AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053203


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053203.t1 MTR_4g007190 96.597 382 10 1 1 382 1 379 0.0 753
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053203.t1 AT1G73060 72.487 378 82 3 5 381 1 357 0.0 532

Find 81 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAACAGATACACCTGATTT+AGG 0.217240 4.2:+92475762 None:intergenic
CAGCAACATTTCTTCATATA+AGG 0.266428 4.2:-92474409 MS.gene053203:intron
GACCCTCAACAGTTCTTCTT+TGG 0.277713 4.2:+92470723 None:intergenic
TGAATTCGCAGTGCTGATTT+AGG 0.279676 4.2:-92471900 MS.gene053203:intron
AGTGCTGATTTAGGCCTTCT+AGG 0.283454 4.2:-92471891 MS.gene053203:CDS
AATAAAAGTGTTGGGGTTGA+TGG 0.284314 4.2:+92472041 None:intergenic
CCACTGTAATTGACAATATA+AGG 0.298504 4.2:+92471661 None:intergenic
AAAACGGTACTGCAAATCTT+TGG 0.309048 4.2:+92471860 None:intergenic
CAAGATTAAATAAAAGTGTT+GGG 0.358312 4.2:+92472033 None:intergenic
AATTTCTACGAAGAGGCTAT+AGG 0.362385 4.2:-92470666 MS.gene053203:CDS
CTTTGGGTGGGAAGCCTAGA+AGG 0.376335 4.2:+92471877 None:intergenic
GTGGGAAGAAGATTCTGATT+TGG 0.401550 4.2:-92470224 MS.gene053203:CDS
TTAGGATCGAAACCACGATT+TGG 0.404526 4.2:+92475780 None:intergenic
ATTTCTACGAAGAGGCTATA+GGG 0.409617 4.2:-92470665 MS.gene053203:intron
AAGGTTGATGGCCTTACTAT+AGG 0.409941 4.2:-92473496 MS.gene053203:CDS
GAAGAACTGTTGAGGGTCCT+TGG 0.419306 4.2:-92470718 MS.gene053203:CDS
TTACTCCAGTGTTCTACATT+CGG 0.425820 4.2:-92471827 MS.gene053203:CDS
TCCTGCAGGGATATCATCTA+AGG 0.428313 4.2:+92473471 None:intergenic
CTTATATGAAGAAATGTTGC+TGG 0.430887 4.2:+92474410 None:intergenic
AAACGGTACTGCAAATCTTT+GGG 0.431403 4.2:+92471861 None:intergenic
CCTCTTCTTCTTGAAGTCCA+AGG 0.433964 4.2:+92470701 None:intergenic
CGTGGTTTCGATCCTAAATC+AGG 0.444850 4.2:-92475774 MS.gene053203:CDS
TGCCAACATTCAACTTGTCT+TGG 0.448124 4.2:-92473922 MS.gene053203:CDS
TTGCTTAAGCATCACCTGCC+AGG 0.449595 4.2:+92470887 None:intergenic
GCGAGAACTTCATAAGACTT+AGG 0.454079 4.2:+92475735 None:intergenic
TCAGTTGTTCAAAGCAGCTC+TGG 0.458399 4.2:-92473705 MS.gene053203:CDS
CATCTTCAAAGTCAAAATCA+AGG 0.471831 4.2:+92473413 None:intergenic
AATGAAGCCACAGGTCCTGC+AGG 0.472666 4.2:+92473457 None:intergenic
TCAAGATTAAATAAAAGTGT+TGG 0.473701 4.2:+92472032 None:intergenic
TTAGTAGTAGAAATTGAAGA+AGG 0.484021 4.2:+92475873 None:intergenic
GACTTTGAAGATGAGAATGA+AGG 0.486387 4.2:-92473403 MS.gene053203:intron
AATAGCAGTACACGTGAACT+TGG 0.489119 4.2:-92473154 MS.gene053203:CDS
ATATAGCTGTACCAGGGTAC+TGG 0.490688 4.2:+92471626 None:intergenic
TGAAGAAATGTTGCTGGGCA+AGG 0.493271 4.2:+92474416 None:intergenic
TCATAAATCATTCAGGTCCC+TGG 0.502231 4.2:-92470905 MS.gene053203:intron
TTCTTAGAAGTGCAGGTCGT+TGG 0.503758 4.2:-92473213 MS.gene053203:intron
GAAGAAGGTGAAGAAGATAG+TGG 0.505084 4.2:+92475888 None:intergenic
AGTGCAACTCGCTTCACCCT+TGG 0.516086 4.2:-92470834 MS.gene053203:CDS
TCCTTAGATGATATCCCTGC+AGG 0.518676 4.2:-92473472 MS.gene053203:CDS
GGCCAAAGAAGAACTGTTGA+GGG 0.520188 4.2:-92470725 MS.gene053203:CDS
GAGTAAATTGAGAAAGAAAA+CGG 0.526529 4.2:+92471844 None:intergenic
GATAGTGGAGAAAGATGTGA+AGG 0.532078 4.2:+92475903 None:intergenic
CATCTAAGGAGCCTATAGTA+AGG 0.549669 4.2:+92473485 None:intergenic
CAACACAATGCTACTATCCA+TGG 0.551674 4.2:-92475967 None:intergenic
AAATCATTCAGGTCCCTGGC+AGG 0.556462 4.2:-92470901 MS.gene053203:intron
TGCTTAAGCATCACCTGCCA+GGG 0.558854 4.2:+92470888 None:intergenic
GAAGAAATGTTGCTGGGCAA+GGG 0.561828 4.2:+92474417 None:intergenic
TGGTTATATTGAGAAGTATG+TGG 0.564545 4.2:-92473134 MS.gene053203:intron
CGGTACTGCAAATCTTTGGG+TGG 0.567822 4.2:+92471864 None:intergenic
AGCCAAGACAAGTTGAATGT+TGG 0.570943 4.2:+92473920 None:intergenic
TTATATGAAGAAATGTTGCT+GGG 0.572669 4.2:+92474411 None:intergenic
AAGATTAAATAAAAGTGTTG+GGG 0.574401 4.2:+92472034 None:intergenic
GCTGTGTTTCGCCAGTACCC+TGG 0.579836 4.2:-92471637 MS.gene053203:intron
TTAATGAATATGTAGAGCGA+TGG 0.581715 4.2:+92473175 None:intergenic
CCTTGGACTTCAAGAAGAAG+AGG 0.584366 4.2:-92470701 MS.gene053203:CDS
ATGAATATGTAGAGCGATGG+AGG 0.586924 4.2:+92473178 None:intergenic
TCTCTAGAATTTCTACGAAG+AGG 0.589731 4.2:-92470673 MS.gene053203:CDS
ATTGCAGTCAAGCACGTGGT+GGG 0.590052 4.2:-92470242 MS.gene053203:intron
CTGATCCGAATGTAGAACAC+TGG 0.590070 4.2:+92471822 None:intergenic
AATGCTACTATCCATGGCTA+TGG 0.594263 4.2:-92475961 MS.gene053203:CDS
AGGCCAAAGAAGAACTGTTG+AGG 0.601043 4.2:-92470726 MS.gene053203:CDS
ATCTTCAAAGTCAAAATCAA+GGG 0.605002 4.2:+92473414 None:intergenic
CCTTATATTGTCAATTACAG+TGG 0.607987 4.2:-92471661 MS.gene053203:CDS
TGATATCCCTGCAGGACCTG+TGG 0.610302 4.2:-92473464 MS.gene053203:CDS
ATCTTGAGCTAGATACACTA+CGG 0.610940 4.2:-92472016 MS.gene053203:intron
AGATGACATAGCCATAGCCA+TGG 0.621508 4.2:+92475950 None:intergenic
TCATGAACTTACTTCACCAA+GGG 0.622484 4.2:+92470818 None:intergenic
GGTACTGCAAATCTTTGGGT+GGG 0.629140 4.2:+92471865 None:intergenic
ATGAAGCCACAGGTCCTGCA+GGG 0.630187 4.2:+92473458 None:intergenic
ATTTGGAAGTATCATCTGCA+TGG 0.634373 4.2:-92470207 MS.gene053203:CDS
TCTTCATCAGAGCCAAATCG+TGG 0.636063 4.2:-92475792 MS.gene053203:CDS
TACACAAGCATAAGAACCAT+CGG 0.638469 4.2:+92470863 None:intergenic
TATTGCAGTCAAGCACGTGG+TGG 0.640120 4.2:-92470243 MS.gene053203:intron
