AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055394

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055394.t1 MTR_8g006970 100.000 198 0 0 6 203 20 217 2.15e-148 411
MS.gene055394.t1 MTR_7g081700 94.581 203 10 1 1 203 1 202 5.10e-144 399
MS.gene055394.t1 MTR_8g006970 100.000 172 0 0 1 172 1 172 2.27e-126 353
MS.gene055394.t1 MTR_2g005500 75.253 198 49 0 4 201 5 202 3.69e-112 318
MS.gene055394.t1 MTR_4g099470 86.207 174 23 1 30 203 6 178 1.63e-110 313
MS.gene055394.t1 MTR_1g115325 59.223 206 74 3 4 201 11 214 5.20e-84 248
MS.gene055394.t1 MTR_1g068740 59.809 209 72 4 4 203 11 216 1.05e-83 247
MS.gene055394.t1 MTR_7g100020 59.809 209 72 4 4 203 11 216 3.65e-83 246
MS.gene055394.t1 MTR_1g068730 59.330 209 73 4 4 203 11 216 4.44e-83 246
MS.gene055394.t1 MTR_4g063160 58.173 208 74 5 4 201 11 215 1.61e-79 236
MS.gene055394.t1 MTR_2g005500 55.556 198 48 1 4 201 5 162 6.87e-73 218
MS.gene055394.t1 MTR_2g096550 53.171 205 84 4 5 201 12 212 3.57e-71 215
MS.gene055394.t1 MTR_1g068740 65.772 149 50 1 4 152 11 158 2.94e-68 207
MS.gene055394.t1 MTR_1g068730 65.101 149 51 1 4 152 11 158 1.92e-67 204
MS.gene055394.t1 MTR_4g064897 47.393 211 103 2 1 203 5 215 1.10e-66 204
MS.gene055394.t1 MTR_3g069510 47.642 212 102 3 1 203 5 216 1.65e-63 196
MS.gene055394.t1 MTR_2g005510 47.867 211 98 3 4 203 11 220 1.53e-62 194
MS.gene055394.t1 MTR_6g021790 47.393 211 96 3 5 202 3 211 7.60e-61 189
MS.gene055394.t1 MTR_2g014990 46.698 212 102 2 2 203 7 217 6.43e-60 187
MS.gene055394.t1 MTR_2g075950 48.095 210 98 3 4 203 9 217 1.01e-59 186
MS.gene055394.t1 MTR_3g086980 44.811 212 105 2 2 201 10 221 2.30e-59 186
MS.gene055394.t1 MTR_4g088090 45.755 212 104 2 2 203 7 217 3.92e-59 185
MS.gene055394.t1 MTR_4g079350 46.226 212 103 2 2 203 7 217 3.92e-59 185
MS.gene055394.t1 MTR_2g027660 46.411 209 101 2 5 202 3 211 5.62e-59 184
MS.gene055394.t1 MTR_7g103070 48.020 202 101 3 5 202 13 214 6.37e-59 184
MS.gene055394.t1 MTR_8g089985 46.047 215 103 4 2 203 11 225 4.05e-58 182
MS.gene055394.t1 MTR_8g093740 48.259 201 100 4 4 201 9 208 4.28e-58 182
MS.gene055394.t1 MTR_1g029450 50.246 203 96 4 4 202 13 214 6.75e-58 181
MS.gene055394.t1 MTR_0262s0050 44.076 211 107 2 2 201 9 219 2.65e-57 180
MS.gene055394.t1 MTR_8g031660 45.918 196 97 1 5 200 3 189 3.82e-57 179
MS.gene055394.t1 MTR_2g090865 46.919 211 104 2 1 203 4 214 5.28e-57 179
MS.gene055394.t1 MTR_8g031870 50.610 164 81 0 7 170 5 168 2.62e-56 177
MS.gene055394.t1 MTR_2g083860 45.972 211 102 3 4 203 9 218 3.12e-56 177
MS.gene055394.t1 MTR_1g078200 44.811 212 102 3 6 202 12 223 3.40e-56 177
MS.gene055394.t1 MTR_3g096350 47.525 202 100 5 4 201 8 207 5.10e-56 176
MS.gene055394.t1 MTR_8g036220 42.523 214 106 3 6 202 14 227 3.22e-55 175
MS.gene055394.t1 MTR_8g027220 44.221 199 110 1 1 199 19 216 3.37e-55 175
MS.gene055394.t1 MTR_7g051940 45.631 206 100 2 7 202 12 215 4.28e-55 174
MS.gene055394.t1 MTR_8g031680 48.485 165 85 0 5 169 3 167 4.44e-54 172
MS.gene055394.t1 MTR_1g052475 42.791 215 107 4 2 201 9 222 8.51e-54 171
MS.gene055394.t1 MTR_6g079550 48.588 177 91 0 1 177 5 181 3.45e-53 169
MS.gene055394.t1 MTR_1g062760 46.269 201 103 4 5 201 11 210 3.61e-52 167
MS.gene055394.t1 MTR_1g090717 45.588 204 108 3 2 202 9 212 1.39e-51 165
MS.gene055394.t1 MTR_8g107070 52.047 171 82 0 1 171 7 177 1.08e-50 165
MS.gene055394.t1 MTR_7g405790 51.282 156 76 0 7 162 14 169 3.80e-50 162
MS.gene055394.t1 MTR_8g031830 49.673 153 77 0 7 159 5 157 3.96e-50 161
MS.gene055394.t1 MTR_3g064390 41.026 195 107 3 10 202 12 200 2.41e-46 152
MS.gene055394.t1 MTR_3g096350 60.163 123 46 3 4 124 8 129 2.14e-45 147
MS.gene055394.t1 MTR_3g096350 60.163 123 46 3 4 124 8 129 3.63e-45 147
MS.gene055394.t1 MTR_5g076590 40.000 195 109 3 10 202 12 200 1.39e-44 147
MS.gene055394.t1 MTR_8g103550 39.487 195 109 3 10 202 11 198 1.34e-43 144
MS.gene055394.t1 MTR_7g117910 50.388 129 64 0 6 134 18 146 6.08e-43 143
MS.gene055394.t1 MTR_8g093740 43.503 177 89 4 32 201 3 175 1.75e-42 141
MS.gene055394.t1 MTR_5g013900 37.563 197 117 2 9 200 10 205 3.36e-42 141
MS.gene055394.t1 MTR_1g094220 43.038 158 89 1 10 166 33 190 4.50e-42 140
MS.gene055394.t1 MTR_8g090215 37.313 201 115 3 9 202 10 206 6.57e-42 140
MS.gene055394.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 1.99e-41 139
MS.gene055394.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 2.10e-41 139
MS.gene055394.t1 MTR_2g102060 37.755 196 113 3 10 203 12 200 2.30e-41 139
MS.gene055394.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 6.91e-41 139
MS.gene055394.t1 MTR_4g098950 39.130 161 98 0 9 169 10 170 2.55e-40 136
MS.gene055394.t1 MTR_3g087160 40.994 161 95 0 9 169 10 170 2.91e-40 136
MS.gene055394.t1 MTR_2g101890 37.313 201 116 4 8 201 10 207 4.22e-39 133
MS.gene055394.t1 MTR_7g103070 45.752 153 79 3 54 202 6 158 9.57e-39 131
MS.gene055394.t1 MTR_4g012940 37.313 201 116 4 8 201 8 205 1.41e-38 132
MS.gene055394.t1 MTR_4g069850 37.000 200 116 4 8 200 8 204 6.10e-38 130
MS.gene055394.t1 MTR_8g092020 39.157 166 94 3 8 166 12 177 2.13e-34 121
