AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54822

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54822.t1 MTR_2g093010 90.610 820 60 2 1 803 1 820 0.0 1399
MS.gene54822.t1 MTR_2g093010 90.598 819 60 2 2 803 1 819 0.0 1396
MS.gene54822.t1 MTR_2g091080 54.064 812 279 10 29 802 3 758 0.0 669
MS.gene54822.t1 MTR_2g091315 63.605 577 187 6 2 573 1 559 0.0 580
MS.gene54822.t1 MTR_2g091315 34.074 405 190 12 296 638 125 514 9.21e-22 100
MS.gene54822.t1 MTR_2g091015 47.661 898 338 16 5 803 5 869 0.0 569
MS.gene54822.t1 MTR_2g091290 46.144 804 301 13 37 803 27 735 0.0 548
MS.gene54822.t1 MTR_2g010420 44.031 779 322 15 50 802 47 737 1.65e-158 480
MS.gene54822.t1 MTR_2g010420 44.231 780 321 15 50 803 47 738 4.94e-157 479
MS.gene54822.t1 MTR_2g091110 48.948 713 269 11 18 660 7 694 7.68e-151 476
MS.gene54822.t1 MTR_2g091110 43.725 757 327 17 132 803 457 1199 6.05e-119 390
MS.gene54822.t1 MTR_2g091110 35.116 430 217 10 102 496 637 1039 4.74e-27 119
MS.gene54822.t1 MTR_2g091260 42.105 874 334 15 2 803 1 774 8.24e-150 462
MS.gene54822.t1 MTR_3g110385 44.168 763 338 12 63 803 34 730 1.19e-148 457
MS.gene54822.t1 MTR_2g091250 43.386 756 231 14 8 640 20 701 1.18e-128 416
MS.gene54822.t1 MTR_2g091250 42.877 716 308 12 189 803 477 1192 2.20e-110 367
MS.gene54822.t1 MTR_2g091010 40.781 743 285 19 2 692 1 640 2.35e-116 370
MS.gene54822.t1 MTR_2g091325 43.740 615 245 14 1 567 1 562 2.56e-108 344
MS.gene54822.t1 MTR_2g091325 41.895 401 178 8 296 649 167 559 2.65e-54 198
MS.gene54822.t1 MTR_2g091370 44.034 595 251 10 2 541 1 568 1.49e-107 350
MS.gene54822.t1 MTR_2g091370 44.294 517 227 9 341 802 226 736 1.18e-103 339
MS.gene54822.t1 MTR_2g090980 70.980 255 43 2 554 803 289 517 8.75e-106 337
MS.gene54822.t1 MTR_2g091280 41.344 774 270 20 5 649 5 723 3.23e-104 338
MS.gene54822.t1 MTR_2g091280 35.586 222 138 2 217 433 505 726 2.77e-12 70.9
MS.gene54822.t1 MTR_2g091030 55.496 373 130 6 467 806 223 592 1.92e-97 316
MS.gene54822.t1 MTR_2g091030 42.691 431 204 8 2 403 1 417 8.32e-63 222
MS.gene54822.t1 MTR_2g091330 39.246 716 242 17 2 643 1 597 3.63e-92 302
MS.gene54822.t1 MTR_2g091330 35.246 244 100 7 423 664 220 407 3.03e-14 77.0
MS.gene54822.t1 MTR_2g091245 53.086 405 162 5 33 436 13 390 1.62e-91 302
MS.gene54822.t1 MTR_2g091245 43.723 462 218 9 376 803 106 559 1.41e-68 240
MS.gene54822.t1 MTR_2g091025 50.000 380 156 5 449 803 146 516 1.10e-90 297
MS.gene54822.t1 MTR_2g091025 38.182 220 111 4 301 495 135 354 1.21e-20 97.4
MS.gene54822.t1 MTR_2g091335 44.981 518 226 10 298 802 133 604 3.13e-87 289
MS.gene54822.t1 MTR_2g091335 39.726 511 229 14 2 495 1 449 9.74e-72 247
MS.gene54822.t1 MTR_5g078510 44.966 447 147 6 449 803 4 443 1.12e-86 286
MS.gene54822.t1 MTR_5g078510 36.330 267 147 4 252 517 17 261 7.49e-20 94.7
MS.gene54822.t1 MTR_5g078510 33.224 304 172 4 199 495 2 281 4.76e-17 85.9
MS.gene54822.t1 MTR_5g078510 32.000 275 157 7 147 400 2 267 3.61e-11 67.0
MS.gene54822.t1 MTR_2g091105 46.789 436 163 8 2 404 1 400 1.79e-86 289
MS.gene54822.t1 MTR_2g091105 49.468 376 146 5 451 802 229 584 7.87e-76 260
MS.gene54822.t1 MTR_2g091005 40.314 573 252 13 2 541 1 516 3.63e-86 286
MS.gene54822.t1 MTR_6g045183 41.007 556 228 12 296 803 162 665 1.97e-84 286
MS.gene54822.t1 MTR_6g045183 43.011 558 187 13 1 506 1 479 4.67e-80 274
MS.gene54822.t1 MTR_2g091285 42.614 528 217 11 298 802 125 589 6.86e-83 277
MS.gene54822.t1 MTR_2g091285 39.780 455 198 11 5 431 5 411 2.20e-59 213
MS.gene54822.t1 MTR_2g104190 43.882 474 193 8 2 427 1 449 1.78e-81 274
MS.gene54822.t1 MTR_2g104190 43.567 342 177 4 475 801 267 607 4.44e-63 224
MS.gene54822.t1 MTR_5g038810 46.742 353 155 4 451 803 164 483 1.75e-76 261
MS.gene54822.t1 MTR_5g038810 41.551 361 151 8 50 402 15 323 7.94e-54 198
MS.gene54822.t1 MTR_5g038810 35.391 243 115 5 244 483 119 322 1.22e-16 84.7
MS.gene54822.t1 MTR_2g091240 48.438 384 157 9 448 808 131 496 4.27e-74 253
MS.gene54822.t1 MTR_2g091240 43.158 285 104 4 220 492 78 316 8.71e-42 162
MS.gene54822.t1 MTR_2g091240 26.801 347 209 8 19 363 7 310 3.52e-15 80.1
MS.gene54822.t1 MTR_7g056313 42.928 403 178 9 4 391 4 369 7.02e-67 227
MS.gene54822.t1 MTR_7g056313 53.763 186 65 3 420 584 184 369 1.67e-31 127
MS.gene54822.t1 MTR_7g056313 42.593 162 91 1 465 624 208 369 1.67e-21 97.8
MS.gene54822.t1 MTR_7g056313 42.929 198 96 4 459 654 171 353 2.30e-21 97.4
MS.gene54822.t1 MTR_2g091090 46.111 360 148 5 451 797 213 539 2.03e-61 220
MS.gene54822.t1 MTR_2g091090 38.636 440 169 7 1 412 1 367 4.79e-59 213
MS.gene54822.t1 MTR_2g091040 38.636 440 169 7 1 412 1 367 3.11e-60 213