TTCATGAACTTACTTCACCA+AGG 0.640836 4.2:+92470817 None:intergenic
GTGATGCTTAAGCAAACCGA+TGG 0.643172 4.2:-92470879 MS.gene053203:CDS
CTTGGACTTCAAGAAGAAGA+GGG 0.644314 4.2:-92470700 MS.gene053203:CDS
TCGGATCAGAGATTATTCAA+AGG 0.660666 4.2:-92471808 MS.gene053203:intron
GGAAGAAAAGTGATGTTGTG+AGG 0.687260 4.2:+92475924 None:intergenic
AGCTGCTTTGAACAACTGAG+AGG 0.692149 4.2:+92473709 None:intergenic
TGGAAGTATCATCTGCATGG+CGG 0.725682 4.2:-92470204 MS.gene053203:CDS
TGATATTGCAGTCAAGCACG+TGG 0.735833 4.2:-92470246 MS.gene053203:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATTTATGAAAAAAATTT+AGG + chr4.2:92475244-92475263 None:intergenic 10.0%
!! TATTATTCAATATTTATCTA+TGG - chr4.2:92471548-92471567 MS.gene053203:intron 10.0%
!! TGATTTATGAAAAAAATTTA+GGG + chr4.2:92475243-92475262 None:intergenic 10.0%
!!! ATTTTAACAAATTTTCATTA+TGG - chr4.2:92471970-92471989 MS.gene053203:intron 10.0%
!! ATACATCAAATTAAATAACT+AGG + chr4.2:92474058-92474077 None:intergenic 15.0%
!! GAATTAAAATATTGATCAAT+TGG + chr4.2:92471080-92471099 None:intergenic 15.0%
!! TAATTTATCCTACTAATATT+TGG + chr4.2:92471900-92471919 None:intergenic 15.0%
!!! AATTTGAAACTATATTTGTA+GGG - chr4.2:92471001-92471020 MS.gene053203:intron 15.0%
!!! ATATTTTCTCAAATAATATG+AGG - chr4.2:92474431-92474450 MS.gene053203:intron 15.0%
!!! ATTTTTTTCATAAATCATTC+AGG - chr4.2:92475246-92475265 MS.gene053203:intron 15.0%
!!! CTTGTATAAATATTTTAAGA+AGG + chr4.2:92475792-92475811 None:intergenic 15.0%
!!! TATAAATATTTTAAGAAGGT+TGG + chr4.2:92475788-92475807 None:intergenic 15.0%
!! AGAAAAAATGTTGAAAATGT+AGG + chr4.2:92471592-92471611 None:intergenic 20.0%
!! ATAAAAAAAAACTAGCTATC+TGG + chr4.2:92475171-92475190 None:intergenic 20.0%
!! ATACCTTATCTAATATCTAT+TGG - chr4.2:92475402-92475421 MS.gene053203:intron 20.0%
!! ATAGGATCATAAATCATATT+TGG - chr4.2:92475847-92475866 MS.gene053203:CDS 20.0%
!! CAAATTCCTAAATATTTCAA+GGG - chr4.2:92472192-92472211 MS.gene053203:intron 20.0%
!! CAAATTGTCAATAAGAAAAA+GGG - chr4.2:92475083-92475102 MS.gene053203:intron 20.0%
!! CAGATAATGATAAATATCTA+GGG + chr4.2:92474399-92474418 None:intergenic 20.0%
!! GTAATTAAAAGGAGATTATT+TGG - chr4.2:92471407-92471426 MS.gene053203:intron 20.0%
!! TAAATAGTAAAACTTGATGT+AGG - chr4.2:92473604-92473623 MS.gene053203:intron 20.0%
!! TAATGAACTGTTTAAAAGAA+CGG - chr4.2:92473837-92473856 MS.gene053203:intron 20.0%
!! TATGATATCTTCATTCTTTA+TGG + chr4.2:92472593-92472612 None:intergenic 20.0%
!! TCAAATTCCTAAATATTTCA+AGG - chr4.2:92472191-92472210 MS.gene053203:intron 20.0%
!! TCAAATTGTCAATAAGAAAA+AGG - chr4.2:92475082-92475101 MS.gene053203:intron 20.0%
!! TCAGATAATGATAAATATCT+AGG + chr4.2:92474400-92474419 None:intergenic 20.0%
!! TCTTGATATTGTGAAATTTA+TGG - chr4.2:92470907-92470926 MS.gene053203:intron 20.0%
!! TTATCATGTAATATGCAATA+AGG + chr4.2:92475015-92475034 None:intergenic 20.0%
!! TTCAATATTTATCTATGGAA+AGG - chr4.2:92471553-92471572 MS.gene053203:intron 20.0%
!! TTCATTTGATGTAATGAATT+TGG - chr4.2:92475118-92475137 MS.gene053203:intron 20.0%
!! TTGTGAAATTTATGGATAAA+TGG - chr4.2:92470915-92470934 MS.gene053203:intron 20.0%
!!! AAATTTAAAATCGGAAATGT+TGG - chr4.2:92471133-92471152 MS.gene053203:intron 20.0%
!!! AAATTTTTCTTGAGTCATAT+TGG - chr4.2:92472864-92472883 MS.gene053203:intron 20.0%
!!! AAGATTAAATAAAAGTGTTG+GGG + chr4.2:92474127-92474146 None:intergenic 20.0%
!!! AATTTAAAATCGGAAATGTT+GGG - chr4.2:92471134-92471153 MS.gene053203:intron 20.0%
!!! ATGTGTAAATTTTACATAAG+AGG + chr4.2:92475611-92475630 None:intergenic 20.0%
!!! ATTCTGGAATTAGAAATATA+GGG + chr4.2:92473446-92473465 None:intergenic 20.0%
!!! ATTGTCAAATAAAAGCATAT+TGG + chr4.2:92475207-92475226 None:intergenic 20.0%
!!! CAAGATTAAATAAAAGTGTT+GGG + chr4.2:92474128-92474147 None:intergenic 20.0%
!!! CAATTTGAAACTATATTTGT+AGG - chr4.2:92471000-92471019 MS.gene053203:intron 20.0%
!!! GAATATTCTTATTTACTATG+AGG - chr4.2:92472500-92472519 MS.gene053203:intron 20.0%
!!! GTTCTTTCATTTGTTTTTTT+TGG - chr4.2:92473221-92473240 MS.gene053203:intron 20.0%
!!! TAATAACAATATTTTGCTTG+CGG - chr4.2:92471659-92471678 MS.gene053203:CDS 20.0%
!!! TCAAGATTAAATAAAAGTGT+TGG + chr4.2:92474129-92474148 None:intergenic 20.0%
!!! TCAAGTTTTACTATTTAATG+CGG + chr4.2:92473601-92473620 None:intergenic 20.0%
!!! TGAAAATTTGTTAAAATCCA+TGG + chr4.2:92471967-92471986 None:intergenic 20.0%
!!! TGAATTATTTGTTTCAGTTT+TGG - chr4.2:92471814-92471833 MS.gene053203:CDS 20.0%
!!! TTCATCTTTATTTTGTTTCA+AGG - chr4.2:92472643-92472662 MS.gene053203:intron 20.0%
!!! TTCATGATTTTTTATCTGTT+CGG - chr4.2:92473072-92473091 MS.gene053203:intron 20.0%
!!! TTGCTATTTTCTCAAATTTT+CGG + chr4.2:92470765-92470784 None:intergenic 20.0%
!!! TTGTACTCTTTTTTGTTTAT+TGG - chr4.2:92474171-92474190 MS.gene053203:intron 20.0%
! AAAATCATGAAACCTTCTAA+TGG + chr4.2:92473063-92473082 None:intergenic 25.0%
! AACCCACTATAATGAAAATT+TGG + chr4.2:92475824-92475843 None:intergenic 25.0%
! AACTATATTTGTAGGGAATT+TGG - chr4.2:92471008-92471027 MS.gene053203:intron 25.0%
! AAGCCAATAGATATTAGATA+AGG + chr4.2:92475408-92475427 None:intergenic 25.0%
! AATGAGAAATAGAGGAAATA+TGG + chr4.2:92474921-92474940 None:intergenic 25.0%
! AGTTAATATTAGATAACTGG+TGG + chr4.2:92474749-92474768 None:intergenic 25.0%