MS.gene055394.t1 MTR_3g064390 44.094 127 71 0 10 136 12 138 4.81e-34 119
MS.gene055394.t1 MTR_1g097420 37.952 166 96 3 8 166 8 173 1.11e-33 119
MS.gene055394.t1 MTR_6g039490 36.747 166 98 3 8 166 8 173 3.56e-29 108
MS.gene055394.t1 MTR_1g097420 35.119 168 100 4 6 166 35 200 5.86e-28 105
MS.gene055394.t1 MTR_3g078260 31.217 189 115 6 8 183 8 194 2.26e-23 93.2
MS.gene055394.t1 MTR_4g088055 34.286 175 98 7 8 170 6 175 4.76e-23 92.0
MS.gene055394.t1 MTR_6g087980 32.335 167 99 5 8 162 6 170 7.14e-23 91.7
MS.gene055394.t1 MTR_3g107707 32.447 188 111 6 9 189 14 192 7.62e-23 92.0
MS.gene055394.t1 MTR_3g107717 32.447 188 111 6 9 189 14 192 8.21e-23 92.0
MS.gene055394.t1 MTR_3g107713 32.447 188 111 6 9 189 14 192 8.47e-23 91.7
MS.gene055394.t1 MTR_4g073250 31.737 167 100 5 8 162 6 170 2.06e-22 90.1
MS.gene055394.t1 MTR_8g075240 33.728 169 98 6 8 164 6 172 2.77e-22 89.7
MS.gene055394.t1 MTR_2g090875 32.000 175 102 6 8 170 6 175 4.17e-22 89.4
MS.gene055394.t1 MTR_5g022600 33.136 169 99 6 8 164 6 172 1.50e-21 87.8
MS.gene055394.t1 MTR_4g015220 48.750 80 40 1 122 201 2 80 2.71e-21 84.0
MS.gene055394.t1 MTR_1g059590 35.260 173 102 4 5 177 395 557 3.03e-20 88.2
MS.gene055394.t1 MTR_1g059590 35.260 173 102 4 5 177 428 590 3.29e-20 88.2
MS.gene055394.t1 MTR_8g031810 39.048 105 50 1 7 111 5 95 5.74e-20 80.9
MS.gene055394.t1 MTR_4g113620 31.977 172 91 7 9 173 14 166 9.51e-18 78.2
MS.gene055394.t1 MTR_3g078260 33.621 116 74 3 8 122 8 121 1.88e-17 75.9
MS.gene055394.t1 MTR_1452s0010 44.286 70 39 0 37 106 10 79 3.78e-16 71.2
MS.gene055394.t1 MTR_5g078090 32.500 160 90 6 9 159 20 170 1.04e-13 67.0
MS.gene055394.t1 MTR_1686s0010 40.000 70 42 0 37 106 10 79 1.18e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055394.t1 AT1G02130 91.133 203 18 0 1 203 1 203 1.54e-142 395
MS.gene055394.t1 AT5G47200 86.700 203 26 1 1 203 1 202 1.22e-132 370
MS.gene055394.t1 AT4G17530 86.207 203 27 1 1 203 1 202 8.31e-132 368
MS.gene055394.t1 AT3G11730 73.399 203 52 2 1 201 1 203 1.20e-110 315
MS.gene055394.t1 AT5G59840 60.287 209 71 4 4 203 11 216 7.29e-85 250
MS.gene055394.t1 AT3G46060 58.852 209 74 4 4 203 11 216 5.02e-83 245
MS.gene055394.t1 AT3G46060 58.852 209 74 4 4 203 11 216 5.02e-83 245
MS.gene055394.t1 AT3G46060 58.852 209 74 4 4 203 11 216 5.02e-83 245
MS.gene055394.t1 AT3G53610 58.173 208 77 3 4 203 11 216 5.13e-83 245
MS.gene055394.t1 AT3G53610 58.173 208 77 3 4 203 11 216 5.13e-83 245
MS.gene055394.t1 AT3G53610 58.173 208 77 3 4 203 11 216 5.13e-83 245
MS.gene055394.t1 AT5G03520 59.709 206 74 3 4 202 11 214 1.53e-80 239
MS.gene055394.t1 AT3G09900 58.654 208 75 3 4 202 11 216 5.04e-79 235
MS.gene055394.t1 AT1G07410 45.714 210 107 2 1 203 5 214 7.25e-64 197
MS.gene055394.t1 AT1G09630 45.498 211 106 2 2 203 6 216 2.96e-61 190
MS.gene055394.t1 AT3G46830 45.070 213 107 1 1 203 5 217 8.51e-61 189
MS.gene055394.t1 AT3G46830 45.070 213 107 1 1 203 5 217 8.51e-61 189
MS.gene055394.t1 AT4G35860 53.939 165 76 0 5 169 3 167 8.68e-61 189
MS.gene055394.t1 AT4G17160 47.317 205 97 3 5 201 3 204 1.41e-60 188
MS.gene055394.t1 AT5G45750 47.596 208 101 1 4 203 9 216 1.53e-60 188
MS.gene055394.t1 AT4G39990 47.368 209 99 3 6 203 15 223 1.78e-60 188
MS.gene055394.t1 AT4G18430 49.282 209 95 3 4 202 9 216 2.50e-60 188
MS.gene055394.t1 AT3G15060 47.170 212 101 2 2 203 7 217 4.22e-60 187
MS.gene055394.t1 AT5G03520 55.689 167 65 3 43 202 40 204 4.58e-60 187
MS.gene055394.t1 AT5G60860 46.698 212 102 2 2 203 7 217 7.85e-60 187
MS.gene055394.t1 AT2G33870 46.445 211 101 3 4 203 9 218 1.49e-59 186
MS.gene055394.t1 AT1G16920 48.077 208 100 2 4 203 9 216 1.67e-59 186
MS.gene055394.t1 AT4G17170 52.663 169 80 0 5 173 3 171 2.41e-59 185
MS.gene055394.t1 AT5G59150 43.192 213 111 1 1 203 5 217 4.15e-59 185
MS.gene055394.t1 AT5G47520 46.667 210 100 2 6 203 12 221 7.10e-59 184
MS.gene055394.t1 AT1G06400 45.238 210 107 1 2 203 7 216 1.10e-58 184
MS.gene055394.t1 AT5G47960 44.651 215 107 3 1 203 8 222 1.69e-58 183
MS.gene055394.t1 AT1G28550 45.972 211 102 3 4 203 9 218 3.07e-58 182
MS.gene055394.t1 AT4G18800 46.602 206 104 1 4 203 9 214 4.94e-58 182
MS.gene055394.t1 AT5G65270 44.811 212 103 3 6 203 15 226 5.26e-58 182
MS.gene055394.t1 AT1G73640 48.515 202 96 2 4 197 9 210 9.83e-58 182
MS.gene055394.t1 AT3G12160 44.811 212 104 3 2 201 9 219 2.68e-57 180
MS.gene055394.t1 AT3G07410 45.894 207 102 2 6 202 10 216 1.42e-56 178
MS.gene055394.t1 AT1G43890 54.118 170 75 3 2 169 7 175 5.55e-55 174
MS.gene055394.t1 AT1G43890 54.118 170 75 3 2 169 7 175 5.55e-55 174
MS.gene055394.t1 AT1G43890 54.118 170 75 3 2 169 7 175 5.55e-55 174
MS.gene055394.t1 AT2G43130 43.137 204 109 2 6 202 10 213 6.09e-55 174
MS.gene055394.t1 AT1G18200 50.000 180 90 0 2 181 7 186 1.08e-54 174
MS.gene055394.t1 AT5G03530 47.030 202 102 4 5 202 10 210 3.44e-53 169
MS.gene055394.t1 AT5G03530 47.030 202 102 4 5 202 10 210 3.44e-53 169
MS.gene055394.t1 AT1G05810 43.269 208 108 2 6 203 10 217 3.84e-53 169
MS.gene055394.t1 AT2G31680 50.955 157 77 0 6 162 10 166 7.67e-53 169
