Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049657.t1 | RHN68036.1 | 84.6 | 247 | 35 | 1 | 1 | 244 | 17 | 263 | 3.10E-116 | 427.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049657.t1 | G7J785 | 84.6 | 247 | 35 | 1 | 1 | 244 | 1 | 247 | 2.2e-116 | 427.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene049657 | 0.828041 | 1.12E-54 | -1.69E-46 |
| MS.gene049552 | MS.gene049657 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene049657 | 0.917547 | 4.65E-86 | -1.69E-46 |
| MS.gene049657 | MS.gene050170 | 0.843337 | 1.49E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene050323 | 0.820911 | 5.34E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene050496 | 0.814301 | 1.65E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene050577 | 0.811894 | 5.57E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene050868 | 0.809053 | 2.29E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene050871 | 0.80888 | 2.49E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene052066 | 0.8343 | 3.25E-56 | -1.69E-46 |
| MS.gene049657 | MS.gene052482 | 0.810621 | 1.05E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene052486 | 0.830601 | 2.68E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene053203 | 0.805923 | 1.06E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene053436 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene053633 | 0.826551 | 2.55E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene05589 | 0.805399 | 1.36E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene056504 | 0.838432 | 2.89E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene056510 | 0.812206 | 4.76E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene056878 | 0.852798 | 3.64E-61 | -1.69E-46 |
| MS.gene049657 | MS.gene058157 | 0.807117 | 5.91E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene05837 | 0.802897 | 4.51E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene059837 | 0.824185 | 9.26E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene059865 | 0.808975 | 2.38E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene05995 | 0.814742 | 1.32E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene05996 | 0.841139 | 5.69E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene06000 | 0.808213 | 3.46E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene060187 | -0.830915 | 2.24E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene060339 | 0.843132 | 1.69E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene060595 | -0.837622 | 4.66E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene060778 | 0.818342 | 2.06E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene06077 | 0.826803 | 2.22E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene060982 | 0.825278 | 5.12E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene061360 | 0.821891 | 3.17E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene061862 | 0.823479 | 1.35E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene061886 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene061887 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene062294 | 0.811696 | 6.15E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene062923 | 0.815371 | 9.57E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene062925 | 0.822077 | 2.87E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene063410 | 0.823463 | 1.37E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene06346 | 0.81374 | 2.20E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene064148 | 0.816739 | 4.73E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene064294 | 0.826668 | 2.39E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene064435 | 0.827251 | 1.73E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene064707 | 0.842126 | 3.13E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene064971 | 0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene065360 | 0.825304 | 5.04E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene065502 | 0.811388 | 7.18E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene065540 | 0.803882 | 2.82E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene066003 | 0.81077 | 9.77E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene066030 | 0.805836 | 1.10E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene06750 | 0.800237 | 1.58E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene067713 | 0.827807 | 1.28E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene068138 | 0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene068771 | 0.82309 | 1.67E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene069355 | 0.84428 | 8.33E-59 | -1.69E-46 |
| MS.gene049657 | MS.gene069593 | 0.817278 | 3.58E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene069855 | 0.813129 | 2.99E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene071931 | 0.801882 | 7.30E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene072303 | 0.869215 | 3.66E-66 | -1.69E-46 |
| MS.gene049657 | MS.gene072468 | 0.805252 | 1.46E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene072871 | 0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene072875 | 0.812814 | 3.51E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene073118 | 0.813635 | 2.32E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene07329 | 0.850537 | 1.59E-60 | -1.69E-46 |
| MS.gene049657 | MS.gene073565 | 0.818712 | 1.70E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene073640 | 0.829564 | 4.80E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene073883 | 0.829507 | 4.95E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene074598 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene07636 | 0.997633 | 3.88E-246 | -1.69E-46 |
| MS.gene049657 | MS.gene08254 | 0.822486 | 2.31E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene08550 | 0.807382 | 5.19E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene08588 | 0.833539 | 5.03E-56 | -1.69E-46 |
| MS.gene049657 | MS.gene08766 | 0.808262 | 3.38E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene08964 | 0.827326 | 1.66E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene09022 | -0.841102 | 5.83E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene09053 | 0.837319 | 5.57E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene09193 | 0.81132 | 7.43E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene09795 | 0.82484 | 6.49E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene09797 | 0.834307 | 3.23E-56 | -1.69E-46 |
| MS.gene049657 | MS.gene20594 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene20878 | 0.840504 | 8.36E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene20892 | 0.814636 | 1.39E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene22588 | 0.821176 | 4.64E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene22869 | 0.828848 | 7.16E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene22903 | 0.824139 | 9.49E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene22911 | 0.822454 | 2.35E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene23115 | 0.803248 | 3.82E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene23217 | 0.812793 | 3.55E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene23219 | 0.813592 | 2.37E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene23254 | 0.811196 | 7.90E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene23350 | 