AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024151


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024151.t1 MTR_7g081700 99.505 202 1 0 1 202 1 202 5.44e-152 419
MS.gene024151.t1 MTR_8g006970 93.939 198 11 1 6 202 20 217 1.08e-138 386
MS.gene024151.t1 MTR_8g006970 94.186 172 10 0 1 172 1 172 1.21e-119 337
MS.gene024151.t1 MTR_2g005500 77.273 198 44 1 4 200 5 202 3.92e-114 323
MS.gene024151.t1 MTR_4g099470 86.705 173 23 0 30 202 6 178 1.44e-113 321
MS.gene024151.t1 MTR_1g115325 60.488 205 72 3 4 200 11 214 7.00e-87 255
MS.gene024151.t1 MTR_1g068740 61.058 208 70 4 4 202 11 216 1.24e-86 254
MS.gene024151.t1 MTR_1g068730 60.577 208 71 4 4 202 11 216 5.24e-86 253
MS.gene024151.t1 MTR_7g100020 61.058 208 70 4 4 202 11 216 6.81e-86 253
MS.gene024151.t1 MTR_4g063160 59.903 207 71 5 4 200 11 215 1.22e-82 244
MS.gene024151.t1 MTR_2g096550 54.902 204 81 4 5 200 12 212 2.60e-75 226
MS.gene024151.t1 MTR_2g005500 57.576 198 43 2 4 200 5 162 8.51e-75 223
MS.gene024151.t1 MTR_1g068740 65.772 149 50 1 4 152 11 158 3.60e-68 207
MS.gene024151.t1 MTR_1g068730 67.133 143 46 1 4 146 11 152 2.20e-67 204
MS.gene024151.t1 MTR_4g064897 45.972 211 105 2 1 202 5 215 6.39e-65 199
MS.gene024151.t1 MTR_2g005510 46.667 210 101 2 4 202 11 220 3.24e-62 192
MS.gene024151.t1 MTR_6g021790 47.619 210 96 3 5 201 3 211 4.13e-62 192
MS.gene024151.t1 MTR_2g027660 46.411 209 100 1 5 201 3 211 9.97e-62 191
MS.gene024151.t1 MTR_2g014990 47.393 211 101 1 2 202 7 217 1.56e-61 191
MS.gene024151.t1 MTR_8g093740 49.254 201 97 4 4 200 9 208 1.98e-60 187
MS.gene024151.t1 MTR_4g088090 45.972 211 104 1 2 202 7 217 3.60e-60 187
MS.gene024151.t1 MTR_7g051940 47.549 204 98 1 7 201 12 215 3.77e-60 187
MS.gene024151.t1 MTR_2g075950 46.919 211 102 2 2 202 7 217 5.81e-60 187
MS.gene024151.t1 MTR_7g103070 48.515 202 99 4 5 201 13 214 7.03e-60 186
MS.gene024151.t1 MTR_3g069510 45.283 212 106 3 1 202 5 216 1.73e-59 186
MS.gene024151.t1 MTR_4g079350 45.972 211 104 1 2 202 7 217 1.88e-59 186
MS.gene024151.t1 MTR_8g031660 47.692 195 94 1 5 199 3 189 3.76e-59 184
MS.gene024151.t1 MTR_1g029450 50.739 203 94 5 4 201 13 214 6.61e-59 184
MS.gene024151.t1 MTR_3g086980 43.868 212 106 2 2 200 10 221 4.24e-58 182
MS.gene024151.t1 MTR_2g090865 45.972 211 105 1 1 202 4 214 1.73e-57 181
MS.gene024151.t1 MTR_0262s0050 43.602 211 107 2 2 200 9 219 2.34e-57 180
MS.gene024151.t1 MTR_1g078200 45.283 212 100 3 6 201 12 223 2.99e-57 180
MS.gene024151.t1 MTR_3g096350 47.761 201 100 4 4 200 8 207 4.44e-57 179
MS.gene024151.t1 MTR_8g089985 50.595 168 83 0 2 169 11 178 8.77e-57 179
MS.gene024151.t1 MTR_2g083860 46.445 211 100 3 4 202 9 218 1.60e-56 178
MS.gene024151.t1 MTR_8g031870 50.610 164 81 0 7 170 5 168 2.61e-56 177
MS.gene024151.t1 MTR_1g052475 48.889 180 91 1 2 181 9 187 3.43e-56 177
MS.gene024151.t1 MTR_1g062760 47.761 201 99 5 5 200 11 210 2.29e-55 175
MS.gene024151.t1 MTR_8g036220 49.123 171 87 0 6 176 14 184 8.16e-55 174
MS.gene024151.t1 MTR_8g027220 43.434 198 112 0 1 198 19 216 1.26e-54 174
MS.gene024151.t1 MTR_1g090717 48.529 204 101 4 2 201 9 212 1.84e-54 172
MS.gene024151.t1 MTR_6g079550 45.918 196 104 1 1 196 5 198 4.76e-54 172
MS.gene024151.t1 MTR_8g107070 50.265 189 85 1 1 180 7 195 4.88e-54 173
MS.gene024151.t1 MTR_8g031680 48.485 165 85 0 5 169 3 167 7.79e-54 171
MS.gene024151.t1 MTR_7g405790 49.133 173 88 0 7 179 14 186 7.85e-54 171
MS.gene024151.t1 MTR_8g031830 49.032 155 79 0 7 161 5 159 1.69e-49 159
MS.gene024151.t1 MTR_3g064390 40.625 192 111 1 10 201 12 200 6.62e-48 155
MS.gene024151.t1 MTR_5g076590 40.104 192 112 1 10 201 12 200 1.68e-46 152
MS.gene024151.t1 MTR_3g096350 57.576 132 51 4 4 131 8 138 5.48e-46 149
MS.gene024151.t1 MTR_3g096350 60.163 123 46 3 4 124 8 129 1.95e-45 148
MS.gene024151.t1 MTR_8g093740 45.294 170 89 3 35 200 6 175 1.06e-44 147
MS.gene024151.t1 MTR_8g090215 38.500 200 113 2 9 201 10 206 7.43e-44 145
MS.gene024151.t1 MTR_2g102060 37.436 195 114 2 10 202 12 200 9.78e-44 145
MS.gene024151.t1 MTR_8g103550 39.175 194 110 3 10 201 11 198 1.07e-43 145
MS.gene024151.t1 MTR_7g117910 50.794 126 62 0 6 131 18 143 1.46e-42 142
MS.gene024151.t1 MTR_1g094220 42.236 161 92 1 10 169 33 193 1.83e-42 142
MS.gene024151.t1 MTR_3g087160 42.857 161 92 0 9 169 10 170 4.37e-42 141
MS.gene024151.t1 MTR_5g013900 40.994 161 95 0 9 169 10 170 8.61e-42 140
MS.gene024151.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 8.81e-42 140
MS.gene024151.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 1.28e-41 140
MS.gene024151.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 3.58e-41 139
MS.gene024151.t1 MTR_4g098950 36.683 199 117 2 9 201 10 205 4.33e-41 138
MS.gene024151.t1 MTR_7g103070 46.405 153 77 4 54 201 6 158 8.71e-40 134
MS.gene024151.t1 MTR_2g101890 37.811 201 114 5 8 200 10 207 1.63e-38 132
MS.gene024151.t1 MTR_4g069850 38.500 200 112 6 8 199 8 204 2.23e-38 131
MS.gene024151.t1 MTR_4g012940 37.811 201 114 5 8 200 8 205 4.89e-38 130
MS.gene024151.t1 MTR_3g064390 44.094 127 71 0 10 136 12 138 1.92e-34 120
