AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58033


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58033.t1 MTR_4g115420 99.435 531 3 0 1 531 1 531 0.0 1097
MS.gene58033.t1 MTR_4g127440 46.597 573 255 12 4 527 2 572 4.01e-156 457
MS.gene58033.t1 MTR_2g037980 62.975 316 104 2 4 307 2 316 4.15e-141 420
MS.gene58033.t1 MTR_0530s0020 42.086 537 258 13 9 520 1 509 5.75e-129 387
MS.gene58033.t1 MTR_4g114960 28.477 604 340 14 7 530 4 595 3.34e-70 236
MS.gene58033.t1 MTR_2g008170 30.729 576 304 13 7 499 4 567 2.99e-66 226
MS.gene58033.t1 MTR_8g008860 30.399 602 325 20 5 527 2 588 7.64e-66 224
MS.gene58033.t1 MTR_3g080490 34.868 304 183 4 9 300 5 305 4.10e-60 214
MS.gene58033.t1 MTR_3g106900 46.053 152 79 2 5 155 2 151 5.46e-38 148
MS.gene58033.t1 MTR_3g106900 28.186 408 233 12 172 530 227 623 9.65e-25 108
MS.gene58033.t1 MTR_8g106040 30.225 311 197 8 9 303 5 311 1.02e-36 141
MS.gene58033.t1 MTR_6g059380 25.784 287 184 7 1 272 1 273 1.05e-19 92.8
MS.gene58033.t1 MTR_1g033880 24.522 314 212 12 10 310 8 309 2.19e-18 87.4
MS.gene58033.t1 MTR_3g086670 26.316 323 207 13 6 315 2 306 1.03e-17 84.7
MS.gene58033.t1 MTR_8g089850 27.230 213 137 7 5 207 2 206 5.60e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58033.t1 AT5G35200 67.407 540 147 11 9 529 11 540 0.0 712
MS.gene58033.t1 AT5G35200 67.407 540 147 11 9 529 11 540 0.0 712
MS.gene58033.t1 AT2G01600 49.460 556 219 12 4 519 2 535 2.94e-164 478
MS.gene58033.t1 AT4G25940 51.233 527 208 9 5 483 3 528 3.31e-161 471
MS.gene58033.t1 AT1G14910 48.998 549 228 13 4 519 2 531 2.22e-158 468
MS.gene58033.t1 AT1G14910 48.270 549 227 14 4 519 2 526 1.67e-152 452
MS.gene58033.t1 AT5G57200 64.669 317 100 2 4 309 2 317 1.07e-144 429
MS.gene58033.t1 AT1G03050 32.192 584 294 18 7 505 4 570 5.52e-73 243
MS.gene58033.t1 AT4G02650 28.693 589 335 12 9 518 6 588 2.35e-63 218
MS.gene58033.t1 AT4G32285 28.670 579 315 8 8 492 4 578 1.16e-62 216
MS.gene58033.t1 AT4G32285 28.670 579 315 8 8 492 4 578 1.16e-62 216
MS.gene58033.t1 AT1G05020 31.595 326 187 4 9 300 5 328 9.69e-56 198
MS.gene58033.t1 AT2G25430 46.980 149 76 2 8 155 4 150 4.39e-38 148
MS.gene58033.t1 AT2G25430 26.912 353 224 4 172 492 247 597 1.12e-23 105
MS.gene58033.t1 AT1G33340 24.910 277 187 8 9 272 9 277 8.40e-19 88.6
MS.gene58033.t1 AT1G25240 24.579 297 203 7 10 298 6 289 3.78e-17 84.0
MS.gene58033.t1 AT1G25240 24.579 297 203 7 10 298 5 288 4.63e-17 83.6
MS.gene58033.t1 AT4G40080 30.097 206 120 7 4 190 2 202 7.47e-16 79.7
MS.gene58033.t1 AT1G68110 22.742 299 210 9 10 298 5 292 7.86e-14 73.6
MS.gene58033.t1 AT2G01920 23.052 308 184 11 10 303 9 277 3.07e-11 65.1

Find 139 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAAGAACTCATTAATTA+TGG 0.161452 8.3:+11330059 MS.gene58033:CDS
CAGCTTCTCTATCGAGTTAT+TGG 0.162944 8.3:+11330635 MS.gene58033:CDS
TCAATAGCCAAAACTTCTTT+TGG 0.225329 8.3:-11331799 None:intergenic
ATGGATTATAGCTAGCATTT+TGG 0.247934 8.3:-11333402 None:intergenic
TGCTGCTCCAAAAGAAGTTT+TGG 0.257824 8.3:+11331792 MS.gene58033:CDS
CAACAATCTGCAAATCCTTT+TGG 0.269633 8.3:+11333595 MS.gene58033:CDS
GCACGTTCCTCCTTCACTTC+TGG 0.277152 8.3:-11331835 None:intergenic
CGAATGTGTTTCTCCTTAGC+TGG 0.277512 8.3:-11329033 None:intergenic
TGTTCCAGCTGCTGCAGAAT+TGG 0.309206 8.3:+11332069 MS.gene58033:CDS
TTTGGCTATTGAATACAATA+AGG 0.318480 8.3:+11331810 MS.gene58033:CDS
ACAACCACCACCTGAACTTT+TGG 0.320948 8.3:+11331909 MS.gene58033:CDS
ATATGCCGTAATCTTGATAT+TGG 0.321801 8.3:+11331224 MS.gene58033:CDS
TTCGGCAGTATCCAAATCTT+TGG 0.326491 8.3:-11330585 None:intergenic
GTCACAGAGGACCAAAGATT+TGG 0.328855 8.3:+11330574 MS.gene58033:intron
TAGTGATGGAACTGTTAATA+TGG 0.357056 8.3:+11330937 MS.gene58033:CDS
GTATATATCAAGAGCTTTCA+AGG 0.370309 8.3:-11331069 None:intergenic
CCAGCCGGTGCTTGCTCCCA+TGG 0.373647 8.3:-11333421 None:intergenic
TGGAACCGCTGGGTGGGAAT+TGG 0.379150 8.3:+11332795 MS.gene58033:CDS
AAAAGCACTTGGAGCTCTTA+AGG 0.379703 8.3:+11328819 MS.gene58033:CDS
ATTAACAGTTCCATCACTAA+TGG 0.385098 8.3:-11330933 None:intergenic
TGCTGCAGCAGCTAGCAAAT+TGG 0.394294 8.3:+11332849 MS.gene58033:CDS
ATGAAGAACTCATTAATTAT+GGG 0.394956 8.3:+11330060 MS.gene58033:CDS
GCTGTTTCAAATCATGCAAA+TGG 0.395050 8.3:+11332775 MS.gene58033:CDS
TCTTCCAATTCTGCAGCAGC+TGG 0.400965 8.3:-11332073 None:intergenic
TTGGCTTTAGCCATCGTTCC+CGG 0.405036 8.3:+11332106 MS.gene58033:CDS
GATTATCAAAGACACATAAC+TGG 0.406456 8.3:+11329453 MS.gene58033:CDS
CTTTCGAACTATTGCTCCCT+GGG 0.408339 8.3:-11331426 None:intergenic
ATACAGAAGGGTTGGGCTGC+AGG 0.411427 8.3:+11331088 MS.gene58033:CDS
TGGTATTCAGGCTGGAGGTT+TGG 0.422718 8.3:+11333330 MS.gene58033:intron
AACTGTTAATATGGTTGATA+AGG 0.423678 8.3:+11330946 MS.gene58033:CDS
TTCTCAGTGCATCATCATAT+AGG 0.427987 8.3:-11333372 None:intergenic
GGTGGTGTTTCCACTTTCAC+AGG 0.433455 8.3:-11331883 None:intergenic
AATTCTGCAGCAGCTGGAAC+AGG 0.433629 8.3:-11332067 None:intergenic
GATACATGAAAGACTGTTGC+TGG 0.435439 8.3:-11333534 None:intergenic
CTATCGAGTTATTGGTTGCC+AGG 0.437344 8.3:+11330643 MS.gene58033:CDS
TGCTCCACACTCTGTTCAAA+TGG 0.437973 8.3:+11333498 MS.gene58033:CDS
TGGAGCAGCCATTGTATTAG+AGG 0.443445 8.3:-11333482 None:intergenic
ATATTGCAATTAGGTTGCTT+CGG 0.443544 8.3:+11330889 MS.gene58033:intron
ACCGTCTGAACCTGTGAAAG+TGG 0.453685 8.3:+11331873 MS.gene58033:CDS
CCTTTCGAACTATTGCTCCC+TGG 0.454270 8.3:-11331427 None:intergenic
ACAGGTTCAGACGGTGGAGG+GGG 0.472068 8.3:-11331865 None:intergenic
AATCATGCAAATGGAACCGC+TGG 0.473715 8.3:+11332784 MS.gene58033:CDS
CAGCATGGGATTATTCTGCA+TGG 0.479621 8.3:+11330228 MS.gene58033:intron
