Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59588.t1 | XP_013444681.1 | 96.4 | 969 | 25 | 3 | 1 | 964 | 1 | 964 | 0.00E+00 | 1873.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59588.t1 | Q9SYX2 | 49.0 | 878 | 384 | 16 | 107 | 964 | 196 | 1029 | 1.7e-211 | 737.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59588.t1 | A0A072TNB4 | 96.4 | 969 | 25 | 3 | 1 | 964 | 1 | 964 | 0.0e+00 | 1873.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049257 | MS.gene59588 | 0.841038 | 6.05E-58 | -1.69E-46 |
| MS.gene05081 | MS.gene59588 | 0.824255 | 8.91E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene59588 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene051552 | MS.gene59588 | -0.846816 | 1.71E-59 | -1.69E-46 |
| MS.gene052469 | MS.gene59588 | 0.825025 | 5.87E-54 | -1.69E-46 |
| MS.gene053330 | MS.gene59588 | 0.827367 | 1.63E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene59588 | 0.846286 | 2.39E-59 | -1.69E-46 |
| MS.gene054344 | MS.gene59588 | 0.823846 | 1.11E-53 | -1.69E-46 |
| MS.gene054884 | MS.gene59588 | -0.815949 | 7.11E-52 | -1.69E-46 |
| MS.gene055370 | MS.gene59588 | 0.802062 | 6.70E-49 | -1.69E-46 |
| MS.gene05556 | MS.gene59588 | 0.814913 | 1.21E-51 | -1.69E-46 |
| MS.gene056633 | MS.gene59588 | 0.854827 | 9.50E-62 | -1.69E-46 |
| MS.gene056877 | MS.gene59588 | 0.809656 | 1.70E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene59588 | 0.814592 | 1.42E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene59588 | 0.828652 | 7.98E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene59588 | 0.8112 | 7.88E-51 | -1.69E-46 |
| MS.gene058418 | MS.gene59588 | -0.848965 | 4.38E-60 | -1.69E-46 |
| MS.gene058746 | MS.gene59588 | 0.815861 | 7.44E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene59588 | 0.814378 | 1.59E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene59588 | 0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene59588 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene059512 | MS.gene59588 | 0.852882 | 3.45E-61 | -1.69E-46 |
| MS.gene061231 | MS.gene59588 | 0.841584 | 4.35E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59588.t1 | MTR_8g027985 | 96.388 | 969 | 25 | 3 | 1 | 964 | 1 | 964 | 0.0 | 1932 |
| MS.gene59588.t1 | MTR_5g009530 | 50.239 | 838 | 321 | 18 | 168 | 964 | 252 | 1034 | 0.0 | 744 |
| MS.gene59588.t1 | MTR_5g009530 | 48.969 | 776 | 301 | 17 | 168 | 902 | 252 | 973 | 0.0 | 660 |
| MS.gene59588.t1 | MTR_2g085210 | 40.072 | 831 | 404 | 16 | 196 | 964 | 77 | 875 | 1.99e-177 | 538 |
| MS.gene59588.t1 | MTR_5g009530 | 42.429 | 601 | 251 | 17 | 168 | 727 | 252 | 798 | 4.50e-126 | 402 |
| MS.gene59588.t1 | MTR_5g085250 | 44.602 | 352 | 182 | 3 | 613 | 963 | 199 | 538 | 4.97e-103 | 332 |
| MS.gene59588.t1 | MTR_5g085250 | 44.602 | 352 | 182 | 3 | 613 | 963 | 232 | 571 | 3.38e-102 | 331 |
| MS.gene59588.t1 | MTR_5g085250 | 44.602 | 352 | 182 | 3 | 613 | 963 | 336 | 675 | 5.58e-101 | 331 |
| MS.gene59588.t1 | MTR_2g085210 | 34.477 | 641 | 330 | 14 | 196 | 774 | 77 | 689 | 7.68e-95 | 315 |
| MS.gene59588.t1 | MTR_2g085210 | 34.477 | 641 | 330 | 14 | 196 | 774 | 77 | 689 | 1.66e-94 | 315 |
| MS.gene59588.t1 | MTR_2g016160 | 25.000 | 268 | 173 | 10 | 649 | 905 | 60 | 310 | 2.72e-15 | 78.6 |
| MS.gene59588.t1 | MTR_7g086360 | 23.485 | 264 | 184 | 8 | 646 | 904 | 51 | 301 | 1.61e-13 | 73.6 |
| MS.gene59588.t1 | MTR_4g071130 | 24.609 | 256 | 150 | 11 | 720 | 951 | 29 | 265 | 7.07e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59588.t1 | AT2G46340 | 51.202 | 832 | 348 | 14 | 153 | 964 | 236 | 1029 | 0.0 | 763 |
| MS.gene59588.t1 | AT2G46340 | 51.202 | 832 | 348 | 14 | 153 | 964 | 236 | 1029 | 0.0 | 763 |
| MS.gene59588.t1 | AT4G11110 | 47.876 | 777 | 366 | 12 | 191 | 964 | 296 | 1036 | 0.0 | 686 |
| MS.gene59588.t1 | AT3G15354 | 38.780 | 820 | 400 | 15 | 196 | 964 | 76 | 844 | 0.0 | 561 |
| MS.gene59588.t1 | AT3G15354 | 38.171 | 820 | 397 | 16 | 196 | 964 | 76 | 836 | 2.07e-179 | 542 |
| MS.gene59588.t1 | AT1G53090 | 42.145 | 662 | 333 | 11 | 338 | 964 | 148 | 794 | 4.65e-169 | 514 |
| MS.gene59588.t1 | AT1G53090 | 37.634 | 93 | 54 | 2 | 166 | 258 | 38 | 126 | 2.12e-11 | 68.6 |
| MS.gene59588.t1 | AT1G53090 | 42.145 | 662 | 333 | 11 | 338 | 964 | 148 | 794 | 4.65e-169 | 514 |
| MS.gene59588.t1 | AT1G53090 | 37.634 | 93 | 54 | 2 | 166 | 258 | 38 | 126 | 2.12e-11 | 68.6 |
| MS.gene59588.t1 | AT1G53090 | 42.145 | 662 | 333 | 11 | 338 | 964 | 148 | 794 | 4.65e-169 | 514 |
| MS.gene59588.t1 | AT1G53090 | 37.634 | 93 | 54 | 2 | 166 | 258 | 38 | 126 | 2.12e-11 | 68.6 |
| MS.gene59588.t1 | AT3G15354 | 43.261 | 601 | 287 | 10 | 411 | 964 | 1 | 594 | 1.69e-160 | 484 |
| MS.gene59588.t1 | AT3G15354 | 43.261 | 601 | 287 | 10 | 411 | 964 | 1 | 594 | 1.69e-160 | 484 |
| MS.gene59588.t1 | AT1G53090 | 43.367 | 588 | 284 | 10 | 411 | 964 | 1 | 573 | 5.35e-157 | 474 |
| MS.gene59588.t1 | AT3G15354 | 33.175 | 630 | 323 | 13 | 196 | 774 | 76 | 658 | 6.97e-106 | 344 |