MS.gene055394.t1 AT1G05810 43.269 208 108 2 6 203 56 263 9.08e-53 170
MS.gene055394.t1 AT1G01200 43.284 201 112 2 1 199 21 221 2.32e-49 160
MS.gene055394.t1 AT4G19640 41.837 196 104 3 10 202 12 200 4.95e-46 151
MS.gene055394.t1 AT3G09910 44.335 203 102 5 5 203 10 205 9.53e-46 150
MS.gene055394.t1 AT3G09910 44.335 203 102 5 5 203 10 205 9.53e-46 150
MS.gene055394.t1 AT3G09910 44.335 203 102 5 5 203 10 205 9.53e-46 150
MS.gene055394.t1 AT5G45130 40.306 196 107 2 10 202 12 200 1.93e-44 147
MS.gene055394.t1 AT3G09910 47.953 171 86 3 5 173 10 179 3.46e-44 146
MS.gene055394.t1 AT3G09910 47.953 171 86 3 5 173 10 179 3.46e-44 146
MS.gene055394.t1 AT5G45130 40.415 193 107 3 12 202 22 208 1.07e-42 142
MS.gene055394.t1 AT3G54840 44.805 154 84 1 10 162 35 188 2.26e-42 142
MS.gene055394.t1 AT2G44610 37.073 205 111 2 9 202 10 207 2.85e-42 141
MS.gene055394.t1 AT3G54840 44.805 154 84 1 10 162 35 188 3.06e-42 141
MS.gene055394.t1 AT3G54840 44.444 153 84 1 11 162 2 154 6.64e-42 139
MS.gene055394.t1 AT4G39890 41.358 162 94 1 9 169 10 171 1.03e-41 140
MS.gene055394.t1 AT2G22290 36.500 200 118 2 9 202 10 206 4.47e-41 138
MS.gene055394.t1 AT4G35860 52.500 120 57 0 50 169 2 121 1.87e-40 135
MS.gene055394.t1 AT5G10260 40.994 161 95 0 9 169 10 170 4.77e-40 136
MS.gene055394.t1 AT1G52280 36.715 207 121 4 1 200 1 204 7.07e-40 135
MS.gene055394.t1 AT3G16100 37.500 200 115 4 8 200 8 204 7.80e-40 135
MS.gene055394.t1 AT5G59150 40.244 164 88 1 50 203 3 166 1.90e-39 133
MS.gene055394.t1 AT3G18820 38.500 200 113 4 8 200 8 204 1.24e-38 132
MS.gene055394.t1 AT5G64990 39.759 166 100 0 9 174 8 173 2.15e-38 131
MS.gene055394.t1 AT2G21880 39.759 166 93 3 8 166 9 174 1.93e-36 127
MS.gene055394.t1 AT1G49300 36.000 200 118 4 8 200 8 204 2.47e-36 126
MS.gene055394.t1 AT1G49300 36.000 200 118 4 8 200 8 204 2.47e-36 126
MS.gene055394.t1 AT4G19640 45.038 131 72 0 10 140 12 142 1.28e-35 124
MS.gene055394.t1 AT5G64990 38.150 173 100 1 9 174 8 180 1.29e-35 124
MS.gene055394.t1 AT4G19640 45.600 125 68 0 10 134 12 136 7.28e-35 120
MS.gene055394.t1 AT4G09720 40.361 166 92 3 8 166 8 173 8.73e-34 120
MS.gene055394.t1 AT1G22740 38.182 165 95 3 8 165 8 172 3.60e-33 118
MS.gene055394.t1 AT4G09720 38.012 171 94 3 8 166 8 178 1.12e-31 114
MS.gene055394.t1 AT4G09720 36.723 177 94 3 8 166 8 184 1.05e-30 112
MS.gene055394.t1 AT5G39620 38.922 167 91 3 9 166 6 170 2.07e-30 111
MS.gene055394.t1 AT2G21880 40.876 137 74 3 37 166 13 149 1.65e-28 105
MS.gene055394.t1 AT2G21880 40.876 137 74 3 37 166 13 149 1.65e-28 105
MS.gene055394.t1 AT2G21880 34.940 166 93 4 8 166 9 166 1.26e-26 101
MS.gene055394.t1 AT4G09720 41.606 137 73 3 37 166 3 139 4.20e-26 99.4
MS.gene055394.t1 AT4G09720 41.606 137 73 3 37 166 3 139 4.20e-26 99.4
MS.gene055394.t1 AT4G09720 41.606 137 73 3 37 166 3 139 4.20e-26 99.4
MS.gene055394.t1 AT2G44690 33.533 167 97 5 8 162 18 182 1.13e-24 96.7
MS.gene055394.t1 AT4G35020 35.429 175 96 7 8 170 6 175 2.68e-24 95.1
MS.gene055394.t1 AT4G35020 35.429 175 96 7 8 170 6 175 2.68e-24 95.1
MS.gene055394.t1 AT4G35020 35.429 175 96 7 8 170 6 175 2.68e-24 95.1
MS.gene055394.t1 AT3G51300 35.329 167 94 6 10 164 8 172 5.68e-24 94.4
MS.gene055394.t1 AT2G17800 34.911 169 96 6 8 164 6 172 7.25e-24 94.0
MS.gene055394.t1 AT2G17800 34.911 169 96 6 8 164 6 172 7.25e-24 94.0
MS.gene055394.t1 AT4G35950 34.320 169 97 6 8 164 6 172 2.28e-23 92.8
MS.gene055394.t1 AT4G28950 31.034 203 118 8 8 200 6 196 4.80e-23 92.0
MS.gene055394.t1 AT1G75840 32.571 175 101 6 8 170 6 175 6.30e-23 91.7
MS.gene055394.t1 AT5G55080 30.270 185 114 4 9 189 14 187 3.83e-22 90.1
MS.gene055394.t1 AT5G45970 32.335 167 99 6 8 162 6 170 4.04e-22 89.7
MS.gene055394.t1 AT5G55190 32.609 184 116 5 9 189 14 192 5.43e-22 89.7
MS.gene055394.t1 AT5G46025 42.991 107 60 1 70 175 6 112 5.57e-22 86.7
MS.gene055394.t1 AT3G48040 31.250 176 106 6 8 170 8 181 8.56e-22 89.0
MS.gene055394.t1 AT5G20010 32.065 184 117 5 9 189 14 192 1.40e-21 88.6
MS.gene055394.t1 AT5G20020 31.522 184 118 5 9 189 14 192 1.65e-21 88.6
MS.gene055394.t1 AT1G20090 31.429 175 103 6 8 170 5 174 2.96e-21 87.0
MS.gene055394.t1 AT5G62880 30.539 167 102 5 8 162 8 172 1.03e-19 83.6
MS.gene055394.t1 AT3G48040 31.013 158 95 5 8 153 8 163 1.98e-19 82.0
MS.gene055394.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.47e-18 78.2
MS.gene055394.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.47e-18 78.2
MS.gene055394.t1 AT5G62880 33.333 123 79 3 8 129 8 128 2.73e-18 79.3
MS.gene055394.t1 AT3G51290 35.211 142 78 6 35 164 634 773 1.71e-14 71.6
MS.gene055394.t1 AT5G37680 31.288 163 94 6 9 162 20 173 1.38e-12 63.9
MS.gene055394.t1 AT5G67560 32.051 156 96 5 9 159 20 170 1.97e-11 60.8
MS.gene055394.t1 AT3G49870 32.919 161 88 7 9 159 1 151 3.06e-11 59.7
MS.gene055394.t1 AT2G15310 29.286 140 82 6 10 145 19 145 6.26e-11 59.7
MS.gene055394.t1 AT3G49870 31.677 161 90 7 9 159 20 170 6.61e-11 59.3
MS.gene055394.t1 AT5G64813 22.335 197 115 5 10 170 24 218 6.91e-11 60.8
MS.gene055394.t1 AT5G64813 22.335 197 115 5 10 170 24 218 6.91e-11 60.8