! ATAAATATATAGCTGTACCA+GGG + chr4.2:92474541-92474560 None:intergenic 25.0%
! ATCATGTATCACAGATTATT+AGG + chr4.2:92474623-92474642 None:intergenic 25.0%
! ATCTTCAAAGTCAAAATCAA+GGG + chr4.2:92472747-92472766 None:intergenic 25.0%
! ATGTAATATGCAATAAGGTA+AGG + chr4.2:92475010-92475029 None:intergenic 25.0%
! CACAAAGAATTATCAAAATC+TGG - chr4.2:92474975-92474994 MS.gene053203:intron 25.0%
! GAAATGTGAGTTTCTTAATA+TGG - chr4.2:92473980-92473999 MS.gene053203:intron 25.0%
! GAGTAAATTGAGAAAGAAAA+CGG + chr4.2:92474317-92474336 None:intergenic 25.0%
! GCATATTACATGATAACTAA+TGG - chr4.2:92475019-92475038 MS.gene053203:intron 25.0%
! TAGTATGATTATATTCCCTT+GGG + chr4.2:92473370-92473389 None:intergenic 25.0%
! TATAAATATATAGCTGTACC+AGG + chr4.2:92474542-92474561 None:intergenic 25.0%
! TATTCATTAATTGACTGATG+TGG + chr4.2:92470684-92470703 None:intergenic 25.0%
! TCACAGTTAGTAAGAAAATA+AGG + chr4.2:92475372-92475391 None:intergenic 25.0%
! TCAGTATATGTAACAACAAT+AGG - chr4.2:92474791-92474810 MS.gene053203:intron 25.0%
! TGGAGTTAATATTAGATAAC+TGG + chr4.2:92474752-92474771 None:intergenic 25.0%
! TGTATTGCAAATTACTTGTT+TGG - chr4.2:92471310-92471329 MS.gene053203:intron 25.0%
! TTAAAATCCATGGTAAACAA+AGG + chr4.2:92471957-92471976 None:intergenic 25.0%
! TTAGTAGTAGAAATTGAAGA+AGG + chr4.2:92470288-92470307 None:intergenic 25.0%
! TTAGTATGATTATATTCCCT+TGG + chr4.2:92473371-92473390 None:intergenic 25.0%
! TTATATGAAGAAATGTTGCT+GGG + chr4.2:92471750-92471769 None:intergenic 25.0%
! TTATTTCAACCATAGCAAAA+AGG + chr4.2:92475568-92475587 None:intergenic 25.0%
! TTGATTAAGATGTAATGGTT+CGG - chr4.2:92473767-92473786 MS.gene053203:intron 25.0%
! TTTGGTTGAGAGATAATATT+TGG - chr4.2:92471425-92471444 MS.gene053203:intron 25.0%
!! AATTTGTTCAAAAAGGGTTT+GGG - chr4.2:92473744-92473763 MS.gene053203:intron 25.0%
!! AGCCAAATTTTCATTATAGT+GGG - chr4.2:92475819-92475838 MS.gene053203:CDS 25.0%
!! ATAGGGATTATTCTTTCTTT+TGG + chr4.2:92473505-92473524 None:intergenic 25.0%
!! ATATTTTGCTAATCAGAAGT+AGG + chr4.2:92472021-92472040 None:intergenic 25.0%
!! ATTAAATTTCTTAGAAGTGC+AGG - chr4.2:92472938-92472957 MS.gene053203:intron 25.0%
!! TGGTTCAATTTGTTCAAAAA+GGG - chr4.2:92473738-92473757 MS.gene053203:CDS 25.0%
!! TGTATATAGGTCTATGTTTT+TGG - chr4.2:92471845-92471864 MS.gene053203:CDS 25.0%
!! TTATATTGTGCTATTGGTAA+TGG + chr4.2:92473481-92473500 None:intergenic 25.0%
!! TTCTATTACTACTATTTTGC+AGG - chr4.2:92474083-92474102 MS.gene053203:intron 25.0%
!! TTGGTTCAATTTGTTCAAAA+AGG - chr4.2:92473737-92473756 MS.gene053203:CDS 25.0%
!! TTTGGTTTATATTGTGCTAT+TGG + chr4.2:92473487-92473506 None:intergenic 25.0%
!!! AAGTATTTGTTGCTTTGAAA+GGG + chr4.2:92472334-92472353 None:intergenic 25.0%
!!! AATTTTAGTTTGGTTCAGTT+CGG - chr4.2:92473892-92473911 MS.gene053203:CDS 25.0%
!!! CATTCTGGAATTAGAAATAT+AGG + chr4.2:92473447-92473466 None:intergenic 25.0%
!!! TAGTTGCTTTGCTATTATTA+TGG - chr4.2:92471238-92471257 MS.gene053203:intron 25.0%
!!! TCATTATAGTGGGTTATTAT+AGG - chr4.2:92475829-92475848 MS.gene053203:CDS 25.0%
!!! TTATTTTGTTTCAAGGTTGA+TGG - chr4.2:92472650-92472669 MS.gene053203:intron 25.0%
!!! TTCTGGAATTAGAAATATAG+GGG + chr4.2:92473445-92473464 None:intergenic 25.0%
AACAAAGGCTATCAAAAGTA+GGG + chr4.2:92473957-92473976 None:intergenic 30.0%
AAGAGGAAAAATGCACATTA+GGG + chr4.2:92475682-92475701 None:intergenic 30.0%
AATCATACTAAGAACACTTG+AGG - chr4.2:92473380-92473399 MS.gene053203:intron 30.0%
AATTAACCGAACCATTACAT+TGG + chr4.2:92473876-92473895 None:intergenic 30.0%
AATTTATACTGTCAAACCCA+AGG - chr4.2:92473351-92473370 MS.gene053203:intron 30.0%
ACGAAGTTCCAAATATTAGT+AGG - chr4.2:92471889-92471908 MS.gene053203:CDS 30.0%
ATGAAACTTCAGAATATGAC+AGG + chr4.2:92472628-92472647 None:intergenic 30.0%
ATTGTCAATAAGAAAAAGGG+AGG - chr4.2:92475086-92475105 MS.gene053203:intron 30.0%
ATTTATACTGTCAAACCCAA+GGG - chr4.2:92473352-92473371 MS.gene053203:intron 30.0%
CAAAATGTAGACAATCGAAA+GGG - chr4.2:92471475-92471494 MS.gene053203:intron 30.0%
CAATAACCAATGTAATGGTT+CGG - chr4.2:92473867-92473886 MS.gene053203:intron 30.0%
CAGCAACATTTCTTCATATA+AGG - chr4.2:92471749-92471768 MS.gene053203:intron 30.0%
CAGTTCAATAACCAATGTAA+TGG - chr4.2:92473862-92473881 MS.gene053203:intron 30.0%
CATAGACCTATATACAATGA+AGG + chr4.2:92471841-92471860 None:intergenic 30.0%
CATCTTCAAAGTCAAAATCA+AGG + chr4.2:92472748-92472767 None:intergenic 30.0%
CATTCTTATCTGTATTAGCT+TGG - chr4.2:92473125-92473144 MS.gene053203:intron 30.0%
CTAAAGTCACCAAATATCAA+CGG + chr4.2:92471367-92471386 None:intergenic 30.0%
CTGTCAAAATCTTTATGTTG+CGG - chr4.2:92470958-92470977 MS.gene053203:intron 30.0%
CTTATATGAAGAAATGTTGC+TGG + chr4.2:92471751-92471770 None:intergenic 30.0%
GAAGATCCCTTGAAATATTT+AGG + chr4.2:92472201-92472220 None:intergenic 30.0%
GAGAAGTTGTGTTAAAAGAA+AGG - chr4.2:92474699-92474718 MS.gene053203:intron 30.0%
GAGTGTAAGTAGTTTATGTT+TGG - chr4.2:92470564-92470583 MS.gene053203:intron 30.0%
GCACATTAGGGAATATAATT+GGG + chr4.2:92475670-92475689 None:intergenic 30.0%
GGGACATAATGGTAATTAAA+AGG - chr4.2:92471396-92471415 MS.gene053203:intron 30.0%
GTTCTATGTAGTACATATCA+CGG + chr4.2:92470864-92470883 None:intergenic 30.0%
GTTGGTATTTATGCACATTA+GGG + chr4.2:92475770-92475789 None:intergenic 30.0%