MS.gene54822.t1 MTR_2g091040 37.545 277 124 6 451 714 213 453 2.78e-22 102
MS.gene54822.t1 MTR_2g091040 31.667 300 133 8 298 565 124 383 1.10e-16 84.3
MS.gene54822.t1 MTR_2g103620 45.299 351 146 10 465 802 61 378 1.68e-59 207
MS.gene54822.t1 MTR_2g103620 55.462 119 45 2 62 180 21 131 1.99e-19 91.7
MS.gene54822.t1 MTR_5g078500 40.426 376 148 7 2 375 1 302 3.98e-59 204
MS.gene54822.t1 MTR_2g090640 45.822 371 154 7 245 601 101 438 6.55e-59 210
MS.gene54822.t1 MTR_2g090640 43.182 308 134 9 410 678 157 462 1.50e-36 145
MS.gene54822.t1 MTR_2g090640 36.220 381 162 7 142 519 123 425 9.87e-32 131
MS.gene54822.t1 MTR_2g090640 35.168 327 150 8 171 437 100 424 6.90e-26 113
MS.gene54822.t1 MTR_2g090640 40.249 241 122 3 422 641 128 367 2.19e-25 111
MS.gene54822.t1 MTR_2g103640 48.852 305 134 7 475 775 67 353 3.04e-56 197
MS.gene54822.t1 MTR_2g103640 36.122 263 123 11 61 321 10 229 5.64e-15 77.8
MS.gene54822.t1 MTR_2g103640 39.535 172 89 2 273 443 68 225 3.04e-12 69.3
MS.gene54822.t1 MTR_2g091070 70.270 148 36 2 664 803 2 149 3.48e-53 184
MS.gene54822.t1 MTR_8g107320 42.291 227 97 7 566 789 9 204 3.09e-32 125
MS.gene54822.t1 MTR_8g467200 36.076 316 157 8 493 802 26 302 7.56e-32 130
MS.gene54822.t1 MTR_4g084920 54.962 131 44 5 625 742 168 296 5.07e-28 115
MS.gene54822.t1 MTR_4g084920 38.830 188 101 4 131 316 15 190 5.44e-21 95.1
MS.gene54822.t1 MTR_4g046660 31.729 561 285 18 305 803 53 577 6.58e-28 121
MS.gene54822.t1 MTR_8g106540 32.143 280 163 6 526 802 29 284 1.68e-21 96.3
MS.gene54822.t1 MTR_7g056317 68.235 85 26 1 719 803 1 84 1.16e-18 82.8
MS.gene54822.t1 MTR_2g091360 44.056 143 59 3 426 561 41 169 6.14e-17 83.2
MS.gene54822.t1 MTR_2g091360 39.506 162 87 3 433 590 2 156 1.65e-16 82.0
MS.gene54822.t1 MTR_2g064120 50.505 99 44 2 52 149 117 211 1.62e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54822.t1 AT5G27220 27.484 473 276 11 367 806 369 807 4.43e-16 83.6
MS.gene54822.t1 AT5G27220 27.484 473 276 11 367 806 369 807 4.43e-16 83.6
MS.gene54822.t1 AT5G27220 27.484 473 276 11 367 806 369 807 6.47e-16 83.2
MS.gene54822.t1 AT5G27220 27.484 473 276 11 367 806 369 807 6.47e-16 83.2

Find 144 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTCCTTGTGTCAATTTA+TGG 0.080642 2.1:-9379620 MS.gene54822:CDS
CTCCTCGATATCTCGCTTTA+TGG 0.106596 2.1:+9382030 None:intergenic
TGAAAATTCGGTGGCAGTTC+TGG 0.150498 2.1:-9379648 MS.gene54822:CDS
CTTTAGCAACTTCTTCCTTT+TGG 0.223344 2.1:+9381613 None:intergenic
TTTGATTTCTTAACAGAAAT+AGG 0.239890 2.1:+9382235 None:intergenic
CGTTGTTAGATTTAATTAAA+AGG 0.247437 2.1:-9382168 MS.gene54822:CDS
TGCATCAAGCTCTCTCTCTT+TGG 0.269901 2.1:+9381676 None:intergenic
AGATCCATCAAAAGTTGTTT+TGG 0.291459 2.1:-9379852 MS.gene54822:CDS
TTAATATCGACTCCTTCTTT+TGG 0.309523 2.1:+9381141 None:intergenic
TGAATTTGCTTTGGAACTTA+AGG 0.312804 2.1:-9381699 MS.gene54822:CDS
GTTTACCCGGATTTCGAGTT+TGG 0.322265 2.1:-9382317 MS.gene54822:CDS
GCTATCAAACTGCTTCTCTT+TGG 0.322979 2.1:+9380920 None:intergenic
AGAGCTTGAAAATAAGAAAA+AGG 0.324967 2.1:-9381999 MS.gene54822:CDS
TGTAGAGCTGTTTGGAACTC+TGG 0.329670 2.1:-9379528 MS.gene54822:CDS
CAATCAACTGCTACCATTGA+TGG 0.335095 2.1:-9379938 MS.gene54822:CDS
GTTCCTCTTCCTTCCTTTCA+CGG 0.342021 2.1:+9381747 None:intergenic
TAACATACCAGAAGCTTTAT+CGG 0.346500 2.1:+9379499 None:intergenic
CACTGACGCATGTCTGAAAC+GGG 0.348544 2.1:+9379130 None:intergenic
GAAGGAGGTGGAGTTTAAAA+AGG 0.352287 2.1:-9381261 MS.gene54822:CDS
CCTTGTGTCAATTTATGGAT+TGG 0.361905 2.1:-9379615 MS.gene54822:CDS
TTGATGTGAGCTCCTCCATT+TGG 0.367926 2.1:+9380982 None:intergenic
TTGATTCATGCTCCTTCGCT+TGG 0.387670 2.1:+9380856 None:intergenic
AAGTGAAAATACTGAAAATT+CGG 0.388056 2.1:-9379660 MS.gene54822:CDS
GAAAATTCGGTGGCAGTTCT+GGG 0.395040 2.1:-9379647 MS.gene54822:CDS
GAATGTTCGTGCTCAAATAA+AGG 0.401392 2.1:-9381573 MS.gene54822:CDS
GGAGTTTGAAGTGAAGCAAT+TGG 0.401985 2.1:-9380637 MS.gene54822:CDS
AGAATTTCAGTTTCGTCACT+TGG 0.405145 2.1:+9379896 None:intergenic
TTTGACGAGGAAATTAAATC+AGG 0.407950 2.1:-9380513 MS.gene54822:intron
TAAACTCCACCTCCTTCATC+AGG 0.418515 2.1:+9381267 None:intergenic
TTGACTCTAACACATTCAAT+TGG 0.421070 2.1:+9381225 None:intergenic
TTGATTTAAACTCCTTCTCC+TGG 0.429349 2.1:+9381309 None:intergenic
AAGATAGCTGTAGAGCTGTT+TGG 0.433585 2.1:-9379536 MS.gene54822:CDS
GGAAGGGCAGCTCAATTTGA+TGG 0.433892 2.1:-9381891 MS.gene54822:CDS
GTAGAGCTGTTTGGAACTCT+GGG 0.438058 2.1:-9379527 MS.gene54822:CDS
AAAGAAGCAACTTGAAGGTC+AGG 0.440427 2.1:-9381537 MS.gene54822:CDS
AATTTGATGGATGACTTGAT+TGG 0.441045 2.1:-9381878 MS.gene54822:CDS