MS.gene055394.t1 AT5G64813 22.335 197 115 5 10 170 24 218 6.91e-11 60.8
MS.gene055394.t1 AT3G22950 30.159 126 80 4 1 125 12 130 8.56e-11 58.9
MS.gene055394.t1 AT3G22950 30.159 126 80 4 1 125 12 130 8.56e-11 58.9

Find 42 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTCAAGCTCCTTCTTAT+TGG 0.139580 8.1:+86710891 MS.gene055394:CDS
TTTGCACTTGTTTCCATAAA+AGG 0.153571 8.1:-86712606 None:intergenic
CTGCCGGGCAAGAACGATTT+AGG 0.303257 8.1:+86712136 MS.gene055394:CDS
TGATAATGTTAACAAGCTTT+TGG 0.346717 8.1:+86712366 MS.gene055394:CDS
CTCCTTCTTATTGGAGACTC+TGG 0.406221 8.1:+86710900 MS.gene055394:CDS
AAATGTGGAAGGAGCATTCA+TGG 0.416001 8.1:+86712638 MS.gene055394:CDS
CCTCCAACAGTGCAGATTAG+AGG 0.441575 8.1:+86713357 MS.gene055394:CDS
CCTCTAATCTGCACTGTTGG+AGG 0.450000 8.1:-86713357 None:intergenic
CTTATTGGAGACTCTGGTGT+TGG 0.464289 8.1:+86710906 MS.gene055394:CDS
TAATGAGCACCTATCCTTGA+TGG 0.471028 8.1:-86712673 None:intergenic
TTCTTGTAGTGGGACACTGC+CGG 0.479251 8.1:+86712120 MS.gene055394:intron
AGCTACTATCGTGGGGCACA+TGG 0.488301 8.1:+86712171 MS.gene055394:CDS
ATCCTTGATGGCAGCAGCCA+TGG 0.490402 8.1:-86712661 None:intergenic
CAGGAATTTGCAGATCAAAT+CGG 0.492691 8.1:+86712579 MS.gene055394:intron
TTCGAACTGTTGAGCAGGAT+GGG 0.495201 8.1:+86711982 MS.gene055394:CDS
AAGCTTGTTAACATTATCAC+TGG 0.500079 8.1:-86712362 None:intergenic
TGTCCTCTAATCTGCACTGT+TGG 0.502752 8.1:-86713360 None:intergenic
TGGAGGCCTTGCATTGTTTG+CGG 0.503248 8.1:-86713340 None:intergenic
GGCCTTGCATTGTTTGCGGA+TGG 0.508567 8.1:-86713336 None:intergenic
GGCCATGGCTGCTGCCATCA+AGG 0.509743 8.1:+86712659 MS.gene055394:CDS
TCTTGTAGTGGGACACTGCC+GGG 0.511489 8.1:+86712121 MS.gene055394:intron
TTGCATTGTTTGCGGATGGT+TGG 0.514800 8.1:-86713332 None:intergenic
TTACAGCAAATCTTAGAAGA+AGG 0.520470 8.1:-86710938 None:intergenic
ATTCGAACTGTTGAGCAGGA+TGG 0.524930 8.1:+86711981 MS.gene055394:CDS
GAAAATTCGAACTGTTGAGC+AGG 0.528077 8.1:+86711977 MS.gene055394:intron
ATTATTGAAGCTCTCTTCAT+CGG 0.536063 8.1:-86712305 None:intergenic
GATAGCTACATAAGCACCAT+TGG 0.541145 8.1:+86711854 MS.gene055394:CDS
CACCAGAGTCTCCAATAAGA+AGG 0.544091 8.1:-86710902 None:intergenic
AACCATCCGCAAACAATGCA+AGG 0.546517 8.1:+86713334 MS.gene055394:CDS
TGGCTGCTGCCATCAAGGAT+AGG 0.548752 8.1:+86712664 MS.gene055394:CDS
TGTCCTAAATCGTTCTTGCC+CGG 0.552890 8.1:-86712139 None:intergenic
TAACCAGTAGCTACTATCGT+GGG 0.574293 8.1:+86712163 MS.gene055394:CDS
TGCCCCACGATAGTAGCTAC+TGG 0.575290 8.1:-86712166 None:intergenic
TGCAAAGGATGCTACAAATG+TGG 0.595953 8.1:+86712623 MS.gene055394:CDS
AAGGATGCTACAAATGTGGA+AGG 0.613051 8.1:+86712627 MS.gene055394:CDS
ACTCACAAAATCAACTCCAA+TGG 0.624945 8.1:-86711870 None:intergenic
GGAAGGAGCATTCATGGCCA+TGG 0.628916 8.1:+86712644 MS.gene055394:CDS
ATAACCAGTAGCTACTATCG+TGG 0.642124 8.1:+86712162 MS.gene055394:CDS
GCTTCAATAATGTGAAGCAG+TGG 0.652698 8.1:+86712317 MS.gene055394:CDS
CAGATTAGAGGACAACCAGT+TGG 0.660940 8.1:+86713369 MS.gene055394:CDS
AACCAGTAGCTACTATCGTG+GGG 0.702592 8.1:+86712164 MS.gene055394:CDS
TAACATTATCACTGGCATAG+CGG 0.705715 8.1:-86712354 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTAAAATTAAATTGAAA+AGG + chr8.1:86710360-86710379 MS.gene055394:intron 10.0%
!!! AATTGTTGTTTTTTTAATTT+GGG + chr8.1:86709866-86709885 MS.gene055394:intron 10.0%
!!! ATGTAAAAATGTTTTTTTAA+TGG + chr8.1:86710322-86710341 MS.gene055394:intron 10.0%
!! AAAATAAAATACTGCAATAT+AGG - chr8.1:86710985-86711004 None:intergenic 15.0%
!! AAATAAATAACCAGTATAAA+AGG - chr8.1:86711069-86711088 None:intergenic 15.0%
!!! ATTGTTGTTTTTTTAATTTG+GGG + chr8.1:86709867-86709886 MS.gene055394:intron 15.0%
!!! ATTTTATGTTTTTCAAAACA+TGG + chr8.1:86710124-86710143 MS.gene055394:intron 15.0%
!!! GAATTGTTGTTTTTTTAATT+TGG + chr8.1:86709865-86709884 MS.gene055394:intron 15.0%
!!! TTTGTTCTTGTTTTTTAAAA+GGG + chr8.1:86709816-86709835 MS.gene055394:intron 15.0%
!!! TTTTGTTCTTGTTTTTTAAA+AGG + chr8.1:86709815-86709834 MS.gene055394:intron 15.0%
!! AAAACATAGTAGTGTATATT+AGG - chr8.1:86712094-86712113 None:intergenic 20.0%
!! AATAATCAAATCTATAATGG+AGG + chr8.1:86711297-86711316 MS.gene055394:intron 20.0%
!! ACAAGAACAAAAATCATAAA+AGG - chr8.1:86709807-86709826 None:intergenic 20.0%
!! ATGGTTTGAATTATTTCAAT+TGG + chr8.1:86710421-86710440 MS.gene055394:intron 20.0%
!! CAAAGTAGAAAAAAAGAAAA+AGG - chr8.1:86709748-86709767 None:intergenic 20.0%
!! CAGAATAATCAAATCTATAA+TGG + chr8.1:86711294-86711313 MS.gene055394:intron 20.0%
!! GTTGAATTAAATCTATGAAT+GGG + chr8.1:86711446-86711465 MS.gene055394:intron 20.0%
!! TTAACTTTATGATATACTAC+AGG + chr8.1:86711817-86711836 MS.gene055394:intron 20.0%
!!! AACTATCAAATCTATTTTGT+AGG + chr8.1:86711321-86711340 MS.gene055394:intron 20.0%
!!! ATAATCAAATCTATAATGGA+GGG + chr8.1:86711298-86711317 MS.gene055394:intron 20.0%
!!! TAAGAGTACTGTTTAAAAAT+TGG + chr8.1:86710509-86710528 MS.gene055394:intron 20.0%
!!! TTAGATTTCAATGCATATTT+TGG + chr8.1:86713130-86713149 MS.gene055394:intron 20.0%
!!! TTTGTTCTTGTTTTTCAAAA+GGG + chr8.1:86709966-86709985 MS.gene055394:intron 20.0%
!!! TTTTAATTTGGGGTTAATTT+GGG + chr8.1:86709877-86709896 MS.gene055394:intron 20.0%
