Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55698.t1 | XP_024627888.1 | 98.4 | 382 | 6 | 0 | 1 | 382 | 69 | 450 | 6.50E-214 | 753.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55698.t1 | Q08448 | 27.0 | 237 | 133 | 8 | 22 | 251 | 6 | 209 | 5.3e-15 | 83.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55698.t1 | G7LIR3 | 98.2 | 383 | 6 | 1 | 1 | 382 | 69 | 451 | 1.2e-212 | 748.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene55698 | -0.834603 | 2.72E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene55698 | 0.846185 | 2.55E-59 | -1.69E-46 |
| MS.gene052823 | MS.gene55698 | 0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene55698 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene053097 | MS.gene55698 | -0.844059 | 9.56E-59 | -1.69E-46 |
| MS.gene054343 | MS.gene55698 | 0.831316 | 1.79E-55 | -1.69E-46 |
| MS.gene054344 | MS.gene55698 | 0.805751 | 1.15E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene55698 | 0.819774 | 9.73E-53 | -1.69E-46 |
| MS.gene055719 | MS.gene55698 | -0.830715 | 2.51E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene55698 | 0.824656 | 7.17E-54 | -1.69E-46 |
| MS.gene056266 | MS.gene55698 | 0.853966 | 1.68E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene55698 | 0.800243 | 1.58E-48 | -1.69E-46 |
| MS.gene059303 | MS.gene55698 | 0.814723 | 1.33E-51 | -1.69E-46 |
| MS.gene059480 | MS.gene55698 | -0.806196 | 9.25E-50 | -1.69E-46 |
| MS.gene059837 | MS.gene55698 | 0.831376 | 1.73E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene55698 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene55698 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene06027 | MS.gene55698 | 0.839589 | 1.45E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55698.t1 | MTR_8g086260 | 98.172 | 383 | 6 | 1 | 1 | 382 | 69 | 451 | 0.0 | 779 |
| MS.gene55698.t1 | MTR_8g086260 | 98.000 | 350 | 6 | 1 | 1 | 349 | 69 | 418 | 0.0 | 712 |
| MS.gene55698.t1 | MTR_8g086260 | 96.562 | 320 | 10 | 1 | 1 | 319 | 69 | 388 | 0.0 | 638 |
| MS.gene55698.t1 | MTR_2g015960 | 78.272 | 382 | 78 | 3 | 1 | 381 | 62 | 439 | 0.0 | 598 |
| MS.gene55698.t1 | MTR_8g086260 | 97.683 | 259 | 6 | 0 | 1 | 259 | 69 | 327 | 0.0 | 521 |
| MS.gene55698.t1 | MTR_8g086260 | 96.311 | 244 | 9 | 0 | 1 | 244 | 69 | 312 | 1.65e-172 | 484 |
| MS.gene55698.t1 | MTR_8g086260 | 96.311 | 244 | 9 | 0 | 1 | 244 | 69 | 312 | 9.22e-172 | 482 |
| MS.gene55698.t1 | MTR_2g015960 | 77.481 | 262 | 57 | 2 | 1 | 261 | 1 | 261 | 7.02e-145 | 412 |
| MS.gene55698.t1 | MTR_2g015960 | 77.481 | 262 | 57 | 2 | 1 | 261 | 62 | 322 | 3.25e-144 | 412 |
| MS.gene55698.t1 | MTR_4g128800 | 44.290 | 359 | 170 | 6 | 20 | 369 | 29 | 366 | 1.08e-94 | 288 |
| MS.gene55698.t1 | MTR_3g110530 | 43.258 | 356 | 187 | 5 | 17 | 370 | 56 | 398 | 1.70e-94 | 288 |
| MS.gene55698.t1 | MTR_1g040460 | 42.939 | 347 | 172 | 4 | 21 | 367 | 30 | 350 | 1.63e-90 | 276 |
| MS.gene55698.t1 | MTR_4g128800 | 44.706 | 340 | 158 | 6 | 20 | 350 | 29 | 347 | 4.77e-88 | 272 |
| MS.gene55698.t1 | MTR_4g128800 | 50.202 | 247 | 113 | 2 | 20 | 259 | 29 | 272 | 7.50e-80 | 246 |
| MS.gene55698.t1 | MTR_7g405800 | 51.765 | 85 | 40 | 1 | 89 | 172 | 143 | 227 | 2.72e-18 | 83.6 |
| MS.gene55698.t1 | MTR_6g005650 | 51.765 | 85 | 40 | 1 | 89 | 172 | 210 | 294 | 1.30e-17 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55698.t1 | AT1G29120 | 72.656 | 384 | 96 | 3 | 1 | 382 | 80 | 456 | 0.0 | 545 |
| MS.gene55698.t1 | AT1G29120 | 72.656 | 384 | 96 | 3 | 1 | 382 | 79 | 455 | 0.0 | 544 |
| MS.gene55698.t1 | AT1G29120 | 72.656 | 384 | 96 | 3 | 1 | 382 | 79 | 455 | 0.0 | 544 |
| MS.gene55698.t1 | AT1G29120 | 72.208 | 385 | 97 | 4 | 1 | 382 | 79 | 456 | 0.0 | 536 |
| MS.gene55698.t1 | AT1G29120 | 72.829 | 357 | 88 | 3 | 1 | 355 | 79 | 428 | 2.09e-178 | 503 |
| MS.gene55698.t1 | AT1G29120 | 72.871 | 317 | 77 | 3 | 1 | 315 | 79 | 388 | 1.26e-152 | 436 |
| MS.gene55698.t1 | AT1G29120 | 72.871 | 317 | 77 | 3 | 1 | 315 | 79 | 388 | 2.53e-152 | 436 |
| MS.gene55698.t1 | AT1G29120 | 70.325 | 246 | 64 | 3 | 1 | 244 | 79 | 317 | 1.76e-114 | 337 |
| MS.gene55698.t1 | AT4G25770 | 47.875 | 353 | 158 | 6 | 16 | 367 | 87 | 414 | 4.43e-102 | 308 |
| MS.gene55698.t1 | AT4G25770 | 48.060 | 335 | 146 | 5 | 16 | 348 | 87 | 395 | 2.39e-95 | 291 |
| MS.gene55698.t1 | AT5G51180 | 43.137 | 357 | 176 | 6 | 11 | 367 | 24 | 353 | 1.06e-90 | 277 |
| MS.gene55698.t1 | AT5G51180 | 43.137 | 357 | 176 | 6 | 11 | 367 | 24 | 353 | 1.06e-90 | 277 |