TAAACAGATACACCTGATTT+AGG + chr4.2:92470399-92470418 None:intergenic 30.0%
TAACGCATAAGTTTCAAACA+TGG + chr4.2:92472837-92472856 None:intergenic 30.0%
TAAGAGGAAAAATGCACATT+AGG + chr4.2:92475683-92475702 None:intergenic 30.0%
TCAGTTAATTGAGTTCAGTT+CGG - chr4.2:92473791-92473810 MS.gene053203:intron 30.0%
TGCACATTAGGGAATATAAT+TGG + chr4.2:92475671-92475690 None:intergenic 30.0%
TGCACATTATTTATCACCAA+TGG + chr4.2:92473187-92473206 None:intergenic 30.0%
TGTAGCTAAGCTAATATGAT+GGG - chr4.2:92472070-92472089 MS.gene053203:intron 30.0%
TTAATGAATATGTAGAGCGA+TGG + chr4.2:92472986-92473005 None:intergenic 30.0%
TTCAGTATAATACAGCTGTA+GGG + chr4.2:92473528-92473547 None:intergenic 30.0%
TTGTAGCTAAGCTAATATGA+TGG - chr4.2:92472069-92472088 MS.gene053203:intron 30.0%
TTTGGTCCTTCATTGTATAT+AGG - chr4.2:92471832-92471851 MS.gene053203:CDS 30.0%
! ATATTGAGAAGTATGTGGTA+TGG - chr4.2:92473029-92473048 MS.gene053203:intron 30.0%
! CAATTTGTTCAAAAAGGGTT+TGG - chr4.2:92473743-92473762 MS.gene053203:CDS 30.0%
! GAGCCAAATTTTCATTATAG+TGG - chr4.2:92475818-92475837 MS.gene053203:CDS 30.0%
! TATTGACTATGTGAAAGCAT+TGG - chr4.2:92471179-92471198 MS.gene053203:intron 30.0%
! TGATGAAGAAGCTTCTTTTT+CGG + chr4.2:92470355-92470374 None:intergenic 30.0%
! TGGTTATATTGAGAAGTATG+TGG - chr4.2:92473024-92473043 MS.gene053203:intron 30.0%
! TTGCTATTATTATGGATGCA+TGG - chr4.2:92471246-92471265 MS.gene053203:intron 30.0%
!! GAAGTATTTGTTGCTTTGAA+AGG + chr4.2:92472335-92472354 None:intergenic 30.0%
!! GTTGGTAACAGATTTAAAAC+TGG + chr4.2:92475886-92475905 None:intergenic 30.0%
!! TAATATCTATTGGCTTGTCT+AGG - chr4.2:92475412-92475431 MS.gene053203:intron 30.0%
!! TAGAACTAGTCTTATCACTA+TGG - chr4.2:92470878-92470897 MS.gene053203:CDS 30.0%
!! TTGGGTTGATTAAGATGTAA+TGG - chr4.2:92473762-92473781 MS.gene053203:intron 30.0%
!!! GACGTTTATTTTTTCTCCAT+TGG - chr4.2:92473168-92473187 MS.gene053203:CDS 30.0%
!!! TAGATTTGGGACTTTTTTGT+AGG - chr4.2:92472396-92472415 MS.gene053203:intron 30.0%
!!! TGGTTCGGTTAATTTTAGTT+TGG - chr4.2:92473882-92473901 MS.gene053203:CDS 30.0%
AAAACGGTACTGCAAATCTT+TGG + chr4.2:92474301-92474320 None:intergenic 35.0%
AAACGGTACTGCAAATCTTT+GGG + chr4.2:92474300-92474319 None:intergenic 35.0%
AACACGTTAATTATGTGCAC+TGG - chr4.2:92474027-92474046 MS.gene053203:intron 35.0%
AACACTTGAGGAACAAAAGA+GGG - chr4.2:92473392-92473411 MS.gene053203:intron 35.0%
AACTCACATTTCACCAACAA+AGG + chr4.2:92473972-92473991 None:intergenic 35.0%
AATGTTGGGTCTTGATTCTA+TGG - chr4.2:92471148-92471167 MS.gene053203:intron 35.0%
AATTTCTACGAAGAGGCTAT+AGG - chr4.2:92475492-92475511 MS.gene053203:intron 35.0%
ACAAAGGCTATCAAAAGTAG+GGG + chr4.2:92473956-92473975 None:intergenic 35.0%
ACTGCAATATCACAAGATGT+TGG + chr4.2:92475904-92475923 None:intergenic 35.0%
AGAATGAGAGTTAAACGTAC+GGG + chr4.2:92470515-92470534 None:intergenic 35.0%
AGGGACTATTCAATAGAGAA+GGG + chr4.2:92474380-92474399 None:intergenic 35.0%
ATAATACAGCTGTAGGGATA+GGG + chr4.2:92473522-92473541 None:intergenic 35.0%
ATCCAAAAACTGAACTGAAC+CGG + chr4.2:92473922-92473941 None:intergenic 35.0%
ATCTTGAGCTAGATACACTA+CGG - chr4.2:92474142-92474161 MS.gene053203:intron 35.0%
ATGCATAAAAGCAACGCAAA+CGG + chr4.2:92475537-92475556 None:intergenic 35.0%
ATTTCTACGAAGAGGCTATA+GGG - chr4.2:92475493-92475512 MS.gene053203:intron 35.0%
CAACAAAGGCTATCAAAAGT+AGG + chr4.2:92473958-92473977 None:intergenic 35.0%
CAAGCTAATGCATGAATACA+AGG + chr4.2:92471054-92471073 None:intergenic 35.0%
CCAAAATGTAGACAATCGAA+AGG - chr4.2:92471474-92471493 MS.gene053203:intron 35.0%
CCTAACACCGTAATTAGTAA+GGG - chr4.2:92474881-92474900 MS.gene053203:intron 35.0%
CCTCTTTCCCTTACTAATTA+CGG + chr4.2:92474891-92474910 None:intergenic 35.0%
CTTCAGTATAATACAGCTGT+AGG + chr4.2:92473529-92473548 None:intergenic 35.0%
CTTGTATTCATGCATTAGCT+TGG - chr4.2:92471052-92471071 MS.gene053203:intron 35.0%
GACAGTATGAAATGAGAAGA+GGG - chr4.2:92473702-92473721 MS.gene053203:CDS 35.0%
GAGAATGAGAGTTAAACGTA+CGG + chr4.2:92470516-92470535 None:intergenic 35.0%
GATTCTCTACCGTTGATATT+TGG - chr4.2:92471355-92471374 MS.gene053203:intron 35.0%
GGAACAAAAAAGATCAGGAA+TGG + chr4.2:92471703-92471722 None:intergenic 35.0%
GTAAAATTTACACATTCCCG+TGG - chr4.2:92475616-92475635 MS.gene053203:intron 35.0%
TACACAAGCATAAGAACCAT+CGG + chr4.2:92475298-92475317 None:intergenic 35.0%
TACTATTTAATGCGGTCACT+GGG + chr4.2:92473593-92473612 None:intergenic 35.0%
TAGGGACTATTCAATAGAGA+AGG + chr4.2:92474381-92474400 None:intergenic 35.0%
TAGTAAGGGAAAGAGGAATA+TGG - chr4.2:92474895-92474914 MS.gene053203:intron 35.0%
TATAATACAGCTGTAGGGAT+AGG + chr4.2:92473523-92473542 None:intergenic 35.0%
TATTAACTCCACATCTTGCA+AGG - chr4.2:92474761-92474780 MS.gene053203:intron 35.0%
TCATGAACTTACTTCACCAA+GGG + chr4.2:92475343-92475362 None:intergenic 35.0%
TCGGATCAGAGATTATTCAA+AGG - chr4.2:92474350-92474369 MS.gene053203:intron 35.0%
TGGTGACTTTAGTGTACTTA+GGG - chr4.2:92471375-92471394 MS.gene053203:intron 35.0%
TGTATCACCTGAAAAAAGCA+AGG - chr4.2:92475051-92475070 MS.gene053203:intron 35.0%
TGTGACTTACTTCAAGTCAA+AGG + chr4.2:92474959-92474978 None:intergenic 35.0%
TTACTATTTAATGCGGTCAC+TGG + chr4.2:92473594-92473613 None:intergenic 35.0%
