Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65296.t1 | XP_003606497.2 | 97 | 135 | 4 | 0 | 1 | 135 | 51 | 185 | 1.30E-71 | 278.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65296.t1 | Q2KIP8 | 41.6 | 137 | 76 | 2 | 1 | 134 | 83 | 218 | 7.2e-23 | 108.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65296.t1 | G7JRH2 | 97.0 | 135 | 4 | 0 | 1 | 135 | 51 | 185 | 9.2e-72 | 278.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene65296 | 0.803289 | 3.74E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene65296 | 0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene65296 | 0.80775 | 4.34E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene65296 | 0.802593 | 5.21E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene65296 | 0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene65296 | 0.80142 | 9.08E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene65296 | 0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene65296 | 0.829299 | 5.56E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene65296 | 0.801963 | 7.03E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene65296 | 0.818465 | 1.93E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene65296 | 0.814901 | 1.22E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene65296 | 0.835719 | 1.42E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene65296 | 0.800218 | 1.60E-48 | -1.69E-46 |
| MS.gene059023 | MS.gene65296 | 0.817767 | 2.78E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene65296 | 0.806536 | 7.84E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene65296 | 0.824168 | 9.34E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene65296 | 0.8019 | 7.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 38 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAATCATAATAACTAAA+TGG | 0.223354 | 4.3:-41499126 | None:intergenic |
| ATATTCTTCTCCTTTATAAT+TGG | 0.246163 | 4.3:-41499078 | None:intergenic |
| TCTTCAATGTGCTGCATTCT+TGG | 0.260285 | 4.3:+41497239 | MS.gene65296:CDS |
| ACTTTGTCCTTGCCATTGTC+AGG | 0.275430 | 4.3:+41497437 | MS.gene65296:CDS |
| GCTTGGGAAATTGTCCTTCT+TGG | 0.285396 | 4.3:+41498703 | MS.gene65296:CDS |
| TATCCTGTGGGAGTGTTTCC+TGG | 0.286736 | 4.3:+41498882 | MS.gene65296:CDS |
| CTTCTTGGATGACCTATATC+AGG | 0.387626 | 4.3:+41498718 | MS.gene65296:CDS |
| CGTTGCTTCCTTTGATGCAA+TGG | 0.387638 | 4.3:+41497401 | MS.gene65296:CDS |
| GTTGCTTCCTTTGATGCAAT+GGG | 0.387839 | 4.3:+41497402 | MS.gene65296:CDS |
| GCATTATGCTTTCAGTTGCT+TGG | 0.401661 | 4.3:+41498686 | MS.gene65296:CDS |
| CATTATGCTTTCAGTTGCTT+GGG | 0.402222 | 4.3:+41498687 | MS.gene65296:CDS |
| CCAGGCGCTTCCAATTATAA+AGG | 0.426455 | 4.3:+41499068 | MS.gene65296:CDS |
| TAGTTATTATGATTTCCTTA+AGG | 0.432805 | 4.3:+41499131 | MS.gene65296:CDS |