AAAATGCTAGCTATAATCCA+TGG 0.481886 8.3:+11333404 MS.gene58033:CDS
AGTTCAGGTGGTGGTTGTAC+TGG 0.483951 8.3:-11331904 None:intergenic
AGCATGGGATTATTCTGCAT+GGG 0.485591 8.3:+11330229 MS.gene58033:intron
CCATGGGAGCAAGCACCGGC+TGG 0.488834 8.3:+11333421 MS.gene58033:CDS
GCAGCACTTTCATTTGAGCT+AGG 0.489574 8.3:-11332832 None:intergenic
AATGAGTTCTTCATGAAATG+TGG 0.492798 8.3:-11330051 None:intergenic
AGCAATAGTTCGAAAGGATC+AGG 0.493344 8.3:+11331433 MS.gene58033:CDS
GAATGTGTTTCTCCTTAGCT+GGG 0.493431 8.3:-11329032 None:intergenic
CTATGTCAAAGATGCTCCCC+AGG 0.495058 8.3:+11331409 MS.gene58033:CDS
CGTAATCTTGATATTGGACG+TGG 0.495229 8.3:+11331230 MS.gene58033:CDS
CACGTCCAATATCAAGATTA+CGG 0.495283 8.3:-11331229 None:intergenic
AAAGATGACTCGAGTCCAAA+TGG 0.496856 8.3:+11330119 MS.gene58033:CDS
GGACACCACTACTGTCTCAT+TGG 0.499844 8.3:+11328840 MS.gene58033:CDS
TCACAGGTTCAGACGGTGGA+GGG 0.500208 8.3:-11331867 None:intergenic
TCACCGTGCTCTGAGGGAGG+TGG 0.500344 8.3:+11330025 MS.gene58033:CDS
ACAGTTCACCCCTATGGCTC+AGG 0.500843 8.3:+11333637 MS.gene58033:CDS
ATCTTTGACATAGTCTTCCA+TGG 0.501357 8.3:-11331399 None:intergenic
CACAGGTTCAGACGGTGGAG+GGG 0.502984 8.3:-11331866 None:intergenic
ATGGCTTGCATAAACGATGA+TGG 0.503236 8.3:-11331380 None:intergenic
GAAGTTCATCAAAGTTGAGC+AGG 0.504471 8.3:+11331256 MS.gene58033:CDS
AGCGAGAGCATGGATGCAAT+AGG 0.506646 8.3:-11329426 None:intergenic
TGTCATTCACCGTGCTCTGA+GGG 0.508222 8.3:+11330019 MS.gene58033:CDS
CCATATTGAGGATTTCCAAA+AGG 0.508316 8.3:-11333610 None:intergenic
GGATTTGCAGATTGTTGTTG+AGG 0.508477 8.3:-11333589 None:intergenic
TAGAGAAGCTGTTGTAAAGC+TGG 0.511890 8.3:-11330623 None:intergenic
ACAGTAATTACCAAAAGTTC+AGG 0.512616 8.3:-11331919 None:intergenic
TGGCTTGCATAAACGATGAT+GGG 0.513219 8.3:-11331379 None:intergenic
TTGATATATACAGAAGGGTT+GGG 0.514045 8.3:+11331081 MS.gene58033:CDS
TGGCAACTGCTCTAGCAATT+CGG 0.514773 8.3:-11330603 None:intergenic
GGAGCCACAGTTCACCCCTA+TGG 0.518635 8.3:+11333631 MS.gene58033:CDS
CGATCTCAGCTACAAGACCT+AGG 0.519172 8.3:+11329393 MS.gene58033:CDS
CTTGATATATACAGAAGGGT+TGG 0.523281 8.3:+11331080 MS.gene58033:CDS
TAAGGTCAACAGTGGTTACA+AGG 0.525222 8.3:+11328864 MS.gene58033:CDS
GATTCAGTTAGCACTCCAAT+TGG 0.526089 8.3:+11330793 MS.gene58033:CDS
TGTGAGAGGGAGAATATGTC+TGG 0.529556 8.3:+11328775 None:intergenic
ATTGCATCCATGCTCTCGCT+AGG 0.535134 8.3:+11329429 MS.gene58033:CDS
TGAACTGTGGCTCCATATTG+AGG 0.535591 8.3:-11333622 None:intergenic
ATTTATCAAGCCATTAGTGA+TGG 0.536222 8.3:+11330923 MS.gene58033:CDS
GGTTGCATCATGCCTCCAGC+CGG 0.537046 8.3:-11333436 None:intergenic
TAATCCATGGGAGCAAGCAC+CGG 0.538808 8.3:+11333417 MS.gene58033:CDS
TCATGTTGAACGCCCAGCTA+AGG 0.541327 8.3:+11329020 MS.gene58033:CDS
TTCACAGGTTCAGACGGTGG+AGG 0.541839 8.3:-11331868 None:intergenic
CAATAGGCAACGTCAGCCCT+AGG 0.542438 8.3:-11329410 None:intergenic
CTATTTGGTATTCAGGCTGG+AGG 0.543661 8.3:+11333325 MS.gene58033:intron
GATTTGCAGATTGTTGTTGA+GGG 0.546331 8.3:-11333588 None:intergenic
AACAGGCATACCTGAGCCAT+AGG 0.555181 8.3:-11333647 None:intergenic
TGCAAATGGAACCGCTGGGT+GGG 0.556842 8.3:+11332789 MS.gene58033:CDS
ATGAGTTCTTCATGAAATGT+GGG 0.558036 8.3:-11330050 None:intergenic
CAATAAGGAACCAGAAGTGA+AGG 0.558157 8.3:+11331825 MS.gene58033:CDS
CACTACTGTCTCATTGGCTA+AGG 0.558365 8.3:+11328846 MS.gene58033:CDS
ATTACCAAAAGTTCAGGTGG+TGG 0.561363 8.3:-11331913 None:intergenic
TCCACTTTCACAGGTTCAGA+CGG 0.567213 8.3:-11331874 None:intergenic
ATTGGAAGAGAAGAATGCCT+TGG 0.567227 8.3:+11332087 MS.gene58033:CDS
TGGGAGCAAGCACCGGCTGG+AGG 0.567301 8.3:+11333424 MS.gene58033:CDS
GCATGATTTGAAACAGCAGA+AGG 0.573496 8.3:-11332769 None:intergenic
AACAGTTTGAGAAAAGCACT+TGG 0.582322 8.3:+11328808 MS.gene58033:CDS
CAGAAAATTACCGGGAACGA+TGG 0.585889 8.3:-11332116 None:intergenic
ATAATCGCCTAGCGAGAGCA+TGG 0.590584 8.3:-11329436 None:intergenic
AAGCTCTTGATATATACAGA+AGG 0.592487 8.3:+11331075 MS.gene58033:CDS
TTATTTACAGCTGCTCCTTG+TGG 0.595184 8.3:-11330764 None:intergenic
CCAGGGAGCAATAGTTCGAA+AGG 0.596084 8.3:+11331427 MS.gene58033:CDS
ATCATCGTTTATGCAAGCCA+TGG 0.597268 8.3:+11331382 MS.gene58033:CDS
GGCTTGCATAAACGATGATG+GGG 0.600480 8.3:-11331378 None:intergenic
ACAGGCATACCTGAGCCATA+GGG 0.603728 8.3:-11333646 None:intergenic
GATCCACCTCCCTCAGAGCA+CGG 0.603781 8.3:-11330028 None:intergenic
ATGCAAATGGAACCGCTGGG+TGG 0.604316 8.3:+11332788 MS.gene58033:CDS
ATTTGCAGATTGTTGTTGAG+GGG 0.604944 8.3:-11333587 None:intergenic
TTGTCATTCACCGTGCTCTG+AGG 0.605568 8.3:+11330018 MS.gene58033:CDS
TCAGGTGGTGGTTGTACTGG+TGG 0.607883 8.3:-11331901 None:intergenic
GCTAAGGAGAAACACATTCG+AGG 0.614196 8.3:+11329036 MS.gene58033:CDS
ACTTTCACAGGTTCAGACGG+TGG 0.618055 8.3:-11331871 None:intergenic
GATCTCAGCTACAAGACCTA+GGG 0.619658 8.3:+11329394 MS.gene58033:CDS
TTTCGTATGCTGCAGCCACA+AGG 0.624793 8.3:+11330749 MS.gene58033:intron
AAATGCTAGCTATAATCCAT+GGG 0.626464 8.3:+11333405 MS.gene58033:CDS
CATTCACCGTGCTCTGAGGG+AGG 0.628270 8.3:+11330022 MS.gene58033:CDS
CAGGCATACCTGAGCCATAG+GGG 0.630660 8.3:-11333645 None:intergenic
AGCTCTTGATATATACAGAA+GGG 0.631545 8.3:+11331076 MS.gene58033:CDS
GCTGCCATTTGAACAGAGTG+TGG 0.639866 8.3:-11333502 None:intergenic
TAATCTTGATATTGGACGTG+GGG 0.641124 8.3:+11331232 MS.gene58033:CDS
GGGAACGATGGCTAAAGCCA+AGG 0.647252 8.3:-11332104 None:intergenic
GTAATTACCAAAAGTTCAGG+TGG 0.648044 8.3:-11331916 None:intergenic
GCAGCAACAAATGATGACGA+TGG 0.652978 8.3:+11333564 MS.gene58033:CDS
TAAGGAACCAGAAGTGAAGG+AGG 0.654919 8.3:+11331828 MS.gene58033:CDS
CTTAGCCAATGAGACAGTAG+TGG 0.664093 8.3:-11328845 None:intergenic