| MS.gene59588.t1 | AT2G32950 | 40.230 | 435 | 228 | 5 | 532 | 963 | 155 | 560 | 2.02e-103 | 334 |
| MS.gene59588.t1 | AT2G32950 | 40.230 | 435 | 228 | 5 | 532 | 963 | 268 | 673 | 4.17e-102 | 334 |
| MS.gene59588.t1 | AT1G53090 | 36.287 | 474 | 256 | 9 | 338 | 776 | 148 | 610 | 1.91e-88 | 296 |
| MS.gene59588.t1 | AT1G53090 | 37.634 | 93 | 54 | 2 | 166 | 258 | 38 | 126 | 1.83e-11 | 68.6 |
| MS.gene59588.t1 | AT5G23730 | 35.714 | 336 | 175 | 14 | 651 | 960 | 41 | 361 | 2.06e-45 | 168 |
| MS.gene59588.t1 | AT5G52250 | 32.822 | 326 | 193 | 9 | 648 | 961 | 69 | 380 | 4.57e-44 | 165 |
| MS.gene59588.t1 | AT1G29260 | 26.906 | 223 | 141 | 8 | 701 | 914 | 108 | 317 | 2.29e-14 | 75.9 |
| MS.gene59588.t1 | AT2G43770 | 25.987 | 304 | 195 | 13 | 646 | 933 | 48 | 337 | 2.66e-13 | 72.8 |
Find 150 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTGTGACTTAACCTTTA+AGG | 0.103884 | 8.2:-69383162 | MS.gene59588:CDS |
| TCCATTACTATGACCCTTAA+AGG | 0.147618 | 8.2:+69383148 | None:intergenic |
| GCTTCTTTGCACTCAAATTT+TGG | 0.148667 | 8.2:+69385639 | None:intergenic |
| GTATATATTTAAACAGATTT+TGG | 0.151402 | 8.2:-69385885 | MS.gene59588:CDS |
| GAGTCAGTCGATCCCATTTC+TGG | 0.205018 | 8.2:-69382546 | MS.gene59588:CDS |
| TTTCGTTGGTTTATCTGTTT+TGG | 0.225023 | 8.2:-69383038 | MS.gene59588:CDS |
| GTTTCCTCATTGATCACTTC+TGG | 0.244539 | 8.2:+69385413 | None:intergenic |
| TTGTTTGAACGAAGATATTA+AGG | 0.291136 | 8.2:-69384559 | MS.gene59588:CDS |
| CTAGATTATGCACACCTATT+AGG | 0.295650 | 8.2:-69386459 | MS.gene59588:CDS |
| TGAATTTATACGCGAATTAG+AGG | 0.317112 | 8.2:-69384715 | MS.gene59588:CDS |
| ATAGAACCTTGAATTCTCTT+TGG | 0.319753 | 8.2:+69384252 | None:intergenic |
| GCTTGTGACTTAACCTTTAA+GGG | 0.321542 | 8.2:-69383161 | MS.gene59588:CDS |
| CAGCTTCCTTGAGCGGGCCT+TGG | 0.322871 | 8.2:+69384352 | None:intergenic |
| TCTAGTTATCCTCAATTGTT+AGG | 0.324872 | 8.2:-69386049 | MS.gene59588:CDS |
| TACATTTGCAGGGCTCATTA+TGG | 0.325837 | 8.2:+69383424 | None:intergenic |
| AAGAACTTGAATGTAGCTTT+AGG | 0.326233 | 8.2:-69386307 | MS.gene59588:CDS |
| ACTATTTGAATGACCAGAAA+TGG | 0.327746 | 8.2:+69382533 | None:intergenic |
| AAGAGAATTCAAGGTTCTAT+TGG | 0.336597 | 8.2:-69384249 | MS.gene59588:CDS |
| CATAATGCTTTACCTGGTAT+TGG | 0.338301 | 8.2:+69384886 | None:intergenic |
| TTATTCCTAACAATGTGTTT+AGG | 0.343156 | 8.2:+69386331 | None:intergenic |
| CATCACTTCAACTGTATTCA+TGG | 0.343911 | 8.2:-69385578 | MS.gene59588:CDS |
| TGAACACAGCATACATTTGC+AGG | 0.344827 | 8.2:+69383413 | None:intergenic |
| GAATTAGAGGCATCAAATTC+TGG | 0.345543 | 8.2:-69384702 | MS.gene59588:CDS |
| TGATTATGATGGTGTGGTTC+AGG | 0.361466 | 8.2:-69383923 | MS.gene59588:intron |
| TTGGGACGAGAAGACGGTTC+AGG | 0.370665 | 8.2:+69384905 | None:intergenic |
| TTTGCTTCCTTAGCTGGATC+TGG | 0.370766 | 8.2:-69386388 | MS.gene59588:CDS |
| CGTATTTAAGTCATGTCTTA+AGG | 0.371979 | 8.2:-69385720 | MS.gene59588:CDS |
| ATAATGCTTTACCTGGTATT+GGG | 0.391610 | 8.2:+69384887 | None:intergenic |
| TCATCAAATGTTTATAGCCT+TGG | 0.392309 | 8.2:-69385380 | MS.gene59588:CDS |
| CTAATAGGTGTGCATAATCT+AGG | 0.402336 | 8.2:+69386460 | None:intergenic |
| AATTTGTTTCTAGTGTCTGC+TGG | 0.402719 | 8.2:-69382494 | MS.gene59588:CDS |
| CAAGGTTCTATTGGTTGTCT+AGG | 0.404862 | 8.2:-69384240 | MS.gene59588:CDS |
| ATGATTGTTCTGTCAAACTA+TGG | 0.406776 | 8.2:-69383662 | MS.gene59588:CDS |
| CAGATCCTAAACACATTGTT+AGG | 0.406890 | 8.2:-69386336 | MS.gene59588:CDS |
| ATTTAGAGAATGTTGGTAAT+GGG | 0.407051 | 8.2:-69384275 | MS.gene59588:CDS |
| TAGATTAAGCAAAGGACAAA+AGG | 0.409406 | 8.2:-69386185 | MS.gene59588:CDS |
| CTGATAACTCTTTGAAGCTA+TGG | 0.412942 | 8.2:-69383223 | MS.gene59588:CDS |
| AAAAGGGAATTGATTCTAGA+AGG | 0.422294 | 8.2:-69386168 | MS.gene59588:CDS |
| AATCACTTGAAATAGCATTA+AGG | 0.427015 | 8.2:+69384043 | None:intergenic |
| ACCTTTAAGGGTCATAGTAA+TGG | 0.442210 | 8.2:-69383149 | MS.gene59588:CDS |
| TTGCATATACCTTCATAGAA+AGG | 0.447291 | 8.2:+69384216 | None:intergenic |
| GCTTCATCAACACATGAACT+TGG | 0.458292 | 8.2:+69384429 | None:intergenic |
| TGAAGAGACAGCATCTCTTA+AGG | 0.463340 | 8.2:-69385606 | MS.gene59588:CDS |
| TTCATCGCGGTCAAAACTTA+AGG | 0.464544 | 8.2:+69384113 | None:intergenic |
| AAAGAAAGGCTGTGCGTTGA+TGG | 0.465033 | 8.2:-69385518 | MS.gene59588:CDS |
| TTGAATAAAATTAAATACAT+TGG | 0.469482 | 8.2:-69385788 | MS.gene59588:CDS |
| CAAATCTCTGCCAGTGCCAA+TGG | 0.470603 | 8.2:-69382583 | MS.gene59588:CDS |
| CATTTAGAGAATGTTGGTAA+TGG | 0.473306 | 8.2:-69384276 | MS.gene59588:CDS |
| TGTCTAGGACCTTTCTATGA+AGG | 0.475887 | 8.2:-69384225 | MS.gene59588:CDS |
| ATTAGGAAGGAAAATGTGAT+TGG | 0.478880 | 8.2:-69386442 | MS.gene59588:CDS |
| GCTGTGCAATATTGAGTCAT+TGG | 0.479826 | 8.2:-69385032 | MS.gene59588:CDS |
| AAGGCCATCATGGCCTGTAA+TGG | 0.480729 | 8.2:-69385701 | MS.gene59588:CDS |
| TTTCTTCTCCAGAATTTCGT+TGG | 0.480988 | 8.2:-69383052 | MS.gene59588:intron |
| CGGCTGCAGCTTCCTTGAGC+GGG | 0.481237 | 8.2:+69384346 | None:intergenic |