| GGAAATCATAATAACTAAAT+GGG | 0.435335 | 4.3:-41499125 | None:intergenic |
| CTTTGTCCTTGCCATTGTCA+GGG | 0.439962 | 4.3:+41497438 | MS.gene65296:CDS |
| CTTCCTCCCCATTGCATCAA+AGG | 0.457528 | 4.3:-41497409 | None:intergenic |
| CTTTGATGCAATGGGGAGGA+AGG | 0.495138 | 4.3:+41497410 | MS.gene65296:CDS |
| CCTTTATAATTGGAAGCGCC+TGG | 0.502979 | 4.3:-41499068 | None:intergenic |
| GTTTATTGTGATTTATCCTG+TGG | 0.508886 | 4.3:+41498869 | MS.gene65296:CDS |
| GAAGTTATACACGGTGCCAT+TGG | 0.515549 | 4.3:+41497261 | MS.gene65296:CDS |
| ACTAAATGGGAGGCTTGAAA+AGG | 0.523268 | 4.3:-41499112 | None:intergenic |
| TGCAGTATGGTTGATGTACC+AGG | 0.524168 | 4.3:+41499050 | MS.gene65296:intron |
| CTGATATAGGTCATCCAAGA+AGG | 0.541355 | 4.3:-41498717 | None:intergenic |
| CATATGAACTCACTTTCTCC+AGG | 0.542825 | 4.3:-41498900 | None:intergenic |
| TTTGTCCTTGCCATTGTCAG+GGG | 0.543762 | 4.3:+41497439 | MS.gene65296:CDS |
| CATTGTCAGGGGAATTCATG+AGG | 0.560461 | 4.3:+41497450 | MS.gene65296:CDS |
| AAAGGAAGCAACGCTCCGCT+CGG | 0.563622 | 4.3:-41497391 | None:intergenic |
| TTTATTGTGATTTATCCTGT+GGG | 0.570256 | 4.3:+41498870 | MS.gene65296:CDS |
| CTCATGAATTCCCCTGACAA+TGG | 0.606474 | 4.3:-41497449 | None:intergenic |
| TCTCCAGGAAACACTCCCAC+AGG | 0.614332 | 4.3:-41498885 | None:intergenic |
| CTTCCTTTGATGCAATGGGG+AGG | 0.617578 | 4.3:+41497406 | MS.gene65296:CDS |
| AATCATAATAACTAAATGGG+AGG | 0.632223 | 4.3:-41499122 | None:intergenic |
| GAATTCCCCTGACAATGGCA+AGG | 0.640571 | 4.3:-41497444 | None:intergenic |
| TTGCTTCCTTTGATGCAATG+GGG | 0.657708 | 4.3:+41497403 | MS.gene65296:CDS |
| GCATTCTTGGAAGTTATACA+CGG | 0.672092 | 4.3:+41497252 | MS.gene65296:CDS |
| TCTTGCGTGGAGCATAGGCG+AGG | 0.678820 | 4.3:+41497734 | MS.gene65296:CDS |
| ATTTCAGGACTGGTTCCGAG+CGG | 0.718139 | 4.3:+41497376 | MS.gene65296:intron |
| AGGATAAATCACAATAAACG+CGG | 0.753232 | 4.3:-41498865 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTGTTTTTTTTAGAGT+TGG | + | chr4.3:41498013-41498032 | MS.gene65296:intron | 15.0% |
| !!! | TATTTGTTTTTTTTAGAGTT+GGG | + | chr4.3:41498014-41498033 | MS.gene65296:intron | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | - | chr4.3:41498459-41498478 | None:intergenic | 15.0% |
| !!! | TTCTTTATCTTTTGATTATT+AGG | + | chr4.3:41498838-41498857 | MS.gene65296:intron | 15.0% |
| !! | AGCAAAAAAGAAAAAGAAAA+AGG | - | chr4.3:41498383-41498402 | None:intergenic | 20.0% |
| !! | AGGAAATCATAATAACTAAA+TGG | - | chr4.3:41499129-41499148 | None:intergenic | 20.0% |
| !! | ATATTCTTCTCCTTTATAAT+TGG | - | chr4.3:41499081-41499100 | None:intergenic | 20.0% |
| !! | GGAAATCATAATAACTAAAT+GGG | - | chr4.3:41499128-41499147 | None:intergenic | 20.0% |
| !! | TAGTTATTATGATTTCCTTA+AGG | + | chr4.3:41499131-41499150 | MS.gene65296:CDS | 20.0% |