| MS.gene55698.t1 | AT1G10040 | 42.340 | 359 | 177 | 7 | 17 | 369 | 76 | 410 | 1.29e-89 | 276 |
| MS.gene55698.t1 | AT1G10040 | 42.604 | 338 | 164 | 7 | 17 | 348 | 76 | 389 | 2.03e-83 | 260 |
Find 0 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATACTAAAAATTTAC+TGG | + | 57369:6287-6306 | MS.gene55698:intron | 10.0% |
| !! | TAACAAAATTTAAATTATAC+TGG | + | 57369:6188-6207 | MS.gene55698:intron | 10.0% |
| !! | TTACAACTAAAATTTATATA+TGG | - | 57369:5871-5890 | MS.gene55698:intergenic | 10.0% |
| !!! | AGTATAATTTAAATTTTGTT+AGG | - | 57369:6189-6208 | MS.gene55698:intergenic | 10.0% |
| !!! | AGTGATTTTTTTTTTTTTTT+TGG | + | 57369:4962-4981 | MS.gene55698:intron | 10.0% |
| !!! | GTATAATTTAAATTTTGTTA+GGG | - | 57369:6188-6207 | MS.gene55698:intergenic | 10.0% |
| !!! | GTTTATTTAACTAATTTTAA+AGG | - | 57369:7844-7863 | MS.gene55698:intergenic | 10.0% |
| !!! | TCATTTTATAAAAGTAATAT+AGG | + | 57369:4281-4300 | MS.gene55698:intron | 10.0% |
| !! | AAAAAAAAAATGATACTGTT+AGG | + | 57369:6929-6948 | MS.gene55698:intron | 15.0% |
| !! | AAAAAAAAATGATACTGTTA+GGG | + | 57369:6930-6949 | MS.gene55698:intron | 15.0% |
| !! | ATTGAAATTTCTCTAATTAT+TGG | - | 57369:6139-6158 | MS.gene55698:intergenic | 15.0% |
| !! | TGAAATTAAAGACAAAAAAA+TGG | - | 57369:5076-5095 | MS.gene55698:intergenic | 15.0% |
| !! | TGAATTTCAATATGTAATTA+CGG | - | 57369:7667-7686 | MS.gene55698:intergenic | 15.0% |
| !! | TTAGTTAAATAAACAAATGA+TGG | + | 57369:7850-7869 | MS.gene55698:intron | 15.0% |
| !!! | ATTGTTATTTTAAATAGCTT+AGG | - | 57369:5248-5267 | MS.gene55698:intergenic | 15.0% |
| !! | AAATGTACTAACCATAAATT+AGG | - | 57369:4898-4917 | MS.gene55698:intergenic | 20.0% |
| !! | ATCATAGAGAAATTATATAG+TGG | - | 57369:7205-7224 | MS.gene55698:intergenic | 20.0% |
| !! | ATCTTACATATGTTAAATAC+TGG | - | 57369:6860-6879 | MS.gene55698:intergenic | 20.0% |
| !! | ATTATTGAATTATGAGATAG+TGG | - | 57369:4711-4730 | MS.gene55698:intergenic | 20.0% |
| !! | CGAAACTATTAATATAGAAA+TGG | + | 57369:8044-8063 | MS.gene55698:intron | 20.0% |
| !! | GCTAAAGTAATAAAATTGAT+TGG | - | 57369:5772-5791 | MS.gene55698:intergenic | 20.0% |
| !! | TAAAGAAATTACCAAAATTG+AGG | - | 57369:6721-6740 | MS.gene55698:intergenic | 20.0% |
| !! | TAAAGGATTAATTGAAAAAG+AGG | - | 57369:6545-6564 | MS.gene55698:intergenic | 20.0% |
| !! | TAACAAACAGAAAAAGAAAT+AGG | - | 57369:4743-4762 | MS.gene55698:intergenic | 20.0% |
| !! | TAATTAGAGAAATTTCAATC+AGG | + | 57369:6140-6159 | MS.gene55698:intron | 20.0% |
| !! | TTTATGATTGACAAATAAAC+TGG | - | 57369:4255-4274 | MS.gene55698:intergenic | 20.0% |
| !!! | AACTAATTTTAAAGGTTTTC+TGG | - | 57369:7836-7855 | MS.gene55698:intergenic | 20.0% |
| !!! | AATGTTTTGGAATTTTTCTT+TGG | + | 57369:5277-5296 | MS.gene55698:intron | 20.0% |
| !!! | TCTTTAACTTGATATAGATA+TGG | + | 57369:6735-6754 | MS.gene55698:intron | 20.0% |
| !!! | TTATTTCCTTTTATCAAAAC+AGG | + | 57369:5537-5556 | MS.gene55698:intron | 20.0% |
| !!! | TTTTTTTTTTTGGTAAAGCA+TGG | + | 57369:4972-4991 | MS.gene55698:intron | 20.0% |
| ! | AAAAGAAAAATGTAGTTGCA+AGG | - | 57369:7432-7451 | MS.gene55698:intergenic | 25.0% |
| ! | AAAAGAATCAGAACTGAAAT+TGG | - | 57369:5485-5504 | MS.gene55698:intergenic | 25.0% |
| ! | AAAGAATCAGAACTGAAATT+GGG | - | 57369:5484-5503 | MS.gene55698:intergenic | 25.0% |
| ! | AAATGTAAAGTGAGGAAATA+TGG | - | 57369:7461-7480 | MS.gene55698:intergenic | 25.0% |
| ! | AACTTGATATAGATATGGTT+GGG | + | 57369:6740-6759 | MS.gene55698:intron | 25.0% |
| ! | AATGATTGACATCTATTCAA+TGG | - | 57369:7083-7102 | MS.gene55698:intergenic | 25.0% |
| ! | AGAATGCTTATATGTTACTA+GGG | + | 57369:8090-8109 | MS.gene55698:intron | 25.0% |
| ! | AGATTTGTGTGTTAAATGTT+TGG | + | 57369:5455-5474 | MS.gene55698:intron | 25.0% |
| ! | AGTTTAACTGAAAAGAGTAA+TGG | + | 57369:4195-4214 | MS.gene55698:intron | 25.0% |
| ! | ATATATGGCAAAAAAACCAT+AGG | - | 57369:5856-5875 | MS.gene55698:intergenic | 25.0% |
| ! | ATTGACAAATAAACTGGAAA+GGG | - | 57369:4249-4268 | MS.gene55698:intergenic | 25.0% |
| ! | ATTTCAATATGTAATTACGG+AGG | - | 57369:7664-7683 | MS.gene55698:intergenic | 25.0% |
| ! | GAAATAAATGTATGTACGTA+TGG | - | 57369:4364-4383 | MS.gene55698:intergenic | 25.0% |
| ! | GATCCTCGTAATTTATAATT+AGG | + | 57369:7323-7342 | MS.gene55698:intron | 25.0% |
| ! | TAACTTGATATAGATATGGT+TGG | + | 57369:6739-6758 | MS.gene55698:intron | 25.0% |
| ! | TATAGGTATCATGTGAATAA+AGG | - | 57369:5657-5676 | MS.gene55698:intergenic | 25.0% |
