AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033585


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033585.t1 MTR_7g081700 99.505 202 1 0 1 202 1 202 5.44e-152 419
MS.gene033585.t1 MTR_8g006970 93.939 198 11 1 6 202 20 217 1.08e-138 386
MS.gene033585.t1 MTR_8g006970 94.186 172 10 0 1 172 1 172 1.21e-119 337
MS.gene033585.t1 MTR_2g005500 77.273 198 44 1 4 200 5 202 3.92e-114 323
MS.gene033585.t1 MTR_4g099470 86.705 173 23 0 30 202 6 178 1.44e-113 321
MS.gene033585.t1 MTR_1g115325 60.488 205 72 3 4 200 11 214 7.00e-87 255
MS.gene033585.t1 MTR_1g068740 61.058 208 70 4 4 202 11 216 1.24e-86 254
MS.gene033585.t1 MTR_1g068730 60.577 208 71 4 4 202 11 216 5.24e-86 253
MS.gene033585.t1 MTR_7g100020 61.058 208 70 4 4 202 11 216 6.81e-86 253
MS.gene033585.t1 MTR_4g063160 59.903 207 71 5 4 200 11 215 1.22e-82 244
MS.gene033585.t1 MTR_2g096550 54.902 204 81 4 5 200 12 212 2.60e-75 226
MS.gene033585.t1 MTR_2g005500 57.576 198 43 2 4 200 5 162 8.51e-75 223
MS.gene033585.t1 MTR_1g068740 65.772 149 50 1 4 152 11 158 3.60e-68 207
MS.gene033585.t1 MTR_1g068730 67.133 143 46 1 4 146 11 152 2.20e-67 204
MS.gene033585.t1 MTR_4g064897 45.972 211 105 2 1 202 5 215 6.39e-65 199
MS.gene033585.t1 MTR_2g005510 46.667 210 101 2 4 202 11 220 3.24e-62 192
MS.gene033585.t1 MTR_6g021790 47.619 210 96 3 5 201 3 211 4.13e-62 192
MS.gene033585.t1 MTR_2g027660 46.411 209 100 1 5 201 3 211 9.97e-62 191
MS.gene033585.t1 MTR_2g014990 47.393 211 101 1 2 202 7 217 1.56e-61 191
MS.gene033585.t1 MTR_8g093740 49.254 201 97 4 4 200 9 208 1.98e-60 187
MS.gene033585.t1 MTR_4g088090 45.972 211 104 1 2 202 7 217 3.60e-60 187
MS.gene033585.t1 MTR_7g051940 47.549 204 98 1 7 201 12 215 3.77e-60 187
MS.gene033585.t1 MTR_2g075950 46.919 211 102 2 2 202 7 217 5.81e-60 187
MS.gene033585.t1 MTR_7g103070 48.515 202 99 4 5 201 13 214 7.03e-60 186
MS.gene033585.t1 MTR_3g069510 45.283 212 106 3 1 202 5 216 1.73e-59 186
MS.gene033585.t1 MTR_4g079350 45.972 211 104 1 2 202 7 217 1.88e-59 186
MS.gene033585.t1 MTR_8g031660 47.692 195 94 1 5 199 3 189 3.76e-59 184
MS.gene033585.t1 MTR_1g029450 50.739 203 94 5 4 201 13 214 6.61e-59 184
MS.gene033585.t1 MTR_3g086980 43.868 212 106 2 2 200 10 221 4.24e-58 182
MS.gene033585.t1 MTR_2g090865 45.972 211 105 1 1 202 4 214 1.73e-57 181
MS.gene033585.t1 MTR_0262s0050 43.602 211 107 2 2 200 9 219 2.34e-57 180
MS.gene033585.t1 MTR_1g078200 45.283 212 100 3 6 201 12 223 2.99e-57 180
MS.gene033585.t1 MTR_3g096350 47.761 201 100 4 4 200 8 207 4.44e-57 179
MS.gene033585.t1 MTR_8g089985 50.595 168 83 0 2 169 11 178 8.77e-57 179
MS.gene033585.t1 MTR_2g083860 46.445 211 100 3 4 202 9 218 1.60e-56 178
MS.gene033585.t1 MTR_8g031870 50.610 164 81 0 7 170 5 168 2.61e-56 177
MS.gene033585.t1 MTR_1g052475 48.889 180 91 1 2 181 9 187 3.43e-56 177
MS.gene033585.t1 MTR_1g062760 47.761 201 99 5 5 200 11 210 2.29e-55 175
MS.gene033585.t1 MTR_8g036220 49.123 171 87 0 6 176 14 184 8.16e-55 174
MS.gene033585.t1 MTR_8g027220 43.434 198 112 0 1 198 19 216 1.26e-54 174
MS.gene033585.t1 MTR_1g090717 48.529 204 101 4 2 201 9 212 1.84e-54 172
MS.gene033585.t1 MTR_6g079550 45.918 196 104 1 1 196 5 198 4.76e-54 172
MS.gene033585.t1 MTR_8g107070 50.265 189 85 1 1 180 7 195 4.88e-54 173
MS.gene033585.t1 MTR_8g031680 48.485 165 85 0 5 169 3 167 7.79e-54 171
MS.gene033585.t1 MTR_7g405790 49.133 173 88 0 7 179 14 186 7.85e-54 171
MS.gene033585.t1 MTR_8g031830 49.032 155 79 0 7 161 5 159 1.69e-49 159
MS.gene033585.t1 MTR_3g064390 40.625 192 111 1 10 201 12 200 6.62e-48 155
MS.gene033585.t1 MTR_5g076590 40.104 192 112 1 10 201 12 200 1.68e-46 152
MS.gene033585.t1 MTR_3g096350 57.576 132 51 4 4 131 8 138 5.48e-46 149
MS.gene033585.t1 MTR_3g096350 60.163 123 46 3 4 124 8 129 1.95e-45 148
MS.gene033585.t1 MTR_8g093740 45.294 170 89 3 35 200 6 175 1.06e-44 147
MS.gene033585.t1 MTR_8g090215 38.500 200 113 2 9 201 10 206 7.43e-44 145
MS.gene033585.t1 MTR_2g102060 37.436 195 114 2 10 202 12 200 9.78e-44 145
MS.gene033585.t1 MTR_8g103550 39.175 194 110 3 10 201 11 198 1.07e-43 145
MS.gene033585.t1 MTR_7g117910 50.794 126 62 0 6 131 18 143 1.46e-42 142
MS.gene033585.t1 MTR_1g094220 42.236 161 92 1 10 169 33 193 1.83e-42 142
MS.gene033585.t1 MTR_3g087160 42.857 161 92 0 9 169 10 170 4.37e-42 141
MS.gene033585.t1 MTR_5g013900 40.994 161 95 0 9 169 10 170 8.61e-42 140
MS.gene033585.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 8.81e-42 140
MS.gene033585.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 1.28e-41 140
MS.gene033585.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 3.58e-41 139
MS.gene033585.t1 MTR_4g098950 36.683 199 117 2 9 201 10 205 4.33e-41 138
MS.gene033585.t1 MTR_7g103070 46.405 153 77 4 54 201 6 158 8.71e-40 134
MS.gene033585.t1 MTR_2g101890 37.811 201 114 5 8 200 10 207 1.63e-38 132
MS.gene033585.t1 MTR_4g069850 38.500 200 112 6 8 199 8 204 2.23e-38 131
MS.gene033585.t1 MTR_4g012940 37.811 201 114 5 8 200 8 205 4.89e-38 130
MS.gene033585.t1 MTR_3g064390 44.094 127 71 0 10 136 12 138 1.92e-34 120