TAGAAGTCATATGCTCAACA+TGG 0.670556 8.3:+11330088 MS.gene58033:CDS
GTAATCTTGATATTGGACGT+GGG 0.673634 8.3:+11331231 MS.gene58033:CDS
TATGTCAAAGATGCTCCCCA+GGG 0.677197 8.3:+11331410 MS.gene58033:CDS
ATCATGCAAATGGAACCGCT+GGG 0.691533 8.3:+11332785 MS.gene58033:CDS
TGTGTTGAAGTATGACATTG+AGG 0.694540 8.3:+11330298 MS.gene58033:CDS
ATTATCAAAGACACATAACT+GGG 0.698534 8.3:+11329454 MS.gene58033:CDS
TTTCGAACTATTGCTCCCTG+GGG 0.700129 8.3:-11331425 None:intergenic
GAGAGGGAGAATATGTCTGG+TGG 0.700785 8.3:+11328778 None:intergenic
TCATTGGCTAAGGTCAACAG+TGG 0.721103 8.3:+11328856 MS.gene58033:CDS
GCTTGCATAAACGATGATGG+GGG 0.721996 8.3:-11331377 None:intergenic
TGAGCCATAGGGGTGAACTG+TGG 0.722937 8.3:-11333635 None:intergenic
AAGAGCCAATTCCCACCCAG+CGG 0.743374 8.3:-11332800 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTAACAATAGTAAT+TGG + chr8.3:11332195-11332214 MS.gene58033:intron 10.0%
!! ATAAAATAATTGAAAAGAAT+TGG - chr8.3:11331313-11331332 None:intergenic 10.0%
!!! ATTTTATTTTAATCTAAAAC+AGG + chr8.3:11331753-11331772 MS.gene58033:intron 10.0%
!!! TGTTTTAGATTAAAATAAAA+TGG - chr8.3:11331754-11331773 None:intergenic 10.0%
!! AAACAAACAAAAATTAAGTA+TGG - chr8.3:11330835-11330854 None:intergenic 15.0%
!! TTCATTAAATTCAAAAAAGT+TGG - chr8.3:11330681-11330700 None:intergenic 15.0%
!!! ACTAATACTTTTAATATTAG+AGG + chr8.3:11332571-11332590 MS.gene58033:intron 15.0%
!!! AGTAATAATAAATTTGCTAA+TGG - chr8.3:11332492-11332511 None:intergenic 15.0%
!!! CTTTAAAAATATTTACTAAC+TGG + chr8.3:11331723-11331742 MS.gene58033:intron 15.0%
!!! GTTTTTATTCCATATAAAAA+AGG - chr8.3:11329509-11329528 None:intergenic 15.0%
!! AAAAACACAAATCATAAAAG+AGG - chr8.3:11329076-11329095 None:intergenic 20.0%
!! AAAACACAAATCATAAAAGA+GGG - chr8.3:11329075-11329094 None:intergenic 20.0%
!! AATATAAGGTATATTCAGAA+AGG - chr8.3:11330874-11330893 None:intergenic 20.0%
!! ACATGCATTTATTAATGAAT+AGG + chr8.3:11332442-11332461 MS.gene58033:intron 20.0%
!! ACTTATAAAAAGATACCAAT+GGG - chr8.3:11332895-11332914 None:intergenic 20.0%
!! AGGGATATATTATTTGAAAA+AGG + chr8.3:11333067-11333086 MS.gene58033:intron 20.0%
!! ATATACCTTATATTGCAATT+AGG + chr8.3:11330880-11330899 MS.gene58033:intron 20.0%
!! ATATTAAACAACTGCTAATT+TGG + chr8.3:11332533-11332552 MS.gene58033:intron 20.0%
!! ATATTTATAGATTGTATACG+AGG + chr8.3:11329300-11329319 MS.gene58033:intron 20.0%
!! ATGAAGAACTCATTAATTAT+GGG + chr8.3:11330060-11330079 MS.gene58033:CDS 20.0%
!! ATGATTAATGAGAGAAAAAT+TGG - chr8.3:11332372-11332391 None:intergenic 20.0%
!! ATTTATAACAAGATCAATGA+TGG - chr8.3:11330160-11330179 None:intergenic 20.0%
!! CATGCATTTATTAATGAATA+GGG + chr8.3:11332443-11332462 MS.gene58033:intron 20.0%
!! CATTAAGTTTATAATCTTAC+AGG - chr8.3:11330332-11330351 None:intergenic 20.0%
!! TATTTATAGATTGTATACGA+GGG + chr8.3:11329301-11329320 MS.gene58033:intron 20.0%
!! TGAAATTAAATATCATGTCT+TGG + chr8.3:11332697-11332716 MS.gene58033:intron 20.0%
!! TGAATACATTTATAATCGAA+GGG - chr8.3:11333004-11333023 None:intergenic 20.0%
!! TGATTAATGAGAGAAAAATT+GGG - chr8.3:11332371-11332390 None:intergenic 20.0%
!! TGTATTTGATCTTATCAAAT+TGG + chr8.3:11328950-11328969 MS.gene58033:intron 20.0%
!! TTGAATACATTTATAATCGA+AGG - chr8.3:11333005-11333024 None:intergenic 20.0%
!! TTGAATGATCCTTATAAATA+GGG + chr8.3:11333147-11333166 MS.gene58033:intron 20.0%
!! TTTATAACAAGATCAATGAT+GGG - chr8.3:11330159-11330178 None:intergenic 20.0%
!!! AAATTGGTTTATTGTTTTGT+AGG + chr8.3:11328966-11328985 MS.gene58033:intron 20.0%
!!! AGATCTTATCCTTTTTTATA+TGG + chr8.3:11329497-11329516 MS.gene58033:intron 20.0%
!!! CTTTTATGATTTGTGTTTTT+TGG + chr8.3:11329076-11329095 MS.gene58033:intron 20.0%
!!! TAATTACTGTGTTTTTCTTT+TGG + chr8.3:11331932-11331951 MS.gene58033:intron 20.0%
! AAGAGAACACATAAATACTT+GGG - chr8.3:11329355-11329374 None:intergenic 25.0%
! AAGTCATTTAGTGAATACAT+TGG - chr8.3:11329535-11329554 None:intergenic 25.0%
! AATGTATTCACTAAATGACT+TGG + chr8.3:11329534-11329553 MS.gene58033:intron 25.0%
! ACACGGTAATATTAGTATTT+GGG + chr8.3:11331548-11331567 MS.gene58033:intron 25.0%
! ACCTTAAAGTCAAATAAAAG+TGG + chr8.3:11329689-11329708 MS.gene58033:intron 25.0%
! AGTCAATAAACCAAATAGAA+TGG - chr8.3:11329962-11329981 None:intergenic 25.0%
! ATACAATCTCTTGTAAATGT+TGG + chr8.3:11332729-11332748 MS.gene58033:intron 25.0%
! ATCCTGAAATTTATGTTCTA+AGG + chr8.3:11331156-11331175 MS.gene58033:intron 25.0%
! ATTATCAAAGACACATAACT+GGG + chr8.3:11329454-11329473 MS.gene58033:CDS 25.0%
! ATTGTATTAGAGGCAAAAAA+TGG - chr8.3:11333475-11333494 None:intergenic 25.0%
! CAATAGTCTCATATATACAT+CGG - chr8.3:11331010-11331029 None:intergenic 25.0%
! CATGAAGAACTCATTAATTA+TGG + chr8.3:11330059-11330078 MS.gene58033:CDS 25.0%
! CCTTAAAGTCAAATAAAAGT+GGG + chr8.3:11329690-11329709 MS.gene58033:intron 25.0%
! CTATTTATAAGGATCATTCA+AGG - chr8.3:11333148-11333167 None:intergenic 25.0%
! CTTATAAAAAGATACCAATG+GGG - chr8.3:11332894-11332913 None:intergenic 25.0%
! CTTGAATGATCCTTATAAAT+AGG + chr8.3:11333146-11333165 MS.gene58033:intron 25.0%
! GACTTATAAAAAGATACCAA+TGG - chr8.3:11332896-11332915 None:intergenic 25.0%
! GGAAGAAATTAATGATGTAT+TGG - chr8.3:11332350-11332369 None:intergenic 25.0%
! GGTAATTAATACCAAAAACA+GGG - chr8.3:11331960-11331979 None:intergenic 25.0%
! GTATCTAATAAAACAACTAG+TGG + chr8.3:11331522-11331541 MS.gene58033:intron 25.0%
! GTGAATTTAATAATAGAGAG+AGG - chr8.3:11331134-11331153 None:intergenic 25.0%
! TACACGGTAATATTAGTATT+TGG + chr8.3:11331547-11331566 MS.gene58033:intron 25.0%
! TACTAGTATGATATTACCAT+CGG - chr8.3:11330469-11330488 None:intergenic 25.0%