MS.gene024151.t1 MTR_8g092020 38.554 166 95 3 8 166 12 177 7.28e-34 120
MS.gene024151.t1 MTR_1g097420 37.500 168 98 3 8 168 8 175 1.18e-33 119
MS.gene024151.t1 MTR_6g039490 36.310 168 100 3 8 168 8 175 1.64e-29 109
MS.gene024151.t1 MTR_1g097420 34.706 170 102 4 6 168 35 202 6.07e-28 105
MS.gene024151.t1 MTR_4g015220 55.844 77 34 0 124 200 4 80 1.19e-25 95.1
MS.gene024151.t1 MTR_3g107707 30.108 186 117 4 9 188 14 192 6.20e-23 92.0
MS.gene024151.t1 MTR_3g107717 30.108 186 117 4 9 188 14 192 6.40e-23 92.0
MS.gene024151.t1 MTR_3g107713 30.108 186 117 4 9 188 14 192 6.82e-23 92.0
MS.gene024151.t1 MTR_4g088055 33.136 169 99 6 8 164 6 172 1.23e-22 90.9
MS.gene024151.t1 MTR_4g073250 32.934 167 98 6 8 162 6 170 4.77e-22 89.4
MS.gene024151.t1 MTR_8g075240 33.136 169 99 6 8 164 6 172 6.62e-22 89.0
MS.gene024151.t1 MTR_6g087980 31.138 167 101 5 8 162 6 170 1.14e-21 88.6
MS.gene024151.t1 MTR_2g090875 30.769 169 103 5 8 164 6 172 1.80e-21 87.8
MS.gene024151.t1 MTR_3g078260 30.769 182 107 6 8 177 8 182 3.44e-21 87.4
MS.gene024151.t1 MTR_5g022600 32.544 169 100 6 8 164 6 172 3.62e-21 87.0
MS.gene024151.t1 MTR_8g031810 39.048 105 50 1 7 111 5 95 5.09e-20 81.3
MS.gene024151.t1 MTR_1g059590 34.682 173 103 4 5 177 395 557 6.11e-20 87.4
MS.gene024151.t1 MTR_1g059590 34.682 173 103 4 5 177 428 590 6.97e-20 87.4
MS.gene024151.t1 MTR_4g113620 30.000 170 97 5 9 173 14 166 1.83e-18 80.1
MS.gene024151.t1 MTR_3g078260 33.621 116 74 3 8 122 8 121 2.07e-17 75.9
MS.gene024151.t1 MTR_1452s0010 38.710 93 54 1 37 126 10 102 1.88e-16 72.0
MS.gene024151.t1 MTR_5g078090 34.375 160 87 6 9 159 20 170 1.71e-14 68.9
MS.gene024151.t1 MTR_1686s0010 40.000 70 42 0 37 106 10 79 1.06e-13 64.3
MS.gene024151.t1 MTR_5g015370 30.189 159 101 5 9 162 20 173 1.12e-11 61.2
MS.gene024151.t1 MTR_2g078000 43.548 62 30 1 69 130 46 102 2.43e-11 58.5
MS.gene024151.t1 MTR_1g069245 41.026 78 45 1 37 114 122 198 8.91e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024151.t1 AT1G02130 91.626 203 16 1 1 202 1 203 2.92e-141 392
MS.gene024151.t1 AT4G17530 87.129 202 26 0 1 202 1 202 4.03e-136 379
MS.gene024151.t1 AT5G47200 87.129 202 26 0 1 202 1 202 4.26e-135 377
MS.gene024151.t1 AT3G11730 75.369 203 47 2 1 200 1 203 5.36e-112 318
MS.gene024151.t1 AT5G59840 61.836 207 70 4 4 202 11 216 1.02e-87 257
MS.gene024151.t1 AT3G46060 60.870 207 72 4 4 202 11 216 2.82e-86 254
MS.gene024151.t1 AT3G46060 60.870 207 72 4 4 202 11 216 2.82e-86 254
MS.gene024151.t1 AT3G46060 60.870 207 72 4 4 202 11 216 2.82e-86 254
MS.gene024151.t1 AT3G53610 59.903 207 74 3 4 202 11 216 4.66e-86 253
MS.gene024151.t1 AT3G53610 59.903 207 74 3 4 202 11 216 4.66e-86 253
MS.gene024151.t1 AT3G53610 59.903 207 74 3 4 202 11 216 4.66e-86 253
MS.gene024151.t1 AT5G03520 61.951 205 70 3 4 201 11 214 1.25e-83 247
MS.gene024151.t1 AT3G09900 60.870 207 71 3 4 201 11 216 5.57e-83 245
MS.gene024151.t1 AT4G17160 48.039 204 96 2 5 200 3 204 1.29e-64 198
MS.gene024151.t1 AT5G03520 58.434 166 61 3 43 201 40 204 2.64e-63 195
MS.gene024151.t1 AT1G07410 45.238 210 107 2 1 202 5 214 4.13e-63 195
MS.gene024151.t1 AT4G35860 54.545 165 75 0 5 169 3 167 4.19e-63 195
MS.gene024151.t1 AT4G18430 49.048 210 97 2 2 201 7 216 1.91e-62 193
MS.gene024151.t1 AT4G17170 46.890 209 99 2 5 201 3 211 6.61e-62 192
MS.gene024151.t1 AT5G60860 47.867 211 100 1 2 202 7 217 8.60e-62 191
MS.gene024151.t1 AT1G09630 46.977 215 96 3 2 202 6 216 1.60e-61 191
MS.gene024151.t1 AT1G06400 46.190 210 104 2 2 202 7 216 2.98e-61 190
MS.gene024151.t1 AT3G46830 44.131 213 108 1 1 202 5 217 1.11e-60 189
MS.gene024151.t1 AT3G46830 44.131 213 108 1 1 202 5 217 1.11e-60 189
MS.gene024151.t1 AT3G07410 52.571 175 83 0 6 180 10 184 1.78e-60 188
MS.gene024151.t1 AT5G47520 47.143 210 98 2 6 202 12 221 3.51e-60 187
MS.gene024151.t1 AT3G15060 46.919 211 102 1 2 202 7 217 4.69e-60 187
MS.gene024151.t1 AT5G45750 47.596 208 100 2 4 202 9 216 9.74e-60 186
MS.gene024151.t1 AT1G16920 47.115 208 101 3 4 202 9 216 1.85e-59 186
MS.gene024151.t1 AT5G59150 42.254 213 112 1 1 202 5 217 2.77e-59 185
MS.gene024151.t1 AT1G28550 45.714 210 103 2 4 202 9 218 4.41e-59 185
MS.gene024151.t1 AT2G43130 46.569 204 101 3 6 201 10 213 5.23e-59 184
MS.gene024151.t1 AT2G33870 45.714 210 103 2 4 202 9 218 5.25e-59 184
MS.gene024151.t1 AT3G12160 44.811 212 103 3 2 200 9 219 1.67e-58 183
MS.gene024151.t1 AT4G39990 45.933 209 101 3 6 202 15 223 2.49e-58 183
MS.gene024151.t1 AT1G05810 46.154 208 101 2 6 202 10 217 2.52e-58 183
MS.gene024151.t1 AT5G47960 52.663 169 80 0 1 169 8 176 3.81e-58 182
MS.gene024151.t1 AT4G18800 47.087 206 102 2 4 202 9 214 4.05e-58 182
MS.gene024151.t1 AT1G05810 46.154 208 101 2 6 202 56 263 5.49e-58 183
MS.gene024151.t1 AT5G65270 44.340 212 103 3 6 202 15 226 1.77e-57 181
MS.gene024151.t1 AT1G43890 56.805 169 70 3 3 169 8 175 1.93e-57 180
MS.gene024151.t1 AT1G43890 56.805 169 70 3 3 169 8 175 1.93e-57 180
MS.gene024151.t1 AT1G43890 56.805 169 70 3 3 169 8 175 1.93e-57 180
MS.gene024151.t1 AT2G31680 49.714 175 88 0 6 180 10 184 6.22e-57 179