TTACTCCAGTGTTCTACATT+CGG - chr4.2:92474331-92474350 MS.gene053203:intron 35.0%
TTCATGAACTTACTTCACCA+AGG + chr4.2:92475344-92475363 None:intergenic 35.0%
! AAGAGGGAAAGTTGAGATTT+TGG - chr4.2:92473718-92473737 MS.gene053203:CDS 35.0%
! ATTGACAGTTGACGTTTTTG+AGG - chr4.2:92472133-92472152 MS.gene053203:intron 35.0%
! CCTTACTAATTACGGTGTTA+GGG + chr4.2:92474883-92474902 None:intergenic 35.0%
! CCTTTCGATTGTCTACATTT+TGG + chr4.2:92471477-92471496 None:intergenic 35.0%
! CTCAATTTTGCTCTTCAAGA+TGG - chr4.2:92470465-92470484 MS.gene053203:intron 35.0%
! GACTTTGAAGATGAGAATGA+AGG - chr4.2:92472755-92472774 MS.gene053203:intron 35.0%
! GGTTGGTATTTATGCACATT+AGG + chr4.2:92475771-92475790 None:intergenic 35.0%
! TAAGGTACTATTCTTTGCTC+TGG - chr4.2:92471767-92471786 MS.gene053203:intron 35.0%
! TAGCTTGGTCTTTGATTCTT+TGG - chr4.2:92473140-92473159 MS.gene053203:CDS 35.0%
! TGCTTACATACTTCCCTTTT+TGG - chr4.2:92474834-92474853 MS.gene053203:intron 35.0%
! TTAAAACTGGACTAGAGACA+TGG + chr4.2:92475873-92475892 None:intergenic 35.0%
! TTGGTCTTTGATTCTTTGGT+AGG - chr4.2:92473144-92473163 MS.gene053203:CDS 35.0%
! TTGGTGACTTTAGTGTACTT+AGG - chr4.2:92471374-92471393 MS.gene053203:intron 35.0%
!! AATAAAAGTGTTGGGGTTGA+TGG + chr4.2:92474120-92474139 None:intergenic 35.0%
!! ATTTGGAAGTATCATCTGCA+TGG - chr4.2:92475951-92475970 MS.gene053203:CDS 35.0%
!! CTACTTTTGATAGCCTTTGT+TGG - chr4.2:92473956-92473975 MS.gene053203:intron 35.0%
!! TCTCTAGAATTTCTACGAAG+AGG - chr4.2:92475485-92475504 MS.gene053203:intron 35.0%
!!! AATTTTCGGTGTCTACATGT+CGG + chr4.2:92470751-92470770 None:intergenic 35.0%
!!! ATCTATGCCTTGCTTTTTTC+AGG + chr4.2:92475061-92475080 None:intergenic 35.0%
!!! GAAGCTTTTCTGGTTTATCA+GGG + chr4.2:92472426-92472445 None:intergenic 35.0%
!!! TTCCTGATCTTTTTTGTTCC+CGG - chr4.2:92471703-92471722 MS.gene053203:intron 35.0%
AAAACCTTCCTTGCAAGATG+TGG + chr4.2:92474772-92474791 None:intergenic 40.0%
AAATTACCCCCATGCCAAAA+AGG + chr4.2:92474851-92474870 None:intergenic 40.0%
AAATTCTCCCAAAACCACCA+TGG + chr4.2:92473679-92473698 None:intergenic 40.0%
AATAGCAGTACACGTGAACT+TGG - chr4.2:92473004-92473023 MS.gene053203:intron 40.0%
AATTACCCCCATGCCAAAAA+GGG + chr4.2:92474850-92474869 None:intergenic 40.0%
AGAGCATGAACGTTGAGTTT+AGG + chr4.2:92471518-92471537 None:intergenic 40.0%
AGCTACCGGAAAATTGATAG+AGG - chr4.2:92473415-92473434 MS.gene053203:CDS 40.0%
AGTGTACTTAGGGGACATAA+TGG - chr4.2:92471385-92471404 MS.gene053203:intron 40.0%
AGTTCATTAACCGAACCGAA+CGG + chr4.2:92473826-92473845 None:intergenic 40.0%
AGTTGGAGTTTCTTCTACCA+TGG - chr4.2:92473659-92473678 MS.gene053203:intron 40.0%
ATAAGTGTCCGACGTAGTTA+AGG + chr4.2:92474218-92474237 None:intergenic 40.0%
ATGAAACCTTCTAATGGCAG+AGG + chr4.2:92473057-92473076 None:intergenic 40.0%
ATGAATATGTAGAGCGATGG+AGG + chr4.2:92472983-92473002 None:intergenic 40.0%
ATGGTGAGTGTTTGTCATTC+TGG + chr4.2:92473462-92473481 None:intergenic 40.0%
CATCTAAGGAGCCTATAGTA+AGG + chr4.2:92472676-92472695 None:intergenic 40.0%
CATGAACGTTGAGTTTAGGA+CGG + chr4.2:92471514-92471533 None:intergenic 40.0%
CCACGTCAAATGAGAAATAG+AGG + chr4.2:92474929-92474948 None:intergenic 40.0%
CCCTAACACCGTAATTAGTA+AGG - chr4.2:92474880-92474899 MS.gene053203:intron 40.0%
CCCTTACTAATTACGGTGTT+AGG + chr4.2:92474884-92474903 None:intergenic 40.0%
CCGTAATTAGTAAGGGAAAG+AGG - chr4.2:92474888-92474907 MS.gene053203:intron 40.0%
CGACAGTATGAAATGAGAAG+AGG - chr4.2:92473701-92473720 MS.gene053203:CDS 40.0%
CTTGGACTTCAAGAAGAAGA+GGG - chr4.2:92475458-92475477 MS.gene053203:intron 40.0%
GAACACTTGAGGAACAAAAG+AGG - chr4.2:92473391-92473410 MS.gene053203:intron 40.0%
GAAGAAGGTGAAGAAGATAG+TGG + chr4.2:92470273-92470292 None:intergenic 40.0%
GATCTGAAAAATGAAGCCAC+AGG + chr4.2:92472713-92472732 None:intergenic 40.0%
GCGAGAACTTCATAAGACTT+AGG + chr4.2:92470426-92470445 None:intergenic 40.0%
GGAAGAAAAGTGATGTTGTG+AGG + chr4.2:92470237-92470256 None:intergenic 40.0%
GGACTATTCAATAGAGAAGG+GGG + chr4.2:92474378-92474397 None:intergenic 40.0%
GGCTGTTGTAAAAAAGCTAC+AGG - chr4.2:92472257-92472276 MS.gene053203:intron 40.0%
GGGACTATTCAATAGAGAAG+GGG + chr4.2:92474379-92474398 None:intergenic 40.0%
GGTGACTTTAGTGTACTTAG+GGG - chr4.2:92471376-92471395 MS.gene053203:intron 40.0%
GTACATATCACGGACACTTA+CGG + chr4.2:92470854-92470873 None:intergenic 40.0%
GTCTAAGTCCTTAACTACGT+CGG - chr4.2:92474207-92474226 MS.gene053203:intron 40.0%
GTGGGAAGAAGATTCTGATT+TGG - chr4.2:92475934-92475953 MS.gene053203:CDS 40.0%
TCATAAATCATTCAGGTCCC+TGG - chr4.2:92475253-92475272 MS.gene053203:intron 40.0%
TCCCAAATCTAGTGACATCT+CGG + chr4.2:92472387-92472406 None:intergenic 40.0%
TCCGAGATGTCACTAGATTT+GGG - chr4.2:92472383-92472402 MS.gene053203:intron 40.0%
TGCCAACATTCAACTTGTCT+TGG - chr4.2:92472236-92472255 MS.gene053203:intron 40.0%
TGTCGTATTACTCAGTGTAG+TGG - chr4.2:92470811-92470830 MS.gene053203:intron 40.0%
TTAGGATCGAAACCACGATT+TGG + chr4.2:92470381-92470400 None:intergenic 40.0%
TTGGATTCTTTGACTGCAGT+AGG - chr4.2:92471198-92471217 MS.gene053203:intron 40.0%
! AGAATGAAGGTTAGCTCTTG+CGG - chr4.2:92472768-92472787 MS.gene053203:intron 40.0%
! AGCCAAGACAAGTTGAATGT+TGG + chr4.2:92472241-92472260 None:intergenic 40.0%