| CTATTTGAATGACCAGAAAT+GGG | 0.481751 | 8.2:+69382534 | None:intergenic |
| TTACTGGAAGAATCATGATA+AGG | 0.482054 | 8.2:+69384471 | None:intergenic |
| TTGTGAGAAGCCATTGGCAC+TGG | 0.482764 | 8.2:+69382573 | None:intergenic |
| TTGTTTGACATCTCAACGAC+AGG | 0.486265 | 8.2:+69384003 | None:intergenic |
| GAGAAAACAGTGAAGGGAAA+GGG | 0.487106 | 8.2:-69386025 | MS.gene59588:CDS |
| GCGGCTGCAGCTTCCTTGAG+CGG | 0.488025 | 8.2:+69384345 | None:intergenic |
| TAAGACATGACAGCAAATAG+TGG | 0.492429 | 8.2:-69386535 | None:intergenic |
| TAAATGAGGCAATCTCCATC+TGG | 0.493793 | 8.2:+69384293 | None:intergenic |
| CGTCTTCTCGTCCCAATACC+AGG | 0.496888 | 8.2:-69384898 | MS.gene59588:intron |
| ATGGAACAAGGAAAATGCCT+TGG | 0.499042 | 8.2:-69385682 | MS.gene59588:CDS |
| AGAGAAAACAGTGAAGGGAA+AGG | 0.500835 | 8.2:-69386026 | MS.gene59588:CDS |
| CTTGTTGCAGCCAACTCAGT+TGG | 0.503279 | 8.2:-69382453 | MS.gene59588:CDS |
| TGTTCCATTACAGGCCATGA+TGG | 0.504473 | 8.2:+69385697 | None:intergenic |
| AATGGGCCAAAGAGAATTCA+AGG | 0.506547 | 8.2:-69384258 | MS.gene59588:CDS |
| AATCAAGGGTTGATAAAGAA+AGG | 0.507494 | 8.2:-69385532 | MS.gene59588:CDS |
| CAAAGCTCAGTTGTGTGTGC+TGG | 0.508113 | 8.2:-69383978 | MS.gene59588:CDS |
| TCACAAAATGCAAAGGAAGC+TGG | 0.517461 | 8.2:-69384950 | MS.gene59588:CDS |
| TGATAACTCTTTGAAGCTAT+GGG | 0.517563 | 8.2:-69383222 | MS.gene59588:CDS |
| CAGATGTGGGATGCAGGCAC+TGG | 0.519169 | 8.2:-69383777 | MS.gene59588:CDS |
| GTAGAAAGAAATCATTCGTA+TGG | 0.520653 | 8.2:-69384534 | MS.gene59588:CDS |
| TTCGTAACACTAAAATCCCT+TGG | 0.524049 | 8.2:-69383322 | MS.gene59588:CDS |
| TTGCCTCATTTAGAGAATGT+TGG | 0.524574 | 8.2:-69384282 | MS.gene59588:CDS |
| TGGACTCAGATGTGGGATGC+AGG | 0.524887 | 8.2:-69383783 | MS.gene59588:intron |
| TTTGGTCATCAAACACATGT+TGG | 0.526232 | 8.2:+69385756 | None:intergenic |
| ATCTAGGTGACCTTGGCAAA+GGG | 0.528356 | 8.2:+69386476 | None:intergenic |
| TTACCAACATTCTCTAAATG+AGG | 0.528415 | 8.2:+69384279 | None:intergenic |
| TCGAATTTGTGAGAAGCCAT+TGG | 0.529274 | 8.2:+69382567 | None:intergenic |
| CTTAAGACATGACTTAAATA+CGG | 0.529408 | 8.2:+69385721 | None:intergenic |
| TGGGACGAGAAGACGGTTCA+GGG | 0.532561 | 8.2:+69384906 | None:intergenic |
| CTCGTTAGATTCTGAACCAC+AGG | 0.533992 | 8.2:+69383003 | None:intergenic |
| GTCATGTCTTAAGGCCATCA+TGG | 0.534541 | 8.2:-69385711 | MS.gene59588:CDS |
| TGGAGCATCAAAAGAGAGCT+TGG | 0.534740 | 8.2:-69383734 | MS.gene59588:CDS |
| ATCCCTTGGTGTACATTACC+TGG | 0.537374 | 8.2:-69383308 | MS.gene59588:CDS |
| AATCTAGGTGACCTTGGCAA+AGG | 0.538083 | 8.2:+69386475 | None:intergenic |
| TTTCACAATTCCAACTGAGT+TGG | 0.539152 | 8.2:+69382443 | None:intergenic |
| CAATTCAGTTTGAAGAGAAG+TGG | 0.541430 | 8.2:-69385445 | MS.gene59588:CDS |
| TGGAACAAGGAAAATGCCTT+GGG | 0.542068 | 8.2:-69385681 | MS.gene59588:CDS |
| TACTTCTCCATGAGATTCCA+AGG | 0.543464 | 8.2:-69384369 | MS.gene59588:CDS |
| AGATTAAGCAAAGGACAAAA+GGG | 0.544395 | 8.2:-69386184 | MS.gene59588:CDS |
| TTAGGAGAGAAAACAGTGAA+GGG | 0.548315 | 8.2:-69386031 | MS.gene59588:CDS |
| GAGCGGGCCTTGGAATCTCA+TGG | 0.550025 | 8.2:+69384362 | None:intergenic |
| ACACTCTCAAGGGTTTGTCT+TGG | 0.554478 | 8.2:-69385846 | MS.gene59588:CDS |
| TCAGCCACTGTCTCAATACA+TGG | 0.556787 | 8.2:-69383754 | MS.gene59588:CDS |
| GATGAAGACTACATTGCAGC+AGG | 0.558236 | 8.2:-69384096 | MS.gene59588:CDS |
| GTTAGGAGAGAAAACAGTGA+AGG | 0.558574 | 8.2:-69386032 | MS.gene59588:CDS |
| TGATGCTGCCTAAAATTATG+TGG | 0.562310 | 8.2:+69386277 | None:intergenic |
| AAGCAGTGATAAAAGTGTGA+TGG | 0.568908 | 8.2:-69384319 | MS.gene59588:CDS |
| AGAACAATCATCACTTCCAC+TGG | 0.572949 | 8.2:+69383674 | None:intergenic |
| CTGGCATCTACTGATTATGA+TGG | 0.573907 | 8.2:-69383934 | MS.gene59588:CDS |
| TAAGGGTCATAGTAATGGAA+AGG | 0.576196 | 8.2:-69383144 | MS.gene59588:intron |
| GAGATTCCAAGGCCCGCTCA+AGG | 0.576812 | 8.2:-69384358 | MS.gene59588:CDS |
| AAAGTGTGATGGAAACCAGA+TGG | 0.581140 | 8.2:-69384308 | MS.gene59588:CDS |
| GTGCATAATCTAGGTGACCT+TGG | 0.583099 | 8.2:+69386469 | None:intergenic |
| AACAATGTGTTTAGGATCTG+TGG | 0.583202 | 8.2:+69386339 | None:intergenic |
| TGGTGTACATTACCTGGTCA+TGG | 0.585385 | 8.2:-69383302 | MS.gene59588:CDS |
| GCACAGGTATCTTGTTCCCA+AGG | 0.586975 | 8.2:+69385665 | None:intergenic |
| CTGGTATTGGGACGAGAAGA+CGG | 0.587976 | 8.2:+69384899 | None:intergenic |
| ATCTACTGATTATGATGGTG+TGG | 0.590834 | 8.2:-69383929 | MS.gene59588:CDS |
| AGGAGGTCCAGATCCAGCTA+AGG | 0.590988 | 8.2:+69386381 | None:intergenic |
| TCGGCTGATTACAAAGTGTA+CGG | 0.592155 | 8.2:-69383353 | MS.gene59588:CDS |
| ATGACAGCAAATAGTGGGAG+AGG | 0.595178 | 8.2:-69386529 | MS.gene59588:CDS |
| AGATAGTTCGATTGTGACGA+TGG | 0.601981 | 8.2:+69384495 | None:intergenic |
| CATAATCAGTAGATGCCAGA+TGG | 0.607853 | 8.2:+69383938 | None:intergenic |
| AAGACATGACAGCAAATAGT+GGG | 0.611577 | 8.2:-69386534 | None:intergenic |
| CTAACAGCTTTACCATGACC+AGG | 0.613394 | 8.2:+69383290 | None:intergenic |
| TTGGATGGATACATTGCCTG+TGG | 0.613457 | 8.2:-69383019 | MS.gene59588:CDS |