MS.gene033585.t1 MTR_8g092020 38.554 166 95 3 8 166 12 177 7.28e-34 120
MS.gene033585.t1 MTR_1g097420 37.500 168 98 3 8 168 8 175 1.18e-33 119
MS.gene033585.t1 MTR_6g039490 36.310 168 100 3 8 168 8 175 1.64e-29 109
MS.gene033585.t1 MTR_1g097420 34.706 170 102 4 6 168 35 202 6.07e-28 105
MS.gene033585.t1 MTR_4g015220 55.844 77 34 0 124 200 4 80 1.19e-25 95.1
MS.gene033585.t1 MTR_3g107707 30.108 186 117 4 9 188 14 192 6.20e-23 92.0
MS.gene033585.t1 MTR_3g107717 30.108 186 117 4 9 188 14 192 6.40e-23 92.0
MS.gene033585.t1 MTR_3g107713 30.108 186 117 4 9 188 14 192 6.82e-23 92.0
MS.gene033585.t1 MTR_4g088055 33.136 169 99 6 8 164 6 172 1.23e-22 90.9
MS.gene033585.t1 MTR_4g073250 32.934 167 98 6 8 162 6 170 4.77e-22 89.4
MS.gene033585.t1 MTR_8g075240 33.136 169 99 6 8 164 6 172 6.62e-22 89.0
MS.gene033585.t1 MTR_6g087980 31.138 167 101 5 8 162 6 170 1.14e-21 88.6
MS.gene033585.t1 MTR_2g090875 30.769 169 103 5 8 164 6 172 1.80e-21 87.8
MS.gene033585.t1 MTR_3g078260 30.769 182 107 6 8 177 8 182 3.44e-21 87.4
MS.gene033585.t1 MTR_5g022600 32.544 169 100 6 8 164 6 172 3.62e-21 87.0
MS.gene033585.t1 MTR_8g031810 39.048 105 50 1 7 111 5 95 5.09e-20 81.3
MS.gene033585.t1 MTR_1g059590 34.682 173 103 4 5 177 395 557 6.11e-20 87.4
MS.gene033585.t1 MTR_1g059590 34.682 173 103 4 5 177 428 590 6.97e-20 87.4
MS.gene033585.t1 MTR_4g113620 30.000 170 97 5 9 173 14 166 1.83e-18 80.1
MS.gene033585.t1 MTR_3g078260 33.621 116 74 3 8 122 8 121 2.07e-17 75.9
MS.gene033585.t1 MTR_1452s0010 38.710 93 54 1 37 126 10 102 1.88e-16 72.0
MS.gene033585.t1 MTR_5g078090 34.375 160 87 6 9 159 20 170 1.71e-14 68.9
MS.gene033585.t1 MTR_1686s0010 40.000 70 42 0 37 106 10 79 1.06e-13 64.3
MS.gene033585.t1 MTR_5g015370 30.189 159 101 5 9 162 20 173 1.12e-11 61.2
MS.gene033585.t1 MTR_2g078000 43.548 62 30 1 69 130 46 102 2.43e-11 58.5
MS.gene033585.t1 MTR_1g069245 41.026 78 45 1 37 114 122 198 8.91e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033585.t1 AT1G02130 91.626 203 16 1 1 202 1 203 2.92e-141 392
MS.gene033585.t1 AT4G17530 87.129 202 26 0 1 202 1 202 4.03e-136 379
MS.gene033585.t1 AT5G47200 87.129 202 26 0 1 202 1 202 4.26e-135 377
MS.gene033585.t1 AT3G11730 75.369 203 47 2 1 200 1 203 5.36e-112 318
MS.gene033585.t1 AT5G59840 61.836 207 70 4 4 202 11 216 1.02e-87 257
MS.gene033585.t1 AT3G46060 60.870 207 72 4 4 202 11 216 2.82e-86 254
MS.gene033585.t1 AT3G46060 60.870 207 72 4 4 202 11 216 2.82e-86 254
MS.gene033585.t1 AT3G46060 60.870 207 72 4 4 202 11 216 2.82e-86 254
MS.gene033585.t1 AT3G53610 59.903 207 74 3 4 202 11 216 4.66e-86 253
MS.gene033585.t1 AT3G53610 59.903 207 74 3 4 202 11 216 4.66e-86 253
MS.gene033585.t1 AT3G53610 59.903 207 74 3 4 202 11 216 4.66e-86 253
MS.gene033585.t1 AT5G03520 61.951 205 70 3 4 201 11 214 1.25e-83 247
MS.gene033585.t1 AT3G09900 60.870 207 71 3 4 201 11 216 5.57e-83 245
MS.gene033585.t1 AT4G17160 48.039 204 96 2 5 200 3 204 1.29e-64 198
MS.gene033585.t1 AT5G03520 58.434 166 61 3 43 201 40 204 2.64e-63 195
MS.gene033585.t1 AT1G07410 45.238 210 107 2 1 202 5 214 4.13e-63 195
MS.gene033585.t1 AT4G35860 54.545 165 75 0 5 169 3 167 4.19e-63 195
MS.gene033585.t1 AT4G18430 49.048 210 97 2 2 201 7 216 1.91e-62 193
MS.gene033585.t1 AT4G17170 46.890 209 99 2 5 201 3 211 6.61e-62 192
MS.gene033585.t1 AT5G60860 47.867 211 100 1 2 202 7 217 8.60e-62 191
MS.gene033585.t1 AT1G09630 46.977 215 96 3 2 202 6 216 1.60e-61 191
MS.gene033585.t1 AT1G06400 46.190 210 104 2 2 202 7 216 2.98e-61 190
MS.gene033585.t1 AT3G46830 44.131 213 108 1 1 202 5 217 1.11e-60 189
MS.gene033585.t1 AT3G46830 44.131 213 108 1 1 202 5 217 1.11e-60 189
MS.gene033585.t1 AT3G07410 52.571 175 83 0 6 180 10 184 1.78e-60 188
MS.gene033585.t1 AT5G47520 47.143 210 98 2 6 202 12 221 3.51e-60 187
MS.gene033585.t1 AT3G15060 46.919 211 102 1 2 202 7 217 4.69e-60 187
MS.gene033585.t1 AT5G45750 47.596 208 100 2 4 202 9 216 9.74e-60 186
MS.gene033585.t1 AT1G16920 47.115 208 101 3 4 202 9 216 1.85e-59 186
MS.gene033585.t1 AT5G59150 42.254 213 112 1 1 202 5 217 2.77e-59 185
MS.gene033585.t1 AT1G28550 45.714 210 103 2 4 202 9 218 4.41e-59 185
MS.gene033585.t1 AT2G43130 46.569 204 101 3 6 201 10 213 5.23e-59 184
MS.gene033585.t1 AT2G33870 45.714 210 103 2 4 202 9 218 5.25e-59 184
MS.gene033585.t1 AT3G12160 44.811 212 103 3 2 200 9 219 1.67e-58 183
MS.gene033585.t1 AT4G39990 45.933 209 101 3 6 202 15 223 2.49e-58 183
MS.gene033585.t1 AT1G05810 46.154 208 101 2 6 202 10 217 2.52e-58 183
MS.gene033585.t1 AT5G47960 52.663 169 80 0 1 169 8 176 3.81e-58 182
MS.gene033585.t1 AT4G18800 47.087 206 102 2 4 202 9 214 4.05e-58 182
MS.gene033585.t1 AT1G05810 46.154 208 101 2 6 202 56 263 5.49e-58 183
MS.gene033585.t1 AT5G65270 44.340 212 103 3 6 202 15 226 1.77e-57 181
MS.gene033585.t1 AT1G43890 56.805 169 70 3 3 169 8 175 1.93e-57 180
MS.gene033585.t1 AT1G43890 56.805 169 70 3 3 169 8 175 1.93e-57 180
MS.gene033585.t1 AT1G43890 56.805 169 70 3 3 169 8 175 1.93e-57 180
MS.gene033585.t1 AT2G31680 49.714 175 88 0 6 180 10 184 6.22e-57 179
