Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65336.t1 | XP_013453593.1 | 90.8 | 948 | 87 | 0 | 1 | 948 | 1 | 948 | 0.00E+00 | 1699.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65336.t1 | Q84W41 | 57.3 | 910 | 375 | 5 | 5 | 913 | 3 | 899 | 2.5e-311 | 1069.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65336.t1 | G7K195 | 90.8 | 948 | 87 | 0 | 1 | 948 | 33 | 980 | 0.0e+00 | 1699.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052318 | MS.gene65336 | 0.801589 | 8.39E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene65336 | 0.804669 | 1.93E-49 | -1.69E-46 |
| MS.gene054486 | MS.gene65336 | 0.827197 | 1.79E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene65336 | 0.805532 | 1.28E-49 | -1.69E-46 |
| MS.gene055787 | MS.gene65336 | -0.806996 | 6.27E-50 | -1.69E-46 |
| MS.gene05601 | MS.gene65336 | 0.80304 | 4.21E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene65336 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene65336 | 0.81526 | 1.01E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene65336 | 0.852887 | 3.44E-61 | -1.69E-46 |
| MS.gene060485 | MS.gene65336 | 0.802249 | 6.14E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65336 | MS.gene32229 | PPI |
| MS.gene65336 | MS.gene28682 | PPI |
| MS.gene65336 | MS.gene052584 | PPI |
| MS.gene65336 | MS.gene052582 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65336.t1 | MTR_5g024350 | 96.308 | 948 | 35 | 0 | 1 | 948 | 33 | 980 | 0.0 | 1893 |
| MS.gene65336.t1 | MTR_5g024350 | 96.308 | 948 | 35 | 0 | 1 | 948 | 1 | 948 | 0.0 | 1891 |
| MS.gene65336.t1 | MTR_8g073210 | 71.629 | 927 | 260 | 2 | 1 | 926 | 1 | 925 | 0.0 | 1400 |
| MS.gene65336.t1 | MTR_3g115910 | 56.718 | 908 | 372 | 8 | 4 | 909 | 53 | 941 | 0.0 | 1066 |
| MS.gene65336.t1 | MTR_3g115910 | 56.718 | 908 | 372 | 8 | 4 | 909 | 8 | 896 | 0.0 | 1065 |
| MS.gene65336.t1 | MTR_8g073490 | 55.809 | 921 | 388 | 10 | 1 | 911 | 1 | 912 | 0.0 | 1030 |
| MS.gene65336.t1 | MTR_8g073210 | 71.012 | 652 | 188 | 1 | 1 | 651 | 1 | 652 | 0.0 | 984 |
| MS.gene65336.t1 | MTR_8g073210 | 71.293 | 634 | 181 | 1 | 1 | 633 | 1 | 634 | 0.0 | 962 |
| MS.gene65336.t1 | MTR_2g088450 | 52.626 | 895 | 404 | 7 | 26 | 907 | 32 | 919 | 0.0 | 956 |
| MS.gene65336.t1 | MTR_3g115910 | 58.483 | 778 | 309 | 5 | 4 | 779 | 8 | 773 | 0.0 | 939 |
| MS.gene65336.t1 | MTR_2g088450 | 53.708 | 836 | 368 | 6 | 85 | 907 | 25 | 854 | 0.0 | 915 |
| MS.gene65336.t1 | MTR_2g088450 | 54.051 | 827 | 361 | 6 | 94 | 907 | 1 | 821 | 0.0 | 910 |
| MS.gene65336.t1 | MTR_2g088430 | 43.805 | 904 | 486 | 10 | 1 | 897 | 10 | 898 | 0.0 | 814 |
| MS.gene65336.t1 | MTR_8g073210 | 70.610 | 541 | 158 | 1 | 1 | 540 | 1 | 541 | 0.0 | 813 |
| MS.gene65336.t1 | MTR_2g088450 | 54.098 | 671 | 299 | 3 | 26 | 694 | 32 | 695 | 0.0 | 740 |
| MS.gene65336.t1 | MTR_3g115910 | 54.091 | 660 | 285 | 6 | 4 | 661 | 53 | 696 | 0.0 | 733 |
| MS.gene65336.t1 | MTR_3g115910 | 54.091 | 660 | 285 | 6 | 4 | 661 | 8 | 651 | 0.0 | 732 |
| MS.gene65336.t1 | MTR_2g088450 | 51.774 | 620 | 290 | 3 | 26 | 643 | 32 | 644 | 0.0 | 662 |
| MS.gene65336.t1 | MTR_2g088450 | 53.804 | 552 | 247 | 2 | 94 | 643 | 1 | 546 | 0.0 | 617 |
| MS.gene65336.t1 | MTR_2g088450 | 52.920 | 548 | 250 | 2 | 94 | 639 | 1 | 542 | 0.0 | 599 |
| MS.gene65336.t1 | MTR_3g105610 | 33.781 | 894 | 536 | 23 | 1 | 863 | 13 | 881 | 6.93e-150 | 469 |
| MS.gene65336.t1 | MTR_3g105595 | 35.742 | 775 | 468 | 18 | 108 | 863 | 1 | 764 | 1.39e-146 | 457 |
| MS.gene65336.t1 | MTR_4g087925 | 31.243 | 893 | 530 | 26 | 5 | 872 | 19 | 852 | 3.55e-117 | 380 |