| ! | TATCAAGAAGGGTTAATAAT+TGG | + | 57369:7595-7614 | MS.gene55698:intron | 25.0% |
| ! | TGAACGTAAAATTAATTGTC+TGG | + | 57369:5322-5341 | MS.gene55698:intron | 25.0% |
| ! | TGACCTAATTATAAATTACG+AGG | - | 57369:7329-7348 | MS.gene55698:intergenic | 25.0% |
| ! | TGATAATATTCAAACTGTCT+TGG | + | 57369:5927-5946 | MS.gene55698:intron | 25.0% |
| ! | TGATACTGTTTATGAATAGT+TGG | + | 57369:4221-4240 | MS.gene55698:intron | 25.0% |
| ! | TGGATCAAATCAATTAATAC+TGG | + | 57369:7870-7889 | MS.gene55698:intron | 25.0% |
| ! | TGTACATCTGTAACATTTAA+TGG | + | 57369:5032-5051 | MS.gene55698:intron | 25.0% |
| ! | TTCACATGATACCTATAATA+AGG | + | 57369:5660-5679 | MS.gene55698:CDS | 25.0% |
| ! | TTTCAATATGTAATTACGGA+GGG | - | 57369:7663-7682 | MS.gene55698:intergenic | 25.0% |
| !! | AATTTCAGGTGAAAAATGAA+TGG | + | 57369:8573-8592 | MS.gene55698:intron | 25.0% |
| !! | CAATAGTTGTCTTAATGTTT+TGG | + | 57369:5264-5283 | MS.gene55698:intron | 25.0% |
| !! | GTATGCATAAAAACTTTTAC+TGG | + | 57369:4148-4167 | MS.gene55698:intron | 25.0% |
| !! | TAATTTTACGTTCATTGAAG+AGG | - | 57369:5316-5335 | MS.gene55698:intergenic | 25.0% |
| !!! | ATGAAGATTTGTTAAGTGTT+GGG | + | 57369:7965-7984 | MS.gene55698:intron | 25.0% |
| !!! | ATTTATTTCTGTTGGTCATT+TGG | + | 57369:4375-4394 | MS.gene55698:intron | 25.0% |
| !!! | GTACATACATTTATTTCTGT+TGG | + | 57369:4367-4386 | MS.gene55698:intron | 25.0% |
| !!! | TTGTAAATGAGTGTTGTTTA+TGG | + | 57369:5885-5904 | MS.gene55698:intron | 25.0% |
| !!! | TTTTTCTGGTAGTTATGATT+TGG | + | 57369:5110-5129 | MS.gene55698:intron | 25.0% |
| AAATTAGGAAGTTCTTTCCA+AGG | - | 57369:4883-4902 | None:intergenic | 30.0% | |
| AAATTGTTGTGCTGAATTGT+GGG | + | 57369:4103-4122 | MS.gene55698:intron | 30.0% | |
| AACAAAGAAAACATACTGAG+AGG | - | 57369:6653-6672 | MS.gene55698:intergenic | 30.0% | |
| AAGAGAATGAAAGTTATCCA+TGG | - | 57369:7533-7552 | MS.gene55698:intergenic | 30.0% | |
| AAGTGTGAAAAGTCAAACTT+TGG | + | 57369:4323-4342 | MS.gene55698:intron | 30.0% | |
| AATATGAAGAGTTTCAACGA+AGG | - | 57369:6263-6282 | MS.gene55698:intergenic | 30.0% | |
| AATATGATGATTTCTCCCTT+TGG | + | 57369:6808-6827 | MS.gene55698:intron | 30.0% | |
| AATTGCAATACTAGTGTTCT+CGG | + | 57369:7804-7823 | MS.gene55698:intron | 30.0% | |
| ACAAGAAACATCGTCAATAT+TGG | + | 57369:8649-8668 | MS.gene55698:CDS | 30.0% | |
| ACACTAGATCTTGTAAGTAA+AGG | - | 57369:6562-6581 | MS.gene55698:intergenic | 30.0% | |
| ACATCTGTAACATTTAATGG+AGG | + | 57369:5035-5054 | MS.gene55698:intron | 30.0% | |
| ACCATAGGCACATATTTATA+TGG | - | 57369:5841-5860 | MS.gene55698:intergenic | 30.0% | |
| ACCATATAAATATGTGCCTA+TGG | + | 57369:5837-5856 | MS.gene55698:intron | 30.0% | |
| ACTATGTATCTTCTTAACAG+AGG | + | 57369:8383-8402 | MS.gene55698:intron | 30.0% | |
| AGAAATAGAGTTTCCATTAG+TGG | - | 57369:3979-3998 | MS.gene55698:intergenic | 30.0% | |
| AGTGTGAAAAGTCAAACTTT+GGG | + | 57369:4324-4343 | MS.gene55698:intron | 30.0% | |
| ATATGATGATTTCTCCCTTT+GGG | + | 57369:6809-6828 | MS.gene55698:intron | 30.0% | |
| ATGTTGTTATGAGCAAAGAA+AGG | - | 57369:8477-8496 | MS.gene55698:intergenic | 30.0% | |
| ATTCAAGGATTACAACAGTT+GGG | + | 57369:8411-8430 | MS.gene55698:CDS | 30.0% | |
| CTTACATAATACTGCCAATA+TGG | + | 57369:5980-5999 | MS.gene55698:intron | 30.0% | |
| CTTATACTAAGACGTTTACT+GGG | + | 57369:5381-5400 | MS.gene55698:CDS | 30.0% | |
| GAAATGGAAGATGTTTGAAA+TGG | + | 57369:8060-8079 | MS.gene55698:intron | 30.0% | |
| GAAGATTCCATACGAAAATT+TGG | + | 57369:8018-8037 | MS.gene55698:intron | 30.0% | |
| GAATATCATGAAATTGTCGA+AGG | + | 57369:8287-8306 | MS.gene55698:CDS | 30.0% | |
| GAGAATGCTTATATGTTACT+AGG | + | 57369:8089-8108 | MS.gene55698:intron | 30.0% | |
| GATTGACAAATAAACTGGAA+AGG | - | 57369:4250-4269 | MS.gene55698:intergenic | 30.0% | |
| GGAAAAGAAGTTAAAGACAA+AGG | - | 57369:5176-5195 | MS.gene55698:intergenic | 30.0% | |
| GGAAAGAACTTCCTAATTTA+TGG | + | 57369:4884-4903 | MS.gene55698:CDS | 30.0% | |
| TATTAACCCTTCTTGATAGA+AGG | - | 57369:7593-7612 | MS.gene55698:intergenic | 30.0% | |
| TCTGTTAAGAAGATACATAG+TGG | - | 57369:8384-8403 | MS.gene55698:intergenic | 30.0% | |
| TGGAAAATTTCTGTAAGCAA+AGG | + | 57369:6501-6520 | MS.gene55698:intron | 30.0% | |
| TGGAACAAAAATATTGTCAG+TGG | + | 57369:7890-7909 | MS.gene55698:intron | 30.0% | |
| TTGTTCTGTAGTTTAGTGAT+AGG | + | 57369:4401-4420 | MS.gene55698:intron | 30.0% | |
| TTTCGAAAAGCTTGTACTTT+GGG | - | 57369:5725-5744 | MS.gene55698:intergenic | 30.0% | |