! CCTCTATTTCTCATTTGACG+TGG - chr4.2:92474926-92474945 MS.gene053203:intron 40.0%
! GATCAAGTTGTGTGGTCAAT+TGG + chr4.2:92473565-92473584 None:intergenic 40.0%
! GCACACCTCTATCAATTTTC+CGG + chr4.2:92473423-92473442 None:intergenic 40.0%
! TCTTCTACCATGGTGGTTTT+GGG - chr4.2:92473669-92473688 MS.gene053203:intron 40.0%
! TGCTTGTGTCCTTTTTGCTA+TGG - chr4.2:92475556-92475575 MS.gene053203:intron 40.0%
! TTCTTCTACCATGGTGGTTT+TGG - chr4.2:92473668-92473687 MS.gene053203:intron 40.0%
! TTTGGTTCAGTTCGGTTAAC+CGG - chr4.2:92473900-92473919 MS.gene053203:CDS 40.0%
!! AACCGGTTCAGTTCAGTTTT+TGG - chr4.2:92473917-92473936 MS.gene053203:CDS 40.0%
!! AAGGTTGATGGCCTTACTAT+AGG - chr4.2:92472662-92472681 MS.gene053203:intron 40.0%
!! ACATACTTCCCTTTTTGGCA+TGG - chr4.2:92474839-92474858 MS.gene053203:intron 40.0%
!! ATACTTCCCTTTTTGGCATG+GGG - chr4.2:92474841-92474860 MS.gene053203:intron 40.0%
!! CATACTTCCCTTTTTGGCAT+GGG - chr4.2:92474840-92474859 MS.gene053203:intron 40.0%
!! GATAGTGGAGAAAGATGTGA+AGG + chr4.2:92470258-92470277 None:intergenic 40.0%
!! TGAATTCGCAGTGCTGATTT+AGG - chr4.2:92474258-92474277 MS.gene053203:intron 40.0%
!!! CGAAGCTTTTCTGGTTTATC+AGG + chr4.2:92472427-92472446 None:intergenic 40.0%
!!! TCCTGATCTTTTTTGTTCCC+GGG - chr4.2:92471704-92471723 MS.gene053203:intron 40.0%
AAAGATGCAGTGCAGAACCA+CGG + chr4.2:92475636-92475655 None:intergenic 45.0%
AACTCCACATCTTGCAAGGA+AGG - chr4.2:92474765-92474784 MS.gene053203:intron 45.0%
AAGGCTATCAAAAGTAGGGG+TGG + chr4.2:92473953-92473972 None:intergenic 45.0%
AAGTAGGCAGAGATGAACTG+AGG + chr4.2:92472005-92472024 None:intergenic 45.0%
ACTCACTCTTAGCTCCTGAT+TGG - chr4.2:92473299-92473318 MS.gene053203:intron 45.0%
AGATGACATAGCCATAGCCA+TGG + chr4.2:92470211-92470230 None:intergenic 45.0%
AGGCCAAAGAAGAACTGTTG+AGG - chr4.2:92475432-92475451 MS.gene053203:intron 45.0%
AGGCTATCAAAAGTAGGGGT+GGG + chr4.2:92473952-92473971 None:intergenic 45.0%
ATATAGCTGTACCAGGGTAC+TGG + chr4.2:92474535-92474554 None:intergenic 45.0%
CCTCTTCTTCTTGAAGTCCA+AGG + chr4.2:92475460-92475479 None:intergenic 45.0%
CCTTGGACTTCAAGAAGAAG+AGG - chr4.2:92475457-92475476 MS.gene053203:intron 45.0%
CGTGGTTTCGATCCTAAATC+AGG - chr4.2:92470384-92470403 MS.gene053203:intron 45.0%
CTCACTCTTAGCTCCTGATT+GGG - chr4.2:92473300-92473319 MS.gene053203:intron 45.0%
CTCCGAGATGTCACTAGATT+TGG - chr4.2:92472382-92472401 MS.gene053203:intron 45.0%
CTGATCCGAATGTAGAACAC+TGG + chr4.2:92474339-92474358 None:intergenic 45.0%
GAAGAAATGTTGCTGGGCAA+GGG + chr4.2:92471744-92471763 None:intergenic 45.0%
GACCCTCAACAGTTCTTCTT+TGG + chr4.2:92475438-92475457 None:intergenic 45.0%
GGCCAAAGAAGAACTGTTGA+GGG - chr4.2:92475433-92475452 MS.gene053203:intron 45.0%
GGTACTGCAAATCTTTGGGT+GGG + chr4.2:92474296-92474315 None:intergenic 45.0%
GTGATGCTTAAGCAAACCGA+TGG - chr4.2:92475279-92475298 MS.gene053203:intron 45.0%
GTTCGATTAACCGTTCGGTT+CGG - chr4.2:92473813-92473832 MS.gene053203:intron 45.0%
TAGGCTCAGATGCATTGTGA+CGG - chr4.2:92473623-92473642 MS.gene053203:intron 45.0%
TCACTCTTAGCTCCTGATTG+GGG - chr4.2:92473301-92473320 MS.gene053203:intron 45.0%
TCAGTTGTTCAAAGCAGCTC+TGG - chr4.2:92472453-92472472 MS.gene053203:intron 45.0%
TCCTGCAGGGATATCATCTA+AGG + chr4.2:92472690-92472709 None:intergenic 45.0%
TCCTTAGATGATATCCCTGC+AGG - chr4.2:92472686-92472705 MS.gene053203:intron 45.0%
TCTTCATCAGAGCCAAATCG+TGG - chr4.2:92470366-92470385 MS.gene053203:intron 45.0%
TGAAGAAATGTTGCTGGGCA+AGG + chr4.2:92471745-92471764 None:intergenic 45.0%
TGATATTGCAGTCAAGCACG+TGG - chr4.2:92475912-92475931 MS.gene053203:CDS 45.0%
TGGAGTTTCTTCTACCATGG+TGG - chr4.2:92473662-92473681 MS.gene053203:intron 45.0%
TTAATGCGGTCACTGGGATA+GGG + chr4.2:92473587-92473606 None:intergenic 45.0%
TTTAATGCGGTCACTGGGAT+AGG + chr4.2:92473588-92473607 None:intergenic 45.0%
! AGCTATCTGGTGTTAACTGC+TGG + chr4.2:92475158-92475177 None:intergenic 45.0%
! AGCTGCTTTGAACAACTGAG+AGG + chr4.2:92472452-92472471 None:intergenic 45.0%
! GAATGAAGGTTAGCTCTTGC+GGG - chr4.2:92472769-92472788 MS.gene053203:intron 45.0%
! GTTCGGTTCGATTAACCGTT+CGG - chr4.2:92473808-92473827 MS.gene053203:intron 45.0%
! TCGCATGCCTTTGTTTACCA+TGG - chr4.2:92471947-92471966 MS.gene053203:intron 45.0%
! TTCTTAGAAGTGCAGGTCGT+TGG - chr4.2:92472945-92472964 MS.gene053203:intron 45.0%
!! AGTGCTGATTTAGGCCTTCT+AGG - chr4.2:92474267-92474286 MS.gene053203:intron 45.0%
!! TACTTCCCTTTTTGGCATGG+GGG - chr4.2:92474842-92474861 MS.gene053203:intron 45.0%
!! TGGAAGTATCATCTGCATGG+CGG - chr4.2:92475954-92475973 MS.gene053203:CDS 45.0%
!! TTAGCTTGTACACCCCAATC+AGG + chr4.2:92473316-92473335 None:intergenic 45.0%
!!! CCTGATCTTTTTTGTTCCCG+GGG - chr4.2:92471705-92471724 MS.gene053203:intron 45.0%
!!! TTTAAAAGAAAATTTAAAAT+CGG - chr4.2:92471124-92471143 MS.gene053203:intron 5.0%
AAATCATTCAGGTCCCTGGC+AGG - chr4.2:92475257-92475276 MS.gene053203:intron 50.0%
AAGATGCAGTGCAGAACCAC+GGG + chr4.2:92475635-92475654 None:intergenic 50.0%
ACGGAAGTCTCAGATGCAGT+TGG - chr4.2:92473642-92473661 MS.gene053203:intron 50.0%
ATGGTGCCTCTGCCATTAGA+AGG - chr4.2:92473048-92473067 MS.gene053203:intron 50.0%
ATTGCAGTCAAGCACGTGGT+GGG - chr4.2:92475916-92475935 MS.gene053203:CDS 50.0%
CCCCGGGAACAAAAAAGATC+AGG + chr4.2:92471708-92471727 None:intergenic 50.0%