! TATGTACTGCAATGTTTATA+TGG + chr8.3:11329849-11329868 MS.gene58033:intron 25.0%
! TGACAAAGTAACATTTAGTT+TGG - chr8.3:11332325-11332344 None:intergenic 25.0%
! TGATATACGTATGTGAAAAT+TGG - chr8.3:11332924-11332943 None:intergenic 25.0%
! TGTTTCTTGGTATTTAAACA+AGG - chr8.3:11329829-11329848 None:intergenic 25.0%
! TTATAACAAGATCAATGATG+GGG - chr8.3:11330158-11330177 None:intergenic 25.0%
! TTATTAGCACATATGATTTG+TGG + chr8.3:11333201-11333220 MS.gene58033:intron 25.0%
! TTTGGCTATTGAATACAATA+AGG + chr8.3:11331810-11331829 MS.gene58033:CDS 25.0%
!! AACTGTTAATATGGTTGATA+AGG + chr8.3:11330946-11330965 MS.gene58033:CDS 25.0%
!! TTCTATTTTCTGCATTTTGT+TGG + chr8.3:11332630-11332649 MS.gene58033:intron 25.0%
!! TTTTGAATGTGCAAATTAAC+TGG - chr8.3:11332177-11332196 None:intergenic 25.0%
!!! AATAAATTTGCTAATGGACA+TGG - chr8.3:11332486-11332505 None:intergenic 25.0%
!!! ATTTTTTGCCTCTAATACAA+TGG + chr8.3:11333474-11333493 MS.gene58033:CDS 25.0%
!!! TTCTTTGGAGTTAATCTTAA+CGG + chr8.3:11329123-11329142 MS.gene58033:intron 25.0%
!!! TTTTTGGTATTAATTACCGA+TGG + chr8.3:11331962-11331981 MS.gene58033:intron 25.0%
AAAATGCTAGCTATAATCCA+TGG + chr8.3:11333404-11333423 MS.gene58033:CDS 30.0%
AAACAACTGCTAATTTGGAA+TGG + chr8.3:11332538-11332557 MS.gene58033:intron 30.0%
AAATGCTAGCTATAATCCAT+GGG + chr8.3:11333405-11333424 MS.gene58033:CDS 30.0%
AACAATAGTAATTGGATCGT+TGG + chr8.3:11332203-11332222 MS.gene58033:intron 30.0%
AAGCTCTTGATATATACAGA+AGG + chr8.3:11331075-11331094 MS.gene58033:CDS 30.0%
AATAAGTGAGATGACCTATT+TGG + chr8.3:11333310-11333329 MS.gene58033:intron 30.0%
AATGAGTTCTTCATGAAATG+TGG - chr8.3:11330054-11330073 None:intergenic 30.0%
ACAATAGTAATTGGATCGTT+GGG + chr8.3:11332204-11332223 MS.gene58033:intron 30.0%
ACAGTAATTACCAAAAGTTC+AGG - chr8.3:11331922-11331941 None:intergenic 30.0%
AGCAACCTAATTGCAATATA+AGG - chr8.3:11330888-11330907 None:intergenic 30.0%
AGCTCTTGATATATACAGAA+GGG + chr8.3:11331076-11331095 MS.gene58033:CDS 30.0%
ATATGCCGTAATCTTGATAT+TGG + chr8.3:11331224-11331243 MS.gene58033:CDS 30.0%
ATCAACCAACAAAGTTTATG+TGG - chr8.3:11328906-11328925 None:intergenic 30.0%
ATGAGTTCTTCATGAAATGT+GGG - chr8.3:11330053-11330072 None:intergenic 30.0%
ATGATCCTTATAAATAGGGA+TGG + chr8.3:11333151-11333170 MS.gene58033:intron 30.0%
ATTAACAGTTCCATCACTAA+TGG - chr8.3:11330936-11330955 None:intergenic 30.0%
ATTATGTGAATGTTATCCGA+TGG + chr8.3:11330450-11330469 MS.gene58033:intron 30.0%
ATTGCAGTACATATGTTTCT+TGG - chr8.3:11329842-11329861 None:intergenic 30.0%
ATTTATCAAGCCATTAGTGA+TGG + chr8.3:11330923-11330942 MS.gene58033:CDS 30.0%
CAAAGAAGGAATCAAACATT+TGG - chr8.3:11329110-11329129 None:intergenic 30.0%
CAAATGTTTGATTCCTTCTT+TGG + chr8.3:11329108-11329127 MS.gene58033:intron 30.0%
CACCTTAGAACATAAATTTC+AGG - chr8.3:11331161-11331180 None:intergenic 30.0%
CACGGTAATATTAGTATTTG+GGG + chr8.3:11331549-11331568 MS.gene58033:intron 30.0%
CAGAAAATAGAAAATGATGC+TGG - chr8.3:11332622-11332641 None:intergenic 30.0%
CATTTCCACATAAACTTTGT+TGG + chr8.3:11328898-11328917 MS.gene58033:intron 30.0%
CGCAAAAACGACTATTAATT+TGG - chr8.3:11332289-11332308 None:intergenic 30.0%
CGGTAATTAATACCAAAAAC+AGG - chr8.3:11331961-11331980 None:intergenic 30.0%
GAAGAGAACACATAAATACT+TGG - chr8.3:11329356-11329375 None:intergenic 30.0%
GATGGTAATATCATACTAGT+AGG + chr8.3:11330468-11330487 MS.gene58033:intron 30.0%
GATTATCAAAGACACATAAC+TGG + chr8.3:11329453-11329472 MS.gene58033:CDS 30.0%
GTATATATCAAGAGCTTTCA+AGG - chr8.3:11331072-11331091 None:intergenic 30.0%
GTTAAGATTAACTCCAAAGA+AGG - chr8.3:11329124-11329143 None:intergenic 30.0%
TAAATAAGTGACCTACCAAT+TGG - chr8.3:11330811-11330830 None:intergenic 30.0%
TAGATGCATACACAAATTGA+GGG - chr8.3:11333239-11333258 None:intergenic 30.0%
TAGTACAATATTAATGCTGC+TGG - chr8.3:11330718-11330737 None:intergenic 30.0%
TCATGCATGTTCTTTGAATA+AGG + chr8.3:11330528-11330547 MS.gene58033:intron 30.0%
TTAGATGCATACACAAATTG+AGG - chr8.3:11333240-11333259 None:intergenic 30.0%
TTCTAGTAGGCAAATCAAAA+TGG - chr8.3:11332037-11332056 None:intergenic 30.0%
TTGATATATACAGAAGGGTT+GGG + chr8.3:11331081-11331100 MS.gene58033:CDS 30.0%
TTGCATGTGTGATGAATAAA+CGG - chr8.3:11329789-11329808 None:intergenic 30.0%
! ATATTGCAATTAGGTTGCTT+CGG + chr8.3:11330889-11330908 MS.gene58033:intron 30.0%
! CATAAACTTTGTTGGTTGAT+TGG + chr8.3:11328906-11328925 MS.gene58033:intron 30.0%
! CTATTTGGTTTATTGACTAG+TGG + chr8.3:11329964-11329983 MS.gene58033:intron 30.0%
! TAGTGATGGAACTGTTAATA+TGG + chr8.3:11330937-11330956 MS.gene58033:CDS 30.0%
! TCAATAGCCAAAACTTCTTT+TGG - chr8.3:11331802-11331821 None:intergenic 30.0%
! TCGCAGTTATGCATTATTTT+TGG + chr8.3:11330253-11330272 MS.gene58033:CDS 30.0%
!! AAAACAACTAGTGGATTACA+CGG + chr8.3:11331531-11331550 MS.gene58033:intron 30.0%
!! ACAGTTTAGTAGTGTTGATT+AGG + chr8.3:11333047-11333066 MS.gene58033:intron 30.0%
!! ATGGATTATAGCTAGCATTT+TGG - chr8.3:11333405-11333424 None:intergenic 30.0%
!! ATGTTCTAAGGTGCTTTATT+TGG + chr8.3:11331168-11331187 MS.gene58033:intron 30.0%
!! CAGTTTAGTAGTGTTGATTA+GGG + chr8.3:11333048-11333067 MS.gene58033:intron 30.0%
!! CCCACTTTTATTTGACTTTA+AGG - chr8.3:11329693-11329712 None:intergenic 30.0%
!! GTTTATTGTTTTGTAGGAGT+TGG + chr8.3:11328972-11328991 MS.gene58033:intron 30.0%
!! TCTTTGGAGTTAATCTTAAC+GGG + chr8.3:11329124-11329143 MS.gene58033:intron 30.0%
!! TGTTCTAAGGTGCTTTATTT+GGG + chr8.3:11331169-11331188 MS.gene58033:intron 30.0%
!! TGTTTTTGTGCCATTCTATT+TGG + chr8.3:11329949-11329968 MS.gene58033:intron 30.0%