TGCGGTAATGGTGATGATGA+TGG 0.443280 2.1:-9382403 MS.gene54822:CDS
ACACTGACGCATGTCTGAAA+CGG 0.443506 2.1:+9379129 None:intergenic
TAGATTCCAGCTCCTTCACT+TGG 0.444751 2.1:+9381024 None:intergenic
CGAAGCTCATGAGAAATTGC+AGG 0.452129 2.1:-9381951 MS.gene54822:CDS
TTGATTCAAACTCCTTTACT+TGG 0.452256 2.1:+9381183 None:intergenic
CTTACACGAGGTTTAATATG+TGG 0.453106 2.1:+9379725 None:intergenic
GATTTATCAGTTGATTTGCT+TGG 0.454214 2.1:+9382145 None:intergenic
AGAGAAGCAGTTTGATAGCC+AGG 0.459092 2.1:-9380916 MS.gene54822:CDS
TCAATAAAGAAGCAACTTGA+AGG 0.464485 2.1:-9381542 MS.gene54822:CDS
TCACCATTACCGCAAAACTT+TGG 0.464980 2.1:+9382412 None:intergenic
TCAAGAGAGAAGCAACTTGA+AGG 0.467554 2.1:-9381458 MS.gene54822:CDS
TTGATGTGAGCTCCTCCACT+TGG 0.478027 2.1:+9380772 None:intergenic
TTGGTGTCCGTGTAGAGTCT+CGG 0.479961 2.1:-9379165 MS.gene54822:intron
GCTAAAGCTAACATCAGAAA+AGG 0.480977 2.1:-9381597 MS.gene54822:CDS
TCAATGCAGAATGAATTTGA+TGG 0.481556 2.1:-9380591 MS.gene54822:CDS
GCAATTGAAAGGACAAGTTA+AGG 0.483479 2.1:-9380742 MS.gene54822:CDS
GAAGGAGTTTAAATCAAAAG+AGG 0.484213 2.1:-9381303 MS.gene54822:CDS
GAAGTTTGAAGGCCTGATGA+AGG 0.485635 2.1:-9381279 MS.gene54822:CDS
AGAGAAGCAATGTGATGAAC+GGG 0.485753 2.1:-9381495 MS.gene54822:CDS
CCTTTACTTGGCATACAAGT+TGG 0.488568 2.1:+9381195 None:intergenic
CTTTGTTACCGAGGTTTACC+CGG 0.489728 2.1:-9382330 MS.gene54822:CDS
CATTATTCAAAAGTATAAGA+TGG 0.494090 2.1:-9379813 MS.gene54822:CDS
GCAATTGAAAGGACAGGTTA+AGG 0.494228 2.1:-9380952 MS.gene54822:CDS
TTGAATTTAAAGATCAAGTG+AGG 0.495707 2.1:-9380659 MS.gene54822:CDS
TGATGTTTCTGTTAAGAAGA+GGG 0.496115 2.1:-9382287 MS.gene54822:CDS
AGTCATTGATAATATTGATA+AGG 0.496791 2.1:-9381771 MS.gene54822:CDS
GCAATGAACAAATTAATTAG+TGG 0.497881 2.1:-9381656 MS.gene54822:CDS
TGAAATTCAAGCGAAGGAGC+TGG 0.502421 2.1:-9380820 MS.gene54822:CDS
TCTAAGATGCAGGAACTTGA+AGG 0.507887 2.1:-9381416 MS.gene54822:CDS
CTGCAAACTTCTTCCATCAA+TGG 0.511498 2.1:+9379925 None:intergenic
AAGAGAAGCAATTTGATAGC+CGG 0.511794 2.1:-9380707 MS.gene54822:CDS
GCAAGTCGAAGGACGGGTGA+TGG 0.513847 2.1:-9381363 MS.gene54822:CDS
TCTTCTCTTCTGACTCGAGC+CGG 0.516034 2.1:+9381099 None:intergenic
GAAACATGAAAGTCGGTTGA+AGG 0.517920 2.1:-9381078 MS.gene54822:CDS
GGAATTTGAATGCCAAAAGA+AGG 0.520295 2.1:-9381153 MS.gene54822:CDS
TGGTGTCCGTGTAGAGTCTC+GGG 0.520727 2.1:-9379164 MS.gene54822:intron
GAAGCAATTCGAAAGCCAAA+TGG 0.522174 2.1:-9380997 MS.gene54822:CDS
AGAATTTGAAATTCAAGCGA+AGG 0.522189 2.1:-9380826 MS.gene54822:CDS
TCAAAAGAGGAGAAGTTTGA+AGG 0.522468 2.1:-9381290 MS.gene54822:CDS
AGAGAAGCAATTTGATAGCC+GGG 0.528136 2.1:-9380706 MS.gene54822:CDS
TCAAAAGAAAGAGAGTTTGA+AGG 0.528477 2.1:-9381047 MS.gene54822:CDS
GAATTTCAGTTTCGTCACTT+GGG 0.529088 2.1:+9379897 None:intergenic
CCAACTTGTATGCCAAGTAA+AGG 0.529486 2.1:-9381195 MS.gene54822:CDS
TTGATTCAAACGCTTTCACC+CGG 0.529873 2.1:+9380688 None:intergenic
AGAAATGCAACTTAAAGTCC+AGG 0.531894 2.1:-9381327 MS.gene54822:CDS
CAATGAACAAATTAATTAGT+GGG 0.531973 2.1:-9381655 MS.gene54822:CDS
ATTGTTAGAAAGCTCATTTG+AGG 0.533517 2.1:-9382095 MS.gene54822:CDS
GGAGTTTGAATCTAAGATGC+AGG 0.536802 2.1:-9381426 MS.gene54822:CDS
TCCGTGTAGAGTCTCGGGTA+AGG 0.538620 2.1:-9379159 MS.gene54822:intron
TCAAAACTGTGGCAATTGAA+AGG 0.545936 2.1:-9380753 MS.gene54822:CDS
ACTTCATCTTCATCGAAAGA+AGG 0.546038 2.1:+9379590 None:intergenic
GCGGTAATGGTGATGATGAT+GGG 0.548173 2.1:-9382402 MS.gene54822:CDS
ATTATTCAAAAGTATAAGAT+GGG 0.548310 2.1:-9379812 MS.gene54822:CDS
TCAAAAGAGGACGAATTTGA+AGG 0.549498 2.1:-9380879 MS.gene54822:CDS
CTCGAAATCCGGGTAAACCT+CGG 0.550108 2.1:+9382322 None:intergenic
TTGATTCAAATGCTTTCACC+TGG 0.550817 2.1:+9380898 None:intergenic
TGAATTTGATGGAGAACTGA+AGG 0.552236 2.1:-9380580 MS.gene54822:CDS
GAAAGCATTTGAATCAAAAG+AGG 0.554492 2.1:-9380892 MS.gene54822:CDS
GTGATGTTTCTGTTAAGAAG+AGG 0.556042 2.1:-9382288 MS.gene54822:CDS
TCAAATCTGTGGCAATTGAA+AGG 0.559650 2.1:-9380963 MS.gene54822:CDS
GATAGAACTTAATCAAGTCA+AGG 0.560272 2.1:-9381825 MS.gene54822:CDS
TGATAAGGACCGTGAAAGGA+AGG 0.560715 2.1:-9381756 MS.gene54822:CDS
TTAGAAAGCTCATTTGAGGA+AGG 0.561900 2.1:-9382091 MS.gene54822:CDS
AGAGAAGCAAGTCGAAGGAC+GGG 0.571455 2.1:-9381369 MS.gene54822:CDS
TGAATTTAAAGATCAAGTGA+GGG 0.574384 2.1:-9380658 MS.gene54822:CDS
AAGAGAAGCAATGTGATGAA+CGG 0.574776 2.1:-9381496 MS.gene54822:CDS
GAAAGCGTTTGAATCAAAAG+AGG 0.576259 2.1:-9380682 MS.gene54822:CDS
GTCCATAAAGCGAGATATCG+AGG 0.577796 2.1:-9382032 MS.gene54822:CDS
ATAGAACTTAATCAAGTCAA+GGG 0.578049 2.1:-9381824 MS.gene54822:CDS
TGAAGGCCAAGTGAAGGAGC+TGG 0.581942 2.1:-9381030 MS.gene54822:CDS