MS.gene033585.t1 AT5G03530 49.505 202 96 4 5 201 10 210 2.01e-56 177
MS.gene033585.t1 AT5G03530 49.505 202 96 4 5 201 10 210 2.01e-56 177
MS.gene033585.t1 AT1G73640 47.525 202 97 3 4 196 9 210 7.10e-56 177
MS.gene033585.t1 AT1G18200 50.857 175 86 0 2 176 7 181 3.39e-55 175
MS.gene033585.t1 AT4G19640 42.188 192 108 1 10 201 12 200 6.64e-49 158
MS.gene033585.t1 AT1G01200 42.786 201 112 2 1 198 21 221 7.45e-49 159
MS.gene033585.t1 AT5G45130 41.237 194 107 3 10 201 12 200 5.21e-46 150
MS.gene033585.t1 AT3G09910 48.066 181 90 4 5 183 10 188 5.97e-46 150
MS.gene033585.t1 AT3G09910 48.066 181 90 4 5 183 10 188 5.97e-46 150
MS.gene033585.t1 AT3G09910 45.320 203 99 5 5 202 10 205 7.91e-46 150
MS.gene033585.t1 AT3G09910 45.320 203 99 5 5 202 10 205 7.91e-46 150
MS.gene033585.t1 AT3G09910 45.320 203 99 5 5 202 10 205 7.91e-46 150
MS.gene033585.t1 AT5G45130 40.625 192 107 3 12 201 22 208 2.49e-44 147
MS.gene033585.t1 AT2G44610 37.879 198 118 1 9 201 10 207 3.10e-43 144
MS.gene033585.t1 AT4G35860 53.333 120 56 0 50 169 2 121 7.00e-43 142
MS.gene033585.t1 AT3G54840 44.805 154 84 1 10 162 35 188 1.22e-42 142
MS.gene033585.t1 AT3G54840 44.805 154 84 1 10 162 35 188 1.48e-42 142
MS.gene033585.t1 AT3G54840 44.444 153 84 1 11 162 2 154 2.58e-42 140
MS.gene033585.t1 AT2G22290 36.683 199 118 2 9 201 10 206 4.05e-41 139
MS.gene033585.t1 AT4G39890 40.741 162 95 1 9 169 10 171 9.84e-41 138
MS.gene033585.t1 AT5G10260 36.041 197 121 1 9 200 10 206 5.79e-40 135
MS.gene033585.t1 AT5G59150 39.024 164 89 1 50 202 3 166 1.00e-39 134
MS.gene033585.t1 AT5G64990 40.964 166 98 0 9 174 8 173 2.97e-39 134
MS.gene033585.t1 AT3G18820 39.000 200 111 5 8 199 8 204 3.28e-39 134
MS.gene033585.t1 AT1G52280 37.198 207 119 5 1 199 1 204 9.05e-39 132
MS.gene033585.t1 AT3G16100 37.500 200 114 5 8 199 8 204 2.66e-38 131
MS.gene033585.t1 AT1G49300 40.476 168 93 3 8 168 8 175 3.09e-37 129
MS.gene033585.t1 AT1G49300 40.476 168 93 3 8 168 8 175 3.09e-37 129
MS.gene033585.t1 AT5G64990 39.306 173 98 1 9 174 8 180 1.98e-36 127
MS.gene033585.t1 AT4G19640 45.038 131 72 0 10 140 12 142 2.50e-36 126
MS.gene033585.t1 AT2G21880 39.157 166 94 3 8 166 9 174 3.16e-36 126
MS.gene033585.t1 AT4G09720 36.683 199 119 3 8 199 8 206 1.11e-35 124
MS.gene033585.t1 AT4G19640 45.600 125 68 0 10 134 12 136 2.49e-35 122
MS.gene033585.t1 AT1G22740 34.804 204 111 5 8 199 8 201 7.73e-34 120
MS.gene033585.t1 AT4G09720 34.804 204 121 3 8 199 8 211 1.29e-33 119
MS.gene033585.t1 AT4G09720 33.810 210 121 3 8 199 8 217 1.26e-32 117
MS.gene033585.t1 AT5G39620 38.182 165 95 3 9 166 6 170 3.87e-30 110
MS.gene033585.t1 AT2G21880 40.146 137 75 3 37 166 13 149 3.36e-28 105
MS.gene033585.t1 AT2G21880 40.146 137 75 3 37 166 13 149 3.36e-28 105
MS.gene033585.t1 AT4G09720 37.059 170 100 3 37 199 3 172 5.80e-28 103
MS.gene033585.t1 AT4G09720 37.059 170 100 3 37 199 3 172 5.80e-28 103
MS.gene033585.t1 AT4G09720 37.059 170 100 3 37 199 3 172 5.80e-28 103
MS.gene033585.t1 AT2G21880 34.337 166 94 4 8 166 9 166 2.10e-26 100
MS.gene033585.t1 AT4G35020 34.320 169 97 6 8 164 6 172 6.09e-24 94.4
MS.gene033585.t1 AT4G35020 34.320 169 97 6 8 164 6 172 6.09e-24 94.4
MS.gene033585.t1 AT4G35020 34.320 169 97 6 8 164 6 172 6.09e-24 94.4
MS.gene033585.t1 AT5G55080 32.121 165 101 3 9 169 14 171 9.41e-24 94.4
MS.gene033585.t1 AT2G44690 32.934 167 98 5 8 162 18 182 3.70e-23 92.4
MS.gene033585.t1 AT3G51300 34.132 167 96 6 10 164 8 172 3.77e-23 92.0
MS.gene033585.t1 AT5G55190 29.891 184 120 4 9 188 14 192 1.45e-22 91.3
MS.gene033585.t1 AT2G17800 33.728 169 98 6 8 164 6 172 1.59e-22 90.5
MS.gene033585.t1 AT2G17800 33.728 169 98 6 8 164 6 172 1.59e-22 90.5
MS.gene033585.t1 AT5G20010 29.670 182 123 3 9 188 14 192 1.68e-22 90.9
MS.gene033585.t1 AT5G46025 42.056 107 61 1 70 175 6 112 2.79e-22 87.4
MS.gene033585.t1 AT5G20020 30.435 161 109 2 9 169 14 171 4.28e-22 90.1
MS.gene033585.t1 AT4G35950 33.136 169 99 6 8 164 6 172 4.94e-22 89.4
MS.gene033585.t1 AT4G28950 29.703 202 121 8 8 199 6 196 5.53e-22 89.4
MS.gene033585.t1 AT1G75840 31.361 169 102 5 8 164 6 172 5.72e-22 89.0
MS.gene033585.t1 AT5G45970 31.737 167 100 6 8 162 6 170 1.40e-21 88.2
MS.gene033585.t1 AT3G48040 30.769 169 103 5 8 164 8 174 1.14e-20 85.9
MS.gene033585.t1 AT1G20090 30.178 169 104 5 8 164 5 171 2.18e-20 84.7
MS.gene033585.t1 AT3G48040 34.146 123 78 3 8 129 8 128 1.65e-19 82.0
MS.gene033585.t1 AT5G62880 29.940 167 103 5 8 162 8 172 5.91e-19 81.6
MS.gene033585.t1 AT5G62880 33.333 123 79 3 8 129 8 128 1.61e-18 79.7
MS.gene033585.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.63e-18 78.2
MS.gene033585.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.63e-18 78.2
MS.gene033585.t1 AT3G49870 35.366 164 86 7 9 162 1 154 1.34e-14 68.9
MS.gene033585.t1 AT3G49870 35.366 164 86 7 9 162 20 173 3.96e-14 68.2
MS.gene033585.t1 AT5G67560 35.366 164 86 7 9 162 20 173 6.57e-14 67.4
MS.gene033585.t1 AT3G51290 33.803 142 80 6 35 164 634 773 1.17e-13 69.3
MS.gene033585.t1 AT5G37680 32.500 160 90 6 9 159 20 170 3.14e-13 65.5
