MS.gene52362:CDS |
| TCGATGGAACTTGAAACAAA+AGG | 0.560574 | 3.1:+60802520 | None:intergenic |
| AAAACCACCCCATACAGAAA+AGG | 0.561587 | 3.1:+60803587 | None:intergenic |
| ACCTGTCAGAAAACATATAC+CGG | 0.561836 | 3.1:-60804339 | MS.gene52362:CDS |
| TTCCTAAAACCAGTATTAGG+TGG | 0.565845 | 3.1:-60802863 | MS.gene52362:CDS |
| GTCAACGAGCTATAACATAC+AGG | 0.571304 | 3.1:+60804939 | None:intergenic |
| AACTTCCTTCTCTACTACAA+CGG | 0.578213 | 3.1:+60804989 | None:intergenic |
| ATAACATACAGGACAAGCCA+AGG | 0.583911 | 3.1:+60804950 | None:intergenic |
| AATATCATCGATGCTAGTTG+TGG | 0.584800 | 3.1:-60802839 | MS.gene52362:CDS |
| CTTACAGCTGCTGATGGTGA+AGG | 0.590848 | 3.1:+60802463 | None:intergenic |
| TATGTTATAGCTCGTTGACA+TGG | 0.598933 | 3.1:-60804935 | MS.gene52362:CDS |
| TATTCACTTACAGCTGCTGA+TGG | 0.608738 | 3.1:+60802457 | None:intergenic |
| GTATCATTTCTCTATGAGAG+GGG | 0.632193 | 3.1:-60803621 | MS.gene52362:CDS |
| AAATGAGAAAGGATTATGAA+CGG | 0.662744 | 3.1:+60799256 | None:intergenic |
| TTGTTGAATCAGGATGCCGC+TGG | 0.670749 | 3.1:-60803643 | MS.gene52362:intron |
| TCATAGAGAAATGATACCAG+CGG | 0.679287 | 3.1:+60803627 | None:intergenic |
| TGAGAAAGGATTATGAACGG+TGG | 0.685732 | 3.1:+60799259 | None:intergenic |
| TAACATACAGGACAAGCCAA+GGG | 0.696599 | 3.1:+60804951 | None:intergenic |
| ACTACTCAGAGAACATGTTG+AGG | 0.710121 | 3.1:-60802754 | MS.gene52362:CDS |
| TGCATGCCTGAAAAGCTCAG+TGG | 0.723162 | 3.1:+60804248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAAAATTAAAGATTAAAA+AGG | + | chr3.1:60799277-60799296 | None:intergenic | 10.0% |
| !! | TATTTAAAAAAAATAAGTGA+TGG | + | chr3.1:60803202-60803221 | None:intergenic | 10.0% |
| !!! | AATCTCTTTTTTTTTTTTTT+TGG | + | chr3.1:60804916-60804935 | None:intergenic | 10.0% |
| !!! | ATGAATTAATTTTAGTTTAA+AGG | - | chr3.1:60798806-60798825 | MS.gene52362:intron | 10.0% |
| !!! | GGTTTTTTTTTTTTTTTAAA+CGG | - | chr3.1:60804953-60804972 | MS.gene52362:CDS | 10.0% |
| !!! | TAATTCAAAATTGATTTTAT+AGG | + | chr3.1:60798981-60799000 | None:intergenic | 10.0% |
| !!! | TGAATTAATTTTAGTTTAAA+GGG | - | chr3.1:60798807-60798826 | MS.gene52362:intron | 10.0% |
| !!! | TTTTAATCTTTAATTTTATC+TGG | - | chr3.1:60799277-60799296 | MS.gene52362:intron | 10.0% |
| !!! | TTTTTTTTTTTCTTTCAATA+TGG | - | chr3.1:60799986-60800005 | MS.gene52362:intron | 10.0% |
| !! | AAAAATATGAAATCATGTAA+TGG | + | chr3.1:60804407-60804426 | None:intergenic | 15.0% |
| !! | AAATATCAATATAAGATGAT+TGG | - | chr3.1:60804025-60804044 | MS.gene52362:intron | 15.0% |
| !! | AACAAATTAAGATAAAACTA+AGG | - | chr3.1:60802622-60802641 | MS.gene52362:intron | 15.0% |
| !! | AATAATATATATTTGATGGA+AGG | - | chr3.1:60802817-60802836 | MS.gene52362:CDS | 15.0% |
| !! | ACAAAATATAACTAAAACAT+GGG | + | chr3.1:60803930-60803949 | None:intergenic | 15.0% |
| !! | ACATGATTAAAATATGAAAA+AGG | + | chr3.1:60799636-60799655 | None:intergenic | 15.0% |
| !! | ATATTAAAATTATCTTGTTG+AGG | - | chr3.1:60800495-60800514 | MS.gene52362:intron | 15.0% |
| !! | CATCAAATATATATTATTCT+AGG | + | chr3.1:60802815-60802834 | None:intergenic | 15.0% |
| !! | CCAACAATATTAAATATAAA+TGG | - | chr3.1:60799464-60799483 | MS.gene52362:intron | 15.0% |
| !! | CCATTTATATTTAATATTGT+TGG | + | chr3.1:60799467-60799486 | None:intergenic | 15.0% |
| !! | CTAGAATAATATATATTTGA+TGG | - | chr3.1:60802813-60802832 | MS.gene52362:CDS | 15.0% |
| !! | TGAAAGAAAAAAAAAAATGT+GGG | + | chr3.1:60799983-60800002 | None:intergenic | 15.0% |
| !! | TTGAAAGAAAAAAAAAAATG+TGG | + | chr3.1:60799984-60800003 | None:intergenic | 15.0% |
| !!! | AACTAATATTTTATTTGTTC+TGG | - | chr3.1:60804525-60804544 | MS.gene52362:intron | 15.0% |
| !!! | AATTTTGAATTATTCAAACT+TGG | - | chr3.1:60798989-60799008 | MS.gene52362:intron | 15.0% |
| !!! | ACAATTTTATCAACATTTAT+GGG | + | chr3.1:60803653-60803672 | None:intergenic | 15.0% |
| !!! | TACAATTTTATCAACATTTA+TGG | + | chr3.1:60803654-60803673 | None:intergenic | 15.0% |
| !!! | TGTTATTCTATTTTTTTAGA+GGG | - | chr3.1:60804327-60804346 | MS.gene52362:CDS | 15.0% |
| !!! | TTACTAGTTTAGTATAAATA+GGG | + | chr3.1:60803410-60803429 | None:intergenic | 15.0% |
| !!! | TTGTTATTCTATTTTTTTAG+AGG | - | chr3.1:60804326-60804345 | MS.gene52362:CDS | 15.0% |
| !!! | TTTGAAATATAAACTACTTA+TGG | - | chr3.1:60801217-60801236 | MS.gene52362:intron | 15.0% |
| !!! | TTTTATCTTAATTTGTTTGA+GGG | + | chr3.1:60802619-60802638 | None:intergenic | 15.0% |
| !! | AAAGAAAACAATAAAGTTGA+AGG | + | chr3.1:60802478-60802497 | None:intergenic | 20.0% |
| !! | AAGAAAACAATAAAGTTGAA+GGG | + | chr3.1:60802477-60802496 | None:intergenic | 20.0% |