MS.gene024151.t1 AT5G03530 49.505 202 96 4 5 201 10 210 2.01e-56 177
MS.gene024151.t1 AT5G03530 49.505 202 96 4 5 201 10 210 2.01e-56 177
MS.gene024151.t1 AT1G73640 47.525 202 97 3 4 196 9 210 7.10e-56 177
MS.gene024151.t1 AT1G18200 50.857 175 86 0 2 176 7 181 3.39e-55 175
MS.gene024151.t1 AT4G19640 42.188 192 108 1 10 201 12 200 6.64e-49 158
MS.gene024151.t1 AT1G01200 42.786 201 112 2 1 198 21 221 7.45e-49 159
MS.gene024151.t1 AT5G45130 41.237 194 107 3 10 201 12 200 5.21e-46 150
MS.gene024151.t1 AT3G09910 48.066 181 90 4 5 183 10 188 5.97e-46 150
MS.gene024151.t1 AT3G09910 48.066 181 90 4 5 183 10 188 5.97e-46 150
MS.gene024151.t1 AT3G09910 45.320 203 99 5 5 202 10 205 7.91e-46 150
MS.gene024151.t1 AT3G09910 45.320 203 99 5 5 202 10 205 7.91e-46 150
MS.gene024151.t1 AT3G09910 45.320 203 99 5 5 202 10 205 7.91e-46 150
MS.gene024151.t1 AT5G45130 40.625 192 107 3 12 201 22 208 2.49e-44 147
MS.gene024151.t1 AT2G44610 37.879 198 118 1 9 201 10 207 3.10e-43 144
MS.gene024151.t1 AT4G35860 53.333 120 56 0 50 169 2 121 7.00e-43 142
MS.gene024151.t1 AT3G54840 44.805 154 84 1 10 162 35 188 1.22e-42 142
MS.gene024151.t1 AT3G54840 44.805 154 84 1 10 162 35 188 1.48e-42 142
MS.gene024151.t1 AT3G54840 44.444 153 84 1 11 162 2 154 2.58e-42 140
MS.gene024151.t1 AT2G22290 36.683 199 118 2 9 201 10 206 4.05e-41 139
MS.gene024151.t1 AT4G39890 40.741 162 95 1 9 169 10 171 9.84e-41 138
MS.gene024151.t1 AT5G10260 36.041 197 121 1 9 200 10 206 5.79e-40 135
MS.gene024151.t1 AT5G59150 39.024 164 89 1 50 202 3 166 1.00e-39 134
MS.gene024151.t1 AT5G64990 40.964 166 98 0 9 174 8 173 2.97e-39 134
MS.gene024151.t1 AT3G18820 39.000 200 111 5 8 199 8 204 3.28e-39 134
MS.gene024151.t1 AT1G52280 37.198 207 119 5 1 199 1 204 9.05e-39 132
MS.gene024151.t1 AT3G16100 37.500 200 114 5 8 199 8 204 2.66e-38 131
MS.gene024151.t1 AT1G49300 40.476 168 93 3 8 168 8 175 3.09e-37 129
MS.gene024151.t1 AT1G49300 40.476 168 93 3 8 168 8 175 3.09e-37 129
MS.gene024151.t1 AT5G64990 39.306 173 98 1 9 174 8 180 1.98e-36 127
MS.gene024151.t1 AT4G19640 45.038 131 72 0 10 140 12 142 2.50e-36 126
MS.gene024151.t1 AT2G21880 39.157 166 94 3 8 166 9 174 3.16e-36 126
MS.gene024151.t1 AT4G09720 36.683 199 119 3 8 199 8 206 1.11e-35 124
MS.gene024151.t1 AT4G19640 45.600 125 68 0 10 134 12 136 2.49e-35 122
MS.gene024151.t1 AT1G22740 34.804 204 111 5 8 199 8 201 7.73e-34 120
MS.gene024151.t1 AT4G09720 34.804 204 121 3 8 199 8 211 1.29e-33 119
MS.gene024151.t1 AT4G09720 33.810 210 121 3 8 199 8 217 1.26e-32 117
MS.gene024151.t1 AT5G39620 38.182 165 95 3 9 166 6 170 3.87e-30 110
MS.gene024151.t1 AT2G21880 40.146 137 75 3 37 166 13 149 3.36e-28 105
MS.gene024151.t1 AT2G21880 40.146 137 75 3 37 166 13 149 3.36e-28 105
MS.gene024151.t1 AT4G09720 37.059 170 100 3 37 199 3 172 5.80e-28 103
MS.gene024151.t1 AT4G09720 37.059 170 100 3 37 199 3 172 5.80e-28 103
MS.gene024151.t1 AT4G09720 37.059 170 100 3 37 199 3 172 5.80e-28 103
MS.gene024151.t1 AT2G21880 34.337 166 94 4 8 166 9 166 2.10e-26 100
MS.gene024151.t1 AT4G35020 34.320 169 97 6 8 164 6 172 6.09e-24 94.4
MS.gene024151.t1 AT4G35020 34.320 169 97 6 8 164 6 172 6.09e-24 94.4
MS.gene024151.t1 AT4G35020 34.320 169 97 6 8 164 6 172 6.09e-24 94.4
MS.gene024151.t1 AT5G55080 32.121 165 101 3 9 169 14 171 9.41e-24 94.4
MS.gene024151.t1 AT2G44690 32.934 167 98 5 8 162 18 182 3.70e-23 92.4
MS.gene024151.t1 AT3G51300 34.132 167 96 6 10 164 8 172 3.77e-23 92.0
MS.gene024151.t1 AT5G55190 29.891 184 120 4 9 188 14 192 1.45e-22 91.3
MS.gene024151.t1 AT2G17800 33.728 169 98 6 8 164 6 172 1.59e-22 90.5
MS.gene024151.t1 AT2G17800 33.728 169 98 6 8 164 6 172 1.59e-22 90.5
MS.gene024151.t1 AT5G20010 29.670 182 123 3 9 188 14 192 1.68e-22 90.9
MS.gene024151.t1 AT5G46025 42.056 107 61 1 70 175 6 112 2.79e-22 87.4
MS.gene024151.t1 AT5G20020 30.435 161 109 2 9 169 14 171 4.28e-22 90.1
MS.gene024151.t1 AT4G35950 33.136 169 99 6 8 164 6 172 4.94e-22 89.4
MS.gene024151.t1 AT4G28950 29.703 202 121 8 8 199 6 196 5.53e-22 89.4
MS.gene024151.t1 AT1G75840 31.361 169 102 5 8 164 6 172 5.72e-22 89.0
MS.gene024151.t1 AT5G45970 31.737 167 100 6 8 162 6 170 1.40e-21 88.2
MS.gene024151.t1 AT3G48040 30.769 169 103 5 8 164 8 174 1.14e-20 85.9
MS.gene024151.t1 AT1G20090 30.178 169 104 5 8 164 5 171 2.18e-20 84.7
MS.gene024151.t1 AT3G48040 34.146 123 78 3 8 129 8 128 1.65e-19 82.0
MS.gene024151.t1 AT5G62880 29.940 167 103 5 8 162 8 172 5.91e-19 81.6
MS.gene024151.t1 AT5G62880 33.333 123 79 3 8 129 8 128 1.61e-18 79.7
MS.gene024151.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.63e-18 78.2
MS.gene024151.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.63e-18 78.2
MS.gene024151.t1 AT3G49870 35.366 164 86 7 9 162 1 154 1.34e-14 68.9
MS.gene024151.t1 AT3G49870 35.366 164 86 7 9 162 20 173 3.96e-14 68.2
MS.gene024151.t1 AT5G67560 35.366 164 86 7 9 162 20 173 6.57e-14 67.4
MS.gene024151.t1 AT3G51290 33.803 142 80 6 35 164 634 773 1.17e-13 69.3
MS.gene024151.t1 AT5G37680 32.500 160 90 6 9 159 20 170 3.14e-13 65.5
MS.gene024151.t1 AT2G15310 31.731 104 63 4 10 113 19 114 6.20e-11 59.7