!!! TTTTGTTCTTGTTTTTCAAA+AGG + chr8.1:86709965-86709984 MS.gene055394:intron 20.0%
!!! TTTTGTTTAAAACTGACATA+CGG + chr8.1:86713153-86713172 MS.gene055394:intron 20.0%
!!! TTTTTAATTTGGGGTTAATT+TGG + chr8.1:86709876-86709895 MS.gene055394:intron 20.0%
! AAATAACCAGTATAAAAGGA+TGG - chr8.1:86711065-86711084 None:intergenic 25.0%
! AAGTGATTGTGTTTGATATT+TGG + chr8.1:86710783-86710802 MS.gene055394:intron 25.0%
! ACATAACAACAAAATCAATG+GGG - chr8.1:86711120-86711139 None:intergenic 25.0%
! AGACATAACAACAAAATCAA+TGG - chr8.1:86711122-86711141 None:intergenic 25.0%
! AGATTGTATGTATCTTAGAT+TGG + chr8.1:86712021-86712040 MS.gene055394:intron 25.0%
! AGTTTATCTCTATAGAGAAA+CGG + chr8.1:86710832-86710851 MS.gene055394:intron 25.0%
! ATGATATTATAAGTTCAGAC+TGG - chr8.1:86711944-86711963 None:intergenic 25.0%
! CAAAACTATGATAGTACTAT+TGG + chr8.1:86710464-86710483 MS.gene055394:intron 25.0%
! CAAGATATAGAAGATGATAA+TGG - chr8.1:86711543-86711562 None:intergenic 25.0%
! GACATAACAACAAAATCAAT+GGG - chr8.1:86711121-86711140 None:intergenic 25.0%
! GGTTGAATTAAATCTATGAA+TGG + chr8.1:86711445-86711464 MS.gene055394:intron 25.0%
! TAACATTGAATGAGTGTAAT+GGG + chr8.1:86711149-86711168 MS.gene055394:intron 25.0%
! TCAGCTATTCAATAATAAAC+AGG - chr8.1:86712701-86712720 None:intergenic 25.0%
! TTAACATTGAATGAGTGTAA+TGG + chr8.1:86711148-86711167 MS.gene055394:intron 25.0%
! TTAAGTTTGGTTATTCTTTC+TGG - chr8.1:86712795-86712814 None:intergenic 25.0%
! TTTCAATTGGAATTTCATCA+CGG + chr8.1:86710434-86710453 MS.gene055394:intron 25.0%
! TTTGCTAAATCATAAACTCA+AGG - chr8.1:86711665-86711684 None:intergenic 25.0%
!! AAATCTATGAATGGGATTTT+TGG + chr8.1:86711454-86711473 MS.gene055394:intron 25.0%
!! TATTGTGAACTGATTCATAA+TGG + chr8.1:86712960-86712979 MS.gene055394:intron 25.0%
!! TTTGTTTAAAACTGACATAC+GGG + chr8.1:86713154-86713173 MS.gene055394:intron 25.0%
!!! AAACTTTTAAAATCAAGCTC+AGG - chr8.1:86712995-86713014 None:intergenic 25.0%
!!! TATTCTTTCTGGAAGTTTTA+TGG - chr8.1:86712784-86712803 None:intergenic 25.0%
!!! TGATAATGTTAACAAGCTTT+TGG + chr8.1:86712366-86712385 MS.gene055394:CDS 25.0%
!!! TTTGAAATGTACTACGATTT+TGG + chr8.1:86713027-86713046 MS.gene055394:intron 25.0%
AACATTGAATGAGTGTAATG+GGG + chr8.1:86711150-86711169 MS.gene055394:intron 30.0%
AATAGAATCTACAGGTTGTA+AGG + chr8.1:86711362-86711381 MS.gene055394:intron 30.0%
ACCAATTAGACACAATATCA+AGG - chr8.1:86710210-86710229 None:intergenic 30.0%
ACCTTGATATTGTGTCTAAT+TGG + chr8.1:86710206-86710225 MS.gene055394:intron 30.0%
ATAGATCTTGAGGAAATATC+AGG + chr8.1:86711599-86711618 MS.gene055394:intron 30.0%
ATTATTGAAGCTCTCTTCAT+CGG - chr8.1:86712308-86712327 None:intergenic 30.0%
ATTCACGATGAAGTTAAACA+AGG - chr8.1:86713299-86713318 None:intergenic 30.0%
CCACAATAAGAGTTTAAACA+TGG + chr8.1:86712217-86712236 MS.gene055394:intron 30.0%
CCATGTTTAAACTCTTATTG+TGG - chr8.1:86712220-86712239 None:intergenic 30.0%
TACAAACCTTAATGGAATCA+TGG + chr8.1:86710402-86710421 MS.gene055394:intron 30.0%
TAGAGAATGAAAAACACAAC+AGG - chr8.1:86712249-86712268 None:intergenic 30.0%
TATAAAAGGATGGAGAAACA+TGG - chr8.1:86711055-86711074 None:intergenic 30.0%
TCTCTAATAACATGTTCCTT+TGG + chr8.1:86712263-86712282 MS.gene055394:intron 30.0%
TGATATTTCCTCAAGATCTA+TGG - chr8.1:86711600-86711619 None:intergenic 30.0%
TTACAGCAAATCTTAGAAGA+AGG - chr8.1:86710941-86710960 None:intergenic 30.0%
TTCAAACCATGATTCCATTA+AGG - chr8.1:86710411-86710430 None:intergenic 30.0%
TTGCATGATACAAACCTTAA+TGG + chr8.1:86710394-86710413 MS.gene055394:intron 30.0%
TTGTTCAGTAGTGAAAAAGT+CGG - chr8.1:86713265-86713284 None:intergenic 30.0%
TTTAGCAAAATCGTCTTATC+TGG + chr8.1:86711676-86711695 MS.gene055394:intron 30.0%
TTTGCACTTGTTTCCATAAA+AGG - chr8.1:86712609-86712628 None:intergenic 30.0%
! AATGTTAACAAGCTTTTGGT+TGG + chr8.1:86712370-86712389 MS.gene055394:CDS 30.0%
! ATGTACTACGATTTTGGATT+TGG + chr8.1:86713033-86713052 MS.gene055394:intron 30.0%
! GAAAAAGGTACATACTATTC+AGG - chr8.1:86709733-86709752 None:intergenic 30.0%
! GAGTACTGTTTAAAAATTGG+TGG + chr8.1:86710512-86710531 MS.gene055394:intron 30.0%
! TATTTTGTGCTGTGTATTTC+TGG + chr8.1:86711722-86711741 MS.gene055394:intron 30.0%
! TTTTATGGAAACAAGTGCAA+AGG + chr8.1:86712608-86712627 MS.gene055394:CDS 30.0%
! TTTTGATCTGTTCTTGTAGT+GGG + chr8.1:86712110-86712129 MS.gene055394:intron 30.0%
!! AAGCTTGTTAACATTATCAC+TGG - chr8.1:86712365-86712384 None:intergenic 30.0%
!! TGATTTAGCTTGAACTCATT+TGG + chr8.1:86711908-86711927 MS.gene055394:intron 30.0%
!!! GTCAACTTTTTTGAAAGCTT+TGG - chr8.1:86712899-86712918 None:intergenic 30.0%
!!! TGTTTTTTACAACCCTAGAT+TGG + chr8.1:86710061-86710080 MS.gene055394:intron 30.0%
AACCAGTTGGTCAAAAAAGT+GGG + chr8.1:86713382-86713401 MS.gene055394:CDS 35.0%
AACTAAAGCATGCATGCATA+TGG + chr8.1:86710248-86710267 MS.gene055394:intron 35.0%
AAGGCATGGTACATTAAACT+TGG - chr8.1:86712747-86712766 None:intergenic 35.0%
AAGGTAGGAATAGAATCTAC+AGG + chr8.1:86711268-86711287 MS.gene055394:intron 35.0%
ACTCACAAAATCAACTCCAA+TGG - chr8.1:86711873-86711892 None:intergenic 35.0%