| TTTGGTAAAGCATGGATATA+AGG | + | 57369:4980-4999 | MS.gene55698:intron | 30.0% | |
| ! | AAAGGTCTATTTGTGTTGTT+TGG | + | 57369:5211-5230 | MS.gene55698:intron | 30.0% |
| ! | ATGATATTCCACAGTTTTCT+GGG | - | 57369:8276-8295 | MS.gene55698:intergenic | 30.0% |
| ! | GGTGTATCAATGATAACTTT+TGG | + | 57369:6686-6705 | MS.gene55698:intron | 30.0% |
| ! | TATGTAACTAGCACTAGTTT+AGG | - | 57369:7042-7061 | MS.gene55698:intergenic | 30.0% |
| ! | TGGTTCTATAATGTTGTACT+GGG | + | 57369:7251-7270 | MS.gene55698:intron | 30.0% |
| !! | AAAGGCATAATTTTGAGCTA+TGG | - | 57369:7401-7420 | MS.gene55698:intergenic | 30.0% |
| !! | ATCAACATCATTTTCAAGAC+TGG | - | 57369:6226-6245 | MS.gene55698:intergenic | 30.0% |
| !! | ATTTTGTTAGGGTTTGTTTG+TGG | - | 57369:6177-6196 | MS.gene55698:intergenic | 30.0% |
| !! | GTCAGTAATTCAACTTTTTC+TGG | + | 57369:5096-5115 | MS.gene55698:intron | 30.0% |
| !! | TAAATGAGTGTTGTTTATGG+TGG | + | 57369:5888-5907 | MS.gene55698:intron | 30.0% |
| !! | TTGGTTCTATAATGTTGTAC+TGG | + | 57369:7250-7269 | MS.gene55698:intron | 30.0% |
| !!! | GCAATACCTGTTTTGATAAA+AGG | - | 57369:5546-5565 | MS.gene55698:intergenic | 30.0% |
| AAATAAGCCTCCTAAAGAGT+GGG | - | 57369:5614-5633 | None:intergenic | 35.0% | |
| AACATAACATAGAGAACCAC+AGG | - | 57369:4925-4944 | MS.gene55698:intergenic | 35.0% | |
| AATGAATGGTTTCACAATGC+TGG | + | 57369:8587-8606 | MS.gene55698:CDS | 35.0% | |
| ACCAATTGCGGATCTATTAT+AGG | + | 57369:6003-6022 | MS.gene55698:intron | 35.0% | |
| ACTATGTTAACCCAGTTCAT+TGG | + | 57369:7619-7638 | MS.gene55698:intron | 35.0% | |
| ACTTTACATTTAGTACCCTG+AGG | + | 57369:7470-7489 | MS.gene55698:intron | 35.0% | |
| AGAATGAAAGTTATCCATGG+AGG | - | 57369:7530-7549 | MS.gene55698:intergenic | 35.0% | |
| AGCATGGATATAAGGTAACA+CGG | + | 57369:4988-5007 | MS.gene55698:intron | 35.0% | |
| AGGAAAAAGAAGTAAGCAAG+TGG | + | 57369:4505-4524 | MS.gene55698:intron | 35.0% | |
| ATTTCTCTATGATGAAGTGC+TGG | + | 57369:7212-7231 | MS.gene55698:intron | 35.0% | |
| CAAATTGTTGTGCTGAATTG+TGG | + | 57369:4102-4121 | MS.gene55698:intron | 35.0% | |
| CACAAGAACTTCTCAATTTC+AGG | + | 57369:8559-8578 | MS.gene55698:intron | 35.0% | |
| CATCATCTGAGAGATCAATA+AGG | - | 57369:8515-8534 | MS.gene55698:intergenic | 35.0% | |
| CTAATGAACTTCTTGTCACA+TGG | + | 57369:6068-6087 | MS.gene55698:intron | 35.0% | |
| CTTTCGAAAAGCTTGTACTT+TGG | - | 57369:5726-5745 | MS.gene55698:intergenic | 35.0% | |
| GAAAAAGAAGTAAGCAAGTG+GGG | + | 57369:4507-4526 | MS.gene55698:intron | 35.0% | |
| GATTCAAGGATTACAACAGT+TGG | + | 57369:8410-8429 | MS.gene55698:CDS | 35.0% | |
| GATTCCATACGAAAATTTGG+AGG | + | 57369:8021-8040 | MS.gene55698:intron | 35.0% | |
| GCTTATACTAAGACGTTTAC+TGG | + | 57369:5380-5399 | MS.gene55698:CDS | 35.0% | |
| GGAAAAAGAAGTAAGCAAGT+GGG | + | 57369:4506-4525 | MS.gene55698:intron | 35.0% | |
| GTGTGAAAAGTCAAACTTTG+GGG | + | 57369:4325-4344 | MS.gene55698:intron | 35.0% | |
| TATGGAATCTTCCTTGAACA+CGG | - | 57369:8010-8029 | MS.gene55698:intergenic | 35.0% | |
| TCCTGAGGTAATGCATTAAA+AGG | + | 57369:5193-5212 | MS.gene55698:intron | 35.0% | |
| TCTGAAAAGAATCTCCTTTC+TGG | + | 57369:5588-5607 | MS.gene55698:CDS | 35.0% | |
| TGAGTTCGTTAGAACCTTTA+CGG | + | 57369:4614-4633 | MS.gene55698:intron | 35.0% | |
| TGTAAAGTGAGGAAATATGG+TGG | - | 57369:7458-7477 | MS.gene55698:intergenic | 35.0% | |
| TGTGGTTCTCTATGTTATGT+TGG | + | 57369:4924-4943 | MS.gene55698:intron | 35.0% | |
| TTAACAGAGGAGATGATTCA+AGG | + | 57369:8396-8415 | MS.gene55698:intron | 35.0% | |
| TTAGTGATAGGAGTCTGTAT+AGG | + | 57369:4413-4432 | MS.gene55698:intron | 35.0% | |
| TTATCACAGAATAGCGTCAT+CGG | + | 57369:7301-7320 | MS.gene55698:intron | 35.0% | |
| TTATCATTGATACACCTAGC+AGG | - | 57369:6682-6701 | MS.gene55698:intergenic | 35.0% | |
| TTGATATAGATATGGTTGGG+TGG | + | 57369:6743-6762 | MS.gene55698:intron | 35.0% | |
| ! | ACCTTTTAATGCATTACCTC+AGG | - | 57369:5197-5216 | MS.gene55698:intergenic | 35.0% |
| ! | AGGGTACTAAATGTAAAGTG+AGG | - | 57369:7469-7488 | MS.gene55698:intergenic | 35.0% |
| ! | ATCTTGGTGTAAGAGGAAAA+AGG | + | 57369:5800-5819 | MS.gene55698:CDS | 35.0% |
| ! | CAAAGTACAAGCTTTTCGAA+AGG | + | 57369:5724-5743 | MS.gene55698:CDS | 35.0% |
| ! | CATGATATTCCACAGTTTTC+TGG | - | 57369:8277-8296 | MS.gene55698:intergenic | 35.0% |
| ! | GAAACCTTTTCTTCTTACTG+AGG | + | 57369:4650-4669 | MS.gene55698:intron | 35.0% |
| ! | TCAGCTTTCACTCATCATTT+TGG | + | 57369:8451-8470 | MS.gene55698:CDS | 35.0% |