ATGAGCTTTCTAACAATGCA+AGG 0.582002 2.1:+9382101 None:intergenic
GGAGTTTGAATCAAAGCAGA+AGG 0.582316 2.1:-9381174 MS.gene54822:CDS
AAGAGAAGCAAGTCGAAGGA+CGG 0.582339 2.1:-9381370 MS.gene54822:CDS
TGAAGGCCTGATGAAGGAGG+TGG 0.584641 2.1:-9381273 MS.gene54822:CDS
GCAACTTGAAGGACACATGA+AGG 0.585195 2.1:-9381447 MS.gene54822:CDS
GGACCGTGAAAGGAAGGAAG+AGG 0.585661 2.1:-9381750 MS.gene54822:CDS
TTTCTTAACAGAAATAGGCA+AGG 0.588441 2.1:+9382240 None:intergenic
CGGGTAAACCTCGGTAACAA+AGG 0.591925 2.1:+9382331 None:intergenic
CGAATTTGAAGGCCAAGCGA+AGG 0.593921 2.1:-9380868 MS.gene54822:CDS
AGAGTTTGAAGGCCAAGTGA+AGG 0.594285 2.1:-9381036 MS.gene54822:CDS
AAGAGAAGAAACATGAAAGT+CGG 0.597099 2.1:-9381085 MS.gene54822:CDS
TCAAAAGAGAAGCAAGTCGA+AGG 0.600747 2.1:-9381374 MS.gene54822:CDS
GCAACTTAAAGTCCAGGAGA+AGG 0.605338 2.1:-9381321 MS.gene54822:CDS
GCAATTGGAAGTGCAACTGA+AGG 0.607717 2.1:-9380622 MS.gene54822:CDS
GCAACTTGAAGGTCAGGTCA+AGG 0.608454 2.1:-9381531 MS.gene54822:CDS
GCAATGTGATGAACGGGTGG+AGG 0.609089 2.1:-9381489 MS.gene54822:CDS
TGAGGAAGGCAATAAGAAGA+CGG 0.615201 2.1:-9382077 MS.gene54822:CDS
TGAAAATACTGAAAATTCGG+TGG 0.615980 2.1:-9379657 MS.gene54822:CDS
ATATTGATAAGGACCGTGAA+AGG 0.619247 2.1:-9381760 MS.gene54822:CDS
TCTGTGGCAATTGAAAGGAC+AGG 0.625484 2.1:-9380958 MS.gene54822:CDS
TATTTCTGTTAAGAAATCAA+AGG 0.625575 2.1:-9382233 MS.gene54822:CDS
GAAATTCTAGATAATCTGCA+AGG 0.625701 2.1:-9379881 MS.gene54822:CDS
AAGGAAGGAAGAGGAACTCA+AGG 0.628919 2.1:-9381741 MS.gene54822:CDS
GAAGCTCATGAGAAATTGCA+GGG 0.629107 2.1:-9381950 MS.gene54822:CDS
GAAGGAGCTTGAGTTAAGAG+AGG 0.633737 2.1:-9380562 MS.gene54822:CDS
TGCAAGGCCTTTCTTCAGCG+AGG 0.638330 2.1:+9382117 None:intergenic
GCAATTCGAAAGCCAAATGG+AGG 0.643602 2.1:-9380994 MS.gene54822:CDS
TAATGGTGATGATGATGGGA+GGG 0.651761 2.1:-9382398 MS.gene54822:CDS
GTTTGAAGGCCTGATGAAGG+AGG 0.656746 2.1:-9381276 MS.gene54822:CDS
CCAATCCATAAATTGACACA+AGG 0.656897 2.1:+9379615 None:intergenic
GAAGCAATGTGATGAACGGG+TGG 0.657837 2.1:-9381492 MS.gene54822:CDS
ATTGCTTCTTCTCTTACACG+AGG 0.664142 2.1:+9379713 None:intergenic
AGGAGCTCACATCAAATCTG+TGG 0.671175 2.1:-9380974 MS.gene54822:CDS
GTAATGGTGATGATGATGGG+AGG 0.675360 2.1:-9382399 MS.gene54822:CDS
TATGAAGCAAAGACTCTACA+CGG 0.676294 2.1:+9379106 None:intergenic
ATTACTAAAATCATTTGACG+AGG 0.688803 2.1:-9380526 MS.gene54822:CDS
AGGAGCTCACATCAAAACTG+TGG 0.719251 2.1:-9380764 MS.gene54822:CDS
ACTGACGCATGTCTGAAACG+GGG 0.773082 2.1:+9379131 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAGTATAATAGC+TGG + chr2.1:9382096-9382115 None:intergenic 15.0%
!! ACACATATATTTAAATGTTT+GGG + chr2.1:9381447-9381466 None:intergenic 15.0%
!! ATTAAAAGATAAAGTTGAAA+TGG + chr2.1:9381093-9381112 None:intergenic 15.0%
!!! ACTTTATCTTTTAATATCTT+AGG - chr2.1:9381098-9381117 MS.gene54822:CDS 15.0%
!!! ATCTTATACTTTTGAATAAT+GGG + chr2.1:9381732-9381751 None:intergenic 15.0%
!!! ATTATTCAAAAGTATAAGAT+GGG - chr2.1:9381732-9381751 MS.gene54822:CDS 15.0%
!!! CTTTTAATTAAATCTAACAA+CGG + chr2.1:9379378-9379397 None:intergenic 15.0%
!! AAAAATTGAAGAATGTGTTA+AGG - chr2.1:9379617-9379636 MS.gene54822:CDS 20.0%
!! AAGTGAAAATACTGAAAATT+CGG - chr2.1:9381884-9381903 MS.gene54822:CDS 20.0%
!! ATGATTAAGATATTATCTGT+TGG - chr2.1:9382205-9382224 MS.gene54822:CDS 20.0%
!! CAATGAACAAATTAATTAGT+GGG - chr2.1:9379889-9379908 MS.gene54822:CDS 20.0%
!! CACACATATATTTAAATGTT+TGG + chr2.1:9381448-9381467 None:intergenic 20.0%
!! CGTTGTTAGATTTAATTAAA+AGG - chr2.1:9379376-9379395 MS.gene54822:intron 20.0%
!!! AGTCATTGATAATATTGATA+AGG - chr2.1:9379773-9379792 MS.gene54822:CDS 20.0%
!!! CATCTTATACTTTTGAATAA+TGG + chr2.1:9381733-9381752 None:intergenic 20.0%
!!! CATTATTCAAAAGTATAAGA+TGG - chr2.1:9381731-9381750 MS.gene54822:CDS 20.0%
!!! TATTTCTGTTAAGAAATCAA+AGG - chr2.1:9379311-9379330 MS.gene54822:intron 20.0%
!!! TTTGATTTCTTAACAGAAAT+AGG + chr2.1:9379312-9379331 None:intergenic 20.0%
! AGAGCTTGAAAATAAGAAAA+AGG - chr2.1:9379545-9379564 MS.gene54822:CDS 25.0%
! ATAGAAACATCAGTAAATCA+AGG + chr2.1:9381535-9381554 None:intergenic 25.0%
! ATAGAACTTAATCAAGTCAA+GGG - chr2.1:9379720-9379739 MS.gene54822:CDS 25.0%
! ATTACTAAAATCATTTGACG+AGG - chr2.1:9381018-9381037 MS.gene54822:CDS 25.0%
! GACAAAAATATTTCAAAAGC+CGG - chr2.1:9380426-9380445 MS.gene54822:intron 25.0%
! GCAATGAACAAATTAATTAG+TGG - chr2.1:9379888-9379907 MS.gene54822:CDS 25.0%
! TGAATTTAAAGATCAAGTGA+GGG - chr2.1:9380886-9380905 MS.gene54822:CDS 25.0%
! TTAAGATATTATCTGTTGGT+AGG - chr2.1:9382209-9382228 MS.gene54822:CDS 25.0%
! TTGAATTTAAAGATCAAGTG+AGG - chr2.1:9380885-9380904 MS.gene54822:CDS 25.0%