| GGCGATAAGACGAAACAAGA+CGG | 0.617468 | 8.2:+69385812 | None:intergenic |
| ATTATGCACACCTATTAGGA+AGG | 0.620818 | 8.2:-69386455 | MS.gene59588:CDS |
| GTTTCTATCACAAAATGCAA+AGG | 0.621901 | 8.2:-69384957 | MS.gene59588:CDS |
| TTTGAACGAAGATATTAAGG+AGG | 0.625382 | 8.2:-69384556 | MS.gene59588:CDS |
| AATTGTGAAACTACTTCAGA+TGG | 0.626139 | 8.2:-69382430 | MS.gene59588:CDS |
| ATAAAGTGAAGAAATCAGAA+AGG | 0.626505 | 8.2:-69385910 | MS.gene59588:CDS |
| TCATGGCCTGTAATGGAACA+AGG | 0.631186 | 8.2:-69385694 | MS.gene59588:CDS |
| GAAGACTACATTGCAGCAGG+TGG | 0.632505 | 8.2:-69384093 | MS.gene59588:CDS |
| TGCTGCCTAAAATTATGTGG+AGG | 0.638027 | 8.2:+69386280 | None:intergenic |
| AAATCAATGACCCTTTGCCA+AGG | 0.639148 | 8.2:-69386486 | MS.gene59588:CDS |
| TTGTTTCTAGTGTCTGCTGG+AGG | 0.648602 | 8.2:-69382491 | MS.gene59588:CDS |
| TACAGCAAGTTCGAAGAGCG+CGG | 0.652487 | 8.2:-69384183 | MS.gene59588:CDS |
| GCTGCCTAAAATTATGTGGA+GGG | 0.654944 | 8.2:+69386281 | None:intergenic |
| ACTTAAGGCACATATCACAT+TGG | 0.655318 | 8.2:+69384128 | None:intergenic |
| ATGGACTCAACTTAAGAGCG+TGG | 0.658372 | 8.2:-69385949 | MS.gene59588:CDS |
| TCAAATAGTAGTGATAACAA+TGG | 0.662592 | 8.2:-69382519 | MS.gene59588:CDS |
| GAACACAGCATACATTTGCA+GGG | 0.663936 | 8.2:+69383414 | None:intergenic |
| TGTTTGACATCTCAACGACA+GGG | 0.664739 | 8.2:+69384004 | None:intergenic |
| TAGCTTCAAAGAGTTATCAG+TGG | 0.667175 | 8.2:+69383226 | None:intergenic |
| AAATCACTTAGATTAAGCAA+AGG | 0.669333 | 8.2:-69386193 | MS.gene59588:CDS |
| AGACAATGTGATGTCTAGCG+CGG | 0.671840 | 8.2:-69385984 | MS.gene59588:CDS |
| GACCAGGTAATGTACACCAA+GGG | 0.678899 | 8.2:+69383306 | None:intergenic |
| TGCTCCATGTATTGAGACAG+TGG | 0.687561 | 8.2:+69383750 | None:intergenic |
| TTGTCCAGAAGTGATCAATG+AGG | 0.688486 | 8.2:-69385417 | MS.gene59588:CDS |
| TGACCAGGTAATGTACACCA+AGG | 0.691760 | 8.2:+69383305 | None:intergenic |
| AATGTGTTTAGGATCTGTGG+TGG | 0.700851 | 8.2:+69386342 | None:intergenic |
| CTGTGGTTCAGAATCTAACG+AGG | 0.708727 | 8.2:-69383002 | MS.gene59588:intron |
| ACAAGCATCAGATAACAACT+CGG | 0.717159 | 8.2:+69383178 | None:intergenic |
| CTGCAATGTAGTCTTCATCG+CGG | 0.756043 | 8.2:+69384100 | None:intergenic |
| CAAACTATGGAATATCAGCG+AGG | 0.779696 | 8.2:-69383649 | MS.gene59588:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAATAAAATTAAATACAT+TGG | - | chr8.2:69383166-69383185 | MS.gene59588:CDS | 10.0% |
| !!! | ATGTATTTAATTTTATTCAA+CGG | + | chr8.2:69383166-69383185 | None:intergenic | 10.0% |
| !!! | AAATCTTTTATTTTTTGGAT+CGG | - | chr8.2:69385582-69385601 | MS.gene59588:CDS | 15.0% |
| !!! | GTATATATTTAAACAGATTT+TGG | - | chr8.2:69383069-69383088 | MS.gene59588:intron | 15.0% |
| !!! | TATCTTTTTTTATGTATAAC+AGG | - | chr8.2:69384202-69384221 | MS.gene59588:CDS | 15.0% |
| !!! | TGAAACTTAACAAAATATTT+TGG | + | chr8.2:69383685-69383704 | None:intergenic | 15.0% |
| !! | AACAGGTTATGAATAATTAT+AGG | + | chr8.2:69383869-69383888 | None:intergenic | 20.0% |
| !! | AACATTAATATTATGTGACA+TGG | - | chr8.2:69385147-69385166 | MS.gene59588:intron | 20.0% |
| !! | ACAGGTTATGAATAATTATA+GGG | + | chr8.2:69383868-69383887 | None:intergenic | 20.0% |
| !! | AGAAGAAAAACAGTTTATTT+CGG | - | chr8.2:69383483-69383502 | MS.gene59588:intron | 20.0% |
| !! | ATTATAAGCTCTTGTATTAT+TGG | - | chr8.2:69386230-69386249 | MS.gene59588:CDS | 20.0% |
| !! | TCACTAATTAAAATAACCAT+AGG | - | chr8.2:69383702-69383721 | MS.gene59588:CDS | 20.0% |
| !! | TCCAAAAAATAAAAGATTTG+TGG | + | chr8.2:69385581-69385600 | None:intergenic | 20.0% |
| !! | TTATGAGAAACTAATTTCTT+CGG | + | chr8.2:69386094-69386113 | None:intergenic | 20.0% |
| !!! | AGATCTACTAATAATTTTAC+TGG | + | chr8.2:69384502-69384521 | None:intergenic | 20.0% |
| !!! | ATTTAAACAGATTTTGGAAT+TGG | - | chr8.2:69383075-69383094 | MS.gene59588:intron | 20.0% |
| !!! | TATAAAGCTTTTGCTAATAT+AGG | - | chr8.2:69382827-69382846 | MS.gene59588:intron | 20.0% |
| !!! | TCCACAAATCTTTTATTTTT+TGG | - | chr8.2:69385577-69385596 | MS.gene59588:CDS | 20.0% |
| !!! | TTAGTTTCTCATAATTTTTG+TGG | - | chr8.2:69386100-69386119 | MS.gene59588:CDS | 20.0% |
| !!! | TTTTTCTTTTTATCACTCTA+TGG | - | chr8.2:69386127-69386146 | MS.gene59588:CDS | 20.0% |
| ! | AAATCACTTAGATTAAGCAA+AGG | - | chr8.2:69382761-69382780 | MS.gene59588:intron | 25.0% |
| ! | AAGAAATATAACTATGTGAC+AGG | - | chr8.2:69385413-69385432 | MS.gene59588:CDS | 25.0% |
| ! | AATATTGATATTGATGTTCG+AGG | - | chr8.2:69384149-69384168 | MS.gene59588:CDS | 25.0% |
| ! | AATCACTTGAAATAGCATTA+AGG | + | chr8.2:69384914-69384933 | None:intergenic | 25.0% |
| ! | ATAAAGTGAAGAAATCAGAA+AGG | - | chr8.2:69383044-69383063 | MS.gene59588:intron | 25.0% |
| ! | ATAGCATAATTAATCCAAGT+TGG | + | chr8.2:69383803-69383822 | None:intergenic | 25.0% |
| ! | CACAATTTAATCAAACCTTT+AGG | - | chr8.2:69383734-69383753 | MS.gene59588:CDS | 25.0% |
| ! | CACTAAAATGTTAACAAAAC+AGG | + | chr8.2:69383886-69383905 | None:intergenic | 25.0% |