| ! | TGCTTTCATTTTATGCCAAC+AGG | - | 57369:7722-7741 | MS.gene55698:intergenic | 35.0% |
| ! | TTTCTAGCATGGGAAATTCT+AGG | + | 57369:3994-4013 | MS.gene55698:CDS | 35.0% |
| ! | TTTTTACTGATACAGCACAG+CGG | + | 57369:4823-4842 | MS.gene55698:intron | 35.0% |
| !! | AAGATACATAGTGGCTTTAG+TGG | - | 57369:8375-8394 | MS.gene55698:intergenic | 35.0% |
| !! | CAGCAAGCTTTTCTAGTATT+GGG | - | 57369:6372-6391 | MS.gene55698:intergenic | 35.0% |
| !! | GGAAACTCTATTTCTAGCAT+GGG | + | 57369:3984-4003 | MS.gene55698:CDS | 35.0% |
| !! | GTCTTTAACTTCTTTTCCTG+AGG | + | 57369:5178-5197 | MS.gene55698:intron | 35.0% |
| !! | GTGCTATTTATGCATCTTGT+TGG | + | 57369:7912-7931 | MS.gene55698:intron | 35.0% |
| !! | TGGAAACTCTATTTCTAGCA+TGG | + | 57369:3983-4002 | MS.gene55698:CDS | 35.0% |
| !! | TTCTCTGTGTTGATGATTCA+CGG | + | 57369:5950-5969 | MS.gene55698:intron | 35.0% |
| !! | TTTGTTAAGTGTTGGGAAAG+AGG | + | 57369:7972-7991 | MS.gene55698:intron | 35.0% |
| AACTTCAACCGTTGTGCTTA+GGG | + | 57369:6095-6114 | MS.gene55698:intron | 40.0% | |
| AAGACGTTTACTGGGATTGA+TGG | + | 57369:5389-5408 | MS.gene55698:CDS | 40.0% | |
| AAGATCTTGGATCTGCTTTG+TGG | + | 57369:7118-7137 | MS.gene55698:intron | 40.0% | |
| AAGGATTACAACAGTTGGGA+TGG | + | 57369:8415-8434 | MS.gene55698:CDS | 40.0% | |
| AAGTCACAAGACAACCCAAA+GGG | - | 57369:6826-6845 | MS.gene55698:intergenic | 40.0% | |
| AATGCTACCACATGCATTCT+TGG | - | 57369:7750-7769 | MS.gene55698:intergenic | 40.0% | |
| ACCTATAATAAGGACCAACC+TGG | + | 57369:5670-5689 | MS.gene55698:CDS | 40.0% | |
| ACTTTAGCATCTCCACATCT+TGG | + | 57369:5784-5803 | MS.gene55698:CDS | 40.0% | |
| AGATGCCATGAACAAGAACA+AGG | - | 57369:4037-4056 | MS.gene55698:intergenic | 40.0% | |
| AGATTAGGCAACCAATGAAC+TGG | - | 57369:7633-7652 | MS.gene55698:intergenic | 40.0% | |
| AGCTCCTCAGTAAGAAGAAA+AGG | - | 57369:4657-4676 | MS.gene55698:intergenic | 40.0% | |
| AGGTAGTCCTTCTATCAAGA+AGG | + | 57369:7583-7602 | MS.gene55698:intron | 40.0% | |
| ATGGCTTCTGATTGTGAAGA+TGG | + | 57369:6481-6500 | MS.gene55698:CDS | 40.0% | |
| CAAATAAGCCTCCTAAAGAG+TGG | - | 57369:5615-5634 | MS.gene55698:intergenic | 40.0% | |
| CACACACACTCTCTTATTGA+GGG | - | 57369:4572-4591 | MS.gene55698:intergenic | 40.0% | |
| CAGCTTTGCACATAAGATCT+TGG | + | 57369:7105-7124 | MS.gene55698:intron | 40.0% | |
| CATCTCCTTGTTCTTGTTCA+TGG | + | 57369:4029-4048 | MS.gene55698:CDS | 40.0% | |
| CATCTGAGAGATCAATAAGG+AGG | - | 57369:8512-8531 | MS.gene55698:intergenic | 40.0% | |
| CATGAACAAGAACAAGGAGA+TGG | - | 57369:4031-4050 | MS.gene55698:intergenic | 40.0% | |
| CCAACAAATAAAGGAGCCAT+AGG | - | 57369:6397-6416 | MS.gene55698:intergenic | 40.0% | |
| CGGGTTATGTGTTGTAAACT+TGG | + | 57369:7942-7961 | MS.gene55698:intron | 40.0% | |
| CTATCAACCCTCCAAACTTT+GGG | - | 57369:4484-4503 | MS.gene55698:intergenic | 40.0% | |
| CTGTCAATTGAAGTCCACAA+GGG | + | 57369:7159-7178 | MS.gene55698:intron | 40.0% | |
| GATTAGGCAACCAATGAACT+GGG | - | 57369:7632-7651 | MS.gene55698:intergenic | 40.0% | |
| GCATATGCTTTGCAAATGCA+AGG | - | 57369:6037-6056 | MS.gene55698:intergenic | 40.0% | |
| GCCTATAATAGATCCGCAAT+TGG | - | 57369:6007-6026 | MS.gene55698:intergenic | 40.0% | |
| GCTGGTATCCATCTAAAGAT+TGG | - | 57369:8151-8170 | MS.gene55698:intergenic | 40.0% | |
| GGGAGGTAGGTTATAGTATA+AGG | + | 57369:7179-7198 | MS.gene55698:intron | 40.0% | |
| GGTAGTCCTTCTATCAAGAA+GGG | + | 57369:7584-7603 | MS.gene55698:intron | 40.0% | |
| GTTAGTACATTTCTCACCTG+TGG | + | 57369:4906-4925 | MS.gene55698:intron | 40.0% | |
| TATCCATCTAAAGATTGGCG+AGG | - | 57369:8146-8165 | MS.gene55698:intergenic | 40.0% | |
| TCACACACACTCTCTTATTG+AGG | - | 57369:4573-4592 | MS.gene55698:intergenic | 40.0% | |
| TCGTTAGAACCTTTACGGTT+AGG | + | 57369:4619-4638 | MS.gene55698:intron | 40.0% | |
| TCTATCAACCCTCCAAACTT+TGG | - | 57369:4485-4504 | MS.gene55698:intergenic | 40.0% | |
| TCTGTCAATTGAAGTCCACA+AGG | + | 57369:7158-7177 | MS.gene55698:intron | 40.0% | |
| TCTTTGTTCTACAACCTGCT+AGG | + | 57369:6665-6684 | MS.gene55698:intron | 40.0% | |
| TGCATTTGCAAAGCATATGC+TGG | + | 57369:6037-6056 | MS.gene55698:intron | 40.0% | |
| TGTAGGAGTAATTGCTCATG+TGG | + | 57369:8610-8629 | MS.gene55698:CDS | 40.0% | |
| TGTTACTGTAGATCTGCACT+TGG | + | 57369:6579-6598 | MS.gene55698:intron | 40.0% | |
| TGTTCTTGTTCATGGCATCT+TGG | + | 57369:4037-4056 | MS.gene55698:CDS | 40.0% | |
| TGTTGGGAAAGAGGTAATGA+TGG | + | 57369:7981-8000 | MS.gene55698:intron | 40.0% | |