CGGTACTGCAAATCTTTGGG+TGG + chr4.2:92474297-92474316 None:intergenic 50.0%
GAAGAACTGTTGAGGGTCCT+TGG - chr4.2:92475440-92475459 MS.gene053203:intron 50.0%
GGAACAAAAGAGGGAGCTAC+CGG - chr4.2:92473401-92473420 MS.gene053203:intron 50.0%
TATTGCAGTCAAGCACGTGG+TGG - chr4.2:92475915-92475934 MS.gene053203:CDS 50.0%
TGCTTAAGCATCACCTGCCA+GGG + chr4.2:92475273-92475292 None:intergenic 50.0%
TGTTGCGGTTGTTGAGTGTG+TGG - chr4.2:92470973-92470992 MS.gene053203:intron 50.0%
TTGCTTAAGCATCACCTGCC+AGG + chr4.2:92475274-92475293 None:intergenic 50.0%
! ACGTTGAGTTTAGGACGGAG+AGG + chr4.2:92471509-92471528 None:intergenic 50.0%
! CGTTGAGTTTAGGACGGAGA+GGG + chr4.2:92471508-92471527 None:intergenic 50.0%
! GCTTGCGGCTTTTATGTGCT+GGG - chr4.2:92471674-92471693 MS.gene053203:CDS 50.0%
! GGGATAGGGATCAAGTTGTG+TGG + chr4.2:92473573-92473592 None:intergenic 50.0%
! GGTTAGCTCTTGCGGGAAAA+TGG - chr4.2:92472776-92472795 MS.gene053203:intron 50.0%
! TGAGAGGCTCGAAGCTTTTC+TGG + chr4.2:92472436-92472455 None:intergenic 50.0%
! TGCTTGCGGCTTTTATGTGC+TGG - chr4.2:92471673-92471692 MS.gene053203:CDS 50.0%
AATGAAGCCACAGGTCCTGC+AGG + chr4.2:92472704-92472723 None:intergenic 55.0%
AGGGCCTGCATACATAACCC+CGG + chr4.2:92471725-92471744 None:intergenic 55.0%
AGTGCAACTCGCTTCACCCT+TGG - chr4.2:92475324-92475343 MS.gene053203:intron 55.0%
ATGAAGCCACAGGTCCTGCA+GGG + chr4.2:92472703-92472722 None:intergenic 55.0%
CTTTGGGTGGGAAGCCTAGA+AGG + chr4.2:92474284-92474303 None:intergenic 55.0%
GTTCCCGGGGTTATGTATGC+AGG - chr4.2:92471718-92471737 MS.gene053203:intron 55.0%
TGATATCCCTGCAGGACCTG+TGG - chr4.2:92472694-92472713 MS.gene053203:intron 55.0%
GCTGTGTTTCGCCAGTACCC+TGG - chr4.2:92474521-92474540 MS.gene053203:intron 60.0%
GGGCCTGCATACATAACCCC+GGG + chr4.2:92471724-92471743 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 92470198 92475982 92470198 ID=MS.gene053203
chr4.2 mRNA 92470198 92475982 92470198 ID=MS.gene053203.t1;Parent=MS.gene053203
chr4.2 exon 92475666 92475982 92475666 ID=MS.gene053203.t1.exon1;Parent=MS.gene053203.t1
chr4.2 CDS 92475666 92475982 92475666 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92474410 92474440 92474410 ID=MS.gene053203.t1.exon2;Parent=MS.gene053203.t1
chr4.2 CDS 92474410 92474440 92474410 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92473875 92473967 92473875 ID=MS.gene053203.t1.exon3;Parent=MS.gene053203.t1
chr4.2 CDS 92473875 92473967 92473875 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92473700 92473762 92473700 ID=MS.gene053203.t1.exon4;Parent=MS.gene053203.t1
chr4.2 CDS 92473700 92473762 92473700 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92473404 92473515 92473404 ID=MS.gene053203.t1.exon5;Parent=MS.gene053203.t1
chr4.2 CDS 92473404 92473515 92473404 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92473135 92473220 92473135 ID=MS.gene053203.t1.exon6;Parent=MS.gene053203.t1
chr4.2 CDS 92473135 92473220 92473135 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92472017 92472075 92472017 ID=MS.gene053203.t1.exon7;Parent=MS.gene053203.t1
chr4.2 CDS 92472017 92472075 92472017 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92471809 92471911 92471809 ID=MS.gene053203.t1.exon8;Parent=MS.gene053203.t1
chr4.2 CDS 92471809 92471911 92471809 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92471638 92471698 92471638 ID=MS.gene053203.t1.exon9;Parent=MS.gene053203.t1
chr4.2 CDS 92471638 92471698 92471638 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92470830 92470912 92470830 ID=MS.gene053203.t1.exon10;Parent=MS.gene053203.t1
chr4.2 CDS 92470830 92470912 92470830 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92470666 92470746 92470666 ID=MS.gene053203.t1.exon11;Parent=MS.gene053203.t1
chr4.2 CDS 92470666 92470746 92470666 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
chr4.2 exon 92470198 92470257 92470198 ID=MS.gene053203.t1.exon12;Parent=MS.gene053203.t1
chr4.2 CDS 92470198 92470257 92470198 ID=cds.MS.gene053203.t1;Parent=MS.gene053203.t1
Gene Sequence

>MS.gene053203

ATGCTACTATCCATGGCTATGGCTATGTCATCTCTGCCTCACAACATCACTTTTCTTCCTTCACATCTTTCTCCACTATCTTCTTCACCTTCTTCAATTTCTACTACTAAATCTCTTCGAAACACTTCTTTATTCAAAATCAAATGCATTAAAACCGAAAAAGAAGCTTCTTCATCAGAGCCAAATCGTGGTTTCGATCCTAAATCAGGTGTATCTGTTTACAAACCTAAGTCTTATGAAGTTCTCGCTACTGATGCTGCTAATTCACTCAATTTTGCTCTTCAAGATGGAAAACTGAGACTCGAAATCGATTTCCCGTACGTTTAACTCTCATTCTCTTTTTCAGTTACTATATTGAGTTTACTTGAGTGTAAGTAGTTTATGTTTGGATACATTTATGTAAGAATTTAATTAGTATATTATGCATGTACAATTGTTTTACACATGCATGTGTACAATTATTTTACATATGCATATGTGTCGCCACATCAGTCAATTAATGAATATGAAAACACATGAATTGTGTAATAATTGTACACTAAGTGAGACACCGACATGTAGACACCGAAAATTTGAGAAAATAGCAATGATTGAACGTAATCACATGTGTCAGTGTCGTATTACTCAGTGTAGTGGCACATACACATCTTGAACCGTAAGTGTCCGTGATATGTACTACATAGAACTAGTCTTATCACTATGGTTGCATTCTTGATATTGTGAAATTTATGGATAAATGGAGAGTTAGTTGTTGATGAGTCTGTCAAAATCTTTATGTTGCGGTTGTTGAGTGTGTGGATCACAATTTGAAACTATATTTGTAGGGAATTTGGATTCTATGTAGTCAAAGATTCCTTGTATTCATGCATTAGCTTGGAGCCAATTGATCAATATTTTAATTCTGATTTTAATTTCAATAAATCAGCTTTAAAAGAAAATTTAAAATCGGAAATGTTGGGTCTTGATTCTATGGCTTCGAGCTATTGACTATGTGAAAGCATTGGATTCTTTGACTGCAGTAGGTAATCAAAATTTGCTTATAGTTGCTTTGCTATTATTATGGATGCATGGTTTGAATGTTTTTAATTGAGAGCTAATATTGATTGAGAAACTGTATTGCAAATTACTTGTTTGGATCTTTGTCTTACACAAAAATAGATTCTCTACCGTTGATATTTGGTGACTTTAGTGTACTTAGGGGACATAATGGTAATTAAAAGGAGATTATTTGGTTGAGAGATAATATTTGGTTAAGACAGAGATAGAGAGAAAGTTACCAAAATGTAGACAATCGAAAGGGAGAGAATCCCTCTCCGTCCTAAACTCAACGTTCATGCTCTCAATATTTAATATTATTCAATATTTATCTATGGAAAGGTAAACATGATTGACCTACATTTTCAACATTTTTTCTTCTTTCAAATCTTTATAACTCAAGCTTAGTGTAAGTTAATCTACACATAATAACAATATTTTGCTTGCGGCTTTTATGTGCTGGGATTCCATTCCTGATCTTTTTTGTTCCCGGGGTTATGTATGCAGGCCCTTGCCCAGCAACATTTCTTCATATAAGGTACTATTCTTTGCTCTGGTGATGCATGCTTTCTCAAGTGAAGTGAATTATTTGTTTCAGTTTTGGTCCTTCATTGTATATAGGTCTATGTTTTTGGAGAGAGTAATAACTAATAATTACGAAGTTCCAAATATTAGTAGGATAAATTATACATTTTCAAATTATTGATGATCTTGTCGCATGCCTTTGTTTACCATGGATTTTAACAAATTTTCATTATGGCTCTTTATGCCTCAGTTCATCTCTGCCTACTTCTGATTAGCAAAATATTTCAACAAGTTAGTTATTTAGTTGATATTTGTAGCTAAGCTAATATGATGGGCTAAGATGATTTCATTTTCATGCTTAAAGAAACTGTTCTGATTGACAGTTGACGTTTTTGAGGCATGCTTGTCTCTGAATACATTGCACATAATTTTCTCAAATTCCTAAATATTTCAAGGGATCTTCAGATGATTTCATCGATGCCAACATTCAACTTGTCTTGGCTGTTGTAAAAAAGCTACAGGAGAAAAAAGAGACTAGAGCTTGCATAGTAAGAAAATACAACTTTTTTTTTGCCCTTTCAAAGCAACAAATACTTCTTTTCACAGATAAATTTTATAATGTTTCTCCGAGATGTCACTAGATTTGGGACTTTTTTGTAGGTATTCCCTGATAAACCAGAAAAGCTTCGAGCCTCTCAGTTGTTCAAAGCAGCTCTGGATTCAGTAATGAAAAATTTATTATGAATATTCTTATTTACTATGAGGCTTTTCTAAAGAAAATGCTATAAAATGATCACACTATTGCAAAATTCTAAAGTATTTAAACTATGTACCATAAAGAATGAAGATATCATAGTCATATTGAAGCCTGTCATATTCTGAAGTTTCATCTTTATTTTGTTTCAAGGTTGATGGCCTTACTATAGGCTCCTTAGATGATATCCCTGCAGGACCTGTGGCTTCATTTTTCAGATCTGTTAGAAACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGTTAGCTCTTGCGGGAAAATGGATTTTTAAGTAATAATAACTTTTTTAATCTAGTTACCATGTTTGAAACTTATGCGTTACAGTATCAAATTTTTCTTGAGTCATATTGGTTAAGCTTTGTTTCTATGTAAAACACGCATGATAAAAACAATATTTTGACAATTAAATTTCTTAGAAGTGCAGGTCGTTGGCAGTCAAGTGAACCTCCATCGCTCTACATATTCATTAATAGCAGTACACGTGAACTTGGTTATATTGAGAAGTATGTGGTATGGTGCCTCTGCCATTAGAAGGTTTCATGATTTTTTATCTGTTCGGTATCAAATCTTTGACGTGCAAATGAAATTTCATTCTTATCTGTATTAGCTTGGTCTTTGATTCTTTGGTAGGAGACGTTTATTTTTTCTCCATTGGTGATAAATAATGTGCAAATACAAGACTTGAGTTCTTTCATTTGTTTTTTTTGGTCAGCATGCAAAATTCTGCAATTTGTTGAGTTTAGCTTCTCTGTCAATTGTTACAACTCACTCTTAGCTCCTGATTGGGGTGTACAAGCTAATACTGATTTAATGCTAATTTATACTGTCAAACCCAAGGGAATATAATCATACTAAGAACACTTGAGGAACAAAAGAGGGAGCTACCGGAAAATTGATAGAGGTGTGCCCCTATATTTCTAATTCCAGAATGACAAACACTCACCATTACCAATAGCACAATATAAACCAAAAGAAAGAATAATCCCTATCCCTACAGCTGTATTATACTGAAGACAACAAAGATCACCAATTGACCACACAACTTGATCCCTATCCCAGTGACCGCATTAAATAGTAAAACTTGATGTAGGCTCAGATGCATTGTGACGGAAGTCTCAGATGCAGTTGGAGTTTCTTCTACCATGGTGGTTTTGGGAGAATTTTGCGACAGTATGAAATGAGAAGAGGGAAAGTTGAGATTTTGGTTCAATTTGTTCAAAAAGGGTTTGGGTTGATTAAGATGTAATGGTTCGGTTCAGTTAATTGAGTTCAGTTCGGTTCGATTAACCGTTCGGTTCGGTTAATGAACTGTTTAAAAGAACGGTTCAGTTCAATAACCAATGTAATGGTTCGGTTAATTTTAGTTTGGTTCAGTTCGGTTAACCGGTTCAGTTCAGTTTTTGGATATTTTTGCCCACCCCTACTTTTGATAGCCTTTGTTGGTGAAATGTGAGTTTCTTAATATGGATAGATAATCAATTTATTTGATTGAACACGTTAATTATGTGCACTGGCTTCGCCTAGTTATTTAATTTGATGTATATATCTTCTATTACTACTATTTTGCAGGAAAAATTTGCTCCATCAACCCCAACACTTTTATTTAATCTTGAGCTAGATACACTACGGTATATGTTGTACTCTTTTTTGTTTATTGGAATTTTCATGCATGTCTAAGTCCTTAACTACGTCGGACACTTATGTTTGACAAATATTAAATACTGAATTCGCAGTGCTGATTTAGGCCTTCTAGGCTTCCCACCCAAAGATTTGCAGTACCGTTTTCTTTCTCAATTTACTCCAGTGTTCTACATTCGGATCAGAGATTATTCAAAGGTACCCCCTTCTCTATTGAATAGTCCCTAGATATTTATCATTATCTGAGTAAAAAAATAATATTTTCTCAAATAATATGAGGCATTGACTGTACTTTTGCTCTTTTCTAGACAGTTGCAGTAGCACCTTATATTGTCAATTACAGTGGAGCTGTGTTTCGCCAGTACCCTGGTACAGCTATATATTTATATGCGATATTTACATACATGCATGTATGTGAGCAACACACTCTTATCAAATGTTTTCTACCTAATAATCTGTGATACATGATCTATAAATTAAATATAACGTTATTAAAACTAAAGCTAAACTGAAATACAATGCTGAGAGAAGTTGTGTTAAAAGAAAGGTCGTATTTGTACTAATGCTTCTTACCACCAGTTATCTAATATTAACTCCACATCTTGCAAGGAAGGTTTTCAGTATATGTAACAACAATAGGTGATGTTCTATAAAAGAATGTGCTTACATACTTCCCTTTTTGGCATGGGGGTAATTTTTTTTTTTACCCTAACACCGTAATTAGTAAGGGAAAGAGGAATATGGCCATATTTCCTCTATTTCTCATTTGACGTGGCTAAATTCCTTTGACTTGAAGTAAGTCACAAAGAATTATCAAAATCTGGCTTTGTTGTCCTTACCTTATTGCATATTACATGATAACTAATGGCAAGATATCTGTATCACCTGAAAAAAGCAAGGCATAGATGTCAAATTGTCAATAAGAAAAAGGGAGGATATCAATATTCATTTGATGTAATGAATTTGGAAAAGCACATTTAACCAGCAGTTAACACCAGATAGCTAGTTTTTTTTTATTTTTATTGTACAACCAATATGCTTTTATTTGACAATTATATGAATGATGCCCTAAATTTTTTTCATAAATCATTCAGGTCCCTGGCAGGTGATGCTTAAGCAAACCGATGGTTCTTATGCTTGTGTAGCAGAAAGTGCAACTCGCTTCACCCTTGGTGAAGTAAGTTCATGAACTTCACCTTATTTTCTTACTAACTGTGAATATTTGTGTATACCTTATCTAATATCTATTGGCTTGTCTAGGCCAAAGAAGAACTGTTGAGGGTCCTTGGACTTCAAGAAGAAGAGGGAAGCTCTCTAGAATTTCTACGAAGAGGCTATAGGGTATTCTTGTTTACTTAATCCGTTTGCGTTGCTTTTATGCATGCTTGTGTCCTTTTTGCTATGGTTGAAATAATTATTTTTACTGTTATTTTTCCTCTTATGTAAAATTTACACATTCCCGTGGTTCTGCACTGCATCTTTATAATGCTATTCCCAATTATATTCCCTAATGTGCATTTTTCCTCTTATGTAAAATTTACACATTCCCGTGGTTCTGCACTGCATCTTTATAATGCTATTCCCAATTATATTCCCTAATGTGCATAAATACCAACCTTCTTAAAATATTTATACAAGTGAATTGAGCCAAATTTTCATTATAGTGGGTTATTATAGGATCATAAATCATATTTGGCCATGTCTCTAGTCCAGTTTTAAATCTGTTACCAACATCTTGTGATATTGCAGTCAAGCACGTGGTGGGAAGAAGATTCTGATTTGGAAGTATCATCTGCATGGCGGACCTGA

Protein sequence

>MS.gene053203.t1

MLLSMAMAMSSLPHNITFLPSHLSPLSSSPSSISTTKSLRNTSLFKIKCIKTEKEASSSEPNRGFDPKSGVSVYKPKSYEVLATDAANSLNFALQDGKLRLEIDFPPLPSNISSYKGSSDDFIDANIQLVLAVVKKLQEKKETRACIVFPDKPEKLRASQLFKAALDSVDGLTIGSLDDIPAGPVASFFRSVRNTLDFDFEDENEGRWQSSEPPSLYIFINSSTRELGYIEKYVEKFAPSTPTLLFNLELDTLRADLGLLGFPPKDLQYRFLSQFTPVFYIRIRDYSKTVAVAPYIVNYSGAVFRQYPGPWQVMLKQTDGSYACVAESATRFTLGEAKEELLRVLGLQEEEGSSLEFLRRGYRSSTWWEEDSDLEVSSAWRT