| !! | TATGACTTATATTCAGAAAT+TGG | + | chr4.3:41497814-41497833 | MS.gene65296:intron | 20.0% |
| !!! | TAACACAATTTTTATGGATT+TGG | - | chr4.3:41498596-41498615 | None:intergenic | 20.0% |
| ! | AAACAAAACTTAACGATAAG+AGG | - | chr4.3:41498936-41498955 | None:intergenic | 25.0% |
| ! | AAATATAAAAAAACGCAGAC+AGG | - | chr4.3:41497999-41498018 | None:intergenic | 25.0% |
| ! | AACAAAACTTAACGATAAGA+GGG | - | chr4.3:41498935-41498954 | None:intergenic | 25.0% |
| ! | AATCATAATAACTAAATGGG+AGG | - | chr4.3:41499125-41499144 | None:intergenic | 25.0% |
| ! | ACTTATATTCAGAAATTGGT+GGG | + | chr4.3:41497818-41497837 | MS.gene65296:intron | 25.0% |
| ! | ATTCAAAATTACTATCGCTA+TGG | - | chr4.3:41497561-41497580 | None:intergenic | 25.0% |
| ! | CAAATCATGAAATGAATTTC+AGG | + | chr4.3:41497361-41497380 | MS.gene65296:intron | 25.0% |
| ! | CCATAAAAATTGTGTTATAG+AGG | + | chr4.3:41498599-41498618 | MS.gene65296:intron | 25.0% |
| ! | TAAAGCATATAACAGTTAGA+AGG | - | chr4.3:41497316-41497335 | None:intergenic | 25.0% |
| ! | TTGAATCCAAAATACTTATC+TGG | + | chr4.3:41497575-41497594 | MS.gene65296:intron | 25.0% |
| ! | TTTATTGTGATTTATCCTGT+GGG | + | chr4.3:41498870-41498889 | MS.gene65296:CDS | 25.0% |
| !! | CAATTTATGATAAGCATTGT+TGG | + | chr4.3:41498112-41498131 | MS.gene65296:intron | 25.0% |
| !! | CCTCTATAACACAATTTTTA+TGG | - | chr4.3:41498602-41498621 | None:intergenic | 25.0% |
| !! | TTATACCTAACTCATTTTCA+TGG | + | chr4.3:41498553-41498572 | MS.gene65296:intron | 25.0% |
| AACAGTTTAAACAGAAAGCA+AGG | - | chr4.3:41498069-41498088 | None:intergenic | 30.0% | |
| AGGATAAATCACAATAAACG+CGG | - | chr4.3:41498868-41498887 | None:intergenic | 30.0% | |
| AGTTAGGTATAAATGAAGCA+CGG | - | chr4.3:41498545-41498564 | None:intergenic | 30.0% | |
| ATCCAAAATACTTATCTGGT+AGG | + | chr4.3:41497579-41497598 | MS.gene65296:intron | 30.0% | |
| CGCAAGAAAAGTGATAAAAA+CGG | - | chr4.3:41497721-41497740 | None:intergenic | 30.0% | |
| GACTTATATTCAGAAATTGG+TGG | + | chr4.3:41497817-41497836 | MS.gene65296:intron | 30.0% | |
| GATAGAAAAATGCCTGATAT+AGG | - | chr4.3:41498733-41498752 | None:intergenic | 30.0% | |
| GCAAGAAAAGTGATAAAAAC+GGG | - | chr4.3:41497720-41497739 | None:intergenic | 30.0% | |
| GTATACCATGAAAATGAGTT+AGG | - | chr4.3:41498561-41498580 | None:intergenic | 30.0% | |
| GTTTATTGTGATTTATCCTG+TGG | + | chr4.3:41498869-41498888 | MS.gene65296:CDS | 30.0% | |
| TATATCTCTACTCTAACAAC+TGG | + | chr4.3:41497891-41497910 | MS.gene65296:intron | 30.0% | |
| TCTCAAATTATTAACGGTGT+CGG | - | chr4.3:41498453-41498472 | None:intergenic | 30.0% | |
| TTAGGTACTCATATTCATCA+AGG | + | chr4.3:41498137-41498156 | MS.gene65296:intron | 30.0% | |
| TTCTATATTCTCCATACTGA+TGG | + | chr4.3:41498759-41498778 | MS.gene65296:intron | 30.0% | |