!! TTGATTTGCCTACTAGAATA+TGG + chr8.3:11332039-11332058 MS.gene58033:intron 30.0%
!!! ATGCATTATTTTTGGAGGAA+AGG + chr8.3:11330261-11330280 MS.gene58033:CDS 30.0%
!!! CAGTTATGCATTATTTTTGG+AGG + chr8.3:11330256-11330275 MS.gene58033:CDS 30.0%
!!! TGACTAGTGGTTTTATCTAT+AGG + chr8.3:11329977-11329996 MS.gene58033:intron 30.0%
AAAAATGGATCGTGCATTGT+CGG - chr8.3:11333460-11333479 None:intergenic 35.0%
AATTGTGAACTTTGTCACAG+AGG + chr8.3:11330561-11330580 MS.gene58033:intron 35.0%
ACAAACAAATCGATGACGTA+GGG - chr8.3:11329166-11329185 None:intergenic 35.0%
ACAAGAGATTGTATGAGTTG+AGG - chr8.3:11332723-11332742 None:intergenic 35.0%
ACCTTGGCAAGAAAGAATAT+AGG - chr8.3:11329597-11329616 None:intergenic 35.0%
ACGTATGTGAAAATTGGCAA+GGG - chr8.3:11332918-11332937 None:intergenic 35.0%
AGATGACCTATTTGGTATTC+AGG + chr8.3:11333318-11333337 MS.gene58033:intron 35.0%
AGGATCATCCATATTCTAGT+AGG - chr8.3:11332050-11332069 None:intergenic 35.0%
ATATCAAGTCCTGAAACAAC+TGG - chr8.3:11331638-11331657 None:intergenic 35.0%
ATCCTTATAAATAGGGATGG+AGG + chr8.3:11333154-11333173 MS.gene58033:intron 35.0%
ATCTTTGACATAGTCTTCCA+TGG - chr8.3:11331402-11331421 None:intergenic 35.0%
ATGAGTTATGCCAATGTTTG+TGG + chr8.3:11329649-11329668 MS.gene58033:intron 35.0%
ATGCAATGTTTCATCAACCT+TGG - chr8.3:11329613-11329632 None:intergenic 35.0%
ATTGTATACGAGGGAATTGT+TGG + chr8.3:11329310-11329329 MS.gene58033:intron 35.0%
CAAAGGTTACAGAACAAAAC+AGG - chr8.3:11331477-11331496 None:intergenic 35.0%
CAATAGTAATTGGATCGTTG+GGG + chr8.3:11332205-11332224 MS.gene58033:intron 35.0%
CACGTCCAATATCAAGATTA+CGG - chr8.3:11331232-11331251 None:intergenic 35.0%
CCATATTGAGGATTTCCAAA+AGG - chr8.3:11333613-11333632 None:intergenic 35.0%
CTTCATACATAAAGCCACAA+AGG - chr8.3:11331494-11331513 None:intergenic 35.0%
CTTGATATATACAGAAGGGT+TGG + chr8.3:11331080-11331099 MS.gene58033:CDS 35.0%
GGTAATATTAGTATTTGGGG+AGG + chr8.3:11331552-11331571 MS.gene58033:intron 35.0%
GGTGAATTACATAATCGCAA+AGG - chr8.3:11329909-11329928 None:intergenic 35.0%
GTAATCTTGATATTGGACGT+GGG + chr8.3:11331231-11331250 MS.gene58033:CDS 35.0%
GTAATTACCAAAAGTTCAGG+TGG - chr8.3:11331919-11331938 None:intergenic 35.0%
GTTATATGCAAAGCAACCAT+CGG - chr8.3:11331981-11332000 None:intergenic 35.0%
TAATCTTGATATTGGACGTG+GGG + chr8.3:11331232-11331251 MS.gene58033:CDS 35.0%
TACGTATGTGAAAATTGGCA+AGG - chr8.3:11332919-11332938 None:intergenic 35.0%
TAGAAGTCATATGCTCAACA+TGG + chr8.3:11330088-11330107 MS.gene58033:CDS 35.0%
TAGTCTCATATATACATCGG+AGG - chr8.3:11331007-11331026 None:intergenic 35.0%
TCAACACTACTAAACTGTCT+TGG - chr8.3:11333045-11333064 None:intergenic 35.0%
TCCTTATAAATAGGGATGGA+GGG + chr8.3:11333155-11333174 MS.gene58033:intron 35.0%
TCTGTGACAAAGTTCACAAT+TGG - chr8.3:11330562-11330581 None:intergenic 35.0%
TGTCTTAACGCAAATGCAAA+AGG - chr8.3:11332143-11332162 None:intergenic 35.0%
TGTGTTGAAGTATGACATTG+AGG + chr8.3:11330298-11330317 MS.gene58033:CDS 35.0%
TTCTCAGTGCATCATCATAT+AGG - chr8.3:11333375-11333394 None:intergenic 35.0%
! ATTTGCAGATTGTTGTTGAG+GGG - chr8.3:11333590-11333609 None:intergenic 35.0%
! CAACAATCTGCAAATCCTTT+TGG + chr8.3:11333595-11333614 MS.gene58033:CDS 35.0%
! CGACTATTAATTTGGAACGA+AGG - chr8.3:11332281-11332300 None:intergenic 35.0%
! CTTTGTTGGTTGATTGGAAT+TGG + chr8.3:11328912-11328931 MS.gene58033:intron 35.0%
! GATTTGCAGATTGTTGTTGA+GGG - chr8.3:11333591-11333610 None:intergenic 35.0%
!! AACAGTTTGAGAAAAGCACT+TGG + chr8.3:11328808-11328827 MS.gene58033:CDS 35.0%
!! AGCAGCAATTTTGTTGTCAA+CGG - chr8.3:11331779-11331798 None:intergenic 35.0%
!! CCTTTTGGAAATCCTCAATA+TGG + chr8.3:11333610-11333629 MS.gene58033:CDS 35.0%
!! GAAAGAGTGCTTATATTCAG+AGG + chr8.3:11333112-11333131 MS.gene58033:intron 35.0%
!! GTTTTGTTCTGTAACCTTTG+TGG + chr8.3:11331477-11331496 MS.gene58033:intron 35.0%
!!! ACAGTTTTTTGAGATGCAAC+GGG + chr8.3:11331040-11331059 MS.gene58033:intron 35.0%
!!! ATTATTTTTGGAGGAAAGGC+TGG + chr8.3:11330265-11330284 MS.gene58033:CDS 35.0%
!!! GACAGTTTTTTGAGATGCAA+CGG + chr8.3:11331039-11331058 MS.gene58033:intron 35.0%
AAAGATGACTCGAGTCCAAA+TGG + chr8.3:11330119-11330138 MS.gene58033:CDS 40.0%
ACATGGACAACAACTATGAG+CGG - chr8.3:11331595-11331614 None:intergenic 40.0%
AGCAATAGTTCGAAAGGATC+AGG + chr8.3:11331433-11331452 MS.gene58033:CDS 40.0%
AGCATGGGATTATTCTGCAT+GGG + chr8.3:11330229-11330248 MS.gene58033:intron 40.0%
AGGGAATTGTTGGATACGTT+AGG + chr8.3:11329320-11329339 MS.gene58033:intron 40.0%
ATCAAGTATACGTGCAAGCA+AGG - chr8.3:11333281-11333300 None:intergenic 40.0%
ATCATCGTTTATGCAAGCCA+TGG + chr8.3:11331382-11331401 MS.gene58033:CDS 40.0%
ATTACCAAAAGTTCAGGTGG+TGG - chr8.3:11331916-11331935 None:intergenic 40.0%
ATTCACAAACACATGCTCAG+TGG - chr8.3:11329930-11329949 None:intergenic 40.0%
ATTGGAAGAGAAGAATGCCT+TGG + chr8.3:11332087-11332106 MS.gene58033:CDS 40.0%
CAAAAGGCCAGAAAATTACC+GGG - chr8.3:11332127-11332146 None:intergenic 40.0%
CAATAAGGAACCAGAAGTGA+AGG + chr8.3:11331825-11331844 MS.gene58033:CDS 40.0%
CAGCTTCTCTATCGAGTTAT+TGG + chr8.3:11330635-11330654 MS.gene58033:CDS 40.0%
CATAATAAACGCGATGTCCT+TGG - chr8.3:11329202-11329221 None:intergenic 40.0%
CGTAATCTTGATATTGGACG+TGG + chr8.3:11331230-11331249 MS.gene58033:CDS 40.0%
GAAGTTCATCAAAGTTGAGC+AGG + chr8.3:11331256-11331275 MS.gene58033:CDS 40.0%
GAATGTGTTTCTCCTTAGCT+GGG - chr8.3:11329035-11329054 None:intergenic 40.0%
GACAAACAAATCGATGACGT+AGG - chr8.3:11329167-11329186 None:intergenic 40.0%
GATACATGAAAGACTGTTGC+TGG - chr8.3:11333537-11333556 None:intergenic 40.0%
GATGATCAAGCCACAAACAT+TGG - chr8.3:11329662-11329681 None:intergenic 40.0%