MS.gene033585.t1 AT2G15310 31.731 104 63 4 10 113 19 114 6.20e-11 59.7

Find 42 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGTCGAACAGGCATTTA+TGG 0.216366 7.4:-24796871 MS.gene033585:CDS
TTTGCACTTGTCTCCATAAA+AGG 0.231314 7.4:+24796903 None:intergenic
CAGGCATTTGCAGATGAAAT+AGG 0.278594 7.4:-24796930 MS.gene033585:CDS
CAGCTGGGCAAGAACGATTT+AGG 0.305104 7.4:-24797401 MS.gene033585:CDS
ACATACGATTTGGAGCTTAA+TGG 0.308951 7.4:+24797629 None:intergenic
GGAGGCCTTGCATTGTTTGT+AGG 0.364796 7.4:+24796042 None:intergenic
AAGTGAGGAACATACTATTC+AGG 0.384451 7.4:+24799311 None:intergenic
ATATGAGTACCTATCCTTGA+TGG 0.396903 7.4:+24796836 None:intergenic
GAAAATCCGCACAGTTGAAC+AGG 0.426213 7.4:-24797661 MS.gene033585:CDS
CCCCTTATCTGCACTGTTGG+AGG 0.429950 7.4:+24796024 None:intergenic
GGCCTCCAACAGTGCAGATA+AGG 0.443333 7.4:-24796026 MS.gene033585:CDS
GCCTTGCATTGTTTGTAGGT+TGG 0.450220 7.4:+24796046 None:intergenic
GCCTCCAACAGTGCAGATAA+GGG 0.451383 7.4:-24796025 MS.gene033585:CDS
GGATTCTACAAATGTCGAAC+AGG 0.469392 7.4:-24796880 MS.gene033585:CDS
GGCAATGGCTTCTTCCATCA+AGG 0.481447 7.4:-24796850 MS.gene033585:CDS
TTGATTGGAGACTCTGGTGT+TGG 0.492888 7.4:-24798738 MS.gene033585:CDS
AATGTTAACAAGCTCTTGGT+TGG 0.494106 7.4:-24797161 MS.gene033585:CDS
TGATAATGTTAACAAGCTCT+TGG 0.495654 7.4:-24797165 MS.gene033585:CDS
AGCTACTACCGTGGGGCACA+TGG 0.500719 7.4:-24797366 MS.gene033585:CDS
TGTCCCCTTATCTGCACTGT+TGG 0.505248 7.4:+24796021 None:intergenic
CATATGTAGTGGGATACAGC+TGG 0.519499 7.4:-24797417 MS.gene033585:intron
CAGCCAGTTGGCCAGAAAAG+TGG 0.520499 7.4:-24796000 MS.gene033585:CDS
CGAACAGGCATTTATGGCAA+TGG 0.532623 7.4:-24796865 MS.gene033585:CDS
TGCCCCACGGTAGTAGCTAC+TGG 0.542749 7.4:+24797371 None:intergenic
GACAGCTACATAAGCACCAT+TGG 0.547410 7.4:-24797776 MS.gene033585:CDS
AGCCAGTTGGCCAGAAAAGT+GGG 0.560192 7.4:-24795999 MS.gene033585:CDS
CAGATAAGGGGACAGCCAGT+TGG 0.562181 7.4:-24796012 MS.gene033585:CDS
ATCCGCACAGTTGAACAGGA+TGG 0.566980 7.4:-24797657 MS.gene033585:CDS
TCCGCACAGTTGAACAGGAT+GGG 0.571363 7.4:-24797656 MS.gene033585:CDS
TTACAGCAAATCTGAGCAGA+AGG 0.577201 7.4:+24798706 None:intergenic
TCCCATCCTGTTCAACTGTG+CGG 0.594596 7.4:+24797655 None:intergenic
GCCAACCTACAAACAATGCA+AGG 0.594963 7.4:-24796047 MS.gene033585:CDS
TGGCTTCTTCCATCAAGGAT+AGG 0.595319 7.4:-24796845 MS.gene033585:intron
ACTTACAAAATCAACTCCAA+TGG 0.612564 7.4:+24797760 None:intergenic
ATATGTAGTGGGATACAGCT+GGG 0.616758 7.4:-24797416 MS.gene033585:intron
GCTTCAATAATGTGAAGCAA+TGG 0.626631 7.4:-24797214 MS.gene033585:CDS
CCTCCAACAGTGCAGATAAG+GGG 0.629255 7.4:-24796024 MS.gene033585:CDS
TCACCAGTAGCTACTACCGT+GGG 0.632543 7.4:-24797374 MS.gene033585:CDS
CAATGATTCCATGTGCCCCA+CGG 0.637566 7.4:+24797358 None:intergenic
ATCACCAGTAGCTACTACCG+TGG 0.643184 7.4:-24797375 MS.gene033585:CDS
TAACATTATCACTAGCATAG+CGG 0.731455 7.4:+24797177 None:intergenic
CACCAGTAGCTACTACCGTG+GGG 0.776894 7.4:-24797373 MS.gene033585:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAATAAAAATGCA+AGG + chr7.4:24798238-24798257 None:intergenic 10.0%
!! AAATAAAAATAAAAATGCAA+GGG + chr7.4:24798237-24798256 None:intergenic 10.0%
!! ATTCAATTATTTATAAACAA+TGG - chr7.4:24797078-24797097 MS.gene033585:intron 10.0%
!!! AAAAATTAAGATTTTACAAT+TGG - chr7.4:24796407-24796426 MS.gene033585:intron 10.0%
!!! AAAATTAAGATTTTACAATT+GGG - chr7.4:24796408-24796427 MS.gene033585:intron 10.0%
!! AAACATAAAAAAAACGTAAA+AGG + chr7.4:24796069-24796088 None:intergenic 15.0%
!! AACAATAATTAATGTTGTAT+TGG - chr7.4:24796964-24796983 MS.gene033585:intron 15.0%
!! AACATATATAATTCAATCTA+GGG + chr7.4:24796199-24796218 None:intergenic 15.0%
!! AATAAAAATAAAAATGCAAG+GGG + chr7.4:24798236-24798255 None:intergenic 15.0%
!! AATGAGATAATAAATAGTTT+AGG + chr7.4:24796908-24796927 None:intergenic 15.0%
!! AGAAAAACATAATATAGATA+AGG + chr7.4:24798347-24798366 None:intergenic 15.0%
!! ATGAGATAATAAATAGTTTA+GGG + chr7.4:24796907-24796926 None:intergenic 15.0%
!! ATTACTTTAATTAAAAGACT+TGG - chr7.4:24799070-24799089 MS.gene033585:intron 15.0%
!! TAACATATATAATTCAATCT+AGG + chr7.4:24796200-24796219 None:intergenic 15.0%
!! TTGAATTATATATGTTAATC+AGG - chr7.4:24796203-24796222 MS.gene033585:intron 15.0%
!!! AACTTTTTTTTTAATCTTGT+TGG - chr7.4:24797758-24797777 MS.gene033585:intron 15.0%
!!! ATATTATGTTTTTCTTTAAC+AGG - chr7.4:24798352-24798371 MS.gene033585:intron 15.0%
!!! ATTAATTATTGTTTTGTCTT+GGG + chr7.4:24796957-24796976 None:intergenic 15.0%
!! ACAACATTAAACTATAGTAT+CGG + chr7.4:24796683-24796702 None:intergenic 20.0%
!! AGAAAATAAAAAACGAATCA+AGG + chr7.4:24796035-24796054 None:intergenic 20.0%
!! CAGGAAAAAAAAACAATTTA+GGG + chr7.4:24796167-24796186 None:intergenic 20.0%
!! GAAAAGTTGTTTACTTTAAA+AGG - chr7.4:24799135-24799154 MS.gene033585:intron 20.0%
!! TACTATAGTTTAATGTTGTA+TGG - chr7.4:24796684-24796703 MS.gene033585:intron 20.0%
!! TCAGGAAAAAAAAACAATTT+AGG + chr7.4:24796168-24796187 None:intergenic 20.0%
!! TTTGAAAACAACAAGTTAAT+AGG - chr7.4:24796989-24797008 MS.gene033585:intron 20.0%
!!! ATTTTTTCTTGAATGTAGAA+TGG - chr7.4:24799228-24799247 MS.gene033585:intron 20.0%