0.807246 | 5.55E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene23352 | 0.810243 | 1.27E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene24082 | 0.801599 | 8.35E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene24562 | 0.809958 | 1.46E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene24631 | 0.823726 | 1.19E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene27116 | 0.818654 | 1.75E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene27893 | 0.831458 | 1.65E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene27981 | 0.802589 | 5.22E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene28073 | 0.817122 | 3.88E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene29014 | 0.834853 | 2.36E-56 | -1.69E-46 |
| MS.gene049657 | MS.gene31105 | 0.860525 | 1.94E-63 | -1.69E-46 |
| MS.gene049657 | MS.gene31106 | 0.828469 | 8.84E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene31869 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene32652 | 0.831719 | 1.42E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene32996 | 0.820427 | 6.90E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene33603 | 0.803729 | 3.03E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene34025 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene34171 | 0.839892 | 1.21E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene34383 | 0.809887 | 1.51E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene34554 | 0.826974 | 2.02E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene36419 | -0.800659 | 1.30E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene38328 | 0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene40110 | 0.823968 | 1.04E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene40943 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene41234 | 0.829701 | 4.44E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene42301 | 0.846968 | 1.56E-59 | -1.69E-46 |
| MS.gene049657 | MS.gene42674 | 0.818603 | 1.80E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene42884 | 0.809701 | 1.66E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene44305 | 0.817416 | 3.34E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene44639 | 0.808427 | 3.11E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene45542 | 0.833083 | 6.54E-56 | -1.69E-46 |
| MS.gene049657 | MS.gene45806 | 0.803208 | 3.89E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene47951 | 0.808939 | 2.42E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene47989 | 0.826779 | 2.25E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene48646 | 0.809607 | 1.74E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene48649 | 0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene50709 | 0.819396 | 1.19E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene50712 | 0.820869 | 5.46E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene51603 | 0.819648 | 1.04E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene51840 | 0.810246 | 1.27E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene51887 | 0.809415 | 1.91E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene52362 | 0.806409 | 8.34E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene52976 | 0.806102 | 9.68E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene54068 | 0.835831 | 1.33E-56 | -1.69E-46 |
| MS.gene049657 | MS.gene54413 | 0.844117 | 9.22E-59 | -1.69E-46 |
| MS.gene049657 | MS.gene54415 | 0.841805 | 3.80E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene54718 | 0.827232 | 1.75E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene55657 | 0.898714 | 4.05E-77 | -1.69E-46 |