| ! | ACCTGACATTCTCTAAAAAA+AGG | - | chr4.3:41498335-41498354 | None:intergenic | 30.0% |
| ! | ATCCTACCAGATAAGTATTT+TGG | - | chr4.3:41497584-41497603 | None:intergenic | 30.0% |
| ! | ATTCTCTAAAAAAAGGGGAA+GGG | - | chr4.3:41498328-41498347 | None:intergenic | 30.0% |
| ! | CCTGACATTCTCTAAAAAAA+GGG | - | chr4.3:41498334-41498353 | None:intergenic | 30.0% |
| ! | CTGACATTCTCTAAAAAAAG+GGG | - | chr4.3:41498333-41498352 | None:intergenic | 30.0% |
| ! | GATGATTTTGCTTCAATCTT+TGG | + | chr4.3:41498641-41498660 | MS.gene65296:intron | 30.0% |
| !! | TACTTTTTATTCGATCGAAC+TGG | + | chr4.3:41497766-41497785 | MS.gene65296:intron | 30.0% |
| !! | TTTTTATCACTTTTCTTGCG+TGG | + | chr4.3:41497721-41497740 | MS.gene65296:CDS | 30.0% |
| AGAAAAGTGATAAAAACGGG+AGG | - | chr4.3:41497717-41497736 | None:intergenic | 35.0% | |
| CATGAAATGAATTTCAGGAC+TGG | + | chr4.3:41497366-41497385 | MS.gene65296:intron | 35.0% | |
| CATTATGCTTTCAGTTGCTT+GGG | + | chr4.3:41498687-41498706 | MS.gene65296:CDS | 35.0% | |
| GCATTCTTGGAAGTTATACA+CGG | + | chr4.3:41497252-41497271 | MS.gene65296:CDS | 35.0% | |
| TGCTTATACCCTATGAAACA+CGG | + | chr4.3:41498399-41498418 | MS.gene65296:intron | 35.0% | |
| TTAAACAGAAAGCAAGGTCA+AGG | - | chr4.3:41498063-41498082 | None:intergenic | 35.0% | |
| TTAGTCGATACAATGCAGTA+TGG | + | chr4.3:41499037-41499056 | MS.gene65296:intron | 35.0% | |
| ! | CATTCTCTAAAAAAAGGGGA+AGG | - | chr4.3:41498329-41498348 | None:intergenic | 35.0% |
| ! | TGATAAGCATTGTTGGTGTT+AGG | + | chr4.3:41498119-41498138 | MS.gene65296:intron | 35.0% |
| ! | TTCTCTAAAAAAAGGGGAAG+GGG | - | chr4.3:41498327-41498346 | None:intergenic | 35.0% |
| ! | TTGATGCATCTTGATGACAT+AGG | + | chr4.3:41497488-41497507 | MS.gene65296:intron | 35.0% |
| !!! | CCCTTTTTTTAGAGAATGTC+AGG | + | chr4.3:41498331-41498350 | MS.gene65296:intron | 35.0% |
| ACCTCATTTCTCCATCAGTA+TGG | - | chr4.3:41498773-41498792 | None:intergenic | 40.0% | |
| ACTAAATGGGAGGCTTGAAA+AGG | - | chr4.3:41499115-41499134 | None:intergenic | 40.0% | |
| CATATGAACTCACTTTCTCC+AGG | - | chr4.3:41498903-41498922 | None:intergenic | 40.0% | |
| CTGATATAGGTCATCCAAGA+AGG | - | chr4.3:41498720-41498739 | None:intergenic | 40.0% | |
| CTTCTTGGATGACCTATATC+AGG | + | chr4.3:41498718-41498737 | MS.gene65296:CDS | 40.0% | |
| GAAACACCTGAGTTAGAGAT+GGG | - | chr4.3:41497664-41497683 | None:intergenic | 40.0% | |
| GACAGTGTAAAACCTACCAA+TGG | - | chr4.3:41497280-41497299 | None:intergenic | 40.0% | |
| GAGATGGGATCGAATTACAT+CGG | - | chr4.3:41497649-41497668 | None:intergenic | 40.0% | |
| GCATTATGCTTTCAGTTGCT+TGG | + | chr4.3:41498686-41498705 | MS.gene65296:CDS | 40.0% | |
| GGAATACAAACGATTGATCG+TGG | - | chr4.3:41497978-41497997 | None:intergenic | 40.0% | |