| !! | AATTACTTCCATTAAAACAT+CGG | + | chr3.1:60800846-60800865 | None:intergenic | 20.0% |
| !! | AATTATTCATCAACATAACA+TGG | + | chr3.1:60804762-60804781 | None:intergenic | 20.0% |
| !! | AGAATATAAATCAAGTATCA+GGG | - | chr3.1:60801992-60802011 | MS.gene52362:intron | 20.0% |
| !! | ATGTACAATAATTTATAGAC+CGG | + | chr3.1:60802852-60802871 | None:intergenic | 20.0% |
| !! | CAAAATATAACTAAAACATG+GGG | + | chr3.1:60803929-60803948 | None:intergenic | 20.0% |
| !! | CGATTCGTTATTAATTAATT+TGG | + | chr3.1:60804606-60804625 | None:intergenic | 20.0% |
| !! | CTATTTATACTAAACTAGTA+AGG | - | chr3.1:60803409-60803428 | MS.gene52362:intron | 20.0% |
| !! | GACAAAATATAACTAAAACA+TGG | + | chr3.1:60803931-60803950 | None:intergenic | 20.0% |
| !! | TAAATTTAGCATATAAGCAA+GGG | - | chr3.1:60802585-60802604 | MS.gene52362:intron | 20.0% |
| !! | TAGAATATAAATCAAGTATC+AGG | - | chr3.1:60801991-60802010 | MS.gene52362:intron | 20.0% |
| !! | TGGATATATCATATATCTAA+TGG | - | chr3.1:60799484-60799503 | MS.gene52362:intron | 20.0% |
| !! | TTAAATTTAGCATATAAGCA+AGG | - | chr3.1:60802584-60802603 | MS.gene52362:intron | 20.0% |
| !! | TTAATATTTACTCTTCTGTT+CGG | - | chr3.1:60803248-60803267 | MS.gene52362:intron | 20.0% |
| !!! | AAACGGAATTATATTGATTT+AGG | - | chr3.1:60804970-60804989 | MS.gene52362:CDS | 20.0% |
| !!! | AAGTTCAAGATTTTTTTTTC+TGG | + | chr3.1:60799545-60799564 | None:intergenic | 20.0% |
| !!! | ACATGATTTCATATTTTTAC+CGG | - | chr3.1:60804409-60804428 | MS.gene52362:intron | 20.0% |
| !!! | ATCTAATAGACTTTTTCTTT+GGG | - | chr3.1:60803703-60803722 | MS.gene52362:intron | 20.0% |
| !!! | ATGATAATGTCAAGAAATAA+AGG | + | chr3.1:60802188-60802207 | None:intergenic | 20.0% |
| !!! | ATTAATAAATTTGAGTTTGC+AGG | - | chr3.1:60798683-60798702 | MS.gene52362:intron | 20.0% |
| !!! | ATTCTTGGTATTTGTTATAT+AGG | - | chr3.1:60800090-60800109 | MS.gene52362:intron | 20.0% |
| !!! | CTTACTAGTTTAGTATAAAT+AGG | + | chr3.1:60803411-60803430 | None:intergenic | 20.0% |
| !!! | GAATATCTTTTGAAATGATT+TGG | - | chr3.1:60801098-60801117 | MS.gene52362:intron | 20.0% |
| !!! | GTTTTATCTTAATTTGTTTG+AGG | + | chr3.1:60802620-60802639 | None:intergenic | 20.0% |
| !!! | TATCTAATAGACTTTTTCTT+TGG | - | chr3.1:60803702-60803721 | MS.gene52362:intron | 20.0% |
| !!! | TCAAAAACTACAATTAGTTT+TGG | + | chr3.1:60798786-60798805 | None:intergenic | 20.0% |
| !!! | TGATATGCGTTTTTTTTTTT+TGG | - | chr3.1:60804644-60804663 | MS.gene52362:intron | 20.0% |
| !!! | TTATATCAAGTTTTGAATAG+TGG | - | chr3.1:60801950-60801969 | MS.gene52362:intron | 20.0% |
| !!! | TTCTAAAATGACAAACAAAT+TGG | + | chr3.1:60801976-60801995 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGTCAAGATGTT+TGG | - | chr3.1:60803996-60804015 | MS.gene52362:intron | 20.0% |
| ! | AAAAAGGGAAAAAAAAGACA+GGG | + | chr3.1:60799261-60799280 | None:intergenic | 25.0% |
| ! | AAACTCCTTATAAAACAATG+TGG | + | chr3.1:60799592-60799611 | None:intergenic | 25.0% |
| ! | AAATGAGAAAGGATTATGAA+CGG | + | chr3.1:60804226-60804245 | None:intergenic | 25.0% |
| ! | AAATGGAAATTATAGAGGAA+AGG | + | chr3.1:60801334-60801353 | None:intergenic | 25.0% |
| ! | AACATAACATGGTTATAACA+TGG | + | chr3.1:60804751-60804770 | None:intergenic | 25.0% |
| ! | AATAATCAAGACAAACTGAA+AGG | + | chr3.1:60800345-60800364 | None:intergenic | 25.0% |
| ! | AATATCCCTACTGAAAAAAA+GGG | + | chr3.1:60800050-60800069 | None:intergenic | 25.0% |
| ! | AATTTCTTCAATGTTACACA+TGG | + | chr3.1:60802971-60802990 | None:intergenic | 25.0% |
| ! | AGATTTGTAGTTCCTAAATT+AGG | - | chr3.1:60803048-60803067 | MS.gene52362:intron | 25.0% |
| ! | AGTTTGTCTTGATTATTGTT+TGG | - | chr3.1:60800348-60800367 | MS.gene52362:intron | 25.0% |
| ! | ATAAGTAATGCTAAGAACTA+TGG | - | chr3.1:60799191-60799210 | MS.gene52362:intron | 25.0% |
| ! | ATCGAGCAAGTAATTTAAAT+AGG | - | chr3.1:60804474-60804493 | MS.gene52362:intron | 25.0% |
| ! | ATTACTTCCATTAAAACATC+GGG | + | chr3.1:60800845-60800864 | None:intergenic | 25.0% |
| ! | CAAAAGAAATGTCCTAATTT+AGG | + | chr3.1:60803121-60803140 | None:intergenic | 25.0% |
| ! | CCAACATGAATTAAAATTTG+TGG | + | chr3.1:60798715-60798734 | None:intergenic | 25.0% |
| ! | CCTATAGTGAAAATATAAGA+CGG | - | chr3.1:60803007-60803026 | MS.gene52362:intron | 25.0% |
| ! | CTATATGTCAAACATGAAAA+GGG | - | chr3.1:60801891-60801910 | MS.gene52362:intron | 25.0% |
| ! | GAAGAAATTAAGAGACAAAT+CGG | - | chr3.1:60802982-60803001 | MS.gene52362:intron | 25.0% |
| ! | GATTTAAATGCATCAGAAAT+GGG | - | chr3.1:60802076-60802095 | MS.gene52362:intron | 25.0% |
| ! | GTAACTTATCCAAAATGTTA+CGG | + | chr3.1:60801250-60801269 | None:intergenic | 25.0% |