Find 42 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGTCGAACAGGCATTTA+TGG 0.216366 7.1:-22838226 MS.gene024151:CDS
TTTGCACTTGTCTCCATAAA+AGG 0.231314 7.1:+22838258 None:intergenic
CAGGCATTTGCAGATGAAAT+AGG 0.278594 7.1:-22838285 MS.gene024151:CDS
CAGCTGGGCAAGAACGATTT+AGG 0.305104 7.1:-22838756 MS.gene024151:CDS
ACATACGATTTGGAGCTTAA+TGG 0.308951 7.1:+22838982 None:intergenic
GGAGGCCTTGCATTGTTTGT+AGG 0.364796 7.1:+22837392 None:intergenic
AAGTGAGGAACATACTATTC+AGG 0.384451 7.1:+22840670 None:intergenic
ATATGAGTACCTATCCTTGA+TGG 0.396903 7.1:+22838191 None:intergenic
GAAAATCCGCACAGTTGAAC+AGG 0.426213 7.1:-22839014 MS.gene024151:CDS
CCCCTTATCTGCACTGTTGG+AGG 0.429950 7.1:+22837374 None:intergenic
GGCCTCCAACAGTGCAGATA+AGG 0.443333 7.1:-22837376 MS.gene024151:CDS
GCCTTGCATTGTTTGTAGGT+TGG 0.450220 7.1:+22837396 None:intergenic
GCCTCCAACAGTGCAGATAA+GGG 0.451383 7.1:-22837375 MS.gene024151:CDS
GGATTCTACAAATGTCGAAC+AGG 0.469392 7.1:-22838235 MS.gene024151:CDS
GGCAATGGCTTCTTCCATCA+AGG 0.481447 7.1:-22838205 MS.gene024151:CDS
TTGATTGGAGACTCTGGTGT+TGG 0.492888 7.1:-22840091 MS.gene024151:CDS
AATGTTAACAAGCTCTTGGT+TGG 0.494106 7.1:-22838516 MS.gene024151:CDS
TGATAATGTTAACAAGCTCT+TGG 0.495654 7.1:-22838520 MS.gene024151:CDS
AGCTACTACCGTGGGGCACA+TGG 0.500719 7.1:-22838721 MS.gene024151:CDS
TGTCCCCTTATCTGCACTGT+TGG 0.505248 7.1:+22837371 None:intergenic
CATATGTAGTGGGATACAGC+TGG 0.519499 7.1:-22838772 MS.gene024151:intron
CAGCCAGTTGGCCAGAAAAG+TGG 0.520499 7.1:-22837350 MS.gene024151:CDS
CGAACAGGCATTTATGGCAA+TGG 0.532623 7.1:-22838220 MS.gene024151:CDS
TGCCCCACGGTAGTAGCTAC+TGG 0.542749 7.1:+22838726 None:intergenic
GACAGCTACATAAGCACCAT+TGG 0.547410 7.1:-22839129 MS.gene024151:CDS
AGCCAGTTGGCCAGAAAAGT+GGG 0.560192 7.1:-22837349 MS.gene024151:CDS
CAGATAAGGGGACAGCCAGT+TGG 0.562181 7.1:-22837362 MS.gene024151:CDS
ATCCGCACAGTTGAACAGGA+TGG 0.566980 7.1:-22839010 MS.gene024151:CDS
TCCGCACAGTTGAACAGGAT+GGG 0.571363 7.1:-22839009 MS.gene024151:CDS
TTACAGCAAATCTGAGCAGA+AGG 0.577201 7.1:+22840059 None:intergenic
TCCCATCCTGTTCAACTGTG+CGG 0.594596 7.1:+22839008 None:intergenic
GCCAACCTACAAACAATGCA+AGG 0.594963 7.1:-22837397 MS.gene024151:CDS
TGGCTTCTTCCATCAAGGAT+AGG 0.595319 7.1:-22838200 MS.gene024151:intron
ACTTACAAAATCAACTCCAA+TGG 0.612564 7.1:+22839113 None:intergenic
ATATGTAGTGGGATACAGCT+GGG 0.616758 7.1:-22838771 MS.gene024151:intron
GCTTCAATAATGTGAAGCAA+TGG 0.626631 7.1:-22838569 MS.gene024151:CDS
CCTCCAACAGTGCAGATAAG+GGG 0.629255 7.1:-22837374 MS.gene024151:CDS
TCACCAGTAGCTACTACCGT+GGG 0.632543 7.1:-22838729 MS.gene024151:CDS
CAATGATTCCATGTGCCCCA+CGG 0.637566 7.1:+22838713 None:intergenic
ATCACCAGTAGCTACTACCG+TGG 0.643184 7.1:-22838730 MS.gene024151:CDS
TAACATTATCACTAGCATAG+CGG 0.731455 7.1:+22838532 None:intergenic
CACCAGTAGCTACTACCGTG+GGG 0.776894 7.1:-22838728 MS.gene024151:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAATAAAAATGCA+AGG + chr7.1:22839592-22839611 None:intergenic 10.0%
!! AAATAAAAATAAAAATGCAA+GGG + chr7.1:22839591-22839610 None:intergenic 10.0%
!! ATTCAATTATTTATAAACAA+TGG - chr7.1:22838434-22838453 MS.gene024151:intron 10.0%
!! AAAAATTAAGACTTTACAAT+TGG - chr7.1:22837759-22837778 MS.gene024151:intron 15.0%
!! AAAATTAAGACTTTACAATT+GGG - chr7.1:22837760-22837779 MS.gene024151:intron 15.0%
!! AACAATAATTAATGTTGTAT+TGG - chr7.1:22838320-22838339 MS.gene024151:intron 15.0%
!! AACATATATAATTCAATCTA+GGG + chr7.1:22837551-22837570 None:intergenic 15.0%
!! AATAAAAATAAAAATGCAAG+GGG + chr7.1:22839590-22839609 None:intergenic 15.0%
!! AATGAGATAATAAATAGTTT+AGG + chr7.1:22838264-22838283 None:intergenic 15.0%
!! AGAAAAACATAATATAGATA+AGG + chr7.1:22839701-22839720 None:intergenic 15.0%
!! ATGAGATAATAAATAGTTTA+GGG + chr7.1:22838263-22838282 None:intergenic 15.0%
!! ATTACTTTAATTAAAAGACT+TGG - chr7.1:22840429-22840448 MS.gene024151:intron 15.0%
!! TAACATATATAATTCAATCT+AGG + chr7.1:22837552-22837571 None:intergenic 15.0%
!! TTGAATTATATATGTTAATC+AGG - chr7.1:22837555-22837574 MS.gene024151:intron 15.0%
!!! AACTTTTTTTTTAATCTTGT+TGG - chr7.1:22839114-22839133 MS.gene024151:intron 15.0%
!!! ATATTATGTTTTTCTTTAAC+AGG - chr7.1:22839706-22839725 MS.gene024151:intron 15.0%
!!! ATTAATTATTGTTTTGTCTT+GGG + chr7.1:22838313-22838332 None:intergenic 15.0%
!!! TTTATAGTTTTAGAATTACA+TGG - chr7.1:22837620-22837639 MS.gene024151:intron 15.0%
!! ACAACATTAAACTATAGTAT+CGG + chr7.1:22838039-22838058 None:intergenic 20.0%
!! AGAAAATAAAAAACGAATCA+AGG + chr7.1:22837385-22837404 None:intergenic 20.0%
!! AGGAAGAAAAAAAACAATTT+AGG + chr7.1:22837518-22837537 None:intergenic 20.0%
!! GAAAAGTTGTTTACTTTAAA+AGG - chr7.1:22840494-22840513 MS.gene024151:intron 20.0%
!! GGAAGAAAAAAAACAATTTA+GGG + chr7.1:22837517-22837536 None:intergenic 20.0%
!! TACTATAGTTTAATGTTGTA+TGG - chr7.1:22838040-22838059 MS.gene024151:intron 20.0%
!! TTTGAAAACAACAAGTTAAT+AGG - chr7.1:22838345-22838364 MS.gene024151:intron 20.0%
!!! ATTTTTTCTTGAATGTAGAA+TGG - chr7.1:22840587-22840606 MS.gene024151:intron 20.0%
!!! CATTAATTATTGTTTTGTCT+TGG + chr7.1:22838314-22838333 None:intergenic 20.0%