GATTCAGTTAGCACTCCAAT+TGG + chr8.3:11330793-11330812 MS.gene58033:CDS 40.0%
GCAAAAGGCCAGAAAATTAC+CGG - chr8.3:11332128-11332147 None:intergenic 40.0%
GCCTATATTCTTTCTTGCCA+AGG + chr8.3:11329593-11329612 MS.gene58033:intron 40.0%
GGATTAAGACAAGCACCATT+TGG - chr8.3:11330137-11330156 None:intergenic 40.0%
GGGAATTGTTGGATACGTTA+GGG + chr8.3:11329321-11329340 MS.gene58033:intron 40.0%
GGTGAAAGTGAAACAGTACA+TGG - chr8.3:11331612-11331631 None:intergenic 40.0%
TAAGGTCAACAGTGGTTACA+AGG + chr8.3:11328864-11328883 MS.gene58033:CDS 40.0%
TAGAGAAGCTGTTGTAAAGC+TGG - chr8.3:11330626-11330645 None:intergenic 40.0%
TCAAGTATACGTGCAAGCAA+GGG - chr8.3:11333280-11333299 None:intergenic 40.0%
TCCCTCCATCCCTATTTATA+AGG - chr8.3:11333159-11333178 None:intergenic 40.0%
TTATTTACAGCTGCTCCTTG+TGG - chr8.3:11330767-11330786 None:intergenic 40.0%
TTCATCAAAGTTGAGCAGGT+TGG + chr8.3:11331260-11331279 MS.gene58033:intron 40.0%
TTCGGCAGTATCCAAATCTT+TGG - chr8.3:11330588-11330607 None:intergenic 40.0%
TTTCTTCTTCAATGCCCCAT+TGG + chr8.3:11332877-11332896 MS.gene58033:intron 40.0%
! ATGGCTTGCATAAACGATGA+TGG - chr8.3:11331383-11331402 None:intergenic 40.0%
! GGATTTGCAGATTGTTGTTG+AGG - chr8.3:11333592-11333611 None:intergenic 40.0%
! TAATTTGGAATGGAGCGAGT+AGG + chr8.3:11332548-11332567 MS.gene58033:intron 40.0%
! TCGTGTTTTGTGTTCAGCAT+GGG + chr8.3:11330214-11330233 MS.gene58033:intron 40.0%
! TGCTGCTCCAAAAGAAGTTT+TGG + chr8.3:11331792-11331811 MS.gene58033:CDS 40.0%
! TGGCTTGCATAAACGATGAT+GGG - chr8.3:11331382-11331401 None:intergenic 40.0%
! TTCGTGTTTTGTGTTCAGCA+TGG + chr8.3:11330213-11330232 MS.gene58033:intron 40.0%
! TTGTCACATGTTCTGAACCA+AGG + chr8.3:11329182-11329201 MS.gene58033:intron 40.0%
!! AAAAGCACTTGGAGCTCTTA+AGG + chr8.3:11328819-11328838 MS.gene58033:CDS 40.0%
!!! TTCTTTTGGTGCCCTGTTTT+TGG + chr8.3:11331946-11331965 MS.gene58033:intron 40.0%
AAGTCCTGAAACAACTGGAG+AGG - chr8.3:11331633-11331652 None:intergenic 45.0%
AGTTGGATCAAAAGCTCACC+TGG - chr8.3:11330664-11330683 None:intergenic 45.0%
CAGAAAATTACCGGGAACGA+TGG - chr8.3:11332119-11332138 None:intergenic 45.0%
CAGCAGCTAGCAAATTGGTA+TGG + chr8.3:11332854-11332873 MS.gene58033:intron 45.0%
CAGCATGGGATTATTCTGCA+TGG + chr8.3:11330228-11330247 MS.gene58033:intron 45.0%
CAGTTAGCACTCCAATTGGT+AGG + chr8.3:11330797-11330816 MS.gene58033:intron 45.0%
CGAATGTGTTTCTCCTTAGC+TGG - chr8.3:11329036-11329055 None:intergenic 45.0%
CTATTTGGTATTCAGGCTGG+AGG + chr8.3:11333325-11333344 MS.gene58033:intron 45.0%
CTCCAGCCTGAATACCAAAT+AGG - chr8.3:11333327-11333346 None:intergenic 45.0%
CTTAGCCAATGAGACAGTAG+TGG - chr8.3:11328848-11328867 None:intergenic 45.0%
CTTTCGAACTATTGCTCCCT+GGG - chr8.3:11331429-11331448 None:intergenic 45.0%
GACCTATTTGGTATTCAGGC+TGG + chr8.3:11333322-11333341 MS.gene58033:intron 45.0%
GATCTCAGCTACAAGACCTA+GGG + chr8.3:11329394-11329413 MS.gene58033:CDS 45.0%
GCAAGCAAGGGTAATGATTG+TGG - chr8.3:11333268-11333287 None:intergenic 45.0%
GCAGCACTTTCATTTGAGCT+AGG - chr8.3:11332835-11332854 None:intergenic 45.0%
GCTAAGGAGAAACACATTCG+AGG + chr8.3:11329036-11329055 MS.gene58033:CDS 45.0%
GGCTTGCATAAACGATGATG+GGG - chr8.3:11331381-11331400 None:intergenic 45.0%
GTCACAGAGGACCAAAGATT+TGG + chr8.3:11330574-11330593 MS.gene58033:intron 45.0%
TAAGGAACCAGAAGTGAAGG+AGG + chr8.3:11331828-11331847 MS.gene58033:CDS 45.0%
TATGTCAAAGATGCTCCCCA+GGG + chr8.3:11331410-11331429 MS.gene58033:CDS 45.0%
TCCACTTTCACAGGTTCAGA+CGG - chr8.3:11331877-11331896 None:intergenic 45.0%
TGAACTGTGGCTCCATATTG+AGG - chr8.3:11333625-11333644 None:intergenic 45.0%
TGCTCCACACTCTGTTCAAA+TGG + chr8.3:11333498-11333517 MS.gene58033:CDS 45.0%
TGGAGCAGCCATTGTATTAG+AGG - chr8.3:11333485-11333504 None:intergenic 45.0%
TGGCAACTGCTCTAGCAATT+CGG - chr8.3:11330606-11330625 None:intergenic 45.0%
TTTCGAACTATTGCTCCCTG+GGG - chr8.3:11331428-11331447 None:intergenic 45.0%
! ACAACCACCACCTGAACTTT+TGG + chr8.3:11331909-11331928 MS.gene58033:CDS 45.0%
! CACTACTGTCTCATTGGCTA+AGG + chr8.3:11328846-11328865 MS.gene58033:CDS 45.0%
! CATCGTTCCCGGTAATTTTC+TGG + chr8.3:11332117-11332136 MS.gene58033:intron 45.0%
! CTATCGAGTTATTGGTTGCC+AGG + chr8.3:11330643-11330662 MS.gene58033:CDS 45.0%
! GCAGCAACAAATGATGACGA+TGG + chr8.3:11333564-11333583 MS.gene58033:CDS 45.0%
! GCTTGCATAAACGATGATGG+GGG - chr8.3:11331380-11331399 None:intergenic 45.0%
! TCATTGGCTAAGGTCAACAG+TGG + chr8.3:11328856-11328875 MS.gene58033:CDS 45.0%
! TTCACCTCTCCAGTTGTTTC+AGG + chr8.3:11331626-11331645 MS.gene58033:intron 45.0%
!! AAGGTGCTTTATTTGGGTCC+AGG + chr8.3:11331175-11331194 MS.gene58033:intron 45.0%
AATTCTGCAGCAGCTGGAAC+AGG - chr8.3:11332070-11332089 None:intergenic 50.0%
ACCGTCTGAACCTGTGAAAG+TGG + chr8.3:11331873-11331892 MS.gene58033:CDS 50.0%
ACTTTCACAGGTTCAGACGG+TGG - chr8.3:11331874-11331893 None:intergenic 50.0%
ATAATCGCCTAGCGAGAGCA+TGG - chr8.3:11329439-11329458 None:intergenic 50.0%
ATTGCATCCATGCTCTCGCT+AGG + chr8.3:11329429-11329448 MS.gene58033:CDS 50.0%
CCAGGGAGCAATAGTTCGAA+AGG + chr8.3:11331427-11331446 MS.gene58033:CDS 50.0%
CCTTTCGAACTATTGCTCCC+TGG - chr8.3:11331430-11331449 None:intergenic 50.0%
CGATCTCAGCTACAAGACCT+AGG + chr8.3:11329393-11329412 MS.gene58033:CDS 50.0%
CTATGTCAAAGATGCTCCCC+AGG + chr8.3:11331409-11331428 MS.gene58033:CDS 50.0%
GGACACCACTACTGTCTCAT+TGG + chr8.3:11328840-11328859 MS.gene58033:CDS 50.0%
GGTGGTGTTTCCACTTTCAC+AGG - chr8.3:11331886-11331905 None:intergenic 50.0%
TAATCCATGGGAGCAAGCAC+CGG + chr8.3:11333417-11333436 MS.gene58033:CDS 50.0%