!!! CATTAATTATTGTTTTGTCT+TGG + chr7.4:24796958-24796977 None:intergenic 20.0%
!!! TAATTAAAAGACTTGGTTTT+AGG - chr7.4:24799077-24799096 MS.gene033585:intron 20.0%
!!! TAATTTGGTTTATATAAGCT+GGG - chr7.4:24796109-24796128 MS.gene033585:intron 20.0%
!!! TTAAAAAGAAGTATGTGTTT+TGG - chr7.4:24797336-24797355 MS.gene033585:intron 20.0%
!!! TTAAACAAATTTTACCTAGA+AGG - chr7.4:24798857-24798876 MS.gene033585:intron 20.0%
!!! TTAATTATTGTTTTGTCTTG+GGG + chr7.4:24796956-24796975 None:intergenic 20.0%
!!! TTAATTTGGTTTATATAAGC+TGG - chr7.4:24796108-24796127 MS.gene033585:intron 20.0%
!!! TTTTATGTTTTCTCTCAAAA+GGG - chr7.4:24796079-24796098 MS.gene033585:intron 20.0%
!!! TTTTTATGTTTTCTCTCAAA+AGG - chr7.4:24796078-24796097 MS.gene033585:intron 20.0%
! AAGTGACTAGTAAAAATGAA+CGG - chr7.4:24797030-24797049 MS.gene033585:intron 25.0%
! AATAAATCAATAGTTGTGCT+TGG - chr7.4:24797145-24797164 MS.gene033585:CDS 25.0%
! AATTAACTCAAGTGGAAATA+AGG + chr7.4:24796727-24796746 None:intergenic 25.0%
! ACAACAATAACTAAAAGGAA+CGG + chr7.4:24796818-24796837 None:intergenic 25.0%
! ACAATCATATACATACGATT+TGG + chr7.4:24797685-24797704 None:intergenic 25.0%
! ACATCTCTTATAAATCAACA+AGG + chr7.4:24796315-24796334 None:intergenic 25.0%
! ATGAACAGTTAAATATGCTT+TGG - chr7.4:24798513-24798532 MS.gene033585:intron 25.0%
! ATTTATTATCTCATTCCACA+TGG - chr7.4:24796913-24796932 MS.gene033585:CDS 25.0%
! CAAAAAAATACCATGTAGTT+TGG - chr7.4:24798755-24798774 MS.gene033585:CDS 25.0%
! CATCTCTTATAAATCAACAA+GGG + chr7.4:24796314-24796333 None:intergenic 25.0%
! CTTTACTTTGAACTAGAAAA+TGG - chr7.4:24797245-24797264 MS.gene033585:CDS 25.0%
! GATAAAACAATTAACTCAAG+TGG + chr7.4:24796735-24796754 None:intergenic 25.0%
! TAAGTCATTCATATTAAGCA+TGG + chr7.4:24798707-24798726 None:intergenic 25.0%
! TAAGTTTACAACTCAAAAGA+AGG - chr7.4:24798557-24798576 MS.gene033585:intron 25.0%
! TGATTTCATGTTGATATATG+TGG - chr7.4:24796440-24796459 MS.gene033585:intron 25.0%
! TTTAGGCTTAGATATACATT+TGG - chr7.4:24799094-24799113 MS.gene033585:intron 25.0%
!! ATGATTTTCGGTAAATTCTT+AGG + chr7.4:24798911-24798930 None:intergenic 25.0%
!! TGTTGTATGGTTTTCATTTT+CGG - chr7.4:24796697-24796716 MS.gene033585:intron 25.0%
!!! AACATTAAGTTTTATGCTAC+AGG - chr7.4:24797488-24797507 MS.gene033585:intron 25.0%
!!! TAATTATTGTTTTGTCTTGG+GGG + chr7.4:24796955-24796974 None:intergenic 25.0%
!!! TCCTTTTAGTTATTGTTGTA+GGG - chr7.4:24796819-24796838 MS.gene033585:intron 25.0%
!!! TTCCTTTTAGTTATTGTTGT+AGG - chr7.4:24796818-24796837 MS.gene033585:intron 25.0%
AAAATACCATGTAGTTTGGT+TGG - chr7.4:24798759-24798778 MS.gene033585:CDS 30.0%
AAATACCATGTAGTTTGGTT+GGG - chr7.4:24798760-24798779 MS.gene033585:CDS 30.0%
AAATGAACGGATGTAGTAAT+TGG - chr7.4:24797043-24797062 MS.gene033585:intron 30.0%
AAATGACTCTAAGCTAAAGA+AGG + chr7.4:24798605-24798624 None:intergenic 30.0%
ACCCTACAACAATAACTAAA+AGG + chr7.4:24796823-24796842 None:intergenic 30.0%
ACTTACAAAATCAACTCCAA+TGG + chr7.4:24797544-24797563 None:intergenic 30.0%
ATAAAATGACAGTCCTTTCA+AGG + chr7.4:24799046-24799065 None:intergenic 30.0%
CATCAGAATTTGATCTTAGA+GGG + chr7.4:24799205-24799224 None:intergenic 30.0%
CATGAAAACTCAAAAACACA+AGG + chr7.4:24796242-24796261 None:intergenic 30.0%
CCAACCTAAAAAAGGTAAAA+TGG - chr7.4:24797396-24797415 MS.gene033585:CDS 30.0%
CTACCTGTTTAATTCTTTGT+TGG - chr7.4:24797101-24797120 MS.gene033585:intron 30.0%
CTTTGTATGTTAGTTGATCT+TGG - chr7.4:24797424-24797443 MS.gene033585:intron 30.0%
GATAGTTACCAACCTAAAAA+AGG - chr7.4:24797388-24797407 MS.gene033585:CDS 30.0%
GATCCAATTTCATATGTAGT+GGG - chr7.4:24797874-24797893 MS.gene033585:intron 30.0%
TAACATTATCACTAGCATAG+CGG + chr7.4:24798127-24798146 None:intergenic 30.0%
TAGATAAGGATAGCTGAAAT+AGG + chr7.4:24798333-24798352 None:intergenic 30.0%
TATCCCACTACATATGAAAT+TGG + chr7.4:24797880-24797899 None:intergenic 30.0%
TCATCAGAATTTGATCTTAG+AGG + chr7.4:24799206-24799225 None:intergenic 30.0%
TGATCCAATTTCATATGTAG+TGG - chr7.4:24797873-24797892 MS.gene033585:intron 30.0%
TTAATCAGACATTCTCCATA+AGG + chr7.4:24797271-24797290 None:intergenic 30.0%
TTATGTTGGATACTCTTGTT+TGG - chr7.4:24796649-24796668 MS.gene033585:intron 30.0%
TTCAAAGTAAAGCTCAAAAC+AGG + chr7.4:24797237-24797256 None:intergenic 30.0%
TTCATGTTGATATATGTGGA+TGG - chr7.4:24796444-24796463 MS.gene033585:intron 30.0%
TTTATATTTCCCGACTTTGT+TGG - chr7.4:24797997-24798016 MS.gene033585:intron 30.0%
! ACAACTTTTCATTGAACATC+AGG + chr7.4:24799125-24799144 None:intergenic 30.0%
! CTGTTTAAGCTTCTTTTGAT+TGG - chr7.4:24796548-24796567 MS.gene033585:intron 30.0%
! TGAAATAGGCATACCTTTTA+TGG - chr7.4:24798385-24798404 MS.gene033585:intron 30.0%
! TGATAATGTTAACAAGCTCT+TGG - chr7.4:24798136-24798155 MS.gene033585:intron 30.0%
!! AATTATTGTTTTGTCTTGGG+GGG + chr7.4:24796954-24796973 None:intergenic 30.0%
!! CTGCTTGTTGTTTATTATGT+TGG - chr7.4:24796635-24796654 MS.gene033585:intron 30.0%
!! GAAGCCATTTTACCTTTTTT+AGG + chr7.4:24797403-24797422 None:intergenic 30.0%
!! TATTTTTGCTCTAGCTTAGA+AGG + chr7.4:24798539-24798558 None:intergenic 30.0%
!!! CCATTTTACCTTTTTTAGGT+TGG + chr7.4:24797399-24797418 None:intergenic 30.0%