| ! | GTATAACTTTGAATCTGAAT+TGG | + | chr3.1:60801870-60801889 | None:intergenic | 25.0% |
| ! | GTGCTTATGATTGAATTATT+AGG | - | chr3.1:60799441-60799460 | MS.gene52362:intron | 25.0% |
| ! | TAAAAAGGGAAAAAAAAGAC+AGG | + | chr3.1:60799262-60799281 | None:intergenic | 25.0% |
| ! | TAATATCCCTACTGAAAAAA+AGG | + | chr3.1:60800051-60800070 | None:intergenic | 25.0% |
| ! | TAATATTTACTCTTCTGTTC+GGG | - | chr3.1:60803249-60803268 | MS.gene52362:intron | 25.0% |
| ! | TATAAAACTTGTGCCATATT+TGG | - | chr3.1:60801482-60801501 | MS.gene52362:intron | 25.0% |
| ! | TCAAGATTATTTGCAAAAAG+TGG | - | chr3.1:60800676-60800695 | MS.gene52362:intron | 25.0% |
| ! | TCGAGCAAGTAATTTAAATA+GGG | - | chr3.1:60804475-60804494 | MS.gene52362:intron | 25.0% |
| ! | TGGTACAAATAATTTAACCA+TGG | - | chr3.1:60801118-60801137 | MS.gene52362:intron | 25.0% |
| ! | TGTAAAGTATAAGAAGATTG+AGG | + | chr3.1:60804103-60804122 | None:intergenic | 25.0% |
| ! | TTTATGTTTCTTCATTGGAT+TGG | - | chr3.1:60799069-60799088 | MS.gene52362:intron | 25.0% |
| !! | AAAGTGTTTAAATAGACTTC+AGG | + | chr3.1:60804076-60804095 | None:intergenic | 25.0% |
| !! | AACTCAGTTTTTATCTTAAC+CGG | + | chr3.1:60804431-60804450 | None:intergenic | 25.0% |
| !! | AATATTCTCTTGCATTTTCA+TGG | + | chr3.1:60801643-60801662 | None:intergenic | 25.0% |
| !! | AATTAGGACATTTCTTTTGA+AGG | - | chr3.1:60803122-60803141 | MS.gene52362:intron | 25.0% |
| !! | ACAATACTGAATAAACCTTT+TGG | + | chr3.1:60801148-60801167 | None:intergenic | 25.0% |
| !! | ACATTTTTACCAAATGAGAA+AGG | + | chr3.1:60804237-60804256 | None:intergenic | 25.0% |
| !! | ATATTCTCTTGCATTTTCAT+GGG | + | chr3.1:60801642-60801661 | None:intergenic | 25.0% |
| !! | ATTTTCATGGGTATGTAAAA+TGG | + | chr3.1:60801630-60801649 | None:intergenic | 25.0% |
| !! | CAAATTCAAGTTTACAACAT+AGG | + | chr3.1:60799782-60799801 | None:intergenic | 25.0% |
| !! | CAAGTTAGAATTCATTTTGA+AGG | - | chr3.1:60798939-60798958 | MS.gene52362:intron | 25.0% |
| !! | CAATACTGAATAAACCTTTT+GGG | + | chr3.1:60801147-60801166 | None:intergenic | 25.0% |
| !! | CGTCTTATATTTTCACTATA+GGG | + | chr3.1:60803009-60803028 | None:intergenic | 25.0% |
| !! | CTTTTCATGTTTGACATATA+GGG | + | chr3.1:60801892-60801911 | None:intergenic | 25.0% |
| !! | TATTATTCTAGGAACTTCTA+TGG | + | chr3.1:60802804-60802823 | None:intergenic | 25.0% |
| !! | TCATAAACATTTCTTTTGCT+AGG | - | chr3.1:60800900-60800919 | MS.gene52362:intron | 25.0% |
| !! | TTCTTTTCCTTATGTATTTG+AGG | - | chr3.1:60802492-60802511 | MS.gene52362:CDS | 25.0% |
| !!! | AAAAAGTGGACTTTTTTCTT+TGG | - | chr3.1:60800690-60800709 | MS.gene52362:intron | 25.0% |
| !!! | AATCACCACATTGTTTTATA+AGG | - | chr3.1:60799584-60799603 | MS.gene52362:intron | 25.0% |
| !!! | ACAATTAGTTTTGGTATGTT+GGG | + | chr3.1:60798777-60798796 | None:intergenic | 25.0% |
| !!! | ACATTGTTTTATAAGGAGTT+TGG | - | chr3.1:60799591-60799610 | MS.gene52362:intron | 25.0% |
| !!! | ATACTTGTTTTTGCTTGTAT+TGG | + | chr3.1:60799364-60799383 | None:intergenic | 25.0% |
| !!! | ATATTTTATTTGTTCTGGTG+TGG | - | chr3.1:60804530-60804549 | MS.gene52362:intron | 25.0% |
| !!! | CATTGTTTTATAAGGAGTTT+GGG | - | chr3.1:60799592-60799611 | MS.gene52362:intron | 25.0% |
| !!! | CCACAAATTTTAATTCATGT+TGG | - | chr3.1:60798712-60798731 | MS.gene52362:intron | 25.0% |
| !!! | GATTAGTCGATTATTGATTT+AGG | - | chr3.1:60804932-60804951 | MS.gene52362:CDS | 25.0% |
| !!! | TACAATTAGTTTTGGTATGT+TGG | + | chr3.1:60798778-60798797 | None:intergenic | 25.0% |
| !!! | TATTTTATTTGTTCTGGTGT+GGG | - | chr3.1:60804531-60804550 | MS.gene52362:intron | 25.0% |
| !!! | TTAGGGTTTTATATATGTCA+CGG | - | chr3.1:60803844-60803863 | MS.gene52362:intron | 25.0% |
| !!! | TTTTTTTGAACTGTGTATGT+TGG | - | chr3.1:60799305-60799324 | MS.gene52362:intron | 25.0% |
| AAAATTATCTTGTTGAGGCA+TGG | - | chr3.1:60800500-60800519 | MS.gene52362:intron | 30.0% | |
| AAATTATCTTGTTGAGGCAT+GGG | - | chr3.1:60800501-60800520 | MS.gene52362:intron | 30.0% | |
| AACTTAGTGAGTTTATCTAC+TGG | + | chr3.1:60801559-60801578 | None:intergenic | 30.0% | |
| AATAAAGTTGAAGGGTCAAA+TGG | + | chr3.1:60802469-60802488 | None:intergenic | 30.0% | |
| ACAAGCATTATGTATAGAAG+TGG | + | chr3.1:60799816-60799835 | None:intergenic | 30.0% | |
| AGGTTTATTCAGTATTGTGT+TGG | - | chr3.1:60801150-60801169 | MS.gene52362:intron | 30.0% | |
| AGTCGTTACAATTCATGAAA+AGG | + | chr3.1:60800548-60800567 | None:intergenic | 30.0% | |
| AGTTTGACTCTCTTGTATAA+TGG | - | chr3.1:60804447-60804466 | MS.gene52362:intron | 30.0% | |
| ATAAAGTTGAAGGGTCAAAT+GGG | + | chr3.1:60802468-60802487 | None:intergenic | 30.0% | |
| ATGATATTTCCACCTAATAC+TGG | + | chr3.1:60800628-60800647 | None:intergenic | 30.0% | |