!! AAAAATTGCTGAATTTGCTT+TGG - chr2.1:9379836-9379855 MS.gene54822:CDS 25.0%
!! ACTGATGTTTCTATAAACAT+GGG - chr2.1:9381541-9381560 MS.gene54822:CDS 25.0%
!! ATATCCAAAACAACTTTTGA+TGG + chr2.1:9381699-9381718 None:intergenic 25.0%
!! TACTGATGTTTCTATAAACA+TGG - chr2.1:9381540-9381559 MS.gene54822:CDS 25.0%
!! TTCAGTATTTTCACTTATGT+TGG + chr2.1:9381880-9381899 None:intergenic 25.0%
!!! AAGCAAATTCAGCAATTTTT+TGG + chr2.1:9379836-9379855 None:intergenic 25.0%
!!! AAGGAAATTAGTTGTTTTAG+AGG - chr2.1:9379564-9379583 MS.gene54822:CDS 25.0%
!!! AGCAAATTCAGCAATTTTTT+GGG + chr2.1:9379835-9379854 None:intergenic 25.0%
!!! ATGAAGTTTTAAAGCTTTTC+GGG - chr2.1:9381970-9381989 MS.gene54822:CDS 25.0%
!!! GATGAAGTTTTAAAGCTTTT+CGG - chr2.1:9381969-9381988 MS.gene54822:CDS 25.0%
!!! TGAGTTTCAAGGTTTTTTTT+TGG - chr2.1:9381241-9381260 MS.gene54822:CDS 25.0%
AAGAGAAGAAACATGAAAGT+CGG - chr2.1:9380459-9380478 MS.gene54822:intron 30.0%
AAGCTGAACTGATATGTAAT+TGG - chr2.1:9382232-9382251 MS.gene54822:CDS 30.0%
ATATATCATGTAGAGTCTCT+AGG + chr2.1:9382172-9382191 None:intergenic 30.0%
ATTGTTAGAAAGCTCATTTG+AGG - chr2.1:9379449-9379468 MS.gene54822:intron 30.0%
CAGAAAAATTAGAGTCCAAA+AGG - chr2.1:9379916-9379935 MS.gene54822:CDS 30.0%
GAAATTCTAGATAATCTGCA+AGG - chr2.1:9381663-9381682 MS.gene54822:CDS 30.0%
GAAGGAGTTTAAATCAAAAG+AGG - chr2.1:9380241-9380260 MS.gene54822:intron 30.0%
GATAGAACTTAATCAAGTCA+AGG - chr2.1:9379719-9379738 MS.gene54822:CDS 30.0%
TATGATATGACTGAGTTTCA+AGG - chr2.1:9381230-9381249 MS.gene54822:CDS 30.0%
TCAAAAGAAAGAGAGTTTGA+AGG - chr2.1:9380497-9380516 MS.gene54822:intron 30.0%
TCAATAAAGAAGCAACTTGA+AGG - chr2.1:9380002-9380021 MS.gene54822:intron 30.0%
TCAATGCAGAATGAATTTGA+TGG - chr2.1:9380953-9380972 MS.gene54822:CDS 30.0%
TGAAAATACTGAAAATTCGG+TGG - chr2.1:9381887-9381906 MS.gene54822:CDS 30.0%
TTGACTCTAACACATTCAAT+TGG + chr2.1:9380322-9380341 None:intergenic 30.0%
TTGATTCAAACTCCTTTACT+TGG + chr2.1:9380364-9380383 None:intergenic 30.0%
TTTCTTAACAGAAATAGGCA+AGG + chr2.1:9379307-9379326 None:intergenic 30.0%
TTTGACGAGGAAATTAAATC+AGG - chr2.1:9381031-9381050 MS.gene54822:CDS 30.0%
! AATTTGATGGATGACTTGAT+TGG - chr2.1:9379666-9379685 MS.gene54822:CDS 30.0%
! AGAATTTGAAATTCAAGCGA+AGG - chr2.1:9380718-9380737 MS.gene54822:CDS 30.0%
! AGATCCATCAAAAGTTGTTT+TGG - chr2.1:9381692-9381711 MS.gene54822:CDS 30.0%
! ATTTTACCAAACTCGAAATC+CGG + chr2.1:9379236-9379255 None:intergenic 30.0%
! TAACATACCAGAAGCTTTAT+CGG + chr2.1:9382048-9382067 None:intergenic 30.0%
! TCAGTTGATACTAACAGTAA+CGG + chr2.1:9381415-9381434 None:intergenic 30.0%
! TGATGTTTCTGTTAAGAAGA+GGG - chr2.1:9379257-9379276 MS.gene54822:intron 30.0%
! TGTTAAGGATTTTGTAGTGA+AGG - chr2.1:9379632-9379651 MS.gene54822:CDS 30.0%
! TTTGATAAGCCAAAGTTTTG+CGG - chr2.1:9379123-9379142 MS.gene54822:CDS 30.0%
!! GAAAGCATTTGAATCAAAAG+AGG - chr2.1:9380652-9380671 MS.gene54822:CDS 30.0%
!! GATTTATCAGTTGATTTGCT+TGG + chr2.1:9379402-9379421 None:intergenic 30.0%
!! TGAATTTGCTTTGGAACTTA+AGG - chr2.1:9379845-9379864 MS.gene54822:CDS 30.0%
!!! AGGTTTTATTCTTGTCGAAT+CGG - chr2.1:9381118-9381137 MS.gene54822:CDS 30.0%
!!! TTAATATCGACTCCTTCTTT+TGG + chr2.1:9380406-9380425 None:intergenic 30.0%
!!! TTCAAGGTTTTTTTTTGGAG+AGG - chr2.1:9381246-9381265 MS.gene54822:CDS 30.0%
AACAGCAATAGTTGCACTAA+AGG + chr2.1:9381328-9381347 None:intergenic 35.0%
AAGAGAAGCAATGTGATGAA+CGG - chr2.1:9380048-9380067 MS.gene54822:intron 35.0%
ACTTCATCTTCATCGAAAGA+AGG + chr2.1:9381957-9381976 None:intergenic 35.0%
AGAAATGCAACTTAAAGTCC+AGG - chr2.1:9380217-9380236 MS.gene54822:intron 35.0%
AGAATTTCAGTTTCGTCACT+TGG + chr2.1:9381651-9381670 None:intergenic 35.0%
ATATTGATAAGGACCGTGAA+AGG - chr2.1:9379784-9379803 MS.gene54822:CDS 35.0%
ATGAGCTTTCTAACAATGCA+AGG + chr2.1:9379446-9379465 None:intergenic 35.0%
CCAATCCATAAATTGACACA+AGG + chr2.1:9381932-9381951 None:intergenic 35.0%
CCTTGTGTCAATTTATGGAT+TGG - chr2.1:9381929-9381948 MS.gene54822:CDS 35.0%
CTACTCCTTGTGTCAATTTA+TGG - chr2.1:9381924-9381943 MS.gene54822:CDS 35.0%
CTTACACGAGGTTTAATATG+TGG + chr2.1:9381822-9381841 None:intergenic 35.0%
GAATGTTCGTGCTCAAATAA+AGG - chr2.1:9379971-9379990 MS.gene54822:intron 35.0%
GAATTTCAGTTTCGTCACTT+GGG + chr2.1:9381650-9381669 None:intergenic 35.0%
GCAATTGAAAGGACAAGTTA+AGG - chr2.1:9380802-9380821 MS.gene54822:CDS 35.0%
GCTAAAGCTAACATCAGAAA+AGG - chr2.1:9379947-9379966 MS.gene54822:intron 35.0%
GGAATTTGAATGCCAAAAGA+AGG - chr2.1:9380391-9380410 MS.gene54822:intron 35.0%
GGTAAATGATCTTCATCATC+TGG - chr2.1:9381052-9381071 MS.gene54822:CDS 35.0%