!!! TAATTAAAAGACTTGGTTTT+AGG - chr7.1:22840436-22840455 MS.gene024151:intron 20.0%
!!! TAATTTGGTTTATATAAGCT+GGG - chr7.1:22837459-22837478 MS.gene024151:intron 20.0%
!!! TTAAAAAGAAGTATGTGTTT+TGG - chr7.1:22838692-22838711 MS.gene024151:intron 20.0%
!!! TTAAACAAATTTTACCTAGA+AGG - chr7.1:22840216-22840235 MS.gene024151:intron 20.0%
!!! TTAATTATTGTTTTGTCTTG+GGG + chr7.1:22838312-22838331 None:intergenic 20.0%
!!! TTAATTTGGTTTATATAAGC+TGG - chr7.1:22837458-22837477 MS.gene024151:intron 20.0%
!!! TTTCATGTTTTCTCTTAAAA+GGG - chr7.1:22837429-22837448 MS.gene024151:intron 20.0%
!!! TTTTCATGTTTTCTCTTAAA+AGG - chr7.1:22837428-22837447 MS.gene024151:intron 20.0%
! AAACATGAAAAACACGAAAA+AGG + chr7.1:22837419-22837438 None:intergenic 25.0%
! AATAAATCAATAGTTGTGCT+TGG - chr7.1:22838501-22838520 MS.gene024151:CDS 25.0%
! AATTAACTCAAGTGGAAATA+AGG + chr7.1:22838083-22838102 None:intergenic 25.0%
! ACAACAATAACTAAAAGGAA+CGG + chr7.1:22838174-22838193 None:intergenic 25.0%
! ACAATCATATACATACGATT+TGG + chr7.1:22839041-22839060 None:intergenic 25.0%
! ACATCTCTTATAAATCAACA+AGG + chr7.1:22837667-22837686 None:intergenic 25.0%
! ATGTGACTAGTAAAAATGAA+CGG - chr7.1:22838386-22838405 MS.gene024151:intron 25.0%
! ATTTATTATCTCATTCCACA+TGG - chr7.1:22838269-22838288 MS.gene024151:CDS 25.0%
! CAAAAAAATACCATGTAGTT+TGG - chr7.1:22840114-22840133 MS.gene024151:CDS 25.0%
! CATCTCTTATAAATCAACAA+GGG + chr7.1:22837666-22837685 None:intergenic 25.0%
! CTTTACTTTGAACTAGAAAA+TGG - chr7.1:22838601-22838620 MS.gene024151:intron 25.0%
! GATAAAACAATTAACTCAAG+TGG + chr7.1:22838091-22838110 None:intergenic 25.0%
! TAAGTCATTCATATTAAGCA+TGG + chr7.1:22840066-22840085 None:intergenic 25.0%
! TAAGTTTACAACTCAAAAGA+AGG - chr7.1:22839915-22839934 MS.gene024151:intron 25.0%
! TTTAGGCTTAGATATACATT+TGG - chr7.1:22840453-22840472 MS.gene024151:intron 25.0%
! TTTATATTTCCTGACTTTGT+TGG - chr7.1:22839351-22839370 MS.gene024151:intron 25.0%
!! ATGATTTTCGGTAAATTCTT+AGG + chr7.1:22840270-22840289 None:intergenic 25.0%
!! TGTTGTATGGTTTTCATTTT+CGG - chr7.1:22838053-22838072 MS.gene024151:intron 25.0%
!! TGTTTTCATGTTGATATATG+TGG - chr7.1:22837792-22837811 MS.gene024151:intron 25.0%
!!! TAATTATTGTTTTGTCTTGG+GGG + chr7.1:22838311-22838330 None:intergenic 25.0%
!!! TCCTTTTAGTTATTGTTGTA+GGG - chr7.1:22838175-22838194 MS.gene024151:intron 25.0%
!!! TTCCTTTTAGTTATTGTTGT+AGG - chr7.1:22838174-22838193 MS.gene024151:intron 25.0%
AAAATACCATGTAGTTTGGT+TGG - chr7.1:22840118-22840137 MS.gene024151:intron 30.0%
AAAGGCTTCTAATTGTTACT+TGG + chr7.1:22838118-22838137 None:intergenic 30.0%
AAATACCATGTAGTTTGGTT+GGG - chr7.1:22840119-22840138 MS.gene024151:intron 30.0%
AAATGAACGGATGTAGTAAT+TGG - chr7.1:22838399-22838418 MS.gene024151:intron 30.0%
AAATGACTCTAAGCTAAAGA+AGG + chr7.1:22839964-22839983 None:intergenic 30.0%
AAGTAACAATTAGAAGCCTT+TGG - chr7.1:22838117-22838136 MS.gene024151:intron 30.0%
ACCCTACAACAATAACTAAA+AGG + chr7.1:22838179-22838198 None:intergenic 30.0%
ACTTACAAAATCAACTCCAA+TGG + chr7.1:22838900-22838919 None:intergenic 30.0%
AGTAACAATTAGAAGCCTTT+GGG - chr7.1:22838118-22838137 MS.gene024151:intron 30.0%
ATAAAATGACAGTCCTTTCA+AGG + chr7.1:22840405-22840424 None:intergenic 30.0%
CATCAGAATTTGATCTTAGA+GGG + chr7.1:22840564-22840583 None:intergenic 30.0%
CATGAAAACTCAAAAACACA+AGG + chr7.1:22837594-22837613 None:intergenic 30.0%
CCAACCTAAAAAAGGTAAAA+TGG - chr7.1:22838752-22838771 MS.gene024151:CDS 30.0%
CTACCTGTTTAATTCTTTGT+TGG - chr7.1:22838457-22838476 MS.gene024151:intron 30.0%
GATAGTTACCAACCTAAAAA+AGG - chr7.1:22838744-22838763 MS.gene024151:CDS 30.0%
GATCCAATTTCATATGTAGT+GGG - chr7.1:22839228-22839247 MS.gene024151:intron 30.0%
GATGAACAGTTAAATATGCT+TGG - chr7.1:22839867-22839886 MS.gene024151:intron 30.0%
TAACATTATCACTAGCATAG+CGG + chr7.1:22839481-22839500 None:intergenic 30.0%
TAGATAAGGATAGCTGAAAT+AGG + chr7.1:22839687-22839706 None:intergenic 30.0%
TATCCCACTACATATGAAAT+TGG + chr7.1:22839234-22839253 None:intergenic 30.0%
TCATCAGAATTTGATCTTAG+AGG + chr7.1:22840565-22840584 None:intergenic 30.0%
TGATCCAATTTCATATGTAG+TGG - chr7.1:22839227-22839246 MS.gene024151:intron 30.0%
TGTTGATATATGTGGAGATA+TGG - chr7.1:22837800-22837819 MS.gene024151:intron 30.0%
TTAATCAGACATTCTCCATA+AGG + chr7.1:22838627-22838646 None:intergenic 30.0%
TTATGTTGGATACTCTTGTT+TGG - chr7.1:22838005-22838024 MS.gene024151:intron 30.0%
! AAGGCTTCTAATTGTTACTT+GGG + chr7.1:22838117-22838136 None:intergenic 30.0%
! ACAACTTTTCATTGAACATC+AGG + chr7.1:22840484-22840503 None:intergenic 30.0%
! ATGTTTTCTCTTAAAAGGGT+TGG - chr7.1:22837433-22837452 MS.gene024151:intron 30.0%
! CAATCTAGGGTTAAAATTTC+AGG + chr7.1:22837538-22837557 None:intergenic 30.0%
! CTGTTTAAGCTTCTTTTGAT+TGG - chr7.1:22837904-22837923 MS.gene024151:intron 30.0%
! TGAAATAGGCATACCTTTTA+TGG - chr7.1:22839739-22839758 MS.gene024151:intron 30.0%
! TGATAATGTTAACAAGCTCT+TGG - chr7.1:22839490-22839509 MS.gene024151:intron 30.0%
!! AACGTTAAGTTTTATGCTAC+AGG - chr7.1:22838844-22838863 MS.gene024151:intron 30.0%