| MS.gene049657 | MS.gene55731 | 0.80814 | 3.59E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene55803 | 0.830207 | 3.35E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene56598 | 0.820495 | 6.66E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene57140 | 0.837929 | 3.89E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene57239 | 0.81468 | 1.36E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene58021 | 0.844638 | 6.68E-59 | -1.69E-46 |
| MS.gene049657 | MS.gene58416 | 0.817283 | 3.57E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene59475 | 0.806221 | 9.14E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene59603 | 0.803654 | 3.14E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene59657 | 0.804691 | 1.91E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene60360 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene62198 | 0.813266 | 2.79E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene62850 | 0.808874 | 2.50E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene63310 | 0.805667 | 1.20E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene63751 | -0.852539 | 4.32E-61 | -1.69E-46 |
| MS.gene049657 | MS.gene64286 | 0.826064 | 3.33E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene65400 | 0.81033 | 1.22E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene66774 | 0.800233 | 1.59E-48 | -1.69E-46 |
| MS.gene049657 | MS.gene68529 | 0.843326 | 1.50E-58 | -1.69E-46 |
| MS.gene049657 | MS.gene68625 | 0.815312 | 9.86E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene68980 | 0.861651 | 8.83E-64 | -1.69E-46 |
| MS.gene049657 | MS.gene69259 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene69332 | 0.818278 | 2.13E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene69450 | 0.845883 | 3.08E-59 | -1.69E-46 |
| MS.gene049657 | MS.gene69468 | 0.803527 | 3.34E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene70069 | 0.80575 | 1.15E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene70201 | 0.802003 | 6.89E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene70809 | 0.813384 | 2.63E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene71267 | 0.837616 | 4.68E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene71268 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene71420 | 0.813099 | 3.04E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene71651 | 0.83114 | 1.98E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene72004 | 0.802962 | 4.37E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene72106 | 0.803082 | 4.13E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene72108 | 0.803151 | 4.00E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene72720 | 0.804012 | 2.65E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene73493 | 0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene73545 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene73910 | 0.827803 | 1.28E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene74217 | 0.806041 | 9.97E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene74228 | 0.816755 | 4.70E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene76840 | 0.811577 | 6.53E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene78281 | 0.836503 | 9.01E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene78396 | 0.857147 | 1.99E-62 | -1.69E-46 |
| MS.gene049657 | MS.gene80139 | 0.817199 | 3.73E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene80234 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene80239 | 0.827527 | 1.49E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene82707 | 0.816265 | 6.05E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene82917 | 0.849395 | 3.32E-60 | -1.69E-46 |