!!! TTATGCCTTTTAGTTTTCCT+TGG - chr7.4:24798625-24798644 MS.gene033585:intron 30.0%
AAATGTCGAACAGGCATTTA+TGG - chr7.4:24798430-24798449 MS.gene033585:intron 35.0%
AAGCAACAATTAGAAGCCTT+TGG - chr7.4:24796761-24796780 MS.gene033585:intron 35.0%
AAGCATGGTCTAGATTTGAT+TGG + chr7.4:24798692-24798711 None:intergenic 35.0%
AAGCTAAAGAAGGTTGGAAT+GGG + chr7.4:24798595-24798614 None:intergenic 35.0%
AAGTGAGGAACATACTATTC+AGG + chr7.4:24795993-24796012 None:intergenic 35.0%
AATGTTAACAAGCTCTTGGT+TGG - chr7.4:24798140-24798159 MS.gene033585:intron 35.0%
ACTTTCAACAATATCCCGAA+AGG + chr7.4:24797199-24797218 None:intergenic 35.0%
AGCAACAATTAGAAGCCTTT+GGG - chr7.4:24796762-24796781 MS.gene033585:intron 35.0%
ATATGAGTACCTATCCTTGA+TGG + chr7.4:24798468-24798487 None:intergenic 35.0%
ATGGTCTAGATTTGATTGGA+TGG + chr7.4:24798688-24798707 None:intergenic 35.0%
CAATAACTAAAAGGAACGGA+TGG + chr7.4:24796814-24796833 None:intergenic 35.0%
CACTAACAAGATCAGATTCA+GGG + chr7.4:24796289-24796308 None:intergenic 35.0%
CCTCCAACAAAGAATTAAAC+AGG + chr7.4:24797107-24797126 None:intergenic 35.0%
CCTGTTTAATTCTTTGTTGG+AGG - chr7.4:24797104-24797123 MS.gene033585:intron 35.0%
GATAAGAAACAATGTCAACG+TGG + chr7.4:24797845-24797864 None:intergenic 35.0%
GCTTCAATAATGTGAAGCAA+TGG - chr7.4:24798087-24798106 MS.gene033585:intron 35.0%
GCTTTACTAACTGGTTATTC+TGG - chr7.4:24798033-24798052 MS.gene033585:intron 35.0%
GGATATTGTTGAAAGTGATG+AGG - chr7.4:24797203-24797222 MS.gene033585:CDS 35.0%
GGTTTCCAAAATGATTTCCT+CGG + chr7.4:24798951-24798970 None:intergenic 35.0%
TAAGCTAAAGAAGGTTGGAA+TGG + chr7.4:24798596-24798615 None:intergenic 35.0%
TACCGAAAATCATAGTCACA+TGG - chr7.4:24798918-24798937 MS.gene033585:intron 35.0%
TCACTAACAAGATCAGATTC+AGG + chr7.4:24796290-24796309 None:intergenic 35.0%
TGGTCTAGATTTGATTGGAT+GGG + chr7.4:24798687-24798706 None:intergenic 35.0%
TTTGCACTTGTCTCCATAAA+AGG + chr7.4:24798401-24798420 None:intergenic 35.0%
! AAGGCTTCTAATTGTTGCTT+CGG + chr7.4:24796761-24796780 None:intergenic 35.0%
! ACATACGATTTGGAGCTTAA+TGG + chr7.4:24797675-24797694 None:intergenic 35.0%
! ATGACACGACATTGATTGAT+TGG + chr7.4:24798800-24798819 None:intergenic 35.0%
! ATGTTTTCTCTCAAAAGGGT+TGG - chr7.4:24796083-24796102 MS.gene033585:intron 35.0%
! CAATCTAGGGTTAGAATTTC+AGG + chr7.4:24796186-24796205 None:intergenic 35.0%
! TGAACTAGAAAATGGCCTTA+TGG - chr7.4:24797253-24797272 MS.gene033585:intron 35.0%
! TTTTATGGAGACAAGTGCAA+AGG - chr7.4:24798400-24798419 MS.gene033585:intron 35.0%
!! CAAAAGGGTTGGTGTTAATT+TGG - chr7.4:24796094-24796113 MS.gene033585:intron 35.0%
!!! AAAGAAGTATGTGTTTTGGC+TGG - chr7.4:24797340-24797359 MS.gene033585:intron 35.0%
!!! GCAACGAGATTTTGGAATTT+TGG + chr7.4:24798972-24798991 None:intergenic 35.0%
!!! GGTATTTTTTTGCCTCACTT+AGG + chr7.4:24798747-24798766 None:intergenic 35.0%
AAGGAAAGACCAACAAAGTC+GGG + chr7.4:24798009-24798028 None:intergenic 40.0%
AATGACTTAGAGCCATACAG+AGG - chr7.4:24798718-24798737 MS.gene033585:CDS 40.0%
ACATACCCAACCAAACTACA+TGG + chr7.4:24798768-24798787 None:intergenic 40.0%
ACCAGTTAGTAAAGCATGCA+AGG + chr7.4:24798028-24798047 None:intergenic 40.0%
AGAGAGAGAGAAATACCATG+TGG + chr7.4:24796931-24796950 None:intergenic 40.0%
AGGGTAATCATCACCTTGAA+AGG - chr7.4:24799030-24799049 MS.gene033585:intron 40.0%
ATACAGAGGATACCTAAGTG+AGG - chr7.4:24798732-24798751 MS.gene033585:CDS 40.0%
CAAGGAAAGACCAACAAAGT+CGG + chr7.4:24798010-24798029 None:intergenic 40.0%
CAGGCATTTGCAGATGAAAT+AGG - chr7.4:24798371-24798390 MS.gene033585:intron 40.0%
CGAATCAAGGAAAATCGAGA+AGG + chr7.4:24796022-24796041 None:intergenic 40.0%
CTTGGAACTTTATGAGGTTG+GGG - chr7.4:24797163-24797182 MS.gene033585:CDS 40.0%
GACTCTAAGCTAAAGAAGGT+TGG + chr7.4:24798601-24798620 None:intergenic 40.0%
GCAGCAGATCAAGAAAGAAT+GGG + chr7.4:24798994-24799013 None:intergenic 40.0%
GCTTGGAACTTTATGAGGTT+GGG - chr7.4:24797162-24797181 MS.gene033585:CDS 40.0%
GGAATCATTGTGCGTAATGA+TGG - chr7.4:24797956-24797975 MS.gene033585:intron 40.0%
GGATTCTACAAATGTCGAAC+AGG - chr7.4:24798421-24798440 MS.gene033585:intron 40.0%
GTTGTGCTTGGAACTTTATG+AGG - chr7.4:24797157-24797176 MS.gene033585:CDS 40.0%
TCACTTAGGTATCCTCTGTA+TGG + chr7.4:24798733-24798752 None:intergenic 40.0%
TCCAAAATGATTTCCTCGGT+CGG + chr7.4:24798947-24798966 None:intergenic 40.0%
TCCTTGCATGCTTTACTAAC+TGG - chr7.4:24798024-24798043 MS.gene033585:intron 40.0%
TCGAGAAGGAATAGAAAGTG+AGG + chr7.4:24796008-24796027 None:intergenic 40.0%
TGCAGCAGATCAAGAAAGAA+TGG + chr7.4:24798995-24799014 None:intergenic 40.0%
TGCTTGGAACTTTATGAGGT+TGG - chr7.4:24797161-24797180 MS.gene033585:CDS 40.0%
TTACAGCAAATCTGAGCAGA+AGG + chr7.4:24796598-24796617 None:intergenic 40.0%
TTGGAACTTTATGAGGTTGG+GGG - chr7.4:24797164-24797183 MS.gene033585:CDS 40.0%
! AAATTGACTTATCCCAGCCA+AGG + chr7.4:24798645-24798664 None:intergenic 40.0%
! AAGAATGGGCAACGAGATTT+TGG + chr7.4:24798980-24798999 None:intergenic 40.0%
! ACATTGATTGATTGGACGAG+GGG + chr7.4:24798792-24798811 None:intergenic 40.0%
! ATATGTAGTGGGATACAGCT+GGG - chr7.4:24797885-24797904 MS.gene033585:intron 40.0%