ACTTCATCGTGAATGTAGAA+TGG + chr8.1:86713305-86713324 MS.gene055394:intron 35.0%
CAGGAATTTGCAGATCAAAT+CGG + chr8.1:86712579-86712598 MS.gene055394:intron 35.0%
CATCATAAACAATCTGCCAA+AGG - chr8.1:86712282-86712301 None:intergenic 35.0%
GTTAAACCTGAACGAAGAAA+AGG + chr8.1:86711209-86711228 MS.gene055394:intron 35.0%
TAACATTATCACTGGCATAG+CGG - chr8.1:86712357-86712376 None:intergenic 35.0%
TAGTTTCTCCATAGATCTTG+AGG + chr8.1:86711589-86711608 MS.gene055394:intron 35.0%
TGAACAGATAATCACTGCAA+AGG - chr8.1:86710878-86710897 None:intergenic 35.0%
TGTATTGTGCAGCAGTATTA+TGG - chr8.1:86711784-86711803 None:intergenic 35.0%
TGTTCAGTAGTGAAAAAGTC+GGG - chr8.1:86713264-86713283 None:intergenic 35.0%
! AGAGAGAAAAAAAGAGTGTG+AGG - chr8.1:86712555-86712574 None:intergenic 35.0%
! GTTTCTCCATCCTTTTATAC+TGG + chr8.1:86711056-86711075 MS.gene055394:intron 35.0%
! TCAAATCGGCATACCTTTTA+TGG + chr8.1:86712593-86712612 MS.gene055394:CDS 35.0%
!! GTTTTGATCTGTTCTTGTAG+TGG + chr8.1:86712109-86712128 MS.gene055394:intron 35.0%
!! TCTATGAATGGGATTTTTGG+AGG + chr8.1:86711457-86711476 MS.gene055394:intron 35.0%
!! TTTTGTAGGAGAAGTGTGTA+AGG + chr8.1:86711249-86711268 MS.gene055394:intron 35.0%
!!! TCTTTTTTTCTCTCTATCGC+AGG + chr8.1:86712560-86712579 MS.gene055394:intron 35.0%
AAATCTGGACCGTCTAATCT+CGG + chr8.1:86713181-86713200 MS.gene055394:intron 40.0%
AACGAAGAAAAGGACATGAC+GGG + chr8.1:86711219-86711238 MS.gene055394:intron 40.0%
AAGGATGCTACAAATGTGGA+AGG + chr8.1:86712627-86712646 MS.gene055394:CDS 40.0%
AATGGAGACACCTAACATTG+GGG - chr8.1:86712859-86712878 None:intergenic 40.0%
AATGTTAGGTGTCTCCATTG+TGG + chr8.1:86712860-86712879 MS.gene055394:intron 40.0%
ACAATGGAGACACCTAACAT+TGG - chr8.1:86712861-86712880 None:intergenic 40.0%
ATAACCAGTAGCTACTATCG+TGG + chr8.1:86712162-86712181 MS.gene055394:CDS 40.0%
ATCCATACATTCATGCAGTC+AGG + chr8.1:86713073-86713092 MS.gene055394:intron 40.0%
ATTCATGCAGACAGAGATGT+CGG - chr8.1:86713218-86713237 None:intergenic 40.0%
CAACCAGTTGGTCAAAAAAG+TGG + chr8.1:86713381-86713400 MS.gene055394:CDS 40.0%
CAATGGAGACACCTAACATT+GGG - chr8.1:86712860-86712879 None:intergenic 40.0%
CACAAAGCTGATCCAATCTA+GGG - chr8.1:86710076-86710095 None:intergenic 40.0%
CTGTTCAAGCTCCTTCTTAT+TGG + chr8.1:86710891-86710910 MS.gene055394:CDS 40.0%
GAAAATTCGAACTGTTGAGC+AGG + chr8.1:86711977-86711996 MS.gene055394:intron 40.0%
GAACGAAGAAAAGGACATGA+CGG + chr8.1:86711218-86711237 MS.gene055394:intron 40.0%
GAATCTACAGGTTGTAAGGT+AGG + chr8.1:86711366-86711385 MS.gene055394:intron 40.0%
GATAGCTACATAAGCACCAT+TGG + chr8.1:86711854-86711873 MS.gene055394:CDS 40.0%
GCTTCAATAATGTGAAGCAG+TGG + chr8.1:86712317-86712336 MS.gene055394:CDS 40.0%
GTCTGTGTTCGTGTTTACTT+CGG + chr8.1:86712501-86712520 MS.gene055394:intron 40.0%
TAACCAGTAGCTACTATCGT+GGG + chr8.1:86712163-86712182 MS.gene055394:CDS 40.0%
TAATGAGCACCTATCCTTGA+TGG - chr8.1:86712676-86712695 None:intergenic 40.0%
TCACAAAGCTGATCCAATCT+AGG - chr8.1:86710077-86710096 None:intergenic 40.0%
TCCATACATTCATGCAGTCA+GGG + chr8.1:86713074-86713093 MS.gene055394:intron 40.0%
TGCAAAGGATGCTACAAATG+TGG + chr8.1:86712623-86712642 MS.gene055394:CDS 40.0%
! AAAAAGAGTGTGAGGTCTTC+TGG - chr8.1:86712547-86712566 None:intergenic 40.0%
! GCAGTATTATGGAAGCGTAA+AGG - chr8.1:86711773-86711792 None:intergenic 40.0%
! GGCACTGAAGAACAAAGTTA+GGG - chr8.1:86711644-86711663 None:intergenic 40.0%
! GTTGCTTCTTGTTTCTCACA+AGG + chr8.1:86710281-86710300 MS.gene055394:intron 40.0%
! TCATGTCCTTTTCTTCGTTC+AGG - chr8.1:86711218-86711237 None:intergenic 40.0%
! TGACGGGACAGAAATTTTGT+AGG + chr8.1:86711235-86711254 MS.gene055394:intron 40.0%
! TGCATGAATGTATGGATTGC+TGG - chr8.1:86713070-86713089 None:intergenic 40.0%
! TGTAATGGGGTTCTTGCTAT+TGG + chr8.1:86711163-86711182 MS.gene055394:intron 40.0%
!! AAATGTGGAAGGAGCATTCA+TGG + chr8.1:86712638-86712657 MS.gene055394:CDS 40.0%
!! AATGGGATTTTTGGAGGCTT+AGG + chr8.1:86711463-86711482 MS.gene055394:intron 40.0%
!! AGGCACTGAAGAACAAAGTT+AGG - chr8.1:86711645-86711664 None:intergenic 40.0%
!! ATGTACCATGCCTTTGAAGT+AGG + chr8.1:86712753-86712772 MS.gene055394:intron 40.0%
!! ATTTTTGGAGGCTTAGGCTT+TGG + chr8.1:86711469-86711488 MS.gene055394:intron 40.0%
!! CTTGGGTTTTGTAAGACCTT+GGG - chr8.1:86712822-86712841 None:intergenic 40.0%
!! GAAACTAAGAGCATCCACAA+TGG - chr8.1:86712877-86712896 None:intergenic 40.0%
!! GTAATGGGGTTCTTGCTATT+GGG + chr8.1:86711164-86711183 MS.gene055394:intron 40.0%
!! TAAGGTAGGCATTGATGACA+TGG + chr8.1:86711380-86711399 MS.gene055394:intron 40.0%
!! TTGGGTTTTGTAAGACCTTG+GGG - chr8.1:86712821-86712840 None:intergenic 40.0%
!! TTGTGCTGTGTATTTCTGGA+AGG + chr8.1:86711726-86711745 MS.gene055394:intron 40.0%
AACCAAACTTAAGACCCCCA+AGG + chr8.1:86712803-86712822 MS.gene055394:intron 45.0%
AACCAGTAGCTACTATCGTG+GGG + chr8.1:86712164-86712183 MS.gene055394:CDS 45.0%
AACCATCCGCAAACAATGCA+AGG + chr8.1:86713334-86713353 MS.gene055394:CDS 45.0%
AGGTGGAGGGAATATAATGG+AGG + chr8.1:86711403-86711422 MS.gene055394:intron 45.0%
ATGGAGACACCTAACATTGG+GGG - chr8.1:86712858-86712877 None:intergenic 45.0%