!! AATTATTGTTTTGTCTTGGG+GGG + chr7.1:22838310-22838329 None:intergenic 30.0%
!! CTGCTTGTTGTTTATTATGT+TGG - chr7.1:22837991-22838010 MS.gene024151:intron 30.0%
!! GAAGCCATTTTACCTTTTTT+AGG + chr7.1:22838759-22838778 None:intergenic 30.0%
!! TAAAAGGGTTGGTGTTAATT+TGG - chr7.1:22837444-22837463 MS.gene024151:intron 30.0%
!!! CCATTTTACCTTTTTTAGGT+TGG + chr7.1:22838755-22838774 None:intergenic 30.0%
!!! GCAATGAGATTTTGGAATTT+TGG + chr7.1:22840331-22840350 None:intergenic 30.0%
!!! TTATGCCTTTTAGTTTTCCT+TGG - chr7.1:22839984-22840003 MS.gene024151:intron 30.0%
AAATGTCGAACAGGCATTTA+TGG - chr7.1:22839784-22839803 MS.gene024151:intron 35.0%
AAGCATGGTCTAGATTTGAT+TGG + chr7.1:22840051-22840070 None:intergenic 35.0%
AAGCTAAAGAAGGTTGGAAT+GGG + chr7.1:22839954-22839973 None:intergenic 35.0%
AAGTGAGGAACATACTATTC+AGG + chr7.1:22837343-22837362 None:intergenic 35.0%
AATGGCTTCACTTTGTATGT+TGG - chr7.1:22838770-22838789 MS.gene024151:intron 35.0%
AATGTTAACAAGCTCTTGGT+TGG - chr7.1:22839494-22839513 MS.gene024151:intron 35.0%
ACTTTCAACAATATCCCGAA+AGG + chr7.1:22838555-22838574 None:intergenic 35.0%
ATATGAGTACCTATCCTTGA+TGG + chr7.1:22839822-22839841 None:intergenic 35.0%
ATGGTCTAGATTTGATTGGA+TGG + chr7.1:22840047-22840066 None:intergenic 35.0%
CAATAACTAAAAGGAACGGA+TGG + chr7.1:22838170-22838189 None:intergenic 35.0%
CCTCCAACAAAGAATTAAAC+AGG + chr7.1:22838463-22838482 None:intergenic 35.0%
CCTGTTTAATTCTTTGTTGG+AGG - chr7.1:22838460-22838479 MS.gene024151:intron 35.0%
GATAAGAAACAATGTCAACG+TGG + chr7.1:22839201-22839220 None:intergenic 35.0%
GCTTCAATAATGTGAAGCAA+TGG - chr7.1:22839441-22839460 MS.gene024151:intron 35.0%
GCTTTACTAACTGGTTATTC+TGG - chr7.1:22839387-22839406 MS.gene024151:intron 35.0%
GGATATTGTTGAAAGTGATG+AGG - chr7.1:22838559-22838578 MS.gene024151:CDS 35.0%
GGTTTCCAAAATGATTTCCT+CGG + chr7.1:22840310-22840329 None:intergenic 35.0%
TAAGCTAAAGAAGGTTGGAA+TGG + chr7.1:22839955-22839974 None:intergenic 35.0%
TACCGAAAATCATAGTCACA+TGG - chr7.1:22840277-22840296 MS.gene024151:intron 35.0%
TGGTCTAGATTTGATTGGAT+GGG + chr7.1:22840046-22840065 None:intergenic 35.0%
TTCAAAGTAAAGCTCACAAC+AGG + chr7.1:22838593-22838612 None:intergenic 35.0%
TTTGCACTTGTCTCCATAAA+AGG + chr7.1:22839755-22839774 None:intergenic 35.0%
! AAGAATGGGCAATGAGATTT+TGG + chr7.1:22840339-22840358 None:intergenic 35.0%
! ACATACGATTTGGAGCTTAA+TGG + chr7.1:22839031-22839050 None:intergenic 35.0%
! ATGACACGACATTGATTGAT+TGG + chr7.1:22840159-22840178 None:intergenic 35.0%
! CTTTGTATGTTGGTTGATCT+TGG - chr7.1:22838780-22838799 MS.gene024151:intron 35.0%
! TGAACTAGAAAATGGCCTTA+TGG - chr7.1:22838609-22838628 MS.gene024151:intron 35.0%
! TTTTATGGAGACAAGTGCAA+AGG - chr7.1:22839754-22839773 MS.gene024151:intron 35.0%
!! TTTGCTCTAACTTGCTTAGA+AGG + chr7.1:22839893-22839912 None:intergenic 35.0%
!!! AAAGAAGTATGTGTTTTGGC+TGG - chr7.1:22838696-22838715 MS.gene024151:intron 35.0%
!!! GGTATTTTTTTGCCTCACTT+AGG + chr7.1:22840106-22840125 None:intergenic 35.0%
AAGGAAAGACCAACAAAGTC+AGG + chr7.1:22839363-22839382 None:intergenic 40.0%
AATGACTTAGAGCCATACAG+AGG - chr7.1:22840077-22840096 MS.gene024151:CDS 40.0%
ACATACCCAACCAAACTACA+TGG + chr7.1:22840127-22840146 None:intergenic 40.0%
ACCAGTTAGTAAAGCATGCA+AGG + chr7.1:22839382-22839401 None:intergenic 40.0%
AGAGAGAGAGAAATACCATG+TGG + chr7.1:22838287-22838306 None:intergenic 40.0%
AGGGTAATCATCACCTTGAA+AGG - chr7.1:22840389-22840408 MS.gene024151:intron 40.0%
ATACAGAGGATACCTAAGTG+AGG - chr7.1:22840091-22840110 MS.gene024151:CDS 40.0%
ATGCAAGCACAAGCTTGAAA+TGG + chr7.1:22839633-22839652 None:intergenic 40.0%
CAGGCATTTGCAGATGAAAT+AGG - chr7.1:22839725-22839744 MS.gene024151:intron 40.0%
CGAATCAAGGAAAATCGAGA+AGG + chr7.1:22837372-22837391 None:intergenic 40.0%
CGGTAAATTCTTAGGTACCA+TGG + chr7.1:22840262-22840281 None:intergenic 40.0%
CTTGGAACTTTATGAGGTTG+GGG - chr7.1:22838519-22838538 MS.gene024151:CDS 40.0%
GACTCTAAGCTAAAGAAGGT+TGG + chr7.1:22839960-22839979 None:intergenic 40.0%
GCAGCAGATCAAGAAAGAAT+GGG + chr7.1:22840353-22840372 None:intergenic 40.0%
GCTTGGAACTTTATGAGGTT+GGG - chr7.1:22838518-22838537 MS.gene024151:CDS 40.0%
GGAATCATTGTGCGTAATGA+TGG - chr7.1:22839310-22839329 MS.gene024151:intron 40.0%
GGATTCTACAAATGTCGAAC+AGG - chr7.1:22839775-22839794 MS.gene024151:intron 40.0%
GTGATAGAGCTGATGTGTTA+TGG - chr7.1:22837861-22837880 MS.gene024151:intron 40.0%
GTTGTGCTTGGAACTTTATG+AGG - chr7.1:22838513-22838532 MS.gene024151:CDS 40.0%
TCACTTAGGTATCCTCTGTA+TGG + chr7.1:22840092-22840111 None:intergenic 40.0%
TCCAAAATGATTTCCTCGGT+CGG + chr7.1:22840306-22840325 None:intergenic 40.0%
TCCTTGCATGCTTTACTAAC+TGG - chr7.1:22839378-22839397 MS.gene024151:intron 40.0%
TCGAGAAGGAATAGAAAGTG+AGG + chr7.1:22837358-22837377 None:intergenic 40.0%
TGCAGCAGATCAAGAAAGAA+TGG + chr7.1:22840354-22840373 None:intergenic 40.0%
TGCTTGGAACTTTATGAGGT+TGG - chr7.1:22838517-22838536 MS.gene024151:CDS 40.0%
TTACAGCAAATCTGAGCAGA+AGG + chr7.1:22837954-22837973 None:intergenic 40.0%
TTCTTAGGTACCATGGAGTT+TGG + chr7.1:22840255-22840274 None:intergenic 40.0%