| ! | CAGTTATATAAAAAACCATC+TGG | - | chr8.2:69385001-69385020 | MS.gene59588:CDS | 25.0% |
| ! | CTTAAGACATGACTTAAATA+CGG | + | chr8.2:69383236-69383255 | None:intergenic | 25.0% |
| ! | GTATCAATTTCATTTCCTAA+AGG | + | chr8.2:69383752-69383771 | None:intergenic | 25.0% |
| ! | TCAAATAGTAGTGATAACAA+TGG | - | chr8.2:69386435-69386454 | MS.gene59588:CDS | 25.0% |
| ! | TGAAGAAGAAAAGAAAAAAC+AGG | - | chr8.2:69384347-69384366 | MS.gene59588:CDS | 25.0% |
| ! | TTAATATTATGTGACATGGA+TGG | - | chr8.2:69385151-69385170 | MS.gene59588:intron | 25.0% |
| ! | TTACAAAGCATAACTTACAA+TGG | - | chr8.2:69385352-69385371 | MS.gene59588:intron | 25.0% |
| ! | TTATTCCTAACAATGTGTTT+AGG | + | chr8.2:69382626-69382645 | None:intergenic | 25.0% |
| ! | TTGTTTGAACGAAGATATTA+AGG | - | chr8.2:69384395-69384414 | MS.gene59588:CDS | 25.0% |
| !! | ATATAATACATTAGTCTGTC+TGG | - | chr8.2:69386004-69386023 | MS.gene59588:CDS | 25.0% |
| !! | TTTTGCTAATATAGGCAATA+TGG | - | chr8.2:69382835-69382854 | MS.gene59588:intron | 25.0% |
| !! | TTTTTGCAGAGAAATTCTAT+AGG | - | chr8.2:69385505-69385524 | MS.gene59588:CDS | 25.0% |
| !!! | AAAATATTTTGGCTATCAAG+AGG | + | chr8.2:69383674-69383693 | None:intergenic | 25.0% |
| !!! | ATTTAGAGAATGTTGGTAAT+GGG | - | chr8.2:69384679-69384698 | MS.gene59588:CDS | 25.0% |
| !!! | CTGTTTTGTTAACATTTTAG+TGG | - | chr8.2:69383884-69383903 | MS.gene59588:intron | 25.0% |
| !!! | TTACATGTTTTATTCCAACT+TGG | - | chr8.2:69383786-69383805 | MS.gene59588:intron | 25.0% |
| AAAAATGGACATGGAATCAA+GGG | - | chr8.2:69383408-69383427 | MS.gene59588:CDS | 30.0% | |
| AAGAACTTGAATGTAGCTTT+AGG | - | chr8.2:69382647-69382666 | MS.gene59588:intron | 30.0% | |
| AAGAGAATTCAAGGTTCTAT+TGG | - | chr8.2:69384705-69384724 | MS.gene59588:CDS | 30.0% | |
| AATTGTGAAACTACTTCAGA+TGG | - | chr8.2:69386524-69386543 | MS.gene59588:CDS | 30.0% | |
| AGATTAAGCAAAGGACAAAA+GGG | - | chr8.2:69382770-69382789 | MS.gene59588:intron | 30.0% | |
| ATAATGCTTTACCTGGTATT+GGG | + | chr8.2:69384070-69384089 | None:intergenic | 30.0% | |
| ATAGAACCTTGAATTCTCTT+TGG | + | chr8.2:69384705-69384724 | None:intergenic | 30.0% | |
| ATGATTGTTCTGTCAAACTA+TGG | - | chr8.2:69385292-69385311 | MS.gene59588:intron | 30.0% | |
| ATGCTATTATTCTGAATGTG+TGG | - | chr8.2:69384109-69384128 | MS.gene59588:CDS | 30.0% | |
| ATTAGGAAGGAAAATGTGAT+TGG | - | chr8.2:69382512-69382531 | MS.gene59588:CDS | 30.0% | |
| CGTATTTAAGTCATGTCTTA+AGG | - | chr8.2:69383234-69383253 | MS.gene59588:CDS | 30.0% | |
| GAAAAAACAGGAAGCTAAAT+TGG | - | chr8.2:69384359-69384378 | MS.gene59588:CDS | 30.0% | |
| GTAGAAAGAAATCATTCGTA+TGG | - | chr8.2:69384420-69384439 | MS.gene59588:CDS | 30.0% | |
| GTTTCTATCACAAAATGCAA+AGG | - | chr8.2:69383997-69384016 | MS.gene59588:CDS | 30.0% | |
| TAGATTAAGCAAAGGACAAA+AGG | - | chr8.2:69382769-69382788 | MS.gene59588:intron | 30.0% | |
| TCATCAAATGTTTATAGCCT+TGG | - | chr8.2:69383574-69383593 | MS.gene59588:intron | 30.0% | |
| TCTAGTTATCCTCAATTGTT+AGG | - | chr8.2:69382905-69382924 | MS.gene59588:intron | 30.0% | |
| TGAATTTATACGCGAATTAG+AGG | - | chr8.2:69384239-69384258 | MS.gene59588:CDS | 30.0% | |
| TTACCAACATTCTCTAAATG+AGG | + | chr8.2:69384678-69384697 | None:intergenic | 30.0% | |
| TTACTGGAAGAATCATGATA+AGG | + | chr8.2:69384486-69384505 | None:intergenic | 30.0% | |
| TTGCATATACCTTCATAGAA+AGG | + | chr8.2:69384741-69384760 | None:intergenic | 30.0% | |
| TTTGAACGAAGATATTAAGG+AGG | - | chr8.2:69384398-69384417 | MS.gene59588:CDS | 30.0% | |
| ! | AAAAGGGAATTGATTCTAGA+AGG | - | chr8.2:69382786-69382805 | MS.gene59588:intron | 30.0% |
| ! | ATACGGTGAAACATGATTTT+TGG | + | chr8.2:69383219-69383238 | None:intergenic | 30.0% |
| ! | ATCACATTTTCCTTCCTAAT+AGG | + | chr8.2:69382512-69382531 | None:intergenic | 30.0% |
| ! | CATTTAGAGAATGTTGGTAA+TGG | - | chr8.2:69384678-69384697 | MS.gene59588:CDS | 30.0% |
| ! | GCATTTTGTGATAGAAACTT+TGG | + | chr8.2:69383995-69384014 | None:intergenic | 30.0% |
| ! | TCTGAATGTGTGGTTTTTAA+TGG | - | chr8.2:69384119-69384138 | MS.gene59588:CDS | 30.0% |
| ! | TTTTGTGATAGAAACTTTGG+CGG | + | chr8.2:69383992-69384011 | None:intergenic | 30.0% |
| !! | AATCAAGGGTTGATAAAGAA+AGG | - | chr8.2:69383422-69383441 | MS.gene59588:CDS | 30.0% |
| !! | TGATAACTCTTTGAAGCTAT+GGG | - | chr8.2:69385732-69385751 | MS.gene59588:CDS | 30.0% |
| !!! | CTCTATTTTTTCTACCTTTC+AGG | - | chr8.2:69386335-69386354 | MS.gene59588:CDS | 30.0% |
| !!! | TTTCGTTGGTTTATCTGTTT+TGG | - | chr8.2:69385916-69385935 | MS.gene59588:CDS | 30.0% |
| AATTGTGCATAACAGTCCTA+TGG | + | chr8.2:69383721-69383740 | None:intergenic | 35.0% | |
| ACAAGCATCAGATAACAACT+CGG | + | chr8.2:69385779-69385798 | None:intergenic | 35.0% | |
| ACTTAAGGCACATATCACAT+TGG | + | chr8.2:69384829-69384848 | None:intergenic | 35.0% | |
| ATTATGCACACCTATTAGGA+AGG | - | chr8.2:69382499-69382518 | MS.gene59588:CDS | 35.0% | |
| CAAAAATGGACATGGAATCA+AGG | - | chr8.2:69383407-69383426 | MS.gene59588:CDS | 35.0% | |