TCATGTTGAACGCCCAGCTA+AGG + chr8.3:11329020-11329039 MS.gene58033:CDS 50.0%
TCTTCCAATTCTGCAGCAGC+TGG - chr8.3:11332076-11332095 None:intergenic 50.0%
TGCATGTTTGACGATGTCGC+TGG - chr8.3:11332429-11332448 None:intergenic 50.0%
TGCTGCAGCAGCTAGCAAAT+TGG + chr8.3:11332849-11332868 MS.gene58033:CDS 50.0%
TGGTATTCAGGCTGGAGGTT+TGG + chr8.3:11333330-11333349 MS.gene58033:intron 50.0%
TGTCATTCACCGTGCTCTGA+GGG + chr8.3:11330019-11330038 MS.gene58033:CDS 50.0%
TGTTCCAGCTGCTGCAGAAT+TGG + chr8.3:11332069-11332088 MS.gene58033:CDS 50.0%
TTGTCATTCACCGTGCTCTG+AGG + chr8.3:11330018-11330037 MS.gene58033:CDS 50.0%
TTTCGTATGCTGCAGCCACA+AGG + chr8.3:11330749-11330768 MS.gene58033:intron 50.0%
! AGCGAGAGCATGGATGCAAT+AGG - chr8.3:11329429-11329448 None:intergenic 50.0%
! AGTTCAGGTGGTGGTTGTAC+TGG - chr8.3:11331907-11331926 None:intergenic 50.0%
! GCTGCCATTTGAACAGAGTG+TGG - chr8.3:11333505-11333524 None:intergenic 50.0%
!! TTGGCTTTAGCCATCGTTCC+CGG + chr8.3:11332106-11332125 MS.gene58033:CDS 50.0%
AAGAGCCAATTCCCACCCAG+CGG - chr8.3:11332803-11332822 None:intergenic 55.0%
ACAGTTCACCCCTATGGCTC+AGG + chr8.3:11333637-11333656 MS.gene58033:CDS 55.0%
ACTCTGACAGTCTCTCAGCC+TGG - chr8.3:11331196-11331215 None:intergenic 55.0%
ATACAGAAGGGTTGGGCTGC+AGG + chr8.3:11331088-11331107 MS.gene58033:CDS 55.0%
CAATAGGCAACGTCAGCCCT+AGG - chr8.3:11329413-11329432 None:intergenic 55.0%
GCACGTTCCTCCTTCACTTC+TGG - chr8.3:11331838-11331857 None:intergenic 55.0%
GGGAACGATGGCTAAAGCCA+AGG - chr8.3:11332107-11332126 None:intergenic 55.0%
TCACAGGTTCAGACGGTGGA+GGG - chr8.3:11331870-11331889 None:intergenic 55.0%
TGAGCCATAGGGGTGAACTG+TGG - chr8.3:11333638-11333657 None:intergenic 55.0%
TTCACAGGTTCAGACGGTGG+AGG - chr8.3:11331871-11331890 None:intergenic 55.0%
! TCAGGTGGTGGTTGTACTGG+TGG - chr8.3:11331904-11331923 None:intergenic 55.0%
ACAGGTTCAGACGGTGGAGG+GGG - chr8.3:11331868-11331887 None:intergenic 60.0%
CACAGGTTCAGACGGTGGAG+GGG - chr8.3:11331869-11331888 None:intergenic 60.0%
GATCCACCTCCCTCAGAGCA+CGG - chr8.3:11330031-11330050 None:intergenic 60.0%
GGAGCCACAGTTCACCCCTA+TGG + chr8.3:11333631-11333650 MS.gene58033:CDS 60.0%
GGTTGCATCATGCCTCCAGC+CGG - chr8.3:11333439-11333458 None:intergenic 60.0%
TGGAACCGCTGGGTGGGAAT+TGG + chr8.3:11332795-11332814 MS.gene58033:CDS 60.0%
!! CATTCACCGTGCTCTGAGGG+AGG + chr8.3:11330022-11330041 MS.gene58033:CDS 60.0%
!! TCACCGTGCTCTGAGGGAGG+TGG + chr8.3:11330025-11330044 MS.gene58033:CDS 65.0%
CCAGCCGGTGCTTGCTCCCA+TGG - chr8.3:11333424-11333443 None:intergenic 70.0%
TCAGACGGTGGAGGGGGCGA+GGG - chr8.3:11331862-11331881 None:intergenic 70.0%
TTCAGACGGTGGAGGGGGCG+AGG - chr8.3:11331863-11331882 None:intergenic 70.0%
!! CCATGGGAGCAAGCACCGGC+TGG + chr8.3:11333421-11333440 MS.gene58033:CDS 70.0%
!! TGGGAGCAAGCACCGGCTGG+AGG + chr8.3:11333424-11333443 MS.gene58033:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 11328790 11333658 11328790 ID=MS.gene58033
chr8.3 mRNA 11328790 11333658 11328790 ID=MS.gene58033.t1;Parent=MS.gene58033
chr8.3 exon 11328790 11328885 11328790 ID=MS.gene58033.t1.exon1;Parent=MS.gene58033.t1
chr8.3 CDS 11328790 11328885 11328790 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11328988 11329057 11328988 ID=MS.gene58033.t1.exon2;Parent=MS.gene58033.t1
chr8.3 CDS 11328988 11329057 11328988 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11329381 11329478 11329381 ID=MS.gene58033.t1.exon3;Parent=MS.gene58033.t1
chr8.3 CDS 11329381 11329478 11329381 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11329999 11330140 11329999 ID=MS.gene58033.t1.exon4;Parent=MS.gene58033.t1
chr8.3 CDS 11329999 11330140 11329999 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11330231 11330331 11330231 ID=MS.gene58033.t1.exon5;Parent=MS.gene58033.t1
chr8.3 CDS 11330231 11330331 11330231 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11330581 11330664 11330581 ID=MS.gene58033.t1.exon6;Parent=MS.gene58033.t1
chr8.3 CDS 11330581 11330664 11330581 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11330764 11330814 11330764 ID=MS.gene58033.t1.exon7;Parent=MS.gene58033.t1
chr8.3 CDS 11330764 11330814 11330764 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11330902 11330967 11330902 ID=MS.gene58033.t1.exon8;Parent=MS.gene58033.t1
chr8.3 CDS 11330902 11330967 11330902 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11331044 11331109 11331044 ID=MS.gene58033.t1.exon9;Parent=MS.gene58033.t1
chr8.3 CDS 11331044 11331109 11331044 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11331197 11331277 11331197 ID=MS.gene58033.t1.exon10;Parent=MS.gene58033.t1
chr8.3 CDS 11331197 11331277 11331197 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11331377 11331454 11331377 ID=MS.gene58033.t1.exon11;Parent=MS.gene58033.t1
chr8.3 CDS 11331377 11331454 11331377 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11331775 11331930 11331775 ID=MS.gene58033.t1.exon12;Parent=MS.gene58033.t1
chr8.3 CDS 11331775 11331930 11331775 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11332055 11332127 11332055 ID=MS.gene58033.t1.exon13;Parent=MS.gene58033.t1
chr8.3 CDS 11332055 11332127 11332055 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11332758 11332870 11332758 ID=MS.gene58033.t1.exon14;Parent=MS.gene58033.t1
chr8.3 CDS 11332758 11332870 11332758 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
chr8.3 exon 11333340 11333658 11333340 ID=MS.gene58033.t1.exon15;Parent=MS.gene58033.t1
chr8.3 CDS 11333340 11333658 11333340 ID=cds.MS.gene58033.t1;Parent=MS.gene58033.t1