ATTCGAACTGTTGAGCAGGA+TGG + chr8.1:86711981-86712000 MS.gene055394:CDS 45.0%
CACCAGAGTCTCCAATAAGA+AGG - chr8.1:86710905-86710924 None:intergenic 45.0%
CACTTAAGACCCCCAATGTT+AGG + chr8.1:86712846-86712865 MS.gene055394:intron 45.0%
CAGATTAGAGGACAACCAGT+TGG + chr8.1:86713369-86713388 MS.gene055394:CDS 45.0%
CCAAGGTCTTACAAAACCCA+AGG + chr8.1:86712820-86712839 MS.gene055394:intron 45.0%
CTCCTTCTTATTGGAGACTC+TGG + chr8.1:86710900-86710919 MS.gene055394:CDS 45.0%
CTTATTGGAGACTCTGGTGT+TGG + chr8.1:86710906-86710925 MS.gene055394:CDS 45.0%
TAATGGAGGGAACTGGACTA+GGG + chr8.1:86711417-86711436 MS.gene055394:intron 45.0%
TATGGCTGAGCCTACTTCAA+AGG - chr8.1:86712766-86712785 None:intergenic 45.0%
TCCCTGACTGCATGAATGTA+TGG - chr8.1:86713078-86713097 None:intergenic 45.0%
TCTCTGTCTGCATGAATGTG+TGG + chr8.1:86713221-86713240 MS.gene055394:intron 45.0%
TGACATACGGGCTTGAAATC+TGG + chr8.1:86713166-86713185 MS.gene055394:intron 45.0%
TGGAGGTGGAGGGAATATAA+TGG + chr8.1:86711400-86711419 MS.gene055394:intron 45.0%
TGTCCTAAATCGTTCTTGCC+CGG - chr8.1:86712142-86712161 None:intergenic 45.0%
TGTCCTCTAATCTGCACTGT+TGG - chr8.1:86713363-86713382 None:intergenic 45.0%
TTCGAACTGTTGAGCAGGAT+GGG + chr8.1:86711982-86712001 MS.gene055394:CDS 45.0%
TTGCATTGTTTGCGGATGGT+TGG - chr8.1:86713335-86713354 None:intergenic 45.0%
! ATAATGGAGGGAACTGGACT+AGG + chr8.1:86711416-86711435 MS.gene055394:intron 45.0%
! ATTGATGACATGGAGGTGGA+GGG + chr8.1:86711390-86711409 MS.gene055394:intron 45.0%
! GGGAATATAATGGAGGGAAC+TGG + chr8.1:86711410-86711429 MS.gene055394:intron 45.0%
! GGTGGAGGGAATATAATGGA+GGG + chr8.1:86711404-86711423 MS.gene055394:intron 45.0%
! GTAGGAGAAGTGTGTAAGGT+AGG + chr8.1:86711253-86711272 MS.gene055394:intron 45.0%
! GTTCAGGTTTAACCGCACAT+TGG - chr8.1:86711202-86711221 None:intergenic 45.0%
!! CCTTGGGTTTTGTAAGACCT+TGG - chr8.1:86712823-86712842 None:intergenic 45.0%
!! TGGGTTTTGTAAGACCTTGG+GGG - chr8.1:86712820-86712839 None:intergenic 45.0%
!!! CACCCACTTTTTTGACCAAC+TGG - chr8.1:86713387-86713406 None:intergenic 45.0%
CATGCAGTCAGGGACATTGA+CGG + chr8.1:86713084-86713103 MS.gene055394:intron 50.0%
CCTCCAACAGTGCAGATTAG+AGG + chr8.1:86713357-86713376 MS.gene055394:CDS 50.0%
CCTCTAATCTGCACTGTTGG+AGG - chr8.1:86713360-86713379 None:intergenic 50.0%
CCTGATTAGCGTCCAATGTG+CGG + chr8.1:86711187-86711206 MS.gene055394:intron 50.0%
CTGAGCCTACTTCAAAGGCA+TGG - chr8.1:86712761-86712780 None:intergenic 50.0%
GACCTTGGGGGTCTTAAGTT+TGG - chr8.1:86712808-86712827 None:intergenic 50.0%
GGGGTCTTAAGTGAGACCTT+GGG - chr8.1:86712839-86712858 None:intergenic 50.0%
GTCGTTGGACCGAGATTAGA+CGG - chr8.1:86713193-86713212 None:intergenic 50.0%
TGGAGGCCTTGCATTGTTTG+CGG - chr8.1:86713343-86713362 None:intergenic 50.0%
! AATGGAGGGAACTGGACTAG+GGG + chr8.1:86711418-86711437 MS.gene055394:intron 50.0%
! CATTGATGACATGGAGGTGG+AGG + chr8.1:86711389-86711408 MS.gene055394:intron 50.0%
! TTCTTGTAGTGGGACACTGC+CGG + chr8.1:86712120-86712139 MS.gene055394:intron 50.0%
!! AGGCATTGATGACATGGAGG+TGG + chr8.1:86711386-86711405 MS.gene055394:intron 50.0%
!! GGTAGGCATTGATGACATGG+AGG + chr8.1:86711383-86711402 MS.gene055394:intron 50.0%
ACAGAGATGTCGGTGGTCGT+TGG - chr8.1:86713208-86713227 None:intergenic 55.0%
AGCTACTATCGTGGGGCACA+TGG + chr8.1:86712171-86712190 MS.gene055394:CDS 55.0%
CATGCAGACAGAGATGTCGG+TGG - chr8.1:86713215-86713234 None:intergenic 55.0%
CCGCACATTGGACGCTAATC+AGG - chr8.1:86711190-86711209 None:intergenic 55.0%
CTGCCGGGCAAGAACGATTT+AGG + chr8.1:86712136-86712155 MS.gene055394:CDS 55.0%
GGCCTTGCATTGTTTGCGGA+TGG - chr8.1:86713339-86713358 None:intergenic 55.0%
GGGGGTCTTAAGTGAGACCT+TGG - chr8.1:86712840-86712859 None:intergenic 55.0%
TCAGGGACATTGACGGCTGT+TGG + chr8.1:86713091-86713110 MS.gene055394:intron 55.0%
TGCCCCACGATAGTAGCTAC+TGG - chr8.1:86712169-86712188 None:intergenic 55.0%
TGGCTGCTGCCATCAAGGAT+AGG + chr8.1:86712664-86712683 MS.gene055394:CDS 55.0%
! ATCCTTGATGGCAGCAGCCA+TGG - chr8.1:86712664-86712683 None:intergenic 55.0%
! TCTTGTAGTGGGACACTGCC+GGG + chr8.1:86712121-86712140 MS.gene055394:intron 55.0%
!! GGAAGGAGCATTCATGGCCA+TGG + chr8.1:86712644-86712663 MS.gene055394:CDS 55.0%
! AGGGAACTGGACTAGGGGAG+GGG + chr8.1:86711423-86711442 MS.gene055394:intron 60.0%
! GAGGGAACTGGACTAGGGGA+GGG + chr8.1:86711422-86711441 MS.gene055394:intron 60.0%
GGCCATGGCTGCTGCCATCA+AGG + chr8.1:86712659-86712678 MS.gene055394:CDS 65.0%
! GGAGGGAACTGGACTAGGGG+AGG + chr8.1:86711421-86711440 MS.gene055394:intron 65.0%
! GGGAACTGGACTAGGGGAGG+GGG + chr8.1:86711424-86711443 MS.gene055394:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 86709724 86713419 86709724 ID=MS.gene055394
chr8.1 mRNA 86709724 86713419 86709724 ID=MS.gene055394.t1;Parent=MS.gene055394
chr8.1 exon 86709724 86709737 86709724 ID=MS.gene055394.t1.exon1;Parent=MS.gene055394.t1
chr8.1 CDS 86709724 86709737 86709724 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
chr8.1 exon 86710884 86710956 86710884 ID=MS.gene055394.t1.exon2;Parent=MS.gene055394.t1
chr8.1 CDS 86710884 86710956 86710884 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