TATGAAGCAAAGACTCTACA+CGG + chr2.1:9382441-9382460 None:intergenic 35.0%
TCAAAACTGTGGCAATTGAA+AGG - chr2.1:9380791-9380810 MS.gene54822:CDS 35.0%
TCAAAAGAGGACGAATTTGA+AGG - chr2.1:9380665-9380684 MS.gene54822:CDS 35.0%
TCAAAAGAGGAGAAGTTTGA+AGG - chr2.1:9380254-9380273 MS.gene54822:intron 35.0%
TCAAATCTGTGGCAATTGAA+AGG - chr2.1:9380581-9380600 MS.gene54822:CDS 35.0%
TGAATTTGATGGAGAACTGA+AGG - chr2.1:9380964-9380983 MS.gene54822:CDS 35.0%
TTAGAAAGCTCATTTGAGGA+AGG - chr2.1:9379453-9379472 MS.gene54822:intron 35.0%
TTCAATACCCTGACAAACTA+TGG - chr2.1:9381288-9381307 MS.gene54822:CDS 35.0%
TTGATTCAAATGCTTTCACC+TGG + chr2.1:9380649-9380668 None:intergenic 35.0%
TTGATTTAAACTCCTTCTCC+TGG + chr2.1:9380238-9380257 None:intergenic 35.0%
! AAGAGAAGCAATTTGATAGC+CGG - chr2.1:9380837-9380856 MS.gene54822:CDS 35.0%
! AAGGATTTTGTAGTGAAGGA+AGG - chr2.1:9379636-9379655 MS.gene54822:CDS 35.0%
! AGGATTTTGTAGTGAAGGAA+GGG - chr2.1:9379637-9379656 MS.gene54822:CDS 35.0%
! ATGATTTTCCTTTGTTACCG+AGG - chr2.1:9379205-9379224 MS.gene54822:intron 35.0%
! CTTTAGCAACTTCTTCCTTT+TGG + chr2.1:9379934-9379953 None:intergenic 35.0%
! GTGATGTTTCTGTTAAGAAG+AGG - chr2.1:9379256-9379275 MS.gene54822:intron 35.0%
! TTTTACCAAACTCGAAATCC+GGG + chr2.1:9379235-9379254 None:intergenic 35.0%
!! GAAAGCGTTTGAATCAAAAG+AGG - chr2.1:9380862-9380881 MS.gene54822:CDS 35.0%
!!! AAGGTTTTTTTTTGGAGAGG+AGG - chr2.1:9381249-9381268 MS.gene54822:CDS 35.0%
AAAGAAGCAACTTGAAGGTC+AGG - chr2.1:9380007-9380026 MS.gene54822:intron 40.0%
AACTTCTGGTGATTCAGTTG+CGG - chr2.1:9381372-9381391 MS.gene54822:CDS 40.0%
AAGATAGCTGTAGAGCTGTT+TGG - chr2.1:9382008-9382027 MS.gene54822:CDS 40.0%
AATACCCTGACAAACTATGG+AGG - chr2.1:9381291-9381310 MS.gene54822:CDS 40.0%
AGAGAAGCAATGTGATGAAC+GGG - chr2.1:9380049-9380068 MS.gene54822:intron 40.0%
ATTGCTTCTTCTCTTACACG+AGG + chr2.1:9381834-9381853 None:intergenic 40.0%
CAATCAACTGCTACCATTGA+TGG - chr2.1:9381606-9381625 MS.gene54822:CDS 40.0%
CCAACTTGTATGCCAAGTAA+AGG - chr2.1:9380349-9380368 MS.gene54822:intron 40.0%
CCTTTACTTGGCATACAAGT+TGG + chr2.1:9380352-9380371 None:intergenic 40.0%
CTGCAAACTTCTTCCATCAA+TGG + chr2.1:9381622-9381641 None:intergenic 40.0%
CTTTGTTCTTACGCAACTTC+TGG - chr2.1:9381358-9381377 MS.gene54822:CDS 40.0%
GAAACATGAAAGTCGGTTGA+AGG - chr2.1:9380466-9380485 MS.gene54822:intron 40.0%
GAAGCAATTCGAAAGCCAAA+TGG - chr2.1:9380547-9380566 MS.gene54822:CDS 40.0%
GAAGCTCATGAGAAATTGCA+GGG - chr2.1:9379594-9379613 MS.gene54822:CDS 40.0%
GAAGGAGGTGGAGTTTAAAA+AGG - chr2.1:9380283-9380302 MS.gene54822:intron 40.0%
GCAATTGAAAGGACAGGTTA+AGG - chr2.1:9380592-9380611 MS.gene54822:CDS 40.0%
GCTATCAAACTGCTTCTCTT+TGG + chr2.1:9380627-9380646 None:intergenic 40.0%
GGAGTTTGAATCAAAGCAGA+AGG - chr2.1:9380370-9380389 MS.gene54822:intron 40.0%
TCAAAAGAGAAGCAAGTCGA+AGG - chr2.1:9380170-9380189 MS.gene54822:intron 40.0%
TCAAGAGAGAAGCAACTTGA+AGG - chr2.1:9380086-9380105 MS.gene54822:intron 40.0%
TCACCATTACCGCAAAACTT+TGG + chr2.1:9379135-9379154 None:intergenic 40.0%
TGAGGAAGGCAATAAGAAGA+CGG - chr2.1:9379467-9379486 MS.gene54822:intron 40.0%
TTGATTCAAACGCTTTCACC+CGG + chr2.1:9380859-9380878 None:intergenic 40.0%
! AAATGCCTCCATAGTTTGTC+AGG + chr2.1:9381299-9381318 None:intergenic 40.0%
! AAGCCAAAGTTTTGCGGTAA+TGG - chr2.1:9379129-9379148 MS.gene54822:CDS 40.0%
! AATGCCTCCATAGTTTGTCA+GGG + chr2.1:9381298-9381317 None:intergenic 40.0%
! AGAGAAGCAATTTGATAGCC+GGG - chr2.1:9380838-9380857 MS.gene54822:CDS 40.0%
! GGAGTTTGAAGTGAAGCAAT+TGG - chr2.1:9380907-9380926 MS.gene54822:CDS 40.0%
! GGAGTTTGAATCTAAGATGC+AGG - chr2.1:9380118-9380137 MS.gene54822:intron 40.0%
! TCATTTTCCTCGCTGAAGAA+AGG - chr2.1:9379420-9379439 MS.gene54822:intron 40.0%
! TCTAAGATGCAGGAACTTGA+AGG - chr2.1:9380128-9380147 MS.gene54822:intron 40.0%
!! ATGAAGCACCGACATAGATT+TGG - chr2.1:9382360-9382379 MS.gene54822:CDS 40.0%
!! GAAGCATTTTGAAAGCCAAG+TGG - chr2.1:9380757-9380776 MS.gene54822:CDS 40.0%
!! TAATGGTGATGATGATGGGA+GGG - chr2.1:9379146-9379165 MS.gene54822:CDS 40.0%
AAGAGAAGCAAGTCGAAGGA+CGG - chr2.1:9380174-9380193 MS.gene54822:intron 45.0%
AAGGAAGGAAGAGGAACTCA+AGG - chr2.1:9379803-9379822 MS.gene54822:CDS 45.0%
ACACTGACGCATGTCTGAAA+CGG + chr2.1:9382418-9382437 None:intergenic 45.0%
AGAGTTTGAAGGCCAAGTGA+AGG - chr2.1:9380508-9380527 MS.gene54822:intron 45.0%
AGGAGCTCACATCAAAACTG+TGG - chr2.1:9380780-9380799 MS.gene54822:CDS 45.0%
AGGAGCTCACATCAAATCTG+TGG - chr2.1:9380570-9380589 MS.gene54822:CDS 45.0%
CACGGACACCAAATCTATGT+CGG + chr2.1:9382371-9382390 None:intergenic 45.0%