| ATGGCTTCTTATGCATATAT+TGG | - | chr3.1:60800005-60800024 | MS.gene52362:intron | 30.0% | |
| ATTAGATTAACCTCTTTCTC+AGG | + | chr3.1:60799924-60799943 | None:intergenic | 30.0% | |
| ATTATCCGCATTTCATAAGT+TGG | - | chr3.1:60802326-60802345 | MS.gene52362:intron | 30.0% | |
| ATTATGGAACTTTCAAGATG+TGG | + | chr3.1:60803492-60803511 | None:intergenic | 30.0% | |
| ATTTCTCACATCATCATGAA+TGG | + | chr3.1:60802411-60802430 | None:intergenic | 30.0% | |
| CAACTGTACTAAACCAATTA+AGG | - | chr3.1:60804178-60804197 | MS.gene52362:intron | 30.0% | |
| CACCAAGTTATTAGACAAAT+GGG | - | chr3.1:60801604-60801623 | MS.gene52362:intron | 30.0% | |
| CATGATACCTCAAATACATA+AGG | + | chr3.1:60802502-60802521 | None:intergenic | 30.0% | |
| CATGGAAATGGAAATTATAG+AGG | + | chr3.1:60801339-60801358 | None:intergenic | 30.0% | |
| CCTATATGTCAAACATGAAA+AGG | - | chr3.1:60801890-60801909 | MS.gene52362:intron | 30.0% | |
| GAAAATATAAGACGGCAATT+TGG | - | chr3.1:60803015-60803034 | MS.gene52362:intron | 30.0% | |
| GAACACTGTATCTATGTAAA+TGG | + | chr3.1:60799704-60799723 | None:intergenic | 30.0% | |
| GAAGCTTATCTTTATGTACT+AGG | + | chr3.1:60802272-60802291 | None:intergenic | 30.0% | |
| GACGCAATGTACTTAAAAAT+GGG | + | chr3.1:60801459-60801478 | None:intergenic | 30.0% | |
| GACTCCAAATATAACTTTGA+CGG | + | chr3.1:60798899-60798918 | None:intergenic | 30.0% | |
| GATACTGATAGAAACTGAAA+AGG | - | chr3.1:60799329-60799348 | MS.gene52362:intron | 30.0% | |
| GATAGAGATAGAGAACATTA+TGG | + | chr3.1:60803508-60803527 | None:intergenic | 30.0% | |
| GGATTTAAATGCATCAGAAA+TGG | - | chr3.1:60802075-60802094 | MS.gene52362:intron | 30.0% | |
| GTTCATAATCCTTTCTCATT+TGG | - | chr3.1:60804225-60804244 | MS.gene52362:intron | 30.0% | |
| GTTGTTAAGAGAATAGCATA+AGG | - | chr3.1:60802755-60802774 | MS.gene52362:CDS | 30.0% | |
| TAAAACAATGTGGTGATTAC+TGG | + | chr3.1:60799582-60799601 | None:intergenic | 30.0% | |
| TATAATTCTTCTCCGGATAA+GGG | + | chr3.1:60803903-60803922 | None:intergenic | 30.0% | |
| TATTACTTACCAAGATTGTG+AGG | - | chr3.1:60801804-60801823 | MS.gene52362:intron | 30.0% | |
| TATTAGTTGTGTGAGATCTA+TGG | + | chr3.1:60804513-60804532 | None:intergenic | 30.0% | |
| TCACCAAGTTATTAGACAAA+TGG | - | chr3.1:60801603-60801622 | MS.gene52362:intron | 30.0% | |
| TGAATAGAAGAACATAGACT+TGG | - | chr3.1:60800375-60800394 | MS.gene52362:intron | 30.0% | |
| TGACGCAATGTACTTAAAAA+TGG | + | chr3.1:60801460-60801479 | None:intergenic | 30.0% | |
| TTATAATTCTTCTCCGGATA+AGG | + | chr3.1:60803904-60803923 | None:intergenic | 30.0% | |
| TTATCCGCATTTCATAAGTT+GGG | - | chr3.1:60802327-60802346 | MS.gene52362:intron | 30.0% | |
| TTCCAAGTATGAATCTAACT+TGG | - | chr3.1:60803585-60803604 | MS.gene52362:CDS | 30.0% | |
| TTGACCGTCAAAGTTATATT+TGG | - | chr3.1:60798892-60798911 | MS.gene52362:intron | 30.0% | |
| TTGTCTTGATTATTGTTTGG+CGG | - | chr3.1:60800351-60800370 | MS.gene52362:intron | 30.0% | |
| ! | ACTGGTTTATGTTTCTTCAT+TGG | - | chr3.1:60799064-60799083 | MS.gene52362:intron | 30.0% |
| ! | AGGAAACTCAAACCTTATTT+AGG | + | chr3.1:60802129-60802148 | None:intergenic | 30.0% |
| ! | ATGTTATGAATTTGTTCAGC+AGG | - | chr3.1:60800750-60800769 | MS.gene52362:intron | 30.0% |
| ! | CCGTCTTATATTTTCACTAT+AGG | + | chr3.1:60803010-60803029 | None:intergenic | 30.0% |
| ! | CCTTTTCATGTTTGACATAT+AGG | + | chr3.1:60801893-60801912 | None:intergenic | 30.0% |
| ! | GCATTTGAAGTTCCTAAATT+AGG | - | chr3.1:60803106-60803125 | MS.gene52362:intron | 30.0% |
| ! | TAAATAAGGTTTGAGTTTCC+TGG | - | chr3.1:60802128-60802147 | MS.gene52362:intron | 30.0% |
| ! | TAATGCTTGTTTGTTGAATC+AGG | - | chr3.1:60799826-60799845 | MS.gene52362:intron | 30.0% |
| ! | TAGAAATTTGCGTACTCTTT+TGG | + | chr3.1:60800787-60800806 | None:intergenic | 30.0% |
| ! | TCAATTTAGTTTCTCATCGT+AGG | - | chr3.1:60801693-60801712 | MS.gene52362:intron | 30.0% |
| ! | TCTTTTGTTCAGTTTTCAAC+AGG | - | chr3.1:60802876-60802895 | MS.gene52362:CDS | 30.0% |
| ! | TGCTGCTTAACAGTATAATT+TGG | - | chr3.1:60799753-60799772 | MS.gene52362:intron | 30.0% |
| !! | ATTAACTTGTCCTTCAACTA+AGG | - | chr3.1:60801724-60801743 | MS.gene52362:intron | 30.0% |
| !! | TTAACTTGTCCTTCAACTAA+GGG | - | chr3.1:60801725-60801744 | MS.gene52362:intron | 30.0% |
| !! | TTTTGAACCCGATGTTTTAA+TGG | - | chr3.1:60800835-60800854 | MS.gene52362:intron | 30.0% |
| !!! | ACTTTCCCTTTTTTTCAGTA+GGG | - | chr3.1:60800042-60800061 | MS.gene52362:intron | 30.0% |
| !!! | ATTTTTAAGTACATTGCGTC+AGG | - | chr3.1:60801459-60801478 | MS.gene52362:intron | 30.0% |
| !!! | CAATTAGTTTTGGTATGTTG+GGG | + | chr3.1:60798776-60798795 | None:intergenic | 30.0% |