Gene Sequence

>MS.gene58033

ATGTCTGGTGGAACGCAGAACAGTTTGAGAAAAGCACTTGGAGCTCTTAAGGACACCACTACTGTCTCATTGGCTAAGGTCAACAGTGGTTACAAGGTACAATTCAATCATTTCCACATAAACTTTGTTGGTTGATTGGAATTGGATCATGTATTTTTTTTGTATTTGATCTTATCAAATTGGTTTATTGTTTTGTAGGAGTTGGACATTGCTATCGTTCGAGCAACGAATCATGTTGAACGCCCAGCTAAGGAGAAACACATTCGAGGTTTGTGTTATTTTCCCTCTTTTATGATTTGTGTTTTTTGGATGAATATCCAAATGTTTGATTCCTTCTTTGGAGTTAATCTTAACGGGTATGTGCTGATTTGCGCCCTACGTCATCGATTTGTTTGTCACATGTTCTGAACCAAGGACATCGCGTTTATTATGATTGTTTGTACATGAAGTAATCGTTGTGATCTGTATACTATTTAATTTAATTTAATTTACGTTTATACTATTTGTTGCATATTTATAGATTGTATACGAGGGAATTGTTGGATACGTTAGGGTTTTAACTCCCAAGTATTTATGTGTTCTCTTCTGCAGCTATATTTTCAGCGATCTCAGCTACAAGACCTAGGGCTGACGTTGCCTATTGCATCCATGCTCTCGCTAGGCGATTATCAAAGACACATAACTGGGCTGTACGTGCACTGCGACTTAGATCTTATCCTTTTTTATATGGAATAAAAACTGTCCAATGTATTCACTAAATGACTTGGAATGTGTGATAAAGTTTTTATCAAGTATTTATGTTTGCCTATATTCTTTCTTGCCAAGGTTGATGAAACATTGCATTTTTTATGTCATAATCATGAGTTATGCCAATGTTTGTGGCTTGATCATCACGTGTTACCTTAAAGTCAAATAAAAGTGGGTCATAAATGAAATATCTAGATAACATTTTAAACAGAAATCTACTGATACATGTTTTACATGACTCTCTTTTATCCGTTTATTCATCACACATGCAATTGTTTTGCATGTTTAACCTTGTTTAAATACCAAGAAACATATGTACTGCAATGTTTATATGGCAACTTCTGCTGTTATCTTCTAATTTTTCAGTTACCTTTGCGATTATGTAATTCACCACTGAGCATGTGTTTGTGAATGTTTTTGTGCCATTCTATTTGGTTTATTGACTAGTGGTTTTATCTATAGGTTGCTTTGAAAACTTTAATTGTCATTCACCGTGCTCTGAGGGAGGTGGATCCCACATTTCATGAAGAACTCATTAATTATGGGAGAAGTAGAAGTCATATGCTCAACATGGCTCATTTTAAAGATGACTCGAGTCCAAATGGTGCTTGTCTTAATCCCCATCATTGATCTTGTTATAAATTTAATCATCATCTGTATTGACGTTGTATTTTCATTCGTGTTTTGTGTTCAGCATGGGATTATTCTGCATGGGTTCGCAGTTATGCATTATTTTTGGAGGAAAGGCTGGAATGTTTTCGTGTGTTGAAGTATGACATTGAGGCTGATCGTCCTGTAAGATTATAAACTTAATGTTTCAGAATTTAAATTTTTTCAGAAGCAGTTGAATTATGTGAATGTTATCTGATAGTAATATCATGTTTCAGAATTTAAATTTTTCACAAGCAGTTGAATTATGTGAATGTTATCCGATGGTAATATCATACTAGTAGGTCTTAATAGTGATTTTTATCTCGTCACATCACATACGTCATGCATGTTCTTTGAATAAGGAAAGTTTACCAATTGTGAACTTTGTCACAGAGGACCAAAGATTTGGATACTGCCGAATTGCTAGAGCAGTTGCCAGCTTTACAACAGCTTCTCTATCGAGTTATTGGTTGCCAGGTGAGCTTTTGATCCAACTTTTTTGAATTTAATGAACAAAATTTATGATGCCAGCAGCATTAATATTGTACTAATTGTTTTAAATTTCGTATGCTGCAGCCACAAGGAGCAGCTGTAAATAATTTTGTGATTCAGTTAGCACTCCAATTGGTAGGTCACTTATTTAACCATACTTAATTTTTGTTTGTTTGTTTTTGCTTTCATCACCTTTCTGAATATACCTTATATTGCAATTAGGTTGCTTCGGAAAGCATTAAAATTTATCAAGCCATTAGTGATGGAACTGTTAATATGGTTGATAAGGTATGTTATCTTCATGAATTTGAAGCTTTAATGTAACCTCCGATGTATATATGAGACTATTGTGTATTTGTGACAGTTTTTTGAGATGCAACGGGAAGATGCCTTGAAAGCTCTTGATATATACAGAAGGGTTGGGCTGCAGGTATGTCTTATGACAAAATTTCCTCTCTCTATTATTAAATTCACGTATCCTGAAATTTATGTTCTAAGGTGCTTTATTTGGGTCCAGGCTGAGAGACTGTCAGAGTTTTATGAAATATGCCGTAATCTTGATATTGGACGTGGGGAGAAGTTCATCAAAGTTGAGCAGGTTGGTTAGATCTTATATCATGCTTACTTTTGCCAATTCTTTTCAATTATTTTATGAAATATAATACAATACTAAATGAACTGATTTATGATATTGAAGCCCCCATCATCGTTTATGCAAGCCATGGAAGACTATGTCAAAGATGCTCCCCAGGGAGCAATAGTTCGAAAGGATCAGGTATGTACGAACATCAATACCTGTTTTGTTCTGTAACCTTTGTGGCTTTATGTATGAAGTACAAGTTGTATCTAATAAAACAACTAGTGGATTACACGGTAATATTAGTATTTGGGGAGGCAATATTAATATTTTAGCCGCTCATAGTTGTTGTCCATGTACTGTTTCACTTTCACCTCTCCAGTTGTTTCAGGACTTGATATGTTATTGCAATCATATAACTTCAAAATATTTCTTCTATATCTTGATGAAGTCACTATTTAATATGCTTTAAAAATATTTACTAACTGGCGCTTCCATTTTATTTTAATCTAAAACAGGCCGTTGACAACAAAATTGCTGCTCCAAAAGAAGTTTTGGCTATTGAATACAATAAGGAACCAGAAGTGAAGGAGGAACGTGCACCCTCGCCCCCTCCACCGTCTGAACCTGTGAAAGTGGAAACACCACCAGTACAACCACCACCTGAACTTTTGGTAATTACTGTGTTTTTCTTTTGGTGCCCTGTTTTTGGTATTAATTACCGATGGTTGCTTTGCATATAACTTAGTTGCTTTGCTTGCACTAAAAAATTTCTCTCCATTTTGATTTGCCTACTAGAATATGGATGATCCTGTTCCAGCTGCTGCAGAATTGGAAGAGAAGAATGCCTTGGCTTTAGCCATCGTTCCCGGTAATTTTCTGGCCTTTTGCATTTGCGTTAAGACATTGAATAAAAGCCAGTTAATTTGCACATTCAAAAATAATTAACAATAGTAATTGGATCGTTGGGGTAACTGAATTTATTTTCTTTTCAACAAGAGTGATGTTTCACATTGTTACTCCTTCGTTCCAAATTAATAGTCGTTTTTGCGAATGTAAAAAATTCCAAACTAAATGTTACTTTGTCATTCCAATACATCATTAATTTCTTCCCAATTTTTCTCTCATTAATCATGAGACATGTAGCTATTATTACAACTTTTCATGAACCAGCGACATCGTCAAACATGCATTTATTAATGAATAGGGTTAATTTAGTAAAACTACCATGTCCATTAGCAAATTTATTATTACTTTTCTTAATATTTGCGTAGCAATATTAAACAACTGCTAATTTGGAATGGAGCGAGTAGGACTAATACTTTTAATATTAGAGGATAATCATATAAAATAAACTATATTCCAGCATCATTTTCTATTTTCTGCATTTTGTTGGTAGTACGAACTTAAGAGTTAAGATTAGAATGCTCAGTTTGATATTGAAATTAAATATCATGTCTTGGCCTCAACTCATACAATCTCTTGTAAATGTTGGTTTCAGCTGATCAACAACCTTCTGCTGTTTCAAATCATGCAAATGGAACCGCTGGGTGGGAATTGGCTCTTGTTACAGCTCCTAGCTCAAATGAAAGTGCTGCAGCAGCTAGCAAATTGGTATGGTTTCTTCTTCAATGCCCCATTGGTATCTTTTTATAAGTCCCTTGCCAATTTTCACATACGTATATCAAGAAAAATTGCTAGTGTATTTAATGTGTATATTTTGTGTATAACTATTAATAAATTGCCCTTCGATTATAAATGTATTCAATATTGATTTTTCATCTTCCAAGACAGTTTAGTAGTGTTGATTAGGGATATATTATTTGAAAAAGGTAATAAATGCATCTAGTAATCTGAAAGAGTGCTTATATTCAGAGGCACGTTTTTTCCTTGAATGATCCTTATAAATAGGGATGGAGGGAGTAGTAAACTACATTTAATGTTTTATTAGCACATATGATTTGTGGATGTAAATTTTTCCCTCAATTTGTGTATGCATCTAAATGAACCACAATCATTACCCTTGCTTGCACGTATACTTGATGTTTCTGTTAATAAGTGAGATGACCTATTTGGTATTCAGGCTGGAGGTTTGGACATGCTTACATTAGACAGCCTATATGATGATGCACTGAGAAGAAACAACCAAAATGCTAGCTATAATCCATGGGAGCAAGCACCGGCTGGAGGCATGATGCAACCGACAATGCACGATCCATTTTTTGCCTCTAATACAATGGCTGCTCCACACTCTGTTCAAATGGCAGCTATGTCAAACCAGCAACAGTCTTTCATGTATCAGCAGCAGCAGCAACAAATGATGACGATGGCCCCTCAACAACAATCTGCAAATCCTTTTGGAAATCCTCAATATGGAGCCACAGTTCACCCCTATGGCTCAG

Protein sequence

>MS.gene58033.t1

MSGGTQNSLRKALGALKDTTTVSLAKVNSGYKELDIAIVRATNHVERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRSYALFLEERLECFRVLKYDIEADRPRTKDLDTAELLEQLPALQQLLYRVIGCQPQGAAVNNFVIQLALQLVASESIKIYQAISDGTVNMVDKFFEMQREDALKALDIYRRVGLQAERLSEFYEICRNLDIGRGEKFIKVEQPPSSFMQAMEDYVKDAPQGAIVRKDQAVDNKIAAPKEVLAIEYNKEPEVKEERAPSPPPPSEPVKVETPPVQPPPELLNMDDPVPAAAELEEKNALALAIVPADQQPSAVSNHANGTAGWELALVTAPSSNESAAAASKLAGGLDMLTLDSLYDDALRRNNQNASYNPWEQAPAGGMMQPTMHDPFFASNTMAAPHSVQMAAMSNQQQSFMYQQQQQQMMTMAPQQQSANPFGNPQYGATVHPYGS