CGAAGCTCATGAGAAATTGC+AGG - chr2.1:9379593-9379612 MS.gene54822:CDS 45.0%
CTCCTCGATATCTCGCTTTA+TGG + chr2.1:9379517-9379536 None:intergenic 45.0%
CTTTGTTACCGAGGTTTACC+CGG - chr2.1:9379214-9379233 MS.gene54822:intron 45.0%
GAAGGAGCTTGAGTTAAGAG+AGG - chr2.1:9380982-9381001 MS.gene54822:CDS 45.0%
GAAGTTTGAAGGCCTGATGA+AGG - chr2.1:9380265-9380284 MS.gene54822:intron 45.0%
GAGGAGGACTATGAGTTTCA+AGG - chr2.1:9381265-9381284 MS.gene54822:CDS 45.0%
GCAACTTAAAGTCCAGGAGA+AGG - chr2.1:9380223-9380242 MS.gene54822:intron 45.0%
GCAACTTGAAGGACACATGA+AGG - chr2.1:9380097-9380116 MS.gene54822:intron 45.0%
GCAATTCGAAAGCCAAATGG+AGG - chr2.1:9380550-9380569 MS.gene54822:CDS 45.0%
GGCTTCTTACACTTGATGCT+TGG - chr2.1:9382253-9382272 MS.gene54822:CDS 45.0%
GTCCATAAAGCGAGATATCG+AGG - chr2.1:9379512-9379531 MS.gene54822:CDS 45.0%
GTTCCTCTTCCTTCCTTTCA+CGG + chr2.1:9379800-9379819 None:intergenic 45.0%
TAAACTCCACCTCCTTCATC+AGG + chr2.1:9380280-9380299 None:intergenic 45.0%
TAGATTCCAGCTCCTTCACT+TGG + chr2.1:9380523-9380542 None:intergenic 45.0%
TCTGTGGCAATTGAAAGGAC+AGG - chr2.1:9380586-9380605 MS.gene54822:CDS 45.0%
TGAAATTCAAGCGAAGGAGC+TGG - chr2.1:9380724-9380743 MS.gene54822:CDS 45.0%
TGATAAGGACCGTGAAAGGA+AGG - chr2.1:9379788-9379807 MS.gene54822:CDS 45.0%
TGCATCAAGCTCTCTCTCTT+TGG + chr2.1:9379871-9379890 None:intergenic 45.0%
TTGATGTGAGCTCCTCCATT+TGG + chr2.1:9380565-9380584 None:intergenic 45.0%
TTGATTCATGCTCCTTCGCT+TGG + chr2.1:9380691-9380710 None:intergenic 45.0%
! AGAGAAGCAGTTTGATAGCC+AGG - chr2.1:9380628-9380647 MS.gene54822:CDS 45.0%
! GAAAATTCGGTGGCAGTTCT+GGG - chr2.1:9381897-9381916 MS.gene54822:CDS 45.0%
! GCAATTGGAAGTGCAACTGA+AGG - chr2.1:9380922-9380941 MS.gene54822:CDS 45.0%
! GCGGTAATGGTGATGATGAT+GGG - chr2.1:9379142-9379161 MS.gene54822:CDS 45.0%
! GGTTTTGCCGATAAAGCTTC+TGG - chr2.1:9382038-9382057 MS.gene54822:CDS 45.0%
! GTAGAGCTGTTTGGAACTCT+GGG - chr2.1:9382017-9382036 MS.gene54822:CDS 45.0%
! TGAAAATTCGGTGGCAGTTC+TGG - chr2.1:9381896-9381915 MS.gene54822:CDS 45.0%
! TGCGGTAATGGTGATGATGA+TGG - chr2.1:9379141-9379160 MS.gene54822:CDS 45.0%
! TGTAGAGCTGTTTGGAACTC+TGG - chr2.1:9382016-9382035 MS.gene54822:CDS 45.0%
!! GCATTTTGAAAGCCAAGTGG+AGG - chr2.1:9380760-9380779 MS.gene54822:CDS 45.0%
!! GTAATGGTGATGATGATGGG+AGG - chr2.1:9379145-9379164 MS.gene54822:CDS 45.0%
!! GTTTACCCGGATTTCGAGTT+TGG - chr2.1:9379227-9379246 MS.gene54822:intron 45.0%
AGAGAAGCAAGTCGAAGGAC+GGG - chr2.1:9380175-9380194 MS.gene54822:intron 50.0%
CGAATTTGAAGGCCAAGCGA+AGG - chr2.1:9380676-9380695 MS.gene54822:CDS 50.0%
CGGGTAAACCTCGGTAACAA+AGG + chr2.1:9379216-9379235 None:intergenic 50.0%
CTCGAAATCCGGGTAAACCT+CGG + chr2.1:9379225-9379244 None:intergenic 50.0%
GAAGCAATGTGATGAACGGG+TGG - chr2.1:9380052-9380071 MS.gene54822:intron 50.0%
GCAACTTGAAGGTCAGGTCA+AGG - chr2.1:9380013-9380032 MS.gene54822:intron 50.0%
GGAAGGGCAGCTCAATTTGA+TGG - chr2.1:9379653-9379672 MS.gene54822:CDS 50.0%
GTTTGAAGGCCTGATGAAGG+AGG - chr2.1:9380268-9380287 MS.gene54822:intron 50.0%
TTGATGTGAGCTCCTCCACT+TGG + chr2.1:9380775-9380794 None:intergenic 50.0%
! ACTGACGCATGTCTGAAACG+GGG + chr2.1:9382416-9382435 None:intergenic 50.0%
! CACTGACGCATGTCTGAAAC+GGG + chr2.1:9382417-9382436 None:intergenic 50.0%
! TCTTCTCTTCTGACTCGAGC+CGG + chr2.1:9380448-9380467 None:intergenic 50.0%
! TTGGTGTCCGTGTAGAGTCT+CGG - chr2.1:9382379-9382398 MS.gene54822:CDS 50.0%
GCAATGTGATGAACGGGTGG+AGG - chr2.1:9380055-9380074 MS.gene54822:intron 55.0%
GCCTTACCCGAGACTCTACA+CGG + chr2.1:9382389-9382408 None:intergenic 55.0%
GGACCGTGAAAGGAAGGAAG+AGG - chr2.1:9379794-9379813 MS.gene54822:CDS 55.0%
TCCGTGTAGAGTCTCGGGTA+AGG - chr2.1:9382385-9382404 MS.gene54822:CDS 55.0%
TGAAGGCCAAGTGAAGGAGC+TGG - chr2.1:9380514-9380533 MS.gene54822:CDS 55.0%
TGAAGGCCTGATGAAGGAGG+TGG - chr2.1:9380271-9380290 MS.gene54822:intron 55.0%
TGCAAGGCCTTTCTTCAGCG+AGG + chr2.1:9379430-9379449 None:intergenic 55.0%
TGGTGTCCGTGTAGAGTCTC+GGG - chr2.1:9382380-9382399 MS.gene54822:CDS 55.0%
!!! GCTTTTCGGGTTTGCTGCTC+AGG - chr2.1:9381983-9382002 MS.gene54822:CDS 55.0%
GCAAGTCGAAGGACGGGTGA+TGG - chr2.1:9380181-9380200 MS.gene54822:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 9379105 9382461 9379105 ID=MS.gene54822
chr2.1 mRNA 9379105 9382461 9379105 ID=MS.gene54822.t1;Parent=MS.gene54822
chr2.1 exon 9380514 9382461 9380514 ID=MS.gene54822.t1.exon1;Parent=MS.gene54822.t1
chr2.1 CDS 9380514 9382461 9380514 ID=cds.MS.gene54822.t1;Parent=MS.gene54822.t1
chr2.1 exon 9379507 9379965 9379507 ID=MS.gene54822.t1.exon2;Parent=MS.gene54822.t1