! CACTAACTTCTTTTCGTTGC+TGG - chr7.4:24799171-24799190 MS.gene033585:intron 40.0%
! GACATTGATTGATTGGACGA+GGG + chr7.4:24798793-24798812 None:intergenic 40.0%
! GCTGGGATAAGTCAATTTTG+AGG - chr7.4:24798647-24798666 MS.gene033585:intron 40.0%
! GGCCATGTGACTATGATTTT+CGG + chr7.4:24798923-24798942 None:intergenic 40.0%
! TGGAGGTTTTTGTGTAGTTC+TGG - chr7.4:24797121-24797140 MS.gene033585:CDS 40.0%
! TGTTAGTTGATCTTGGTTCG+TGG - chr7.4:24797431-24797450 MS.gene033585:intron 40.0%
!! CTTCTTTTGATTGGAGACTC+TGG - chr7.4:24796557-24796576 MS.gene033585:intron 40.0%
!!! CCTTTTAGTTTTCCTTGGCT+GGG - chr7.4:24798630-24798649 MS.gene033585:intron 40.0%
AAAATGATTTCCTCGGTCGG+TGG + chr7.4:24798944-24798963 None:intergenic 45.0%
CCCAGCCAAGGAAAACTAAA+AGG + chr7.4:24798633-24798652 None:intergenic 45.0%
CGAACAGGCATTTATGGCAA+TGG - chr7.4:24798436-24798455 MS.gene033585:intron 45.0%
GAAAATCCGCACAGTTGAAC+AGG - chr7.4:24797640-24797659 MS.gene033585:CDS 45.0%
GACAGCTACATAAGCACCAT+TGG - chr7.4:24797525-24797544 MS.gene033585:intron 45.0%
GCCAACCTACAAACAATGCA+AGG - chr7.4:24799254-24799273 MS.gene033585:intron 45.0%
GCCTTGCATTGTTTGTAGGT+TGG + chr7.4:24799258-24799277 None:intergenic 45.0%
GTGATAGAGCTGATGTGTTG+TGG - chr7.4:24796505-24796524 MS.gene033585:intron 45.0%
GTTGGGTATCAGTACCTTCT+AGG + chr7.4:24798874-24798893 None:intergenic 45.0%
TGATACCCAACCAAACTCCA+CGG - chr7.4:24798883-24798902 MS.gene033585:intron 45.0%
TGGAACTTTATGAGGTTGGG+GGG - chr7.4:24797165-24797184 MS.gene033585:CDS 45.0%
TGGCTTCTTCCATCAAGGAT+AGG - chr7.4:24798456-24798475 MS.gene033585:intron 45.0%
TGGGGGGAGATAAAACCTTT+CGG - chr7.4:24797181-24797200 MS.gene033585:CDS 45.0%
TGGTTCGTGGAGATGATATG+TGG - chr7.4:24797444-24797463 MS.gene033585:intron 45.0%
TTGATTGGAGACTCTGGTGT+TGG - chr7.4:24796563-24796582 MS.gene033585:intron 45.0%
! ACCGACCGAGGAAATCATTT+TGG - chr7.4:24798943-24798962 MS.gene033585:intron 45.0%
! CATATGTAGTGGGATACAGC+TGG - chr7.4:24797884-24797903 MS.gene033585:intron 45.0%
! CGACATTGATTGATTGGACG+AGG + chr7.4:24798794-24798813 None:intergenic 45.0%
! CGGTAAATTCTTAGGTACCG+TGG + chr7.4:24798903-24798922 None:intergenic 45.0%
! TTCTTAGGTACCGTGGAGTT+TGG + chr7.4:24798896-24798915 None:intergenic 45.0%
!!! GCCTTTTAGTTTTCCTTGGC+TGG - chr7.4:24798629-24798648 MS.gene033585:intron 45.0%
AACCAGTGCAACACACCCAA+AGG + chr7.4:24796780-24796799 None:intergenic 50.0%
AGCCAGTTGGCCAGAAAAGT+GGG - chr7.4:24799302-24799321 MS.gene033585:intron 50.0%
ATCACCAGTAGCTACTACCG+TGG - chr7.4:24797926-24797945 MS.gene033585:intron 50.0%
ATCCGCACAGTTGAACAGGA+TGG - chr7.4:24797644-24797663 MS.gene033585:CDS 50.0%
CAAGGTGATGATTACCCTGC+TGG + chr7.4:24799028-24799047 None:intergenic 50.0%
CAATGATTCCATGTGCCCCA+CGG + chr7.4:24797946-24797965 None:intergenic 50.0%
CAGCTGGGCAAGAACGATTT+AGG - chr7.4:24797900-24797919 MS.gene033585:intron 50.0%
CCTCCAACAGTGCAGATAAG+GGG - chr7.4:24799277-24799296 MS.gene033585:intron 50.0%
GCCTCCAACAGTGCAGATAA+GGG - chr7.4:24799276-24799295 MS.gene033585:intron 50.0%
GGAGGCCTTGCATTGTTTGT+AGG + chr7.4:24799262-24799281 None:intergenic 50.0%
GGCAATGGCTTCTTCCATCA+AGG - chr7.4:24798451-24798470 MS.gene033585:intron 50.0%
GGGGGGAGATAAAACCTTTC+GGG - chr7.4:24797182-24797201 MS.gene033585:CDS 50.0%
TCACCAGTAGCTACTACCGT+GGG - chr7.4:24797927-24797946 MS.gene033585:intron 50.0%
TCCCATCCTGTTCAACTGTG+CGG + chr7.4:24797649-24797668 None:intergenic 50.0%
TCCGCACAGTTGAACAGGAT+GGG - chr7.4:24797645-24797664 MS.gene033585:CDS 50.0%
TGTCCCCTTATCTGCACTGT+TGG + chr7.4:24799283-24799302 None:intergenic 50.0%
! AGGTACCGTGGAGTTTGGTT+GGG + chr7.4:24798891-24798910 None:intergenic 50.0%
! GTGCTTGCATAGTGCTGTTG+AGG - chr7.4:24798289-24798308 MS.gene033585:intron 50.0%
! TAGGTACCGTGGAGTTTGGT+TGG + chr7.4:24798892-24798911 None:intergenic 50.0%
!! ATGAGCAGCACCCACTTTTC+TGG + chr7.4:24799315-24799334 None:intergenic 50.0%
AGCCTTTGGGTGTGTTGCAC+TGG - chr7.4:24796775-24796794 MS.gene033585:intron 55.0%
CACCAGTAGCTACTACCGTG+GGG - chr7.4:24797928-24797947 MS.gene033585:intron 55.0%
CAGATAAGGGGACAGCCAGT+TGG - chr7.4:24799289-24799308 MS.gene033585:intron 55.0%
CAGCCAGTTGGCCAGAAAAG+TGG - chr7.4:24799301-24799320 MS.gene033585:intron 55.0%
CCCCTTATCTGCACTGTTGG+AGG + chr7.4:24799280-24799299 None:intergenic 55.0%
GGCCTCCAACAGTGCAGATA+AGG - chr7.4:24799275-24799294 MS.gene033585:intron 55.0%
!! CACCCACTTTTCTGGCCAAC+TGG + chr7.4:24799307-24799326 None:intergenic 55.0%
AGCTACTACCGTGGGGCACA+TGG - chr7.4:24797935-24797954 MS.gene033585:intron 60.0%
TGCACAGCTCGCAACCAGCA+GGG - chr7.4:24799011-24799030 MS.gene033585:intron 60.0%
TGCCCCACGGTAGTAGCTAC+TGG + chr7.4:24797933-24797952 None:intergenic 60.0%
AGTCACATGGCCACCGACCG+AGG - chr7.4:24798931-24798950 MS.gene033585:intron 65.0%
CTGCACAGCTCGCAACCAGC+AGG - chr7.4:24799010-24799029 MS.gene033585:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 24795984 24799339 24795984 ID=MS.gene033585
chr7.4 mRNA 24795984 24799339 24795984 ID=MS.gene033585.t1;Parent=MS.gene033585