| MS.gene049657 | MS.gene83251 | 0.804627 | 1.97E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene84011 | 0.80673 | 7.14E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene84043 | 0.812162 | 4.87E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene85136 | 0.801586 | 8.40E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene86071 | 0.828892 | 6.98E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene86083 | 0.819734 | 9.94E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene86293 | 0.830152 | 3.45E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene87054 | 0.80931 | 2.02E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene87473 | 0.827691 | 1.36E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene88820 | 0.802015 | 6.86E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene89722 | 0.810617 | 1.05E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene90269 | 0.82693 | 2.07E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene90796 | 0.808552 | 2.93E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene90885 | 0.80608 | 9.78E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene91533 | 0.813643 | 2.31E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene92042 | 0.820269 | 7.50E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene92147 | 0.803237 | 3.84E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene92618 | 0.832291 | 1.03E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene93265 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene94356 | 0.825776 | 3.90E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene94628 | 0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene95701 | 0.80287 | 4.57E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene96309 | 0.810201 | 1.30E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene97656 | 0.835883 | 1.29E-56 | -1.69E-46 |
| MS.gene049657 | MS.gene97862 | 0.808059 | 3.73E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene98139 | 0.807624 | 4.62E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene98166 | 0.813449 | 2.55E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049657.t1 | MTR_3g064020 | 84.615 | 247 | 35 | 1 | 1 | 244 | 1 | 247 | 3.40e-155 | 431 |
| MS.gene049657.t1 | MTR_5g076250 | 62.500 | 248 | 77 | 6 | 1 | 239 | 1 | 241 | 1.32e-95 | 280 |
| MS.gene049657.t1 | MTR_3g063990 | 54.980 | 251 | 71 | 4 | 9 | 221 | 3 | 249 | 8.25e-84 | 251 |
| MS.gene049657.t1 | MTR_1g057650 | 51.653 | 242 | 103 | 6 | 1 | 236 | 1 | 234 | 1.01e-73 | 225 |
| MS.gene049657.t1 | MTR_7g117750 | 43.983 | 241 | 121 | 5 | 1 | 236 | 1 | 232 | 1.74e-60 | 191 |
| MS.gene049657.t1 | MTR_3g063980 | 56.164 | 73 | 28 | 1 | 167 | 239 | 56 | 124 | 2.01e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049657.t1 | AT3G02700 | 57.917 | 240 | 89 | 6 | 1 | 236 | 1 | 232 | 3.14e-81 | 244 |
| MS.gene049657.t1 | AT5G06370 | 50.826 | 242 | 105 | 6 | 1 | 236 | 1 | 234 | 8.77e-74 | 225 |
| MS.gene049657.t1 | AT5G16360 | 47.101 | 276 | 96 | 8 | 1 | 236 | 1 | 266 | 5.11e-70 | 216 |
| MS.gene049657.t1 | AT4G00905 | 45.714 | 245 | 120 | 5 | 1 | 236 | 1 | 241 | 5.87e-63 | 197 |
| MS.gene049657.t1 | AT5G16330 | 47.325 | 243 | 98 | 8 | 1 | 236 | 9 | 228 | 7.72e-62 | 194 |
| MS.gene049657.t1 | AT1G01225 | 47.391 | 230 | 112 | 3 | 1 | 226 | 1 | 225 | 1.82e-61 | 194 |
Find 56 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTAGATTGCTTTCTTTC+AGG | 0.124117 | 3.2:+71604885 | MS.gene049657:CDS |
| GCTTTATATCTTCTTGAAAA+TGG | 0.152944 | 3.2:+71605023 | MS.gene049657:CDS |
| AAAAGATTGGTTTCTGATAT+TGG | 0.189791 | 3.2:+71605251 | MS.gene049657:CDS |
| ATGTTTCCGATCAGTCTTAT+TGG | 0.247318 | 3.2:-71604475 | None:intergenic |
| CACAGTTATTCTTGAAGATA+TGG | 0.269187 | 3.2:-71605058 | None:intergenic |