chr8.1 exon 86711839 86711886 86711839 ID=MS.gene055394.t1.exon3;Parent=MS.gene055394.t1
chr8.1 CDS 86711839 86711886 86711839 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
chr8.1 exon 86711978 86712025 86711978 ID=MS.gene055394.t1.exon4;Parent=MS.gene055394.t1
chr8.1 CDS 86711978 86712025 86711978 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
chr8.1 exon 86712129 86712200 86712129 ID=MS.gene055394.t1.exon5;Parent=MS.gene055394.t1
chr8.1 CDS 86712129 86712200 86712129 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
chr8.1 exon 86712289 86712444 86712289 ID=MS.gene055394.t1.exon6;Parent=MS.gene055394.t1
chr8.1 CDS 86712289 86712444 86712289 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
chr8.1 exon 86712582 86712685 86712582 ID=MS.gene055394.t1.exon7;Parent=MS.gene055394.t1
chr8.1 CDS 86712582 86712685 86712582 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
chr8.1 exon 86713323 86713419 86713323 ID=MS.gene055394.t1.exon8;Parent=MS.gene055394.t1
chr8.1 CDS 86713323 86713419 86713323 ID=cds.MS.gene055394.t1;Parent=MS.gene055394.t1
Gene Sequence

>MS.gene055394

ATGAATCCTGAATAGTATGTACCTTTTTCTTTTTTTCTACTTTGAATTTTCAATTTCTTCAATTGTAATAAATTTCACTCTTTTTTATGATTTTTGTTCTTGTTTTTTAAAAGGGTAGCTATGATTGTGTTTAATTTGTGTGAATTGTTGTTTTTTTAATTTGGGGTTAATTTGGGTCGAATAGTAAAAAAAATCTACTTTTGATTGTTTCAATTGACAGAAATTTTACTCCTTTTATGATTTTTGTTCTTGTTTTTCAAAAGGGTATCTATGATTATGTTTAATATGAGTGAATTGTTGTTTTTTGAGATTAATTACTTAATTTGTGTTGAATTTTTGTTTTTTACAACCCTAGATTGGATCAGCTTTGTGAATTACTCGATTAACTTTTTTTAATTCAATTTTATGTTTTTCAAAACATGGATTACATGATTTTATATTATTTTATTTGTTTATTGATTGATTTTGAAAGTGATGAGTTTACCTTGATATTGTGTCTAATTGGTTTTAAATTTCAATTGAGTAACTAAAGCATGCATGCATATGGCTCTGTTTTTGTTGCTTCTTGTTTCTCACAAGGACTTGATCGTACAATTCAATGTAAAAATGTTTTTTTAATGGTAATTCAATATAAAAATGTTAAAATTAAATTGAAAAGGAGAAGCTTTTTTTGCATGATACAAACCTTAATGGAATCATGGTTTGAATTATTTCAATTGGAATTTCATCACGGAAATCATCAAAACTATGATAGTACTATTGGCTTGTGCTTTCTTATGTGAGTTTAAGAGTACTGTTTAAAAATTGGTGGAAAATATTTGTCTATAACTCGACATGTCTCATATACTTGAAACGTAAATACTAAATACATCAATTTGTTGATTTATGTATTTGCATTATAATTTGAATGTAAGAATTTGACAAAATATTGATTTGTATTTTAGAATTTTTAATATTCATGACTTCGATTGATTTAAGTTTTATTTGCTTTTAGTGTCTGAAGACTTTTGAAGTTTTCATCGTCGTCGTAATAAATGTATATACTTGTATGCGTAGATGAAGTGATTGTGTTTGATATTTGGTTGATTTTTTACATTTGATTATTATTAGTTTATCTCTATAGAGAAACGGAGTAAGTATGCTATGCTTGTCCTTTGCAGTGATTATCTGTTCAAGCTCCTTCTTATTGGAGACTCTGGTGTTGGTAAATCATGCCTTCTTCTAAGATTTGCTGTAAGCTATCTACTGTTTGTCTAATCCTATATTGCAGTATTTTATTTTATTGAACAATATATTGCAGTATTTTATTATTTTCTTCTTCTATGTTACCATGTTTCTCCATCCTTTTATACTGGTTATTTATTTATCAAACAGATTTACTCGCATTTTGTATCCCCATTGATTTTGTTGTTATGTCTAGATTATTAACATTGAATGAGTGTAATGGGGTTCTTGCTATTGGGCCTGATTAGCGTCCAATGTGCGGTTAAACCTGAACGAAGAAAAGGACATGACGGGACAGAAATTTTGTAGGAGAAGTGTGTAAGGTAGGAATAGAATCTACAGGTTGCAGAATAATCAAATCTATAATGGAGGGAACTATCAAATCTATTTTGTAGGAGAAGTGTGTAAGGTAGGAATAGAATCTACAGGTTGTAAGGTAGGCATTGATGACATGGAGGTGGAGGGAATATAATGGAGGGAACTGGACTAGGGGAGGGGGTTGAATTAAATCTATGAATGGGATTTTTGGAGGCTTAGGCTTTGGTCTAGAATTAGAGCAACTTATGCTTCTAAGTCTATCGTTTTTCTTTTTCCATTATCATCTTCTATATCTTGCTTTGTTACTAGAATTAAAACATCTATAGTTTCTCCATAGATCTTGAGGAAATATCAGGATCTATCAATGTGCTTCTTCCCTAACTTTGTTCTTCAGTGCCTTGAGTTTATGATTTAGCAAAATCGTCTTATCTGGCTGTGTAAGCTCATGTCTTGTGTTATTTTGTGCTGTGTATTTCTGGAAGGTTTTAACTTCTAACTTGAACTCCTTTACGCTTCCATAATACTGCTGCACAATACAGTAATTTAAATTATTAACTTTATGATATACTACAGGATGATTCATACATTGATAGCTACATAAGCACCATTGGAGTTGATTTTGTGAGTACAACATTTCAAATCTGATTTAGCTTGAACTCATTTGGAATTGTGTCTCCAGTCTGAACTTATAATATCATGTTCTTTTGTACAGAAAATTCGAACTGTTGAGCAGGATGGGAAGACAATTAAGCTACAGATTGTATGTATCTTAGATTGGCTCTGTTCTTCTGCTTCTTTATTTGTTAATACTATACTTTTAGTAAACCTAATATACACTACTATGTTTTGATCTGTTCTTGTAGTGGGACACTGCCGGGCAAGAACGATTTAGGACAATAACCAGTAGCTACTATCGTGGGGCACATGGAATCATTGTGAGTGATGTTTTTACCACAATAAGAGTTTAAACATGGAACACTCCTGTTGTGTTTTTCATTCTCTAATAACATGTTCCTTTGGCAGATTGTTTATGATGTGACCGATGAAGAGAGCTTCAATAATGTGAAGCAGTGGCTCAGTGAAATTGACCGCTATGCCAGTGATAATGTTAACAAGCTTTTGGTTGGAAACAAGAGTGATCTGACAGCAAATAGAGCTGTCTCATATGATACAGCTAAAGTATAAATTTGATATATGTCACATTTTTTTCTTATTAAGAAAATAGTTTTTAGTGTGTCTGTGTTCGTGTTTACTTCGGATAATGTGCATGCTTATGCTCCAGAAGACCTCACACTCTTTTTTTCTCTCTATCGCAGGAATTTGCAGATCAAATCGGCATACCTTTTATGGAAACAAGTGCAAAGGATGCTACAAATGTGGAAGGAGCATTCATGGCCATGGCTGCTGCCATCAAGGATAGGTGCTCATTATTCCTGTTTATTATTGAATAGCTGATATTAAAAAATTAAATTAAATCACCAAGTTTAATGTACCATGCCTTTGAAGTAGGCTCAGCCATAAAACTTCCAGAAAGAATAACCAAACTTAAGACCCCCAAGGTCTTACAAAACCCAAGGTCTCACTTAAGACCCCCAATGTTAGGTGTCTCCATTGTGGATGCTCTTAGTTTCCAAAGCTTTCAAAAAAGTTGACTACAAATGAAGTTCAAATGTCAAATCATATTGTGTGTTTTATATTGTGAACTGATTCATAATGGTTGTTGTTTCCTGAGCTTGATTTTAAAAGTTTTGCTTGATTTCTTTTGAAATGTACTACGATTTTGGATTTGGATTAGTTTCTGCCAGCAATCCATACATTCATGCAGTCAGGGACATTGACGGCTGTTGGATCGATATCTGACAGTTTAGATTTCAATGCATATTTTGGTTTTGTTTAAAACTGACATACGGGCTTGAAATCTGGACCGTCTAATCTCGGTCCAACGACCACCGACATCTCTGTCTGCATGAATGTGTGGATTGCTGACTGAACAAACCCGACTTTTTCACTACTGAACAATTTATTTATCACCTTGTTTAACTTCATCGTGAATGTAGAATGGCGAGCCAACCATCCGCAAACAATGCAAGGCCTCCAACAGTGCAGATTAGAGGACAACCAGTTGGTCAAAAAAGTGGGTGCTGCTCTTCCTAA
Protein sequence

>MS.gene055394.t1

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNARPPTVQIRGQPVGQKSGCCSS