chr7.4 exon 24799326 24799339 24799326 ID=MS.gene033585.t1.exon1;Parent=MS.gene033585.t1
chr7.4 CDS 24799326 24799339 24799326 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
chr7.4 exon 24798710 24798782 24798710 ID=MS.gene033585.t1.exon2;Parent=MS.gene033585.t1
chr7.4 CDS 24798710 24798782 24798710 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
chr7.4 exon 24797766 24797813 24797766 ID=MS.gene033585.t1.exon3;Parent=MS.gene033585.t1
chr7.4 CDS 24797766 24797813 24797766 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
chr7.4 exon 24797635 24797682 24797635 ID=MS.gene033585.t1.exon4;Parent=MS.gene033585.t1
chr7.4 CDS 24797635 24797682 24797635 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
chr7.4 exon 24797359 24797430 24797359 ID=MS.gene033585.t1.exon5;Parent=MS.gene033585.t1
chr7.4 CDS 24797359 24797430 24797359 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
chr7.4 exon 24797109 24797264 24797109 ID=MS.gene033585.t1.exon6;Parent=MS.gene033585.t1
chr7.4 CDS 24797109 24797264 24797109 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
chr7.4 exon 24796846 24796949 24796846 ID=MS.gene033585.t1.exon7;Parent=MS.gene033585.t1
chr7.4 CDS 24796846 24796949 24796846 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
chr7.4 exon 24795984 24796077 24795984 ID=MS.gene033585.t1.exon8;Parent=MS.gene033585.t1
chr7.4 CDS 24795984 24796077 24795984 ID=cds.MS.gene033585.t1;Parent=MS.gene033585.t1
Gene Sequence

>MS.gene033585

ATGAATCCTGAATAGTATGTTCCTCACTTTCTATTCCTTCTCGATTTTCCTTGATTCGTTTTTTATTTTCTGAAATTTCGTTCCTTTTACGTTTTTTTTATGTTTTCTCTCAAAAGGGTTGGTGTTAATTTGGTTTATATAAGCTGGGTTATGTTAATTTCAATTTTTGTTGTTTTCTAACCCTAAATTGTTTTTTTTTCCTGAAATTCTAACCCTAGATTGAATTATATATGTTAATCAGGATTCAACTGTGATCCTTGTGTTTTTGAGTTTTCATGATTGATTTTATAGTTTTAGAATTACCCTGAATCTGATCTTGTTAGTGATCCCTTGTTGATTTATAAGAGATGTTTGAGTTTGTAATTCAATCAATAAGATAAAATTTGATGCTTGTGTTAGCTTTTGTTTATAGATCTTTGAAAAAAAAATTAAGATTTTACAATTGGGTTTTTTGTTTGATTTCATGTTGATATATGTGGATGGTTAATTTAGATGCTGATTCACAATCTATTTTTGTTGAAGTGATAGAGCTGATGTGTTGTGGTTATTGTTTTCAGTGATTATCTGTTTAAGCTTCTTTTGATTGGAGACTCTGGTGTTGGAAAATCATGCCTTCTGCTCAGATTTGCTGTAAGCTTTCTGCTGCTTTTTCTGCTTGTTGTTTATTATGTTGGATACTCTTGTTTGGTTTTATAACCGATACTATAGTTTAATGTTGTATGGTTTTCATTTTCGGTTTACCTTATTTCCACTTGAGTTAATTGTTTTATCGCTCCGAAGCAACAATTAGAAGCCTTTGGGTGTGTTGCACTGGTTAAAGATGTGCTCCATCCGTTCCTTTTAGTTATTGTTGTAGGGTTATTTACACATACTAACAAACTAATAAATTTTGTTACTTTTCATATGTTTTGTTAGTAATACCCTAAACTATTTATTATCTCATTCCACATGGTATTTCTCTCTCTCTCCCCCCAAGACAAAACAATAATTAATGTTGTATTGGACTTTGAAAACAACAAGTTAATAGGAACAACAAATTTCTACAAAAGTGACTAGTAAAAATGAACGGATGTAGTAATTGGTAACTGTAACATATTCAATTATTTATAAACAATGGCTACCTGTTTAATTCTTTGTTGGAGGTTTTTGTGTAGTTCTGGAAATAAATCAATAGTTGTGCTTGGAACTTTATGAGGTTGGGGGGAGATAAAACCTTTCGGGATATTGTTGAAAGTGATGAGGTTCTGTCTCCTGTTTTGAGCTTTACTTTGAACTAGAAAATGGCCTTATGGAGAATGTCTGATTAAAAAAATTATAGCATGTTAATTTTCTTAATTATTATTATTATTTTTTTAAAAAGAAGTATGTGTTTTGGCTGGTGTCATAAAATGTTTTTGCTATGATGATAGTTACCAACCTAAAAAAGGTAAAATGGCTTCACTTTGTATGTTAGTTGATCTTGGTTCGTGGAGATGATATGTGGCTTAATTTAGTGATTTGTATTAACATTAAGTTTTATGCTACAGGATGATTCTTACATTGACAGCTACATAAGCACCATTGGAGTTGATTTTGTAAGTACAACTTTGCAAAGATCTATCTTGCACTGAGTTAAAGCAATTTCTGATATCTCATCGTGTTGTGTTATTTTATGTAGAAAATCCGCACAGTTGAACAGGATGGGAAGACCATTAAGCTCCAAATCGTATGTATATGATTGTCTTTGTTTTAGTTTCTTTGTCTATTGATATTAAATCATCAGTGAACTTGACATAACTTTTTTTTTAATCTTGTTGGAGATATTTTTCTATAAAATGTTTTTTGATAATCACTTCATTTTAATGAATAAGTTTCTGTACCACGTTGACATTGTTTCTTATCGTGTTTTGTGATCCAATTTCATATGTAGTGGGATACAGCTGGGCAAGAACGATTTAGGACAATCACCAGTAGCTACTACCGTGGGGCACATGGAATCATTGTGCGTAATGATGGTTTTGCATAAGTTTAAAATTTATATTTCCCGACTTTGTTGGTCTTTCCTTGCATGCTTTACTAACTGGTTATTCTGGCAGATTGTCTATGATGTGACAGATGAAGAGAGCTTCAATAATGTGAAGCAATGGCTCAGTGAAATTGACCGCTATGCTAGTGATAATGTTAACAAGCTCTTGGTTGGCAACAAGTGCGATCTGACATCAGAGAGAGCTGTGTCATATGAAACAGCTAAAGTATAACTTTGTTTTACACCCCTTGCATTTTTATTTTTATTTTTCATACTAAAGAAACATTCAATTTCAAGCTTGTGCTTGCATAGTGCTGTTGAGGCGTTACTACTCTTATGTTCCTATTTCAGCTATCCTTATCTATATTATGTTTTTCTTTAACAGGCATTTGCAGATGAAATAGGCATACCTTTTATGGAGACAAGTGCAAAGGATTCTACAAATGTCGAACAGGCATTTATGGCAATGGCTTCTTCCATCAAGGATAGGTACTCATATATTTTTTTTTATAATTTAAATGTAGATGAACAGTTAAATATGCTTTGGCCTTCTAAGCTAGAGCAAAAATAAGTTTACAACTCAAAAGAAGGATTACGATGAAGCCCATTCCAACCTTCTTTAGCTTAGAGTCATTTTTATGCCTTTTAGTTTTCCTTGGCTGGGATAAGTCAATTTTGAGGACTTTGTATTGTATCCCATCCAATCAAATCTAGACCATGCTTAATATGAATGACTTAGAGCCATACAGAGGATACCTAAGTGAGGCAAAAAAATACCATGTAGTTTGGTTGGGTATGTACCCCTCGTCCAATCAATCAATGTCGTGTCATTTCTTCATGTTAGTTTATTTTAGAATAAATTCAAATGTTAAACAAATTTTACCTAGAAGGTACTGATACCCAACCAAACTCCACGGTACCTAAGAATTTACCGAAAATCATAGTCACATGGCCACCGACCGAGGAAATCATTTTGGAAACCAAAATTCCAAAATCTCGTTGCCCATTCTTTCTTGATCTGCTGCACAGCTCGCAACCAGCAGGGTAATCATCACCTTGAAAGGACTGTCATTTTATTTTAATTACTTTAATTAAAAGACTTGGTTTTAGGCTTAGATATACATTTGGCTCGTCCTGATGTTCAATGAAAAGTTGTTTACTTTAAAAGGACTCTCGTGTTATCACTAACTTCTTTTCGTTGCTGGCATTGATTCCCTCTAAGATCAAATTCTGATGATAATTTTTTCTTGAATGTAGAATGGCTAGCCAACCTACAAACAATGCAAGGCCTCCAACAGTGCAGATAAGGGGACAGCCAGTTGGCCAGAAAAGTGGGTGCTGCTCATCTTAA

Protein sequence

>MS.gene033585.t1

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTSERAVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNARPPTVQIRGQPVGQKSGCCSS