| !!! | TACTTTCCCTTTTTTTCAGT+AGG | - | chr3.1:60800041-60800060 | MS.gene52362:intron | 30.0% |
| !!! | TGGTCTTTGTTTTTCATTTG+TGG | - | chr3.1:60799504-60799523 | MS.gene52362:intron | 30.0% |
| !!! | TTATGGGCATCGATATTTTT+TGG | + | chr3.1:60803637-60803656 | None:intergenic | 30.0% |
| AAAAATGTGGGTCAAACTAG+AGG | + | chr3.1:60799971-60799990 | None:intergenic | 35.0% | |
| AAAACTGAGTACCAAATGCA+GGG | + | chr3.1:60799659-60799678 | None:intergenic | 35.0% | |
| AACTTCCTTCTCTACTACAA+CGG | + | chr3.1:60798493-60798512 | None:intergenic | 35.0% | |
| AATATCATCGATGCTAGTTG+TGG | - | chr3.1:60800640-60800659 | MS.gene52362:intron | 35.0% | |
| ACAAGAACCTGTCCTAATTT+AGG | + | chr3.1:60803063-60803082 | None:intergenic | 35.0% | |
| ACCTGTCAGAAAACATATAC+CGG | - | chr3.1:60799140-60799159 | MS.gene52362:intron | 35.0% | |
| AGAATCACAGTTCTTCCAAT+TGG | + | chr3.1:60800075-60800094 | None:intergenic | 35.0% | |
| AGATTCATACTTGGAAGTGA+TGG | + | chr3.1:60803581-60803600 | None:intergenic | 35.0% | |
| ATCACTTCACTTGGAAAAAG+TGG | - | chr3.1:60802356-60802375 | MS.gene52362:intron | 35.0% | |
| ATGTTGATCTGTTAAAAGCG+TGG | - | chr3.1:60802241-60802260 | MS.gene52362:intron | 35.0% | |
| ATTGGAAGAACTGTGATTCT+TGG | - | chr3.1:60800075-60800094 | MS.gene52362:intron | 35.0% | |
| CAACCAACATAAACCAGATT+TGG | + | chr3.1:60803871-60803890 | None:intergenic | 35.0% | |
| CAGTAGGGATATTATCCAAT+TGG | - | chr3.1:60800057-60800076 | MS.gene52362:intron | 35.0% | |
| CATTGATAAAGCAGGATTAG+TGG | + | chr3.1:60798571-60798590 | None:intergenic | 35.0% | |
| CCAACTTACATTGATAAAGC+AGG | + | chr3.1:60798579-60798598 | None:intergenic | 35.0% | |
| CCTGCTTTATCAATGTAAGT+TGG | - | chr3.1:60798576-60798595 | MS.gene52362:intron | 35.0% | |
| GAACAAACATACACGTAGAT+GGG | - | chr3.1:60799011-60799030 | MS.gene52362:intron | 35.0% | |
| GAAGAACATAGACTTGGAAA+TGG | - | chr3.1:60800381-60800400 | MS.gene52362:intron | 35.0% | |
| GAGTCTATGTCATATTTGAC+AGG | - | chr3.1:60803962-60803981 | MS.gene52362:intron | 35.0% | |
| GGTATCATTTCTCTATGAGA+GGG | - | chr3.1:60799857-60799876 | MS.gene52362:intron | 35.0% | |
| GGTTTCCTAAAACCAGTATT+AGG | - | chr3.1:60800613-60800632 | MS.gene52362:intron | 35.0% | |
| GTATCATTTCTCTATGAGAG+GGG | - | chr3.1:60799858-60799877 | MS.gene52362:intron | 35.0% | |
| GTCCAAGTTAGATTCATACT+TGG | + | chr3.1:60803590-60803609 | None:intergenic | 35.0% | |
| GTTTGTAAACAACTGCTACA+TGG | + | chr3.1:60804054-60804073 | None:intergenic | 35.0% | |
| TAAAACTGAGTACCAAATGC+AGG | + | chr3.1:60799660-60799679 | None:intergenic | 35.0% | |
| TAAGAGAATAGCATAAGGCT+TGG | - | chr3.1:60802760-60802779 | MS.gene52362:CDS | 35.0% | |
| TAGTAGAGAAGGAAGTTACT+AGG | - | chr3.1:60798496-60798515 | MS.gene52362:intron | 35.0% | |
| TATATGAGCTAATCCATAGC+TGG | + | chr3.1:60800283-60800302 | None:intergenic | 35.0% | |
| TATCCGCATTTCATAAGTTG+GGG | - | chr3.1:60802328-60802347 | MS.gene52362:intron | 35.0% | |
| TATGTTATAGCTCGTTGACA+TGG | - | chr3.1:60798544-60798563 | MS.gene52362:intron | 35.0% | |
| TCATAGAGAAATGATACCAG+CGG | + | chr3.1:60799855-60799874 | None:intergenic | 35.0% | |
| TCGATGGAACTTGAAACAAA+AGG | + | chr3.1:60800962-60800981 | None:intergenic | 35.0% | |
| TGAGTTAAGGGATAAGAAGT+TGG | + | chr3.1:60803533-60803552 | None:intergenic | 35.0% | |
| TGATGAAGACAGAGTAAGAA+TGG | + | chr3.1:60802659-60802678 | None:intergenic | 35.0% | |
| TGATGCAGAGATACTATTTC+TGG | - | chr3.1:60799098-60799117 | MS.gene52362:intron | 35.0% | |
| TGATGGAAGGTAAATAAAGC+CGG | - | chr3.1:60802830-60802849 | MS.gene52362:CDS | 35.0% | |
| TGCTTCTAGATCTTTCTTTG+TGG | + | chr3.1:60803437-60803456 | None:intergenic | 35.0% | |
| TGGTATCATTTCTCTATGAG+AGG | - | chr3.1:60799856-60799875 | MS.gene52362:intron | 35.0% | |
| TGTACTTAAAAATGGGACAG+CGG | + | chr3.1:60801452-60801471 | None:intergenic | 35.0% | |
| TGTAGTTCCTAAATTAGGAC+AGG | - | chr3.1:60803053-60803072 | MS.gene52362:intron | 35.0% | |
| TGTCATATTTGACAGGAGTT+TGG | - | chr3.1:60803969-60803988 | MS.gene52362:intron | 35.0% | |
| TTCCTAAAACCAGTATTAGG+TGG | - | chr3.1:60800616-60800635 | MS.gene52362:intron | 35.0% | |
| TTTAACCATGGAATCCCAAA+AGG | - | chr3.1:60801130-60801149 | MS.gene52362:intron | 35.0% | |
| TTTAATCATGTCCCTGCATT+TGG | - | chr3.1:60799645-60799664 | MS.gene52362:intron | 35.0% | |
| ! | AACCCTAATTTTCTCCATCT+AGG | + | chr3.1:60803832-60803851 | None:intergenic | 35.0% |
| ! | AGCTCAACTAGTTTGAGTTA+AGG | + | chr3.1:60803546-60803565 | None:intergenic | 35.0% |
| ! | ATGATGATGTGAGAAATGTG+AGG | - | chr3.1:60802414-60802433 | MS.gene52362:intron | 35.0% |