chr2.1 CDS 9379507 9379965 9379507 ID=cds.MS.gene54822.t1;Parent=MS.gene54822.t1
chr2.1 exon 9379105 9379172 9379105 ID=MS.gene54822.t1.exon3;Parent=MS.gene54822.t1
chr2.1 CDS 9379105 9379172 9379105 ID=cds.MS.gene54822.t1;Parent=MS.gene54822.t1
Gene Sequence

>MS.gene54822

ATGATGAATTTTGAGGCTTTTGATAAGCCAAAGTTTTGCGGTAATGGTGATGATGATGGGAGGGATCATGTTTCTTGTGAATACTTTGAATCTGAAGATGATGATTTTCCTTTGTTACCGAGGTTTACCCGGATTTCGAGTTTGGTAAAATGTGATGTTTCTGTTAAGAAGAGGGATTTTGAGTTTGATGACAACAATTCCTTGCCTATTTCTGTTAAGAAATCAAAGGCATCACTATATCATGATCACGACAAAGATGAAGATGATATTCCGTTGTTAGATTTAATTAAAAGGCCAAGCAAATCAACTGATAAATCATTTTCCTCGCTGAAGAAAGGCCTTGCATTGTTAGAAAGCTCATTTGAGGAAGGCAATAAGAAGACGGAATTAGAAGAGAATAGATTGCAGTCCATAAAGCGAGATATCGAGGAGTGTCGCAAAGAGCTTGAAAATAAGAAAAAGGAAATTAGTTGTTTTAGAGGAATTGACGAAGCTCATGAGAAATTGCAGGGAAAAATTGAAGAATGTGTTAAGGATTTTGTAGTGAAGGAAGGGCAGCTCAATTTGATGGATGACTTGATTGGAGAGCGCAAGCGAGAGCTCAAGACAAAAGAGATAGAACTTAATCAAGTCAAGGGCAACATTTCAAAAGAAATAGAACTTCGTCAAGTCATTGATAATATTGATAAGGACCGTGAAAGGAAGGAAGAGGAACTCAAGGCTCTTTCCCAAAAAATTGCTGAATTTGCTTTGGAACTTAAGGCCAAAGAGAGAGAGCTTGATGCAATGAACAAATTAATTAGTGGGCAAGCAGAAAAATTAGAGTCCAAAAGGAAGAAGTTGCTAAAGCTAACATCAGAAAAGGAGAATGTTCGTGCTCAAATAAAGGAATTTGAGTCAATAAAGAAGCAACTTGAAGGTCAGGTCAAGGAACTTGAGTCAAAAGAGAAGCAATGTGATGAACGGGTGGAGGTGTTGATATCAAGAGAGAAGCAACTTGAAGGACACATGAAGGAGTTTGAATCTAAGATGCAGGAACTTGAAGGTCGTACGATGCAGCTTGAATCAAAAGAGAAGCAAGTCGAAGGACGGGTGATGGAGCTAAAGTTAAAAGAAATGCAACTTAAAGTCCAGGAGAAGGAGTTTAAATCAAAAGAGGAGAAGTTTGAAGGCCTGATGAAGGAGGTGGAGTTTAAAAAGGAGCACTTTGAAAACCAATTGAATGTGTTAGAGTCAATAGATAACCAACTTGTATGCCAAGTAAAGGAGTTTGAATCAAAGCAGAAGGAATTTGAATGCCAAAAGAAGGAGTCGATATTAAGACAAAAATATTTCAAAAGCCGGCTCGAGTCAGAAGAGAAGAAACATGAAAGTCGGTTGAAGGAGCATGAATCAAAAGAAAGAGAGTTTGAAGGCCAAGTGAAGGAGCTGGAATCTAAAAAGAAGCAATTCGAAAGCCAAATGGAGGAGCTCACATCAAATCTGTGGCAATTGAAAGGACAGGTTAAGGAACTTGAGTCCAAAGAGAAGCAGTTTGATAGCCAGGTGAAAGCATTTGAATCAAAAGAGGACGAATTTGAAGGCCAAGCGAAGGAGCATGAATCAAAAGAGAGAGAATTTGAAATTCAAGCGAAGGAGCTGGAATCTAAAAAGAAGCATTTTGAAAGCCAAGTGGAGGAGCTCACATCAAAACTGTGGCAATTGAAAGGACAAGTTAAGGAACTTGAGTACAAAGAGAAGCAATTTGATAGCCGGGTGAAAGCGTTTGAATCAAAAGAGGTTGAATTTAAAGATCAAGTGAGGGAGTTTGAAGTGAAGCAATTGGAAGTGCAACTGAAGGAGCTAAAGTCAATGCAGAATGAATTTGATGGAGAACTGAAGGAGCTTGAGTTAAGAGAGGATCAATATGAAGCATTACTAAAATCATTTGACGAGGAAATTAAATCAGGTAAATGATCTTCATCATCTGGTTTATTAAGACAATTCCATTTCAACTTTATCTTTTAATATCTTAGGTTTTATTCTTGTCGAATCGGTTTGTTTATAATACTATACAACATAAGATTGATTAGTAGATTAATGTAGTTTAAACTTTCAATTATATTTTAAACACTGTTAATAAGCATATGATATGACTGAGTTTCAAGGTTTTTTTTTGGAGAGGAGGACTATGAGTTTCAAGGTTCAATACCCTGACAAACTATGGAGGCATTTAATAGTCCTTTAGTGCAACTATTGCTGTTATTGTCTATTCTTTGTTCTTACGCAACTTCTGGTGATTCAGTTGCGGTGCTACGATGATATTGACCGTTACTGTTAGTATCAACTGATTTCTGTTACCCAAACATTTAAATATATGTGTGTGTGTGTGTGTGTGTGTCTATATACATTATTATTATTTTTTCTTTTTTTTTCTTTCTATAGTCACCTTGATTTACTGATGTTTCTATAAACATGGGAACTTAAAATCTAAATATGCAGTTACATGTTACACAGATGATCAATCAACTGCTACCATTGATGGAAGAAGTTTGCAGTTGCTCCCAAGTGACGAAACTGAAATTCTAGATAATCTGCAAGGATTATCAGATCCATCAAAAGTTGTTTTGGATATAATACAGAATCCCATTATTCAAAAGTATAAGATGGGAGACAATGCTGTAATTATTGATGATAGAGACATTCTTCTGCTCAAACAACTGATGAGAATCAAACCACATATTAAACCTCGTGTAAGAGAAGAAGCAATGAAGCTAGCACTTAATTTGAAATCCAACATAAGTGAAAATACTGAAAATTCGGTGGCAGTTCTGGGTTTTCTACTCCTTGTGTCAATTTATGGATTGGCTCCTTCTTTCGATGAAGATGAAGTTTTAAAGCTTTTCGGGTTTGCTGCTCAGGACAAGATAGCTGTAGAGCTGTTTGGAACTCTGGGTTTTGCCGATAAAGCTTCTGGTATGTTAGTTTAGAAATGTTTTGTTTCAGATACCAGCTATTATACTTATTTTTTTCTCACTTTGAATTTCAAGTGCAAGTTACATGTGTTCATCAAACATGTAAATATCCTAGAGACTCTACATGATATATAATACAAATTACTATGATTAAGATATTATCTGTTGGTAGGAAGCTGAACTGATATGTAATTGGCTTCTTACACTTGATGCTTGGAAAATGAAATCGACTTCAATTAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTATCTATGAAGCACCGACATAGATTTGGTGTCCGTGTAGAGTCTCGGGTAAGGCGTGTCCCCGTTTCAGACATGCGTCAGTGTCCGTGTAGAGTCTTTGCTTCATAG
Protein sequence

>MS.gene54822.t1

MMNFEAFDKPKFCGNGDDDGRDHVSCEYFESEDDDFPLLPRFTRISSLVKCDVSVKKRDFEFDDNNSLPISVKKSKASLYHDHDKDEDDIPLLDLIKRPSKSTDKSFSSLKKGLALLESSFEEGNKKTELEENRLQSIKRDIEECRKELENKKKEISCFRGIDEAHEKLQGKIEECVKDFVVKEGQLNLMDDLIGERKRELKTKEIELNQVKGNISKEIELRQVIDNIDKDRERKEEELKALSQKIAEFALELKAKERELDAMNKLISGQAEKLESKRKKLLKLTSEKENVRAQIKEFESIKKQLEGQVKELESKEKQCDERVEVLISREKQLEGHMKEFESKMQELEGRTMQLESKEKQVEGRVMELKLKEMQLKVQEKEFKSKEEKFEGLMKEVEFKKEHFENQLNVLESIDNQLVCQVKEFESKQKEFECQKKESILRQKYFKSRLESEEKKHESRLKEHESKEREFEGQVKELESKKKQFESQMEELTSNLWQLKGQVKELESKEKQFDSQVKAFESKEDEFEGQAKEHESKEREFEIQAKELESKKKHFESQVEELTSKLWQLKGQVKELEYKEKQFDSRVKAFESKEVEFKDQVREFEVKQLEVQLKELKSMQNEFDGELKELELREDQYEALLKSFDEEIKSDDQSTATIDGRSLQLLPSDETEILDNLQGLSDPSKVVLDIIQNPIIQKYKMGDNAVIIDDRDILLLKQLMRIKPHIKPRVREEAMKLALNLKSNISENTENSVAVLGFLLLVSIYGLAPSFDEDEVLKLFGFAAQDKIAVELFGTLGFADKASESRVRRVPVSDMRQCPCRVFAS