| TATCTTCTTGAAAATGGATT+TGG | 0.299009 | 3.2:+71605029 | MS.gene049657:CDS |
| TTTGCAGTTTATTGCAAAAC+AGG | 0.337490 | 3.2:+71605086 | MS.gene049657:CDS |
| TGCATGTGCCTCCTCTAGCT+TGG | 0.338272 | 3.2:-71604959 | None:intergenic |
| CCGCACCGTCACGACATCTT+TGG | 0.342473 | 3.2:-71604833 | None:intergenic |
| GAACTCTACCTCTTTCAATA+TGG | 0.373949 | 3.2:+71604912 | MS.gene049657:CDS |
| AACTTACTGCATTAAAAGAT+TGG | 0.377765 | 3.2:+71605238 | MS.gene049657:CDS |
| ATGGTGATCCATTTCACAAT+TGG | 0.385236 | 3.2:+71604732 | MS.gene049657:CDS |
| CTGGGGATCATATTTACTCT+TGG | 0.413378 | 3.2:+71604505 | MS.gene049657:CDS |
| CTTCCATCCATGGTCAAATC+AGG | 0.416092 | 3.2:-71605326 | None:intergenic |
| GCATGTGCCTCCTCTAGCTT+GGG | 0.419205 | 3.2:-71604958 | None:intergenic |
| CACATGCACCCTAGCTGCTT+CGG | 0.423293 | 3.2:+71604974 | MS.gene049657:CDS |
| ATCCATTTCACAATTGGATC+AGG | 0.464773 | 3.2:+71604738 | MS.gene049657:CDS |
| ATCGGAAACATCTAAAACCT+GGG | 0.479101 | 3.2:+71604487 | MS.gene049657:CDS |
| GGGATCATATTTACTCTTGG+AGG | 0.483005 | 3.2:+71604508 | MS.gene049657:CDS |
| ACAGGAATATATGTTGAAGA+TGG | 0.483154 | 3.2:+71604708 | MS.gene049657:intron |
| GTCCTGATCCAATTGTGAAA+TGG | 0.487607 | 3.2:-71604740 | None:intergenic |
| GGATCAGGACAGCAAGCTGC+TGG | 0.487944 | 3.2:+71604753 | MS.gene049657:CDS |
| CGAAAGAACTTGTAAAGAAA+CGG | 0.498819 | 3.2:-71604794 | None:intergenic |
| TCATATTTACTCTTGGAGGC+AGG | 0.503930 | 3.2:+71604512 | MS.gene049657:CDS |
| ATACCTGATTTGACCATGGA+TGG | 0.505525 | 3.2:+71605323 | MS.gene049657:CDS |
| GCTGGCAGCAGCTGAATAAG+AGG | 0.511661 | 3.2:-71605147 | None:intergenic |
| TGAAAGAAAGCAATCTAAGC+AGG | 0.512899 | 3.2:-71604883 | None:intergenic |
| ACATCTTTGGCATGGAATGT+TGG | 0.518788 | 3.2:-71604820 | None:intergenic |
| TTCAAGAAGATATAAAGCAC+GGG | 0.519285 | 3.2:-71605018 | None:intergenic |
| TGGAGACACCATATTGAAAG+AGG | 0.529495 | 3.2:-71604920 | None:intergenic |
| CAGTTGGATCCGAAGCAGCT+AGG | 0.530992 | 3.2:-71604983 | None:intergenic |
| AGTTGGATCCGAAGCAGCTA+GGG | 0.533238 | 3.2:-71604982 | None:intergenic |
| GTCGTGACGGTGCGGAAACA+AGG | 0.535193 | 3.2:+71604841 | MS.gene049657:CDS |
| AGTCTACTAGCTTCCATCCA+TGG | 0.540139 | 3.2:-71605336 | None:intergenic |
| GATCGGAAACATCTAAAACC+TGG | 0.543021 | 3.2:+71604486 | MS.gene049657:CDS |
| AAGAAACGGTATAAAATCGC+TGG | 0.543391 | 3.2:-71604780 | None:intergenic |
| TTTCAAGAAGATATAAAGCA+CGG | 0.545122 | 3.2:-71605019 | None:intergenic |
| CGGGGAAGGACCTCTTCAGT+TGG | 0.547650 | 3.2:-71604999 | None:intergenic |
| GGTAGGGCTTTGGTTTGCTG+TGG | 0.552956 | 3.2:+71605215 | MS.gene049657:CDS |
| TCAACCTCAAAAGGCTGCAG+TGG | 0.553525 | 3.2:+71605116 | MS.gene049657:CDS |
| TTAGATTGCTTTCTTTCAGG+AGG | 0.554330 | 3.2:+71604888 | MS.gene049657:CDS |
| TGCTTTCCAATAAGACTGAT+CGG | 0.558642 | 3.2:+71604469 | MS.gene049657:CDS |
| TGATGAAGAGTCTACAGTGC+TGG | 0.563974 | 3.2:-71605165 | None:intergenic |
| CAAGAGTAAATATGATCCCC+AGG | 0.568302 | 3.2:-71604504 | None:intergenic |
| CTGTAGACTCTTCATCACTT+CGG | 0.584097 | 3.2:+71605171 | MS.gene049657:CDS |
| CCGTCACGACATCTTTGGCA+TGG | 0.598030 | 3.2:-71604828 | None:intergenic |
| GAAGATATAAAGCACGGGGA+AGG | 0.600493 | 3.2:-71605013 | None:intergenic |
| AATATATGTTGAAGATGGAA+TGG | 0.601381 | 3.2:+71604713 | MS.gene049657:CDS |
| GCTTACCTCTATGCACATCA+TGG | 0.604488 | 3.2:+71604534 | MS.gene049657:CDS |
| GGTGCGGAAACAAGGACTCA+TGG | 0.614117 | 3.2:+71604849 | MS.gene049657:CDS |
| GATGACCATGATGTGCATAG+AGG | 0.641641 | 3.2:-71604539 | None:intergenic |
| TGCTTCGGATCCAACTGAAG+AGG | 0.647462 | 3.2:+71604989 | MS.gene049657:CDS |
| CCAAAGATGTCGTGACGGTG+CGG | 0.654870 | 3.2:+71604833 | MS.gene049657:CDS |
| CCATGCCAAAGATGTCGTGA+CGG | 0.658966 | 3.2:+71604828 | MS.gene049657:CDS |