TTGGAACTTTATGAGGTTGG+GGG - chr7.1:22838520-22838539 MS.gene024151:CDS 40.0%
! AAATTGACTTATCCCAGCCA+AGG + chr7.1:22840004-22840023 None:intergenic 40.0%
! ACATTGATTGATTGGACGAG+GGG + chr7.1:22840151-22840170 None:intergenic 40.0%
! ATATGTAGTGGGATACAGCT+GGG - chr7.1:22839239-22839258 MS.gene024151:intron 40.0%
! CACTAACTTCTTTTCGTTGC+TGG - chr7.1:22840530-22840549 MS.gene024151:intron 40.0%
! GACATTGATTGATTGGACGA+GGG + chr7.1:22840152-22840171 None:intergenic 40.0%
! GCTGGGATAAGTCAATTTTG+AGG - chr7.1:22840006-22840025 MS.gene024151:intron 40.0%
! GGCCATGTGACTATGATTTT+CGG + chr7.1:22840282-22840301 None:intergenic 40.0%
! TGGAGGTTTTTGTGTAGTTC+TGG - chr7.1:22838477-22838496 MS.gene024151:CDS 40.0%
!! CTTCTTTTGATTGGAGACTC+TGG - chr7.1:22837913-22837932 MS.gene024151:intron 40.0%
!!! CCTTTTAGTTTTCCTTGGCT+GGG - chr7.1:22839989-22840008 MS.gene024151:intron 40.0%
AAAATGATTTCCTCGGTCGG+TGG + chr7.1:22840303-22840322 None:intergenic 45.0%
AGGTACCATGGAGTTTGGTT+GGG + chr7.1:22840250-22840269 None:intergenic 45.0%
CCCAGCCAAGGAAAACTAAA+AGG + chr7.1:22839992-22840011 None:intergenic 45.0%
CGAACAGGCATTTATGGCAA+TGG - chr7.1:22839790-22839809 MS.gene024151:intron 45.0%
GAAAATCCGCACAGTTGAAC+AGG - chr7.1:22838996-22839015 MS.gene024151:CDS 45.0%
GACAGCTACATAAGCACCAT+TGG - chr7.1:22838881-22838900 MS.gene024151:intron 45.0%
GCCAACCTACAAACAATGCA+AGG - chr7.1:22840613-22840632 MS.gene024151:intron 45.0%
GCCTTGCATTGTTTGTAGGT+TGG + chr7.1:22840617-22840636 None:intergenic 45.0%
GTTGGGTATCAGTACCTTCT+AGG + chr7.1:22840233-22840252 None:intergenic 45.0%
TAGGTACCATGGAGTTTGGT+TGG + chr7.1:22840251-22840270 None:intergenic 45.0%
TGATACCCAACCAAACTCCA+TGG - chr7.1:22840242-22840261 MS.gene024151:intron 45.0%
TGGAACTTTATGAGGTTGGG+GGG - chr7.1:22838521-22838540 MS.gene024151:CDS 45.0%
TGGCTTCTTCCATCAAGGAT+AGG - chr7.1:22839810-22839829 MS.gene024151:intron 45.0%
TGGGGGGAGATAAAACCTTT+CGG - chr7.1:22838537-22838556 MS.gene024151:CDS 45.0%
TGGTTCGTGGAGATGATATG+TGG - chr7.1:22838800-22838819 MS.gene024151:intron 45.0%
TTGATTGGAGACTCTGGTGT+TGG - chr7.1:22837919-22837938 MS.gene024151:intron 45.0%
! ACCGACCGAGGAAATCATTT+TGG - chr7.1:22840302-22840321 MS.gene024151:intron 45.0%
! CATATGTAGTGGGATACAGC+TGG - chr7.1:22839238-22839257 MS.gene024151:intron 45.0%
! CGACATTGATTGATTGGACG+AGG + chr7.1:22840153-22840172 None:intergenic 45.0%
! TGTTGGTTGATCTTGGTTCG+TGG - chr7.1:22838787-22838806 MS.gene024151:intron 45.0%
!!! GCCTTTTAGTTTTCCTTGGC+TGG - chr7.1:22839988-22840007 MS.gene024151:intron 45.0%
AACCAGTGCAACACACCCAA+AGG + chr7.1:22838136-22838155 None:intergenic 50.0%
AGCCAGTTGGCCAGAAAAGT+GGG - chr7.1:22840661-22840680 MS.gene024151:intron 50.0%
ATCACCAGTAGCTACTACCG+TGG - chr7.1:22839280-22839299 MS.gene024151:intron 50.0%
ATCCGCACAGTTGAACAGGA+TGG - chr7.1:22839000-22839019 MS.gene024151:CDS 50.0%
CAAGGTGATGATTACCCTGC+TGG + chr7.1:22840387-22840406 None:intergenic 50.0%
CAATGATTCCATGTGCCCCA+CGG + chr7.1:22839300-22839319 None:intergenic 50.0%
CAGCTGGGCAAGAACGATTT+AGG - chr7.1:22839254-22839273 MS.gene024151:intron 50.0%
CCTCCAACAGTGCAGATAAG+GGG - chr7.1:22840636-22840655 MS.gene024151:intron 50.0%
GCCTCCAACAGTGCAGATAA+GGG - chr7.1:22840635-22840654 MS.gene024151:intron 50.0%
GGAGGCCTTGCATTGTTTGT+AGG + chr7.1:22840621-22840640 None:intergenic 50.0%
GGCAATGGCTTCTTCCATCA+AGG - chr7.1:22839805-22839824 MS.gene024151:intron 50.0%
GGGGGGAGATAAAACCTTTC+GGG - chr7.1:22838538-22838557 MS.gene024151:CDS 50.0%
TCACCAGTAGCTACTACCGT+GGG - chr7.1:22839281-22839300 MS.gene024151:intron 50.0%
TCCCATCCTGTTCAACTGTG+CGG + chr7.1:22839005-22839024 None:intergenic 50.0%
TCCGCACAGTTGAACAGGAT+GGG - chr7.1:22839001-22839020 MS.gene024151:CDS 50.0%
TGTCCCCTTATCTGCACTGT+TGG + chr7.1:22840642-22840661 None:intergenic 50.0%
! GTGCTTGCATAGTGCTGTTG+AGG - chr7.1:22839643-22839662 MS.gene024151:intron 50.0%
!! ATGAGCAGCACCCACTTTTC+TGG + chr7.1:22840674-22840693 None:intergenic 50.0%
AGCCTTTGGGTGTGTTGCAC+TGG - chr7.1:22838131-22838150 MS.gene024151:intron 55.0%
CACCAGTAGCTACTACCGTG+GGG - chr7.1:22839282-22839301 MS.gene024151:intron 55.0%
CAGATAAGGGGACAGCCAGT+TGG - chr7.1:22840648-22840667 MS.gene024151:intron 55.0%
CAGCCAGTTGGCCAGAAAAG+TGG - chr7.1:22840660-22840679 MS.gene024151:intron 55.0%
CCCCTTATCTGCACTGTTGG+AGG + chr7.1:22840639-22840658 None:intergenic 55.0%
GGCCTCCAACAGTGCAGATA+AGG - chr7.1:22840634-22840653 MS.gene024151:intron 55.0%
!! CACCCACTTTTCTGGCCAAC+TGG + chr7.1:22840666-22840685 None:intergenic 55.0%
AGCTACTACCGTGGGGCACA+TGG - chr7.1:22839289-22839308 MS.gene024151:intron 60.0%
TGCACAGCTCGCAACCAGCA+GGG - chr7.1:22840370-22840389 MS.gene024151:intron 60.0%
TGCCCCACGGTAGTAGCTAC+TGG + chr7.1:22839287-22839306 None:intergenic 60.0%
AGTCACATGGCCACCGACCG+AGG - chr7.1:22840290-22840309 MS.gene024151:intron 65.0%
CTGCACAGCTCGCAACCAGC+AGG - chr7.1:22840369-22840388 MS.gene024151:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 22837334 22840698 22837334 ID=MS.gene024151
chr7.1 mRNA 22837334 22840698 22837334 ID=MS.gene024151.t1;Parent=MS.gene024151