| ! | GCTCAACTAGTTTGAGTTAA+GGG | + | chr3.1:60803545-60803564 | None:intergenic | 35.0% |
| ! | GGAAAGTTACCGTAACATTT+TGG | - | chr3.1:60801238-60801257 | MS.gene52362:intron | 35.0% |
| ! | GGAGTTTGGGAAACAATTTT+AGG | - | chr3.1:60799605-60799624 | MS.gene52362:intron | 35.0% |
| ! | TCTTTAGAAGTGCGTATGAT+AGG | + | chr3.1:60800474-60800493 | None:intergenic | 35.0% |
| ! | TTGTTTAAGTTCTACCAAGC+AGG | - | chr3.1:60804363-60804382 | MS.gene52362:CDS | 35.0% |
| ! | TTTTGCTAGGAACTTCATCT+TGG | - | chr3.1:60800913-60800932 | MS.gene52362:intron | 35.0% |
| !! | CTTTTGTCATGCTTGTTAAC+TGG | - | chr3.1:60799046-60799065 | MS.gene52362:intron | 35.0% |
| !! | GTGTTATTTCCCTTAGTTGA+AGG | + | chr3.1:60801737-60801756 | None:intergenic | 35.0% |
| !!! | ATAAACCTTTTGGGATTCCA+TGG | + | chr3.1:60801138-60801157 | None:intergenic | 35.0% |
| !!! | TGGACTTTTTTCTTTGGTTG+TGG | - | chr3.1:60800696-60800715 | MS.gene52362:intron | 35.0% |
| !!! | TTCCACCTAATACTGGTTTT+AGG | + | chr3.1:60800621-60800640 | None:intergenic | 35.0% |
| AAAAATGGGACAGCGGTAAA+AGG | + | chr3.1:60801445-60801464 | None:intergenic | 40.0% | |
| AAAACCACCCCATACAGAAA+AGG | + | chr3.1:60799895-60799914 | None:intergenic | 40.0% | |
| AAACATCCATGAGCTCTGTT+GGG | + | chr3.1:60800309-60800328 | None:intergenic | 40.0% | |
| AAGTGGTGAGTTTCGACATA+TGG | - | chr3.1:60802373-60802392 | MS.gene52362:intron | 40.0% | |
| AAGTTCACGTTCAGAGAGAA+AGG | + | chr3.1:60802025-60802044 | None:intergenic | 40.0% | |
| ACATAAGAGATGTTCCTGCT+TGG | + | chr3.1:60804380-60804399 | None:intergenic | 40.0% | |
| ACCTGTCTTTCAAGCAACAA+AGG | - | chr3.1:60801840-60801859 | MS.gene52362:intron | 40.0% | |
| ACTACTCAGAGAACATGTTG+AGG | - | chr3.1:60800725-60800744 | MS.gene52362:intron | 40.0% | |
| AGCACGAAACATGTTCTTCA+TGG | + | chr3.1:60801179-60801198 | None:intergenic | 40.0% | |
| AGGAAGTGAGACAAGCTAAA+CGG | + | chr3.1:60801314-60801333 | None:intergenic | 40.0% | |
| ATAACATACAGGACAAGCCA+AGG | + | chr3.1:60798532-60798551 | None:intergenic | 40.0% | |
| ATCCTGGAACAAGCCTTAAT+TGG | + | chr3.1:60804194-60804213 | None:intergenic | 40.0% | |
| ATGCTCCTCTAAACTCTTAC+TGG | + | chr3.1:60800117-60800136 | None:intergenic | 40.0% | |
| ATTAGGACAGGTTCTTGTGA+AGG | - | chr3.1:60803065-60803084 | MS.gene52362:intron | 40.0% | |
| ATTGAAGACCTCCAATGACT+CGG | - | chr3.1:60803277-60803296 | MS.gene52362:intron | 40.0% | |
| CAACTACCTACATACTGGAT+GGG | - | chr3.1:60801419-60801438 | MS.gene52362:intron | 40.0% | |
| CACTATTGAACGTGCAATTG+TGG | - | chr3.1:60803806-60803825 | MS.gene52362:intron | 40.0% | |
| CCACGAATGAGAGACAAAAT+TGG | + | chr3.1:60801759-60801778 | None:intergenic | 40.0% | |
| CCTGTCTTTCAAGCAACAAA+GGG | - | chr3.1:60801841-60801860 | MS.gene52362:intron | 40.0% | |
| CTGCAGTTTGAACAGATGAA+GGG | - | chr3.1:60800592-60800611 | MS.gene52362:intron | 40.0% | |
| GCAATATCAGGTCATGGAAA+TGG | + | chr3.1:60801351-60801370 | None:intergenic | 40.0% | |
| GCAGCAGAAATCATCACAAA+AGG | + | chr3.1:60802102-60802121 | None:intergenic | 40.0% | |
| GGAACAAACATACACGTAGA+TGG | - | chr3.1:60799010-60799029 | MS.gene52362:intron | 40.0% | |
| GGCCCATTTGTCTAATAACT+TGG | + | chr3.1:60801609-60801628 | None:intergenic | 40.0% | |
| GGCCTAGATGGAGAAAATTA+GGG | - | chr3.1:60803827-60803846 | MS.gene52362:intron | 40.0% | |
| GTCAACGAGCTATAACATAC+AGG | + | chr3.1:60798543-60798562 | None:intergenic | 40.0% | |
| TAACAAGTTAAGCCACAACC+TGG | + | chr3.1:60800187-60800206 | None:intergenic | 40.0% | |
| TAACATACAGGACAAGCCAA+GGG | + | chr3.1:60798531-60798550 | None:intergenic | 40.0% | |
| TAGGTCCAGTAAGAGTTTAG+AGG | - | chr3.1:60800109-60800128 | MS.gene52362:intron | 40.0% | |
| TATATGTCACGGACCAAATC+TGG | - | chr3.1:60803855-60803874 | MS.gene52362:intron | 40.0% | |
| TATTCACTTACAGCTGCTGA+TGG | + | chr3.1:60801025-60801044 | None:intergenic | 40.0% | |
| TCAGTTTAGCCTCACAATCT+TGG | + | chr3.1:60801816-60801835 | None:intergenic | 40.0% | |
| TCCAACAAGCATGCCAAATA+TGG | + | chr3.1:60801498-60801517 | None:intergenic | 40.0% | |
| TCGTGAGTTCAAGATGTGTT+TGG | + | chr3.1:60799169-60799188 | None:intergenic | 40.0% | |
| TCTCCCCAACTTATGAAATG+CGG | + | chr3.1:60802334-60802353 | None:intergenic | 40.0% | |
| TCTGCTGCAAAGCCTAAATA+AGG | - | chr3.1:60802114-60802133 | MS.gene52362:intron | 40.0% | |
| TGAGAAAGGATTATGAACGG+TGG | + | chr3.1:60804223-60804242 | None:intergenic | 40.0% | |
| TGGCCTAGATGGAGAAAATT+AGG | - | chr3.1:60803826-60803845 | MS.gene52362:intron | 40.0% | |
| TGTATGTTAGAGACAGCGAA+TGG | + | chr3.1:60802701-60802720 | None:intergenic | 40.0% | |
| TGTTGCAACTACCTACATAC+TGG | - | chr3.1:60801414-60801433 | MS.gene52362:intron | 40.0% | |