| TCAAGAAGATATAAAGCACG+GGG | 0.677622 | 3.2:-71605017 | None:intergenic |
| TCGGAAACATCTAAAACCTG+GGG | 0.712111 | 3.2:+71604488 | MS.gene049657:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTGATACATAAGAAAA+TGG | - | chr3.2:71604617-71604636 | None:intergenic | 20.0% |
| ! | AACTTACTGCATTAAAAGAT+TGG | + | chr3.2:71605238-71605257 | MS.gene049657:CDS | 25.0% |
| ! | AATATATGTTGAAGATGGAA+TGG | + | chr3.2:71604713-71604732 | MS.gene049657:CDS | 25.0% |
| ! | GCTTTATATCTTCTTGAAAA+TGG | + | chr3.2:71605023-71605042 | MS.gene049657:CDS | 25.0% |
| ! | TTTCAAGAAGATATAAAGCA+CGG | - | chr3.2:71605022-71605041 | None:intergenic | 25.0% |
| !! | TATCTTCTTGAAAATGGATT+TGG | + | chr3.2:71605029-71605048 | MS.gene049657:CDS | 25.0% |
| !! | TTGTGCAAGAAAGTATAAAT+TGG | - | chr3.2:71604587-71604606 | None:intergenic | 25.0% |
| !!! | AAAAGATTGGTTTCTGATAT+TGG | + | chr3.2:71605251-71605270 | MS.gene049657:CDS | 25.0% |
| !!! | AAATCAGGTATTTTTTCAAC+TGG | - | chr3.2:71605314-71605333 | None:intergenic | 25.0% |
| ACAGGAATATATGTTGAAGA+TGG | + | chr3.2:71604708-71604727 | MS.gene049657:intron | 30.0% | |
| CACAGTTATTCTTGAAGATA+TGG | - | chr3.2:71605061-71605080 | None:intergenic | 30.0% | |
| CGAAAGAACTTGTAAAGAAA+CGG | - | chr3.2:71604797-71604816 | None:intergenic | 30.0% | |
| TCAGTATGATAGTTATGCAT+AGG | - | chr3.2:71604642-71604661 | None:intergenic | 30.0% | |
| TTCAAGAAGATATAAAGCAC+GGG | - | chr3.2:71605021-71605040 | None:intergenic | 30.0% | |
| TTGGGCTAAAAAATGTAGTT+TGG | - | chr3.2:71604943-71604962 | None:intergenic | 30.0% | |
| TTTGCAGTTTATTGCAAAAC+AGG | + | chr3.2:71605086-71605105 | MS.gene049657:CDS | 30.0% | |
| ! | AAAAATACCTGATTTGACCA+TGG | + | chr3.2:71605319-71605338 | MS.gene049657:CDS | 30.0% |
| AAGAAACGGTATAAAATCGC+TGG | - | chr3.2:71604783-71604802 | None:intergenic | 35.0% | |
| ATCCATTTCACAATTGGATC+AGG | + | chr3.2:71604738-71604757 | MS.gene049657:CDS | 35.0% | |
| ATGGTGATCCATTTCACAAT+TGG | + | chr3.2:71604732-71604751 | MS.gene049657:CDS | 35.0% | |
| CGGCATTTCTGTAATATAAC+AGG | + | chr3.2:71604690-71604709 | MS.gene049657:intron | 35.0% | |
| GAACTCTACCTCTTTCAATA+TGG | + | chr3.2:71604912-71604931 | MS.gene049657:CDS | 35.0% | |
| TCAAGAAGATATAAAGCACG+GGG | - | chr3.2:71605020-71605039 | None:intergenic | 35.0% | |
| TCATATTTGTGTCCTGCTAA+CGG | + | chr3.2:71604670-71604689 | MS.gene049657:intron | 35.0% | |
| TGAAAGAAAGCAATCTAAGC+AGG | - | chr3.2:71604886-71604905 | None:intergenic | 35.0% | |
| TGCTTAGATTGCTTTCTTTC+AGG | + | chr3.2:71604885-71604904 | MS.gene049657:CDS | 35.0% | |
| TGCTTTCCAATAAGACTGAT+CGG | + | chr3.2:71604469-71604488 | MS.gene049657:CDS | 35.0% | |
| TTAGATTGCTTTCTTTCAGG+AGG | + | chr3.2:71604888-71604907 | MS.gene049657:CDS | 35.0% | |
| ! | ATCGGAAACATCTAAAACCT+GGG | + | chr3.2:71604487-71604506 | MS.gene049657:CDS | 35.0% |
| ! | ATGTTTCCGATCAGTCTTAT+TGG | - | chr3.2:71604478-71604497 | None:intergenic | 35.0% |
| ! | TTTGTGAACTCCAGTCTTTT+TGG | + | chr3.2:71605194-71605213 | MS.gene049657:CDS | 35.0% |
| !!! | GGTCTTTTTTCAACCTCAAA+AGG | + | chr3.2:71605107-71605126 | MS.gene049657:CDS | 35.0% |
| ACATCTTTGGCATGGAATGT+TGG | - | chr3.2:71604823-71604842 | None:intergenic | 40.0% | |
| ATTACAGAAATGCCGTTAGC+AGG | - | chr3.2:71604685-71604704 | None:intergenic | 40.0% | |
| CAAGAGTAAATATGATCCCC+AGG | - | chr3.2:71604507-71604526 | None:intergenic | 40.0% | |
| CTGGGGATCATATTTACTCT+TGG | + | chr3.2:71604505-71604524 | MS.gene049657:CDS | 40.0% | |
| CTGTAGACTCTTCATCACTT+CGG | + | chr3.2:71605171-71605190 | MS.gene049657:CDS | 40.0% | |
| GGGATCATATTTACTCTTGG+AGG | + | chr3.2:71604508-71604527 | MS.gene049657:CDS | 40.0% | |
| GTCCTGATCCAATTGTGAAA+TGG | - | chr3.2:71604743-71604762 | None:intergenic | 40.0% | |