chr7.1 exon 22840685 22840698 22840685 ID=MS.gene024151.t1.exon1;Parent=MS.gene024151.t1
chr7.1 CDS 22840685 22840698 22840685 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
chr7.1 exon 22840063 22840135 22840063 ID=MS.gene024151.t1.exon2;Parent=MS.gene024151.t1
chr7.1 CDS 22840063 22840135 22840063 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
chr7.1 exon 22839119 22839166 22839119 ID=MS.gene024151.t1.exon3;Parent=MS.gene024151.t1
chr7.1 CDS 22839119 22839166 22839119 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
chr7.1 exon 22838988 22839035 22838988 ID=MS.gene024151.t1.exon4;Parent=MS.gene024151.t1
chr7.1 CDS 22838988 22839035 22838988 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
chr7.1 exon 22838714 22838785 22838714 ID=MS.gene024151.t1.exon5;Parent=MS.gene024151.t1
chr7.1 CDS 22838714 22838785 22838714 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
chr7.1 exon 22838464 22838619 22838464 ID=MS.gene024151.t1.exon6;Parent=MS.gene024151.t1
chr7.1 CDS 22838464 22838619 22838464 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
chr7.1 exon 22838201 22838304 22838201 ID=MS.gene024151.t1.exon7;Parent=MS.gene024151.t1
chr7.1 CDS 22838201 22838304 22838201 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
chr7.1 exon 22837334 22837427 22837334 ID=MS.gene024151.t1.exon8;Parent=MS.gene024151.t1
chr7.1 CDS 22837334 22837427 22837334 ID=cds.MS.gene024151.t1;Parent=MS.gene024151.t1
Gene Sequence

>MS.gene024151

ATGAATCCTGAATAGTATGTTCCTCACTTTCTATTCCTTCTCGATTTTCCTTGATTCGTTTTTTATTTTCTGAAATTTCGTTCCTTTTTCGTGTTTTTCATGTTTTCTCTTAAAAGGGTTGGTGTTAATTTGGTTTATATAAGCTGGGTTATGTTAATTTCAATTTTTGTTGTTTTCTAACCCTAAATTGTTTTTTTTCTTCCTGAAATTTTAACCCTAGATTGAATTATATATGTTAATCAGGATTCAACTGTGATCCTTGTGTTTTTGAGTTTTCATGATTGATTTTATAGTTTTAGAATTACATGGAATCTGATCTTGTTAGTGATCCCTTGTTGATTTATAAGAGATGTTTGAGTTTGTAATTCAATCAATAAGATAAAATTTTGATGCTTGTGTTGCTTTTGTTTATAGATCTTTGAAAAAAAAATTAAGACTTTACAATTGGGTTTTTTATTTGTTTTCATGTTGATATATGTGGAGATATGGTTAATTTAGATGCTGATTCACAATCTATTTTTGTTGAAGTGATAGAGCTGATGTGTTATGGTTATTGTTTTCAGTGATTATCTGTTTAAGCTTCTTTTGATTGGAGACTCTGGTGTTGGAAAATCATGCCTTCTGCTCAGATTTGCTGTAAGCTTTCTGCTGCTTTTTCTGCTTGTTGTTTATTATGTTGGATACTCTTGTTTGGTTTTATAACCGATACTATAGTTTAATGTTGTATGGTTTTCATTTTCGGTTTACCTTATTTCCACTTGAGTTAATTGTTTTATCGCTCCCAAGTAACAATTAGAAGCCTTTGGGTGTGTTGCACTGGTTAAAGATGTGCTCCATCCGTTCCTTTTAGTTATTGTTGTAGGGTTATTTACACATACTAACAAACTAATAAATTTTGTTACTTTTCATATGTTTTGTTAGTAATACCCTAAACTATTTATTATCTCATTCCACATGGTATTTCTCTCTCTCTCCCCCCAAGACAAAACAATAATTAATGTTGTATTGGACTTTGAAAACAACAAGTTAATAGGAACAACAAATTTCTACAAATGTGACTAGTAAAAATGAACGGATGTAGTAATTGGTAACTGTAACATATTCAATTATTTATAAACAATGGCTACCTGTTTAATTCTTTGTTGGAGGTTTTTGTGTAGTTCTGGAAATAAATCAATAGTTGTGCTTGGAACTTTATGAGGTTGGGGGGAGATAAAACCTTTCGGGATATTGTTGAAAGTGATGAGGTTCTGTCTCCTGTTGTGAGCTTTACTTTGAACTAGAAAATGGCCTTATGGAGAATGTCTGATTAAAAAAATTATAGCATGTTAATTTTCTTAATTATTATTATTATTTTTTTAAAAAGAAGTATGTGTTTTGGCTGGTGTCATAAAATGTTTTTGCTATGATGATAGTTACCAACCTAAAAAAGGTAAAATGGCTTCACTTTGTATGTTGGTTGATCTTGGTTCGTGGAGATGATATGTGGCTTAATTTAGTGATTTGTATTAACGTTAAGTTTTATGCTACAGGATGATTCTTACATTGACAGCTACATAAGCACCATTGGAGTTGATTTTGTAAGTACAACTTTGCAAAGATCTATCTTGTACTGAGTTAAAGCAATTTCTGATATCTCATCGTGTTGTGTTATTTTATGTAGAAAATCCGCACAGTTGAACAGGATGGGAAGACCATTAAGCTCCAAATCGTATGTATATGATTGTCTTTGTTTTAGTTTCTTTGTCTATTGATATTAAATCATCAGTGAACTTGACATAACTTTTTTTTTAATCTTGTTGGAGATATTTTTCTATAAAATGTTTTTTGATAATCACTTCATTTTAATGAATAAGTTTCTGTACCACGTTGACATTGTTTCTTATCGTGTTGTGATCCAATTTCATATGTAGTGGGATACAGCTGGGCAAGAACGATTTAGGACAATCACCAGTAGCTACTACCGTGGGGCACATGGAATCATTGTGCGTAATGATGGTTTTGCATAAGTTTAAAATTTATATTTCCTGACTTTGTTGGTCTTTCCTTGCATGCTTTACTAACTGGTTATTCTGGCAGATTGTCTATGATGTGACAGATGAAGAGAGCTTCAATAATGTGAAGCAATGGCTCAGTGAAATTGACCGCTATGCTAGTGATAATGTTAACAAGCTCTTGGTTGGCAACAAGTGCGATCTGACATCAGAGAGAGCTGTGTCATATGAAACAGCTAAAGTATAACTTTGTTTTACACCCCTTGCATTTTTATTTTTATTTTTCATACTAAAGAAACATTCCATTTCAAGCTTGTGCTTGCATAGTGCTGTTGAGGCGTTACTACTCTTATGTTCCTATTTCAGCTATCCTTATCTATATTATGTTTTTCTTTAACAGGCATTTGCAGATGAAATAGGCATACCTTTTATGGAGACAAGTGCAAAGGATTCTACAAATGTCGAACAGGCATTTATGGCAATGGCTTCTTCCATCAAGGATAGGTACTCATATATTTTTTTTTTATAATTTAAATGTAGATGAACAGTTAAATATGCTTGGCCTTCTAAGCAAGTTAGAGCAAAAATAAGTTTACAACTCAAAAGAAGGATTACGATGAAAGCCCATTCCAACCTTCTTTAGCTTAGAGTCATTTTTATGCCTTTTAGTTTTCCTTGGCTGGGATAAGTCAATTTTGAGGACTTTGTATTGTATCCCATCCAATCAAATCTAGACCATGCTTAATATGAATGACTTAGAGCCATACAGAGGATACCTAAGTGAGGCAAAAAAATACCATGTAGTTTGGTTGGGTATGTACCCCTCGTCCAATCAATCAATGTCGTGTCATTTCTTCGTGTTAGTTTATTTTAGAATAAATTCAAATGTTAAACAAATTTTACCTAGAAGGTACTGATACCCAACCAAACTCCATGGTACCTAAGAATTTACCGAAAATCATAGTCACATGGCCACCGACCGAGGAAATCATTTTGGAAACCAAAATTCCAAAATCTCATTGCCCATTCTTTCTTGATCTGCTGCACAGCTCGCAACCAGCAGGGTAATCATCACCTTGAAAGGACTGTCATTTTATTTTAATTACTTTAATTAAAAGACTTGGTTTTAGGCTTAGATATACATTTGGCTCGTCCTGATGTTCAATGAAAAGTTGTTTACTTTAAAAGGACTCTCGTGTTATCACTAACTTCTTTTCGTTGCTGGCATTGATTCCCTCTAAGATCAAATTCTGATGATAATTTTTTCTTGAATGTAGAATGGCTAGCCAACCTACAAACAATGCAAGGCCTCCAACAGTGCAGATAAGGGGACAGCCAGTTGGCCAGAAAAGTGGGTGCTGCTCATCTTAA

Protein sequence

>MS.gene024151.t1

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTSERAVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNARPPTVQIRGQPVGQKSGCCSS