| CAATTCAGTTTGAAGAGAAG+TGG | - | chr8.2:69383509-69383528 | MS.gene59588:intron | 35.0% | |
| CAGATAAACCAACGAAATTC+TGG | + | chr8.2:69385913-69385932 | None:intergenic | 35.0% | |
| CAGATCCTAAACACATTGTT+AGG | - | chr8.2:69382618-69382637 | MS.gene59588:intron | 35.0% | |
| CATAATGCTTTACCTGGTAT+TGG | + | chr8.2:69384071-69384090 | None:intergenic | 35.0% | |
| CATCACTTCAACTGTATTCA+TGG | - | chr8.2:69383376-69383395 | MS.gene59588:CDS | 35.0% | |
| CTAATAGGTGTGCATAATCT+AGG | + | chr8.2:69382497-69382516 | None:intergenic | 35.0% | |
| CTAGATTATGCACACCTATT+AGG | - | chr8.2:69382495-69382514 | MS.gene59588:CDS | 35.0% | |
| CTATCAAGAGGAAATTATGC+AGG | + | chr8.2:69383662-69383681 | None:intergenic | 35.0% | |
| GAACAAAAACTAGTACTAGG+AGG | + | chr8.2:69382593-69382612 | None:intergenic | 35.0% | |
| GAGGAAATTATGCAGGATAA+AGG | + | chr8.2:69383655-69383674 | None:intergenic | 35.0% | |
| GCTTGTGACTTAACCTTTAA+GGG | - | chr8.2:69385793-69385812 | MS.gene59588:CDS | 35.0% | |
| GTGATAACAGTAAACCTGAA+AGG | + | chr8.2:69386352-69386371 | None:intergenic | 35.0% | |
| GTGGAACAAAAACTAGTACT+AGG | + | chr8.2:69382596-69382615 | None:intergenic | 35.0% | |
| TAGCTTCAAAGAGTTATCAG+TGG | + | chr8.2:69385731-69385750 | None:intergenic | 35.0% | |
| TCCATTACTATGACCCTTAA+AGG | + | chr8.2:69385809-69385828 | None:intergenic | 35.0% | |
| TGATGCTGCCTAAAATTATG+TGG | + | chr8.2:69382680-69382699 | None:intergenic | 35.0% | |
| TGCTTGTGACTTAACCTTTA+AGG | - | chr8.2:69385792-69385811 | MS.gene59588:CDS | 35.0% | |
| TTAGGAGAGAAAACAGTGAA+GGG | - | chr8.2:69382923-69382942 | MS.gene59588:intron | 35.0% | |
| TTCGTAACACTAAAATCCCT+TGG | - | chr8.2:69385632-69385651 | MS.gene59588:CDS | 35.0% | |
| TTGCCTCATTTAGAGAATGT+TGG | - | chr8.2:69384672-69384691 | MS.gene59588:CDS | 35.0% | |
| TTTCACAATTCCAACTGAGT+TGG | + | chr8.2:69386514-69386533 | None:intergenic | 35.0% | |
| TTTCTTCTCCAGAATTTCGT+TGG | - | chr8.2:69385902-69385921 | MS.gene59588:CDS | 35.0% | |
| TTTGGTCATCAAACACATGT+TGG | + | chr8.2:69383201-69383220 | None:intergenic | 35.0% | |
| ! | AACAATGTGTTTAGGATCTG+TGG | + | chr8.2:69382618-69382637 | None:intergenic | 35.0% |
| ! | AAGCAGTGATAAAAGTGTGA+TGG | - | chr8.2:69384635-69384654 | MS.gene59588:CDS | 35.0% |
| ! | ACCTTTAAGGGTCATAGTAA+TGG | - | chr8.2:69385805-69385824 | MS.gene59588:CDS | 35.0% |
| ! | AGAAATTTTGCTTCCTTAGC+TGG | - | chr8.2:69382560-69382579 | MS.gene59588:CDS | 35.0% |
| ! | ATAATTTTAGGCAGCATCAG+AGG | - | chr8.2:69382681-69382700 | MS.gene59588:intron | 35.0% |
| ! | ATCTACTGATTATGATGGTG+TGG | - | chr8.2:69385025-69385044 | MS.gene59588:CDS | 35.0% |
| ! | ATGTGTATCTTTTGATCCCA+CGG | + | chr8.2:69386295-69386314 | None:intergenic | 35.0% |
| ! | CACACTTTTATCACTGCTTT+TGG | + | chr8.2:69384634-69384653 | None:intergenic | 35.0% |
| ! | CATTTTCCTTGTTCCATTAC+AGG | + | chr8.2:69383269-69383288 | None:intergenic | 35.0% |
| ! | GCTTCTTTGCACTCAAATTT+TGG | + | chr8.2:69383318-69383337 | None:intergenic | 35.0% |
| ! | GTATCCCTCCACATAATTTT+AGG | - | chr8.2:69382669-69382688 | MS.gene59588:intron | 35.0% |
| ! | GTTTTCTCTCCTAACAATTG+AGG | + | chr8.2:69382917-69382936 | None:intergenic | 35.0% |
| ! | TAAGGGTCATAGTAATGGAA+AGG | - | chr8.2:69385810-69385829 | MS.gene59588:CDS | 35.0% |
| ! | TTATCACTCTATGGCGTTTT+AGG | - | chr8.2:69386136-69386155 | MS.gene59588:CDS | 35.0% |
| ! | TTCCACTGGCAAACATTTTT+GGG | + | chr8.2:69385269-69385288 | None:intergenic | 35.0% |
| ! | TTGATTTTGCACACTCTCAA+GGG | - | chr8.2:69383098-69383117 | MS.gene59588:intron | 35.0% |
| !! | AATTTGTTTCTAGTGTCTGC+TGG | - | chr8.2:69386460-69386479 | MS.gene59588:CDS | 35.0% |
| !! | ACTTTTATCACTGCTTTTGG+CGG | + | chr8.2:69384631-69384650 | None:intergenic | 35.0% |
| !! | CTGATAACTCTTTGAAGCTA+TGG | - | chr8.2:69385731-69385750 | MS.gene59588:CDS | 35.0% |
| !! | GAATTAGAGGCATCAAATTC+TGG | - | chr8.2:69384252-69384271 | MS.gene59588:CDS | 35.0% |
| !! | GTTGGTTTATCTGTTTTGGA+TGG | - | chr8.2:69385920-69385939 | MS.gene59588:CDS | 35.0% |
| AAATCAATGACCCTTTGCCA+AGG | - | chr8.2:69382468-69382487 | MS.gene59588:CDS | 40.0% | |
| AATGGGCCAAAGAGAATTCA+AGG | - | chr8.2:69384696-69384715 | MS.gene59588:CDS | 40.0% | |
| AGAACAATCATCACTTCCAC+TGG | + | chr8.2:69385283-69385302 | None:intergenic | 40.0% | |
| AGAGAAAACAGTGAAGGGAA+AGG | - | chr8.2:69382928-69382947 | MS.gene59588:intron | 40.0% | |
| AGATAGTTCGATTGTGACGA+TGG | + | chr8.2:69384462-69384481 | None:intergenic | 40.0% | |
| ATGGAACAAGGAAAATGCCT+TGG | - | chr8.2:69383272-69383291 | MS.gene59588:CDS | 40.0% | |
| CAAACTATGGAATATCAGCG+AGG | - | chr8.2:69385305-69385324 | MS.gene59588:intron | 40.0% | |
| CATAATCAGTAGATGCCAGA+TGG | + | chr8.2:69385019-69385038 | None:intergenic | 40.0% | |
| CCTCAAAAAGAAGAACTCCA+AGG | + | chr8.2:69383594-69383613 | None:intergenic | 40.0% | |
| CTGTGACACAAAAATGGACA+TGG | - | chr8.2:69383399-69383418 | MS.gene59588:CDS | 40.0% | |
| GAACACAGCATACATTTGCA+GGG | + | chr8.2:69385543-69385562 | None:intergenic | 40.0% | |