| TTCAAGATGTGTTTGGTCAC+CGG | + | chr3.1:60799162-60799181 | None:intergenic | 40.0% | |
| TTTCAGCTACCTGCAATATC+AGG | + | chr3.1:60801363-60801382 | None:intergenic | 40.0% | |
| TTTCCATGACCTGATATTGC+AGG | - | chr3.1:60801351-60801370 | MS.gene52362:intron | 40.0% | |
| ! | AACCAATTAAGGCTTGTTCC+AGG | - | chr3.1:60804189-60804208 | MS.gene52362:intron | 40.0% |
| ! | ACCGGTATATGTTTTCTGAC+AGG | + | chr3.1:60799144-60799163 | None:intergenic | 40.0% |
| ! | AGGCTTTAGCAATGTTCTGA+AGG | + | chr3.1:60802168-60802187 | None:intergenic | 40.0% |
| ! | ATAAGTCGTGTTTTACGACC+TGG | - | chr3.1:60801382-60801401 | MS.gene52362:intron | 40.0% |
| ! | CCAATTTTGTCTCTCATTCG+TGG | - | chr3.1:60801756-60801775 | MS.gene52362:intron | 40.0% |
| ! | CGTCAAACCTTTTCTGTATG+GGG | - | chr3.1:60799885-60799904 | MS.gene52362:intron | 40.0% |
| ! | GCGTCAAACCTTTTCTGTAT+GGG | - | chr3.1:60799884-60799903 | MS.gene52362:intron | 40.0% |
| ! | GGACCAAATCTGGTTTATGT+TGG | - | chr3.1:60803865-60803884 | MS.gene52362:intron | 40.0% |
| ! | GGGGTGTTATAATTCTTCTC+CGG | + | chr3.1:60803910-60803929 | None:intergenic | 40.0% |
| ! | TAAGTTGACTGTCCACATGT+TGG | - | chr3.1:60802937-60802956 | MS.gene52362:intron | 40.0% |
| ! | TCATACTTGGAAGTGATGGA+CGG | + | chr3.1:60803577-60803596 | None:intergenic | 40.0% |
| ! | TTGTGTCCTTTTCCCTTATC+CGG | - | chr3.1:60803888-60803907 | MS.gene52362:intron | 40.0% |
| ! | TTGTTGAGGCATGGGTTATT+TGG | - | chr3.1:60800509-60800528 | MS.gene52362:intron | 40.0% |
| ! | TTTTTCTTTGGTTGTGGCTC+TGG | - | chr3.1:60800702-60800721 | MS.gene52362:intron | 40.0% |
| !! | CTTTAGCAATGTTCTGAAGG+CGG | + | chr3.1:60802165-60802184 | None:intergenic | 40.0% |
| AAAAGGCCCATCCAGTATGT+AGG | + | chr3.1:60801428-60801447 | None:intergenic | 45.0% | |
| AACATCCATGAGCTCTGTTG+GGG | + | chr3.1:60800308-60800327 | None:intergenic | 45.0% | |
| AAGTTGAAGGGTCAAATGGG+AGG | + | chr3.1:60802465-60802484 | None:intergenic | 45.0% | |
| AGCTCTACTTACTCTCACTC+AGG | + | chr3.1:60801529-60801548 | None:intergenic | 45.0% | |
| ATCGATGCTAGTTGTGGAAG+TGG | - | chr3.1:60800646-60800665 | MS.gene52362:intron | 45.0% | |
| ATGGTCTTCGTACCAACATG+TGG | + | chr3.1:60802952-60802971 | None:intergenic | 45.0% | |
| CAAACATACACGTAGATGGG+TGG | - | chr3.1:60799014-60799033 | MS.gene52362:intron | 45.0% | |
| CTACCTGCAATATCAGGTCA+TGG | + | chr3.1:60801357-60801376 | None:intergenic | 45.0% | |
| CTCGTAAGTACATCCAGCTA+TGG | - | chr3.1:60800267-60800286 | MS.gene52362:intron | 45.0% | |
| CTTATTGCTAAGCAGTGACC+AGG | - | chr3.1:60800166-60800185 | MS.gene52362:intron | 45.0% | |
| GAAACATCCATGAGCTCTGT+TGG | + | chr3.1:60800310-60800329 | None:intergenic | 45.0% | |
| GAGACAGCGAATGGAAATGT+CGG | + | chr3.1:60802692-60802711 | None:intergenic | 45.0% | |
| GCAACTACCTACATACTGGA+TGG | - | chr3.1:60801418-60801437 | MS.gene52362:intron | 45.0% | |
| GCCATATTTGGCATGCTTGT+TGG | - | chr3.1:60801494-60801513 | MS.gene52362:intron | 45.0% | |
| GCTGCAGTTTGAACAGATGA+AGG | - | chr3.1:60800591-60800610 | MS.gene52362:intron | 45.0% | |
| GTCACCCCTTCTGTTGAATT+CGG | - | chr3.1:60800569-60800588 | MS.gene52362:intron | 45.0% | |
| TCTTCTCCGGATAAGGGAAA+AGG | + | chr3.1:60803897-60803916 | None:intergenic | 45.0% | |
| TGAACGGTGGAAAATGATCC+TGG | + | chr3.1:60804210-60804229 | None:intergenic | 45.0% | |
| TGAACTTGAAGCTCTCTGCA+AGG | - | chr3.1:60802038-60802057 | MS.gene52362:intron | 45.0% | |
| TGCAGCCGAATTCAACAGAA+GGG | + | chr3.1:60800577-60800596 | None:intergenic | 45.0% | |
| TGGTGTGGGAACAACAAGTT+AGG | - | chr3.1:60804545-60804564 | MS.gene52362:intron | 45.0% | |
| TTAACCTCTTTCTCAGGACC+TGG | + | chr3.1:60799918-60799937 | None:intergenic | 45.0% | |
| TTGAAGACCTCCAATGACTC+GGG | - | chr3.1:60803278-60803297 | MS.gene52362:intron | 45.0% | |
| ! | CAAACCTTTTCTGTATGGGG+TGG | - | chr3.1:60799888-60799907 | MS.gene52362:intron | 45.0% |
| ! | CCCTTTGTTGCTTGAAAGAC+AGG | + | chr3.1:60801844-60801863 | None:intergenic | 45.0% |
| ! | GGCGTCAAACCTTTTCTGTA+TGG | - | chr3.1:60799883-60799902 | MS.gene52362:intron | 45.0% |
| ! | TACACGTAGATGGGTGGATT+TGG | - | chr3.1:60799020-60799039 | MS.gene52362:intron | 45.0% |
| ! | TCATTTTGTCCCCGAGTCAT+TGG | + | chr3.1:60803291-60803310 | None:intergenic | 45.0% |
| ! | TGACTCGGGGACAAAATGAA+AGG | - | chr3.1:60803292-60803311 | MS.gene52362:intron | 45.0% |
| ! | TGCTTGAATGCCAAAGCACT+TGG | - | chr3.1:60803377-60803396 | MS.gene52362:intron | 45.0% |
| ! | TTTTCCAGGTCCTGAGAAAG+AGG | - | chr3.1:60799911-60799930 | MS.gene52362:intron | 45.0% |
| !! | ATACTTGGAAGTGATGGACG+GGG | + | chr3.1:60803575-60803594 | None:intergenic | 45.0% |