| TTCCAGCTTCCATTTCTGTT+GGG | + | 57369:6343-6362 | MS.gene55698:intron | 40.0% | |
| TTTCCAGCTTCCATTTCTGT+TGG | + | 57369:6342-6361 | MS.gene55698:intron | 40.0% | |
| TTTCCTCTTACACCAAGATG+TGG | - | 57369:5799-5818 | MS.gene55698:intergenic | 40.0% | |
| ! | AATAAGAGAGTGTGTGTGAG+GGG | + | 57369:4574-4593 | MS.gene55698:intron | 40.0% |
| ! | AGTACAAGCTTTTCGAAAGG+AGG | + | 57369:5727-5746 | MS.gene55698:CDS | 40.0% |
| ! | CAATAAGAGAGTGTGTGTGA+GGG | + | 57369:4573-4592 | MS.gene55698:intron | 40.0% |
| ! | CCTATGGCTCCTTTATTTGT+TGG | + | 57369:6394-6413 | MS.gene55698:CDS | 40.0% |
| ! | GTACAAGCTTTTCGAAAGGA+GGG | + | 57369:5728-5747 | MS.gene55698:CDS | 40.0% |
| ! | TCAATAAGAGAGTGTGTGTG+AGG | + | 57369:4572-4591 | MS.gene55698:intron | 40.0% |
| ! | TGGCTCCTTTATTTGTTGGT+CGG | + | 57369:6398-6417 | MS.gene55698:CDS | 40.0% |
| ! | TTCGCCTCCAAATTTTCGTA+TGG | - | 57369:8028-8047 | MS.gene55698:intergenic | 40.0% |
| !! | AAAGTCAAACTTTGGGGCAA+TGG | + | 57369:4331-4350 | MS.gene55698:intron | 40.0% |
| !! | AAGTGCTGGTCTATCTCTAT+GGG | + | 57369:7226-7245 | MS.gene55698:intron | 40.0% |
| !! | AAGTTTGGAGGGTTGATAGA+AGG | + | 57369:4485-4504 | MS.gene55698:intron | 40.0% |
| !! | ACCAGGTTGGTCCTTATTAT+AGG | - | 57369:5674-5693 | MS.gene55698:intergenic | 40.0% |
| !! | GCAGCAAGCTTTTCTAGTAT+TGG | - | 57369:6373-6392 | MS.gene55698:intergenic | 40.0% |
| !! | TAATGCGGTTTGTTGACAGA+GGG | - | 57369:7500-7519 | MS.gene55698:intergenic | 40.0% |
| !! | TGTGTTGATGATTCACGGTT+TGG | + | 57369:5955-5974 | MS.gene55698:intron | 40.0% |
| AACAATCATCTGTGTACCCG+AGG | + | 57369:7559-7578 | MS.gene55698:intron | 45.0% | |
| AACAGAAGAGGTGGTCTGTT+GGG | - | 57369:6457-6476 | MS.gene55698:intergenic | 45.0% | |
| AAGTAAGCAAGTGGGGACAA+AGG | + | 57369:4514-4533 | MS.gene55698:intron | 45.0% | |
| AATGATGGCATCCGTGTTCA+AGG | + | 57369:7996-8015 | MS.gene55698:intron | 45.0% | |
| ACAAGAACAAGGAGATGGTC+TGG | - | 57369:4026-4045 | MS.gene55698:intergenic | 45.0% | |
| ACCAACACATCACCTTCTAC+TGG | - | 57369:4445-4464 | MS.gene55698:intergenic | 45.0% | |
| ACCACCTCTTCTGTTGAGAA+TGG | + | 57369:6462-6481 | MS.gene55698:CDS | 45.0% | |
| ACCAGTAGAAGGTGATGTGT+TGG | + | 57369:4441-4460 | MS.gene55698:intron | 45.0% | |
| ACTATAACCTACCTCCCTTG+TGG | - | 57369:7176-7195 | MS.gene55698:intergenic | 45.0% | |
| AGTAAGCAAGTGGGGACAAA+GGG | + | 57369:4515-4534 | MS.gene55698:intron | 45.0% | |
| AGTAGAAGGTGATGTGTTGG+TGG | + | 57369:4444-4463 | MS.gene55698:intron | 45.0% | |
| AGTCAGTTGTTCCTTACCGA+TGG | + | 57369:6427-6446 | MS.gene55698:CDS | 45.0% | |
| ATAGAAGGACTACCTACCTC+GGG | - | 57369:7578-7597 | MS.gene55698:intergenic | 45.0% | |
| ATCCTCGATAAGGAGGGAAA+TGG | + | 57369:6771-6790 | MS.gene55698:CDS | 45.0% | |
| ATCTTGGATCTGCTTTGTGG+TGG | + | 57369:7121-7140 | MS.gene55698:intron | 45.0% | |
| ATGTAATTACGGAGGGACAC+TGG | - | 57369:7656-7675 | MS.gene55698:intergenic | 45.0% | |
| ATTATTGGAGCTGCTAGCGA+AGG | - | 57369:6124-6143 | MS.gene55698:intergenic | 45.0% | |
| ATTCAACATCAACCACGTGC+TGG | - | 57369:8169-8188 | MS.gene55698:intergenic | 45.0% | |
| CAACTTCAACCGTTGTGCTT+AGG | + | 57369:6094-6113 | MS.gene55698:intron | 45.0% | |
| CAAGAACAAGGAGATGGTCT+GGG | - | 57369:4025-4044 | MS.gene55698:intergenic | 45.0% | |
| CAAGTCACAAGACAACCCAA+AGG | - | 57369:6827-6846 | MS.gene55698:intergenic | 45.0% | |
| CATGTGTCCAAGAATGCATG+TGG | + | 57369:7740-7759 | MS.gene55698:intron | 45.0% | |
| CCAGTCCGACCAACAAATAA+AGG | - | 57369:6406-6425 | MS.gene55698:intergenic | 45.0% | |
| CTGCCAATATGGACCAATTG+CGG | + | 57369:5991-6010 | MS.gene55698:intron | 45.0% | |
| CTTCAATTGACAGACACCAG+TGG | - | 57369:7152-7171 | MS.gene55698:intergenic | 45.0% | |
| GAAGCCATTCTCAACAGAAG+AGG | - | 57369:6469-6488 | MS.gene55698:intergenic | 45.0% | |
| GATAGAAGGACTACCTACCT+CGG | - | 57369:7579-7598 | MS.gene55698:intergenic | 45.0% | |
| GATCCGCAATTGGTCCATAT+TGG | - | 57369:5997-6016 | MS.gene55698:intergenic | 45.0% | |
| GTAAGGAGAAGCCCAAAGTT+TGG | + | 57369:4470-4489 | MS.gene55698:intron | 45.0% | |
| TACAACACATAACCCGACAC+TGG | - | 57369:7938-7957 | MS.gene55698:intergenic | 45.0% | |
| TACTGAGGAGCTTATGCTCT+GGG | + | 57369:4665-4684 | MS.gene55698:intron | 45.0% | |
| TATAGGCCTGAACCAGTAGA+AGG | + | 57369:4430-4449 | MS.gene55698:intron | 45.0% | |
| TCAATTGAAGTCCACAAGGG+AGG | + | 57369:7162-7181 | MS.gene55698:intron | 45.0% | |