| GTTCGTATCCGTGTTTCATA+GGG | - | chr4.3:41498410-41498429 | None:intergenic | 40.0% | |
| GTTGCTTCCTTTGATGCAAT+GGG | + | chr4.3:41497402-41497421 | MS.gene65296:CDS | 40.0% | |
| TCCATACTGATGGAGAAATG+AGG | + | chr4.3:41498769-41498788 | MS.gene65296:intron | 40.0% | |
| TCTTCAATGTGCTGCATTCT+TGG | + | chr4.3:41497239-41497258 | MS.gene65296:CDS | 40.0% | |
| TGTTCGTATCCGTGTTTCAT+AGG | - | chr4.3:41498411-41498430 | None:intergenic | 40.0% | |
| TTGCTTCCTTTGATGCAATG+GGG | + | chr4.3:41497403-41497422 | MS.gene65296:CDS | 40.0% | |
| AAAAGGGGAAGGGGTTGTAA+AGG | - | chr4.3:41498318-41498337 | None:intergenic | 45.0% | |
| AATGAAGCACGGACACTTCT+TGG | - | chr4.3:41498534-41498553 | None:intergenic | 45.0% | |
| ACTTTGTCCTTGCCATTGTC+AGG | + | chr4.3:41497437-41497456 | MS.gene65296:CDS | 45.0% | |
| ATGGGATCGAATTACATCGG+AGG | - | chr4.3:41497646-41497665 | None:intergenic | 45.0% | |
| CACTATATTGTCCGAGACGT+AGG | + | chr4.3:41497936-41497955 | MS.gene65296:intron | 45.0% | |
| CATTGTCAGGGGAATTCATG+AGG | + | chr4.3:41497450-41497469 | MS.gene65296:CDS | 45.0% | |
| CCAGGCGCTTCCAATTATAA+AGG | + | chr4.3:41499068-41499087 | MS.gene65296:CDS | 45.0% | |
| CGAAACACCTGAGTTAGAGA+TGG | - | chr4.3:41497665-41497684 | None:intergenic | 45.0% | |
| CGTTGCTTCCTTTGATGCAA+TGG | + | chr4.3:41497401-41497420 | MS.gene65296:CDS | 45.0% | |
| CTCATGAATTCCCCTGACAA+TGG | - | chr4.3:41497452-41497471 | None:intergenic | 45.0% | |
| CTTTGTCCTTGCCATTGTCA+GGG | + | chr4.3:41497438-41497457 | MS.gene65296:CDS | 45.0% | |
| GCTTGGGAAATTGTCCTTCT+TGG | + | chr4.3:41498703-41498722 | MS.gene65296:CDS | 45.0% | |
| TAAAAACGGGAGGTAACTCC+TGG | - | chr4.3:41497707-41497726 | None:intergenic | 45.0% | |
| TTCGATCCCATCTCTAACTC+AGG | + | chr4.3:41497655-41497674 | MS.gene65296:intron | 45.0% | |
| TTTCGTTGTGTGCTTTCTCC+AGG | + | chr4.3:41497680-41497699 | MS.gene65296:intron | 45.0% | |
| TTTGTCCTTGCCATTGTCAG+GGG | + | chr4.3:41497439-41497458 | MS.gene65296:CDS | 45.0% | |
| ! | ACTTTTCTTGCGTGGAGCAT+AGG | + | chr4.3:41497729-41497748 | MS.gene65296:CDS | 45.0% |
| ! | TGCAGTATGGTTGATGTACC+AGG | + | chr4.3:41499050-41499069 | MS.gene65296:intron | 45.0% |
| ! | TTCTTGGATTAGGTGTGTCC+TGG | - | chr4.3:41498518-41498537 | None:intergenic | 45.0% |
| !! | CCTTTATAATTGGAAGCGCC+TGG | - | chr4.3:41499071-41499090 | None:intergenic | 45.0% |
| !! | GAAGTTATACACGGTGCCAT+TGG | + | chr4.3:41497261-41497280 | MS.gene65296:CDS | 45.0% |
| !! | TTATACACGGTGCCATTGGT+AGG | + | chr4.3:41497265-41497284 | MS.gene65296:intron | 45.0% |
| ACACGGATACGAACACGACA+TGG | + | chr4.3:41498416-41498435 | MS.gene65296:intron | 50.0% | |
| CTTCCTCCCCATTGCATCAA+AGG | - | chr4.3:41497412-41497431 | None:intergenic | 50.0% | |