| !! | CATACTTGGAAGTGATGGAC+GGG | + | chr3.1:60803576-60803595 | None:intergenic | 45.0% |
| !! | AATAATCATTAATTAATATT+TGG | - | chr3.1:60801041-60801060 | MS.gene52362:intron | 5.0% |
| !! | ATAAAATTAAAGATTAAAAA+GGG | + | chr3.1:60799276-60799295 | None:intergenic | 5.0% |
| AAGCTCTCTGCAAGGCATGT+GGG | - | chr3.1:60802046-60802065 | MS.gene52362:intron | 50.0% | |
| ACGTGCAATTGTGGCCTAGA+TGG | - | chr3.1:60803815-60803834 | MS.gene52362:intron | 50.0% | |
| ATAAGCCCCAACAGAGCTCA+TGG | - | chr3.1:60800300-60800319 | MS.gene52362:intron | 50.0% | |
| CATTTCTCTATGAGAGGGGC+TGG | - | chr3.1:60799862-60799881 | MS.gene52362:intron | 50.0% | |
| CTGAAAAGCTCAGTGGAAGC+TGG | + | chr3.1:60799227-60799246 | None:intergenic | 50.0% | |
| CTGCAGCCGAATTCAACAGA+AGG | + | chr3.1:60800578-60800597 | None:intergenic | 50.0% | |
| GCAGCCGAATTCAACAGAAG+GGG | + | chr3.1:60800576-60800595 | None:intergenic | 50.0% | |
| GGGGAGATCATCACTTCACT+TGG | - | chr3.1:60802347-60802366 | MS.gene52362:intron | 50.0% | |
| TACTAGGAGCAGCAATCCCT+TGG | - | chr3.1:60798512-60798531 | MS.gene52362:intron | 50.0% | |
| TGAAGACCTCCAATGACTCG+GGG | - | chr3.1:60803279-60803298 | MS.gene52362:intron | 50.0% | |
| TGCATGCCTGAAAAGCTCAG+TGG | + | chr3.1:60799234-60799253 | None:intergenic | 50.0% | |
| TTGTTGAATCAGGATGCCGC+TGG | - | chr3.1:60799836-60799855 | MS.gene52362:intron | 50.0% | |
| ! | AGTCGTGTTTTACGACCTGG+CGG | - | chr3.1:60801385-60801404 | MS.gene52362:intron | 50.0% |
| ! | CAGCTTCCACTGAGCTTTTC+AGG | - | chr3.1:60799225-60799244 | MS.gene52362:intron | 50.0% |
| ! | CTTACAGCTGCTGATGGTGA+AGG | + | chr3.1:60801019-60801038 | None:intergenic | 50.0% |
| ! | TCTGTATGGGGTGGTTTTCC+AGG | - | chr3.1:60799897-60799916 | MS.gene52362:intron | 50.0% |
| ! | TTTTGTCCCCGAGTCATTGG+AGG | + | chr3.1:60803288-60803307 | None:intergenic | 50.0% |
| CAGGAGCAGCTCTTCACTGT+TGG | - | chr3.1:60800993-60801012 | MS.gene52362:intron | 55.0% | |
| GAAGCTCTCTGCAAGGCATG+TGG | - | chr3.1:60802045-60802064 | MS.gene52362:intron | 55.0% | |
| GCTAAGCAGTGACCAGGTTG+TGG | - | chr3.1:60800172-60800191 | MS.gene52362:intron | 55.0% | |
| GGGTTCACTGCCAAGTGCTT+TGG | + | chr3.1:60803390-60803409 | None:intergenic | 55.0% | |
| GTTGCAACAAAGACACCGCC+AGG | + | chr3.1:60801403-60801422 | None:intergenic | 55.0% | |
| TCCATCGATGCTGTGCATGC+AGG | - | chr3.1:60800974-60800993 | MS.gene52362:intron | 55.0% | |
| ! | TCCTGCATGCACAGCATCGA+TGG | + | chr3.1:60800978-60800997 | None:intergenic | 55.0% |
| !! | TGGAAGTGATGGACGGGGTT+GGG | + | chr3.1:60803570-60803589 | None:intergenic | 55.0% |
| !! | TTGGAAGTGATGGACGGGGT+TGG | + | chr3.1:60803571-60803590 | None:intergenic | 55.0% |
| TCTCTGCAAGGCATGTGGGC+TGG | - | chr3.1:60802050-60802069 | MS.gene52362:intron | 60.0% | |
| !! | TGCAAGGCATGTGGGCTGGT+CGG | - | chr3.1:60802054-60802073 | MS.gene52362:intron | 60.0% |
| !! | AAGGCGGCACAGAGAGCGCC+AGG | + | chr3.1:60802149-60802168 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 60798486 | 60805015 | 60798486 | ID=MS.gene52362 |
| chr3.1 | mRNA | 60798486 | 60805015 | 60798486 | ID=MS.gene52362.t1;Parent=MS.gene52362 |
| chr3.1 | exon | 60804912 | 60805015 | 60804912 | ID=MS.gene52362.t1.exon1;Parent=MS.gene52362.t1 |
| chr3.1 | CDS | 60804912 | 60805015 | 60804912 | ID=cds.MS.gene52362.t1;Parent=MS.gene52362.t1 |
| chr3.1 | exon | 60804255 | 60804395 | 60804255 | ID=MS.gene52362.t1.exon2;Parent=MS.gene52362.t1 |
| chr3.1 | CDS | 60804255 | 60804395 | 60804255 | ID=cds.MS.gene52362.t1;Parent=MS.gene52362.t1 |
| chr3.1 | exon | 60803569 | 60803653 | 60803569 | ID=MS.gene52362.t1.exon3;Parent=MS.gene52362.t1 |
| chr3.1 | CDS | 60803569 | 60803653 | 60803569 | ID=cds.MS.gene52362.t1;Parent=MS.gene52362.t1 |
| chr3.1 | exon | 60802710 | 60802903 | 60802710 | ID=MS.gene52362.t1.exon4;Parent=MS.gene52362.t1 |
| chr3.1 | CDS | 60802710 | 60802903 | 60802710 | ID=cds.MS.gene52362.t1;Parent=MS.gene52362.t1 |
| chr3.1 | exon | 60802468 | 60802579 | 60802468 | ID=MS.gene52362.t1.exon5;Parent=MS.gene52362.t1 |
| chr3.1 | CDS | 60802468 | 60802579 | 60802468 | ID=cds.MS.gene52362.t1;Parent=MS.gene52362.t1 |
| chr3.1 | exon | 60799255 | 60799290 | 60799255 | ID=MS.gene52362.t1.exon6;Parent=MS.gene52362.t1 |
| chr3.1 | CDS | 60799255 | 60799290 | 60799255 | ID=cds.MS.gene52362.t1;Parent=MS.gene52362.t1 |
| chr3.1 | exon | 60798486 | 60798509 | 60798486 | ID=MS.gene52362.t1.exon7;Parent=MS.gene52362.t1 |
| chr3.1 | CDS | 60798486 | 60798509 | 60798486 | ID=cds.MS.gene52362.t1;Parent=MS.gene52362.t1 |
| Gene Sequence |
| Protein sequence |