| GAGAAAACAGTGAAGGGAAA+GGG | - | chr8.2:69382929-69382948 | MS.gene59588:intron | 40.0% | |
| GCTGCCTAAAATTATGTGGA+GGG | + | chr8.2:69382676-69382695 | None:intergenic | 40.0% | |
| GCTGTGCAATATTGAGTCAT+TGG | - | chr8.2:69383922-69383941 | MS.gene59588:intron | 40.0% | |
| GCTTCATCAACACATGAACT+TGG | + | chr8.2:69384528-69384547 | None:intergenic | 40.0% | |
| GTTAGGAGAGAAAACAGTGA+AGG | - | chr8.2:69382922-69382941 | MS.gene59588:intron | 40.0% | |
| GTTTCCTCATTGATCACTTC+TGG | + | chr8.2:69383544-69383563 | None:intergenic | 40.0% | |
| TAAATGAGGCAATCTCCATC+TGG | + | chr8.2:69384664-69384683 | None:intergenic | 40.0% | |
| TACATTTGCAGGGCTCATTA+TGG | + | chr8.2:69385533-69385552 | None:intergenic | 40.0% | |
| TACTTCTCCATGAGATTCCA+AGG | - | chr8.2:69384585-69384604 | MS.gene59588:CDS | 40.0% | |
| TCACAAAATGCAAAGGAAGC+TGG | - | chr8.2:69384004-69384023 | MS.gene59588:CDS | 40.0% | |
| TCATGGCTGTGACACAAAAA+TGG | - | chr8.2:69383393-69383412 | MS.gene59588:CDS | 40.0% | |
| TCGAATTTGTGAGAAGCCAT+TGG | + | chr8.2:69386390-69386409 | None:intergenic | 40.0% | |
| TCGGCTGATTACAAAGTGTA+CGG | - | chr8.2:69385601-69385620 | MS.gene59588:CDS | 40.0% | |
| TGAACACAGCATACATTTGC+AGG | + | chr8.2:69385544-69385563 | None:intergenic | 40.0% | |
| TGAAGAGACAGCATCTCTTA+AGG | - | chr8.2:69383348-69383367 | MS.gene59588:CDS | 40.0% | |
| TGCTGCCTAAAATTATGTGG+AGG | + | chr8.2:69382677-69382696 | None:intergenic | 40.0% | |
| TGGAACAAGGAAAATGCCTT+GGG | - | chr8.2:69383273-69383292 | MS.gene59588:CDS | 40.0% | |
| TGTTTGACATCTCAACGACA+GGG | + | chr8.2:69384953-69384972 | None:intergenic | 40.0% | |
| TTCATCGCGGTCAAAACTTA+AGG | + | chr8.2:69384844-69384863 | None:intergenic | 40.0% | |
| TTGAATTCGACATCAACCGT+GGG | - | chr8.2:69386276-69386295 | MS.gene59588:CDS | 40.0% | |
| TTGTCCAGAAGTGATCAATG+AGG | - | chr8.2:69383537-69383556 | MS.gene59588:intron | 40.0% | |
| TTGTTTGACATCTCAACGAC+AGG | + | chr8.2:69384954-69384973 | None:intergenic | 40.0% | |
| ! | AAAGTGTGATGGAAACCAGA+TGG | - | chr8.2:69384646-69384665 | MS.gene59588:CDS | 40.0% |
| ! | AATGTGTTTAGGATCTGTGG+TGG | + | chr8.2:69382615-69382634 | None:intergenic | 40.0% |
| ! | CAAGGTTCTATTGGTTGTCT+AGG | - | chr8.2:69384714-69384733 | MS.gene59588:CDS | 40.0% |
| ! | CCTTGGAGTTCTTCTTTTTG+AGG | - | chr8.2:69383591-69383610 | MS.gene59588:intron | 40.0% |
| ! | CTGGCATCTACTGATTATGA+TGG | - | chr8.2:69385020-69385039 | MS.gene59588:CDS | 40.0% |
| ! | CTTCCACTGGCAAACATTTT+TGG | + | chr8.2:69385270-69385289 | None:intergenic | 40.0% |
| ! | GGTCATAGTAATGGAAAGGT+TGG | - | chr8.2:69385814-69385833 | MS.gene59588:CDS | 40.0% |
| ! | TGATTATGATGGTGTGGTTC+AGG | - | chr8.2:69385031-69385050 | MS.gene59588:CDS | 40.0% |
| ! | TGTCTAGGACCTTTCTATGA+AGG | - | chr8.2:69384729-69384748 | MS.gene59588:CDS | 40.0% |
| !! | ACTCAAATTTTGGCATGCAC+AGG | + | chr8.2:69383308-69383327 | None:intergenic | 40.0% |
| !! | GTTGATTTTGCACACTCTCA+AGG | - | chr8.2:69383097-69383116 | MS.gene59588:intron | 40.0% |
| !!! | ACTGGCAAACATTTTTGGGT+CGG | + | chr8.2:69385265-69385284 | None:intergenic | 40.0% |
| !!! | AGGAAGCTGGTTTTTGTCTA+TGG | - | chr8.2:69384017-69384036 | MS.gene59588:CDS | 40.0% |
| AAAGAAAGGCTGTGCGTTGA+TGG | - | chr8.2:69383436-69383455 | MS.gene59588:CDS | 45.0% | |
| AATCTAGGTGACCTTGGCAA+AGG | + | chr8.2:69382482-69382501 | None:intergenic | 45.0% | |
| ACACTCTCAAGGGTTTGTCT+TGG | - | chr8.2:69383108-69383127 | MS.gene59588:intron | 45.0% | |
| AGACAATGTGATGTCTAGCG+CGG | - | chr8.2:69382970-69382989 | MS.gene59588:intron | 45.0% | |
| ATCTAGGTGACCTTGGCAAA+GGG | + | chr8.2:69382481-69382500 | None:intergenic | 45.0% | |
| ATGGACTCAACTTAAGAGCG+TGG | - | chr8.2:69383005-69383024 | MS.gene59588:CDS | 45.0% | |
| CAGCAGCATAATGCTTTACC+TGG | + | chr8.2:69384077-69384096 | None:intergenic | 45.0% | |
| CTAACAGCTTTACCATGACC+AGG | + | chr8.2:69385667-69385686 | None:intergenic | 45.0% | |
| CTCGTTAGATTCTGAACCAC+AGG | + | chr8.2:69385954-69385973 | None:intergenic | 45.0% | |
| CTGCAATGTAGTCTTCATCG+CGG | + | chr8.2:69384857-69384876 | None:intergenic | 45.0% | |
| CTGTGGTTCAGAATCTAACG+AGG | - | chr8.2:69385952-69385971 | MS.gene59588:CDS | 45.0% | |
| GACCAGGTAATGTACACCAA+GGG | + | chr8.2:69385651-69385670 | None:intergenic | 45.0% | |
| GACCCAAAAATGTTTGCCAG+TGG | - | chr8.2:69385264-69385283 | MS.gene59588:intron | 45.0% | |
| GATGAAGACTACATTGCAGC+AGG | - | chr8.2:69384858-69384877 | MS.gene59588:intron | 45.0% | |
| GGCGATAAGACGAAACAAGA+CGG | + | chr8.2:69383145-69383164 | None:intergenic | 45.0% | |
| GTCATGTCTTAAGGCCATCA+TGG | - | chr8.2:69383243-69383262 | MS.gene59588:CDS | 45.0% | |
| GTGCATAATCTAGGTGACCT+TGG | + | chr8.2:69382488-69382507 | None:intergenic | 45.0% | |
| GTTGAATTCGACATCAACCG+TGG | - | chr8.2:69386275-69386294 | MS.gene59588:CDS | 45.0% | |
| TCAGCCACTGTCTCAATACA+TGG | - | chr8.2:69385200-69385219 | MS.gene59588:intron | 45.0% | |