| TCATATTTACTCTTGGAGGC+AGG | + | chr3.2:71604512-71604531 | MS.gene049657:CDS | 40.0% | |
| TGGAGACACCATATTGAAAG+AGG | - | chr3.2:71604923-71604942 | None:intergenic | 40.0% | |
| ! | ATACCTGATTTGACCATGGA+TGG | + | chr3.2:71605323-71605342 | MS.gene049657:CDS | 40.0% |
| ! | GATCGGAAACATCTAAAACC+TGG | + | chr3.2:71604486-71604505 | MS.gene049657:CDS | 40.0% |
| ! | TCGGAAACATCTAAAACCTG+GGG | + | chr3.2:71604488-71604507 | MS.gene049657:CDS | 40.0% |
| !! | GAACTCCAGTCTTTTTGGTA+GGG | + | chr3.2:71605199-71605218 | MS.gene049657:CDS | 40.0% |
| !! | TGAACTCCAGTCTTTTTGGT+AGG | + | chr3.2:71605198-71605217 | MS.gene049657:CDS | 40.0% |
| !!! | CATTTTTTAGCCCAAGCTAG+AGG | + | chr3.2:71604948-71604967 | MS.gene049657:CDS | 40.0% |
| CAAAGCCCTACCAAAAAGAC+TGG | - | chr3.2:71605207-71605226 | None:intergenic | 45.0% | |
| CTTCCATCCATGGTCAAATC+AGG | - | chr3.2:71605329-71605348 | None:intergenic | 45.0% | |
| GAAGATATAAAGCACGGGGA+AGG | - | chr3.2:71605016-71605035 | None:intergenic | 45.0% | |
| GATGACCATGATGTGCATAG+AGG | - | chr3.2:71604542-71604561 | None:intergenic | 45.0% | |
| GCTTACCTCTATGCACATCA+TGG | + | chr3.2:71604534-71604553 | MS.gene049657:CDS | 45.0% | |
| TGATGAAGAGTCTACAGTGC+TGG | - | chr3.2:71605168-71605187 | None:intergenic | 45.0% | |
| !! | CAGTCTTTTTGGTAGGGCTT+TGG | + | chr3.2:71605205-71605224 | MS.gene049657:CDS | 45.0% |
| !! | TTTTTAGCCCAAGCTAGAGG+AGG | + | chr3.2:71604951-71604970 | MS.gene049657:CDS | 45.0% |
| AGTTGGATCCGAAGCAGCTA+GGG | - | chr3.2:71604985-71605004 | None:intergenic | 50.0% | |
| CCATGCCAAAGATGTCGTGA+CGG | + | chr3.2:71604828-71604847 | MS.gene049657:CDS | 50.0% | |
| TCAACCTCAAAAGGCTGCAG+TGG | + | chr3.2:71605116-71605135 | MS.gene049657:CDS | 50.0% | |
| TGCTTCGGATCCAACTGAAG+AGG | + | chr3.2:71604989-71605008 | MS.gene049657:CDS | 50.0% | |
| ! | TTGACCACTGCAGCCTTTTG+AGG | - | chr3.2:71605123-71605142 | None:intergenic | 50.0% |
| CACATGCACCCTAGCTGCTT+CGG | + | chr3.2:71604974-71604993 | MS.gene049657:CDS | 55.0% | |
| CAGTTGGATCCGAAGCAGCT+AGG | - | chr3.2:71604986-71605005 | None:intergenic | 55.0% | |
| CCAAAGATGTCGTGACGGTG+CGG | + | chr3.2:71604833-71604852 | MS.gene049657:CDS | 55.0% | |
| CCGTCACGACATCTTTGGCA+TGG | - | chr3.2:71604831-71604850 | None:intergenic | 55.0% | |
| GCTGGCAGCAGCTGAATAAG+AGG | - | chr3.2:71605150-71605169 | None:intergenic | 55.0% | |
| GGTGCGGAAACAAGGACTCA+TGG | + | chr3.2:71604849-71604868 | MS.gene049657:CDS | 55.0% | |
| TGCATGTGCCTCCTCTAGCT+TGG | - | chr3.2:71604962-71604981 | None:intergenic | 55.0% | |
| ! | GCATGTGCCTCCTCTAGCTT+GGG | - | chr3.2:71604961-71604980 | None:intergenic | 55.0% |
| !! | GGTAGGGCTTTGGTTTGCTG+TGG | + | chr3.2:71605215-71605234 | MS.gene049657:CDS | 55.0% |
| CCGCACCGTCACGACATCTT+TGG | - | chr3.2:71604836-71604855 | None:intergenic | 60.0% | |
| CGGGGAAGGACCTCTTCAGT+TGG | - | chr3.2:71605002-71605021 | None:intergenic | 60.0% | |
| GGATCAGGACAGCAAGCTGC+TGG | + | chr3.2:71604753-71604772 | MS.gene049657:CDS | 60.0% | |
| GTCGTGACGGTGCGGAAACA+AGG | + | chr3.2:71604841-71604860 | MS.gene049657:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 71604462 | 71605352 | 71604462 | ID=MS.gene049657 |
| chr3.2 | mRNA | 71604462 | 71605352 | 71604462 | ID=MS.gene049657.t1;Parent=MS.gene049657 |
| chr3.2 | exon | 71604462 | 71604555 | 71604462 | ID=MS.gene049657.t1.exon1;Parent=MS.gene049657.t1 |
| chr3.2 | CDS | 71604462 | 71604555 | 71604462 | ID=cds.MS.gene049657.t1;Parent=MS.gene049657.t1 |
| chr3.2 | exon | 71604712 | 71605352 | 71604712 | ID=MS.gene049657.t1.exon2;Parent=MS.gene049657.t1 |
| chr3.2 | CDS | 71604712 | 71605352 | 71604712 | ID=cds.MS.gene049657.t1;Parent=MS.gene049657.t1 |
| Gene Sequence |
| Protein sequence |