| CTTCCTTTGATGCAATGGGG+AGG | + | chr4.3:41497406-41497425 | MS.gene65296:CDS | 50.0% | |
| CTTTGATGCAATGGGGAGGA+AGG | + | chr4.3:41497410-41497429 | MS.gene65296:CDS | 50.0% | |
| GAATTCCCCTGACAATGGCA+AGG | - | chr4.3:41497447-41497466 | None:intergenic | 50.0% | |
| GACCAATTGTGCCTACGTCT+CGG | - | chr4.3:41497950-41497969 | None:intergenic | 50.0% | |
| GATTAGGTGTGTCCTGGTGT+CGG | - | chr4.3:41498512-41498531 | None:intergenic | 50.0% | |
| GCACGGACACTTCTTGGATT+AGG | - | chr4.3:41498528-41498547 | None:intergenic | 50.0% | |
| TATGTGACATGTCCGACACC+AGG | + | chr4.3:41498497-41498516 | MS.gene65296:intron | 50.0% | |
| !! | ATTTCAGGACTGGTTCCGAG+CGG | + | chr4.3:41497376-41497395 | MS.gene65296:intron | 50.0% |
| !! | TATCCTGTGGGAGTGTTTCC+TGG | + | chr4.3:41498882-41498901 | MS.gene65296:CDS | 50.0% |
| AAAGGAAGCAACGCTCCGCT+CGG | - | chr4.3:41497394-41497413 | None:intergenic | 55.0% | |
| GTCCGAGACGTAGGCACAAT+TGG | + | chr4.3:41497945-41497964 | MS.gene65296:intron | 55.0% | |
| TCTCCAGGAAACACTCCCAC+AGG | - | chr4.3:41498888-41498907 | None:intergenic | 55.0% | |
| TGTGTGCTTTCTCCAGGTCC+AGG | + | chr4.3:41497686-41497705 | MS.gene65296:intron | 55.0% | |
| TCTTGCGTGGAGCATAGGCG+AGG | + | chr4.3:41497734-41497753 | MS.gene65296:CDS | 60.0% | |
| CGGGAGGTAACTCCTGGACC+TGG | - | chr4.3:41497701-41497720 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 41497235 | 41499152 | 41497235 | ID=MS.gene65296 |
| chr4.3 | mRNA | 41497235 | 41499152 | 41497235 | ID=MS.gene65296.t1;Parent=MS.gene65296 |
| chr4.3 | exon | 41497235 | 41497282 | 41497235 | ID=MS.gene65296.t1.exon1;Parent=MS.gene65296.t1 |
| chr4.3 | CDS | 41497235 | 41497282 | 41497235 | ID=cds.MS.gene65296.t1;Parent=MS.gene65296.t1 |
| chr4.3 | exon | 41497383 | 41497471 | 41497383 | ID=MS.gene65296.t1.exon2;Parent=MS.gene65296.t1 |
| chr4.3 | CDS | 41497383 | 41497471 | 41497383 | ID=cds.MS.gene65296.t1;Parent=MS.gene65296.t1 |
| chr4.3 | exon | 41497702 | 41497755 | 41497702 | ID=MS.gene65296.t1.exon3;Parent=MS.gene65296.t1 |
| chr4.3 | CDS | 41497702 | 41497755 | 41497702 | ID=cds.MS.gene65296.t1;Parent=MS.gene65296.t1 |
| chr4.3 | exon | 41498672 | 41498739 | 41498672 | ID=MS.gene65296.t1.exon4;Parent=MS.gene65296.t1 |
| chr4.3 | CDS | 41498672 | 41498739 | 41498672 | ID=cds.MS.gene65296.t1;Parent=MS.gene65296.t1 |
| chr4.3 | exon | 41498860 | 41498909 | 41498860 | ID=MS.gene65296.t1.exon5;Parent=MS.gene65296.t1 |
| chr4.3 | CDS | 41498860 | 41498909 | 41498860 | ID=cds.MS.gene65296.t1;Parent=MS.gene65296.t1 |
| chr4.3 | exon | 41499055 | 41499152 | 41499055 | ID=MS.gene65296.t1.exon6;Parent=MS.gene65296.t1 |
| chr4.3 | CDS | 41499055 | 41499152 | 41499055 | ID=cds.MS.gene65296.t1;Parent=MS.gene65296.t1 |
| Gene Sequence |
| Protein sequence |