| TGACCAGGTAATGTACACCA+AGG | + | chr8.2:69385652-69385671 | None:intergenic | 45.0% | |
| TGCTCCATGTATTGAGACAG+TGG | + | chr8.2:69385207-69385226 | None:intergenic | 45.0% | |
| TGGTGTACATTACCTGGTCA+TGG | - | chr8.2:69385652-69385671 | MS.gene59588:CDS | 45.0% | |
| TGTTCCATTACAGGCCATGA+TGG | + | chr8.2:69383260-69383279 | None:intergenic | 45.0% | |
| TTCTTCGGCTAAATGTAGCG+CGG | + | chr8.2:69386079-69386098 | None:intergenic | 45.0% | |
| TTGGATGGATACATTGCCTG+TGG | - | chr8.2:69385935-69385954 | MS.gene59588:CDS | 45.0% | |
| TTTGCTTCCTTAGCTGGATC+TGG | - | chr8.2:69382566-69382585 | MS.gene59588:CDS | 45.0% | |
| ! | ACATGGATGGACTCAGATGT+GGG | - | chr8.2:69385164-69385183 | MS.gene59588:intron | 45.0% |
| ! | ATCCCTTGGTGTACATTACC+TGG | - | chr8.2:69385646-69385665 | MS.gene59588:CDS | 45.0% |
| ! | ATGACAGCAAATAGTGGGAG+AGG | - | chr8.2:69382425-69382444 | MS.gene59588:CDS | 45.0% |
| ! | CATTAGTCTGTCTGGATCTC+TGG | - | chr8.2:69386012-69386031 | MS.gene59588:CDS | 45.0% |
| ! | TCATGGCCTGTAATGGAACA+AGG | - | chr8.2:69383260-69383279 | MS.gene59588:CDS | 45.0% |
| ! | TGGAGCATCAAAAGAGAGCT+TGG | - | chr8.2:69385220-69385239 | MS.gene59588:intron | 45.0% |
| !! | TTGTTTCTAGTGTCTGCTGG+AGG | - | chr8.2:69386463-69386482 | MS.gene59588:CDS | 45.0% |
| !!! | AGCGCGGAATGTTTTAACGA+TGG | - | chr8.2:69382986-69383005 | MS.gene59588:intron | 45.0% |
| AAGGCCATCATGGCCTGTAA+TGG | - | chr8.2:69383253-69383272 | MS.gene59588:CDS | 50.0% | |
| CAAAGCTCAGTTGTGTGTGC+TGG | - | chr8.2:69384976-69384995 | MS.gene59588:CDS | 50.0% | |
| CAAATCTCTGCCAGTGCCAA+TGG | - | chr8.2:69386371-69386390 | MS.gene59588:CDS | 50.0% | |
| CTTGTTGCAGCCAACTCAGT+TGG | - | chr8.2:69386501-69386520 | MS.gene59588:CDS | 50.0% | |
| GAAGACTACATTGCAGCAGG+TGG | - | chr8.2:69384861-69384880 | MS.gene59588:intron | 50.0% | |
| GCACAGGTATCTTGTTCCCA+AGG | + | chr8.2:69383292-69383311 | None:intergenic | 50.0% | |
| TACAGCAAGTTCGAAGAGCG+CGG | - | chr8.2:69384771-69384790 | MS.gene59588:intron | 50.0% | |
| TGAGCTGATTGTGTCGTGAG+AGG | - | chr8.2:69386035-69386054 | MS.gene59588:CDS | 50.0% | |
| TTGTGAGAAGCCATTGGCAC+TGG | + | chr8.2:69386384-69386403 | None:intergenic | 50.0% | |
| ! | CTGGTATTGGGACGAGAAGA+CGG | + | chr8.2:69384058-69384077 | None:intergenic | 50.0% |
| ! | GACATGGATGGACTCAGATG+TGG | - | chr8.2:69385163-69385182 | MS.gene59588:intron | 50.0% |
| AGGAGGTCCAGATCCAGCTA+AGG | + | chr8.2:69382576-69382595 | None:intergenic | 55.0% | |
| CGTCTTCTCGTCCCAATACC+AGG | - | chr8.2:69384056-69384075 | MS.gene59588:CDS | 55.0% | |
| TGGACTCAGATGTGGGATGC+AGG | - | chr8.2:69385171-69385190 | MS.gene59588:intron | 55.0% | |
| TGGGACGAGAAGACGGTTCA+GGG | + | chr8.2:69384051-69384070 | None:intergenic | 55.0% | |
| TTGGGACGAGAAGACGGTTC+AGG | + | chr8.2:69384052-69384071 | None:intergenic | 55.0% | |
| CAGATGTGGGATGCAGGCAC+TGG | - | chr8.2:69385177-69385196 | MS.gene59588:intron | 60.0% | |
| GAGATTCCAAGGCCCGCTCA+AGG | - | chr8.2:69384596-69384615 | MS.gene59588:CDS | 60.0% | |
| GAGCGGGCCTTGGAATCTCA+TGG | + | chr8.2:69384595-69384614 | None:intergenic | 60.0% | |
| CAGCTTCCTTGAGCGGGCCT+TGG | + | chr8.2:69384605-69384624 | None:intergenic | 65.0% | |
| CGGCTGCAGCTTCCTTGAGC+GGG | + | chr8.2:69384611-69384630 | None:intergenic | 65.0% | |
| GCGGCTGCAGCTTCCTTGAG+CGG | + | chr8.2:69384612-69384631 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 69382425 | 69386551 | 69382425 | ID=MS.gene59588 |
| chr8.2 | mRNA | 69382425 | 69386551 | 69382425 | ID=MS.gene59588.t1;Parent=MS.gene59588 |
| chr8.2 | exon | 69385364 | 69386551 | 69385364 | ID=MS.gene59588.t1.exon1;Parent=MS.gene59588.t1 |
| chr8.2 | CDS | 69385364 | 69386551 | 69385364 | ID=cds.MS.gene59588.t1;Parent=MS.gene59588.t1 |
| chr8.2 | exon | 69384899 | 69385056 | 69384899 | ID=MS.gene59588.t1.exon2;Parent=MS.gene59588.t1 |
| chr8.2 | CDS | 69384899 | 69385056 | 69384899 | ID=cds.MS.gene59588.t1;Parent=MS.gene59588.t1 |
| chr8.2 | exon | 69383924 | 69384752 | 69383924 | ID=MS.gene59588.t1.exon3;Parent=MS.gene59588.t1 |
| chr8.2 | CDS | 69383924 | 69384752 | 69383924 | ID=cds.MS.gene59588.t1;Parent=MS.gene59588.t1 |
| chr8.2 | exon | 69383650 | 69383796 | 69383650 | ID=MS.gene59588.t1.exon4;Parent=MS.gene59588.t1 |
| chr8.2 | CDS | 69383650 | 69383796 | 69383650 | ID=cds.MS.gene59588.t1;Parent=MS.gene59588.t1 |
| chr8.2 | exon | 69383145 | 69383462 | 69383145 | ID=MS.gene59588.t1.exon5;Parent=MS.gene59588.t1 |
| chr8.2 | CDS | 69383145 | 69383462 | 69383145 | ID=cds.MS.gene59588.t1;Parent=MS.gene59588.t1 |
| chr8.2 | exon | 69383003 | 69383062 | 69383003 | ID=MS.gene59588.t1.exon6;Parent=MS.gene59588.t1 |
| chr8.2 | CDS | 69383003 | 69383062 | 69383003 | ID=cds.MS.gene59588.t1;Parent=MS.gene59588.t1 |
| chr8.2 | exon | 69382425 | 69382619 | 69382425 | ID=MS.gene59588.t1.exon7;Parent=MS.gene59588.t1 |
| chr8.2 | CDS | 69382425 | 69382619 | 69382425 | ID=cds.MS.gene59588.t1;Parent=MS.gene59588.t1 |
| Gene Sequence |
| Protein sequence |