| TCCAGAAGCAGTGAAAGCAA+AGG | + | 57369:8226-8245 | MS.gene55698:CDS | 45.0% | |
| TCCTTTGCTTTCACTGCTTC+TGG | - | 57369:8230-8249 | MS.gene55698:intergenic | 45.0% | |
| TGGTCTGTTGGGTTTACCAT+CGG | - | 57369:6446-6465 | MS.gene55698:intergenic | 45.0% | |
| TGGTGATCTTGCACACAGAA+CGG | + | 57369:5690-5709 | MS.gene55698:CDS | 45.0% | |
| TGGTGTAAGAGGAAAAAGGC+AGG | + | 57369:5804-5823 | MS.gene55698:CDS | 45.0% | |
| TGGTTTCACAATGCTGGTGT+AGG | + | 57369:8593-8612 | MS.gene55698:CDS | 45.0% | |
| TGTTGGGTTTACCATCGGTA+AGG | - | 57369:6441-6460 | MS.gene55698:intergenic | 45.0% | |
| TTACTGAGGAGCTTATGCTC+TGG | + | 57369:4664-4683 | MS.gene55698:intron | 45.0% | |
| TTATTGGAGCTGCTAGCGAA+GGG | - | 57369:6123-6142 | MS.gene55698:intergenic | 45.0% | |
| TTGTTCATGGCATCTTGGCT+AGG | + | 57369:4042-4061 | MS.gene55698:CDS | 45.0% | |
| TTTACTGGGATTGATGGAGC+AGG | + | 57369:5395-5414 | MS.gene55698:CDS | 45.0% | |
| TTTAGATGGATACCAGCACG+TGG | + | 57369:8154-8173 | MS.gene55698:CDS | 45.0% | |
| TTTGCTTTCACTGCTTCTGG+AGG | - | 57369:8227-8246 | MS.gene55698:intergenic | 45.0% | |
| ! | CATGGAGGTGTATGCTAATG+CGG | - | 57369:7515-7534 | MS.gene55698:intergenic | 45.0% |
| ! | CCTTTATTTGTTGGTCGGAC+TGG | + | 57369:6403-6422 | MS.gene55698:CDS | 45.0% |
| ! | GAGCAAGAGTTTGATTTCGC+AGG | - | 57369:5136-5155 | MS.gene55698:intergenic | 45.0% |
| ! | GGCACTCTCTTCCTCAATTT+TGG | + | 57369:6707-6726 | MS.gene55698:intron | 45.0% |
| ! | GTAGAAGGTGATGTGTTGGT+GGG | + | 57369:4445-4464 | MS.gene55698:intron | 45.0% |
| ! | TCCACAGTTTTCTGGGTATC+AGG | - | 57369:8269-8288 | MS.gene55698:intergenic | 45.0% |
| ! | TCTCCACATCTTGGTGTAAG+AGG | + | 57369:5793-5812 | MS.gene55698:CDS | 45.0% |
| !! | ACATCACCTTCTACTGGTTC+AGG | - | 57369:4439-4458 | MS.gene55698:intergenic | 45.0% |
| !! | AGAAAAGCTTGCTGCACCTA+TGG | + | 57369:6378-6397 | MS.gene55698:CDS | 45.0% |
| !! | CTAATGCGGTTTGTTGACAG+AGG | - | 57369:7501-7520 | MS.gene55698:intergenic | 45.0% |
| !! | GAAGTGCTGGTCTATCTCTA+TGG | + | 57369:7225-7244 | MS.gene55698:intron | 45.0% |
| AGGAGAAGCCCAAAGTTTGG+AGG | + | 57369:4473-4492 | MS.gene55698:intron | 50.0% | |
| AGTTGCAAGGTCGAGTGCAA+AGG | - | 57369:7419-7438 | MS.gene55698:intergenic | 50.0% | |
| ATCATCTGTGTACCCGAGGT+AGG | + | 57369:7563-7582 | MS.gene55698:intron | 50.0% | |
| ATTGGGACGCCCAACAGAAA+TGG | - | 57369:6355-6374 | MS.gene55698:intergenic | 50.0% | |
| CAACAGAAGAGGTGGTCTGT+TGG | - | 57369:6458-6477 | MS.gene55698:intergenic | 50.0% | |
| CCATCTAAAGATTGGCGAGG+AGG | - | 57369:8143-8162 | MS.gene55698:intergenic | 50.0% | |
| CCTCCTCGCCAATCTTTAGA+TGG | + | 57369:8140-8159 | MS.gene55698:CDS | 50.0% | |
| CGAAAGGAGGGATGATTGCT+GGG | + | 57369:5740-5759 | MS.gene55698:CDS | 50.0% | |
| CGCATTAGCATACACCTCCA+TGG | + | 57369:7513-7532 | MS.gene55698:intron | 50.0% | |
| CTCCATTTCCCTCCTTATCG+AGG | - | 57369:6776-6795 | MS.gene55698:intergenic | 50.0% | |
| CTCTCACTGCCTAACCGTAA+AGG | - | 57369:4631-4650 | MS.gene55698:intergenic | 50.0% | |
| CTGGTCTATCTCTATGGGCT+TGG | + | 57369:7231-7250 | MS.gene55698:intron | 50.0% | |
| CTTTGTGGTGGTAAGTCCAC+TGG | + | 57369:7133-7152 | MS.gene55698:intron | 50.0% | |
| GAAGGGAACCCTAAGCACAA+CGG | - | 57369:6106-6125 | MS.gene55698:intergenic | 50.0% | |
| GAGGGAAATGGAGCTCAGTA+AGG | + | 57369:6783-6802 | MS.gene55698:CDS | 50.0% | |
| GCCATTCTCAACAGAAGAGG+TGG | - | 57369:6466-6485 | MS.gene55698:intergenic | 50.0% | |
| GCCTGATACCCAGAAAACTG+TGG | + | 57369:8265-8284 | MS.gene55698:CDS | 50.0% | |
| GCTATGGCTCAGTGTCTATG+AGG | - | 57369:7385-7404 | MS.gene55698:intergenic | 50.0% | |
| GGAAAAAGGCAGGTCTGTTC+TGG | + | 57369:5814-5833 | MS.gene55698:intron | 50.0% | |
| GGAGAAGCCCAAAGTTTGGA+GGG | + | 57369:4474-4493 | MS.gene55698:intron | 50.0% | |
| GTTCTGTGTGCAAGATCACC+AGG | - | 57369:5691-5710 | MS.gene55698:intergenic | 50.0% | |
| TCCTAAAGAGTGGGCCAGAA+AGG | - | 57369:5605-5624 | MS.gene55698:intergenic | 50.0% | |
| TCGAAAGGAGGGATGATTGC+TGG | + | 57369:5739-5758 | MS.gene55698:CDS | 50.0% | |
| TGCATCTTGTTGGCCAGTGT+CGG | + | 57369:7922-7941 | MS.gene55698:intron | 50.0% | |
| TGTGTGCAAGATCACCAGGT+TGG | - | 57369:5687-5706 | MS.gene55698:intergenic | 50.0% | |
| TTGAAGTCCACAAGGGAGGT+AGG | + | 57369:7166-7185 | MS.gene55698:intron | 50.0% | |
| TTGACAGAGGGTCTACCTCA+GGG | - | 57369:7488-7507 | MS.gene55698:intergenic | 50.0% | |
| ! | ACTGCTTCTGGAGGAAACTG+AGG | - | 57369:8218-8237 | MS.gene55698:intergenic | 50.0% |
| ! | CTGCTTCTGGAGGAAACTGA+GGG | - | 57369:8217-8236 | MS.gene55698:intergenic | 50.0% |
| ! | TCCTTTCTGGCCCACTCTTT+AGG | + | 57369:5601-5620 | MS.gene55698:CDS | 50.0% |
| ! | TGATGTGTTGGTGGGCAGTA+AGG | + | 57369:4453-4472 | MS.gene55698:intron | 50.0% |
| ! | TTTCTGGCCCACTCTTTAGG+AGG | + | 57369:5604-5623 | MS.gene55698:CDS | 50.0% |
| !! | CGTTCATTGAAGAGGCACTC+AGG | - | 57369:5308-5327 | MS.gene55698:intergenic | 50.0% |
| !! | GCAGAGTTGAAAAAGCGCCT+TGG | + | 57369:4863-4882 | MS.gene55698:CDS | 50.0% |
| AAGCAAGTGGGGACAAAGGG+AGG | + | 57369:4518-4537 | MS.gene55698:intron | 55.0% | |
| ACGGAGGGACACTGGAGATT+AGG | - | 57369:7648-7667 | MS.gene55698:intergenic | 55.0% | |
| ACTGATACAGCACAGCGGAC+TGG | + | 57369:4828-4847 | MS.gene55698:intron | 55.0% | |
| ACTGCAGAGTCACTGCCTGT+TGG | + | 57369:7704-7723 | MS.gene55698:intron | 55.0% | |
| AGCAAGTGGGGACAAAGGGA+GGG | + | 57369:4519-4538 | MS.gene55698:intron | 55.0% | |
| AGGAGGGATGATTGCTGGGT+TGG | + | 57369:5744-5763 | MS.gene55698:CDS | 55.0% | |
| CGCCCAACAGAAATGGAAGC+TGG | - | 57369:6348-6367 | MS.gene55698:intergenic | 55.0% | |
| GAAACTGAGGGCCATCGGAA+GGG | - | 57369:8205-8224 | MS.gene55698:intergenic | 55.0% | |
| GATCTTGCACACAGAACGGC+AGG | + | 57369:5694-5713 | MS.gene55698:CDS | 55.0% | |
| GCATCTTGTTGGCCAGTGTC+GGG | + | 57369:7923-7942 | MS.gene55698:intron | 55.0% | |
| GCGCACATCCTCGATAAGGA+GGG | + | 57369:6765-6784 | MS.gene55698:CDS | 55.0% | |
| GGCAGTGACTCTGCAGTGAT+AGG | - | 57369:7701-7720 | MS.gene55698:intergenic | 55.0% | |
| GTTGACAGAGGGTCTACCTC+AGG | - | 57369:7489-7508 | MS.gene55698:intergenic | 55.0% | |
| TGGAGGAAACTGAGGGCCAT+CGG | - | 57369:8210-8229 | MS.gene55698:intergenic | 55.0% | |
| ! | AGTGTGTGTGAGGGGTGTAG+AGG | + | 57369:4582-4601 | MS.gene55698:intron | 55.0% |
| ! | GTGTGTGTGAGGGGTGTAGA+GGG | + | 57369:4583-4602 | MS.gene55698:intron | 55.0% |
| ! | TGAGGAGCTTATGCTCTGGG+CGG | + | 57369:4668-4687 | MS.gene55698:intron | 55.0% |
| AAGTGGGGACAAAGGGAGGG+TGG | + | 57369:4522-4541 | MS.gene55698:intron | 60.0% | |
| ACAAAGGGAGGGTGGTGAGC+TGG | + | 57369:4530-4549 | MS.gene55698:intron | 60.0% | |
| GGAAACTGAGGGCCATCGGA+AGG | - | 57369:8206-8225 | MS.gene55698:intergenic | 60.0% | |
| GGCGCACATCCTCGATAAGG+AGG | + | 57369:6764-6783 | MS.gene55698:CDS | 60.0% | |
| GGTGGCGCACATCCTCGATA+AGG | + | 57369:6761-6780 | MS.gene55698:CDS | 60.0% | |
| GGCCATCGGAAGGGACTGCA+GGG | - | 57369:8196-8215 | MS.gene55698:intergenic | 65.0% | |
| TGCCCTGCAGTCCCTTCCGA+TGG | + | 57369:8191-8210 | MS.gene55698:CDS | 65.0% | |
| GGGCCATCGGAAGGGACTGC+AGG | - | 57369:8197-8216 | MS.gene55698:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57369 | gene | 3966 | 8685 | 3966 | ID=MS.gene55698 |
| 57369 | mRNA | 3966 | 8685 | 3966 | ID=MS.gene55698.t1;Parent=MS.gene55698 |
| 57369 | exon | 3966 | 4063 | 3966 | ID=MS.gene55698.t1.exon1;Parent=MS.gene55698.t1 |
| 57369 | CDS | 3966 | 4063 | 3966 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 4838 | 4905 | 4838 | ID=MS.gene55698.t1.exon2;Parent=MS.gene55698.t1 |
| 57369 | CDS | 4838 | 4905 | 4838 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 5366 | 5436 | 5366 | ID=MS.gene55698.t1.exon3;Parent=MS.gene55698.t1 |
| 57369 | CDS | 5366 | 5436 | 5366 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 5559 | 5825 | 5559 | ID=MS.gene55698.t1.exon4;Parent=MS.gene55698.t1 |
| 57369 | CDS | 5559 | 5825 | 5559 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 6349 | 6512 | 6349 | ID=MS.gene55698.t1.exon5;Parent=MS.gene55698.t1 |
| 57369 | CDS | 6349 | 6512 | 6349 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 6590 | 6645 | 6590 | ID=MS.gene55698.t1.exon6;Parent=MS.gene55698.t1 |
| 57369 | CDS | 6590 | 6645 | 6590 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 6752 | 6804 | 6752 | ID=MS.gene55698.t1.exon7;Parent=MS.gene55698.t1 |
| 57369 | CDS | 6752 | 6804 | 6752 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 8140 | 8308 | 8140 | ID=MS.gene55698.t1.exon8;Parent=MS.gene55698.t1 |
| 57369 | CDS | 8140 | 8308 | 8140 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 8403 | 8500 | 8403 | ID=MS.gene55698.t1.exon9;Parent=MS.gene55698.t1 |
| 57369 | CDS | 8403 | 8500 | 8403 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| 57369 | exon | 8581 | 8685 | 8581 | ID=MS.gene55698.t1.exon10;Parent=MS.gene55698.t1 |
| 57369 | CDS | 8581 | 8685 | 8581 | ID=cds.MS.gene55698.t1;Parent=MS.gene55698.t1 |
| Gene Sequence |
| Protein sequence |