| MS.gene65336.t1 | MTR_2g015270 | 28.320 | 964 | 587 | 29 | 1 | 929 | 11 | 905 | 1.85e-103 | 347 |
| MS.gene65336.t1 | MTR_2g015280 | 27.146 | 862 | 533 | 25 | 27 | 867 | 32 | 819 | 4.26e-86 | 296 |
| MS.gene65336.t1 | MTR_2g015310 | 27.483 | 866 | 530 | 26 | 34 | 874 | 41 | 833 | 6.33e-85 | 293 |
| MS.gene65336.t1 | MTR_2g015290 | 26.986 | 856 | 527 | 25 | 27 | 855 | 33 | 817 | 2.83e-81 | 283 |
| MS.gene65336.t1 | MTR_5g059920 | 28.082 | 876 | 529 | 28 | 28 | 862 | 36 | 851 | 5.22e-81 | 282 |
| MS.gene65336.t1 | MTR_0018s0240 | 28.086 | 794 | 457 | 24 | 100 | 862 | 49 | 759 | 1.23e-77 | 271 |
| MS.gene65336.t1 | MTR_2g015260 | 27.696 | 751 | 449 | 22 | 208 | 943 | 32 | 703 | 1.38e-74 | 259 |
| MS.gene65336.t1 | MTR_5g059900 | 27.419 | 806 | 482 | 24 | 94 | 862 | 3 | 742 | 4.34e-72 | 254 |
| MS.gene65336.t1 | MTR_5g059920 | 28.643 | 796 | 471 | 28 | 28 | 789 | 36 | 768 | 6.73e-71 | 251 |
| MS.gene65336.t1 | MTR_0018s0230 | 31.677 | 483 | 297 | 12 | 396 | 862 | 270 | 735 | 7.97e-65 | 234 |
| MS.gene65336.t1 | MTR_0018s0230 | 32.857 | 420 | 256 | 10 | 396 | 807 | 270 | 671 | 3.13e-55 | 204 |
| MS.gene65336.t1 | MTR_6g045087 | 32.000 | 400 | 250 | 10 | 472 | 851 | 40 | 437 | 7.63e-49 | 181 |
| MS.gene65336.t1 | MTR_5g060330 | 25.794 | 535 | 325 | 19 | 99 | 606 | 10 | 499 | 1.88e-28 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65336.t1 | AT3G51480 | 57.253 | 910 | 375 | 5 | 5 | 913 | 3 | 899 | 0.0 | 1105 |
| MS.gene65336.t1 | AT3G51480 | 57.253 | 910 | 375 | 5 | 5 | 913 | 3 | 899 | 0.0 | 1105 |
| MS.gene65336.t1 | AT1G42540 | 57.096 | 916 | 372 | 8 | 25 | 931 | 22 | 925 | 0.0 | 1073 |
| MS.gene65336.t1 | AT1G42540 | 57.096 | 916 | 372 | 8 | 25 | 931 | 22 | 925 | 0.0 | 1073 |
| MS.gene65336.t1 | AT1G42540 | 57.096 | 916 | 372 | 8 | 25 | 931 | 22 | 925 | 0.0 | 1073 |
| MS.gene65336.t1 | AT3G51480 | 58.709 | 821 | 326 | 4 | 94 | 913 | 1 | 809 | 0.0 | 1026 |
| MS.gene65336.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 989 |
| MS.gene65336.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 989 |
| MS.gene65336.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 989 |
| MS.gene65336.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 989 |
| MS.gene65336.t1 | AT4G35290 | 52.928 | 922 | 408 | 10 | 5 | 914 | 3 | 910 | 0.0 | 989 |
| MS.gene65336.t1 | AT2G17260 | 53.407 | 910 | 402 | 12 | 5 | 904 | 7 | 904 | 0.0 | 959 |
| MS.gene65336.t1 | AT3G51480 | 57.935 | 775 | 313 | 4 | 5 | 779 | 3 | 764 | 0.0 | 954 |
| MS.gene65336.t1 | AT1G05200 | 52.440 | 881 | 401 | 6 | 28 | 897 | 57 | 930 | 0.0 | 937 |
| MS.gene65336.t1 | AT1G05200 | 52.440 | 881 | 401 | 6 | 28 | 897 | 57 | 930 | 0.0 | 937 |
| MS.gene65336.t1 | AT1G05200 | 52.440 | 881 | 401 | 6 | 28 | 897 | 57 | 930 | 0.0 | 937 |
| MS.gene65336.t1 | AT2G32390 | 50.171 | 877 | 425 | 5 | 32 | 897 | 48 | 923 | 0.0 | 887 |
| MS.gene65336.t1 | AT4G35290 | 54.534 | 783 | 334 | 8 | 5 | 779 | 3 | 771 | 0.0 | 862 |
| MS.gene65336.t1 | AT2G32390 | 50.978 | 818 | 390 | 4 | 91 | 897 | 4 | 821 | 0.0 | 844 |
| MS.gene65336.t1 | AT2G32390 | 50.796 | 817 | 391 | 4 | 92 | 897 | 49 | 865 | 0.0 | 841 |
| MS.gene65336.t1 | AT1G05200 | 54.582 | 753 | 334 | 3 | 28 | 779 | 57 | 802 | 0.0 | 839 |
| MS.gene65336.t1 | AT1G05200 | 54.582 | 753 | 334 | 3 | 28 | 779 | 57 | 802 | 0.0 | 839 |
| MS.gene65336.t1 | AT2G32400 | 43.581 | 888 | 478 | 10 | 25 | 902 | 24 | 898 | 0.0 | 751 |
| MS.gene65336.t1 | AT1G42540 | 56.501 | 623 | 261 | 5 | 25 | 643 | 22 | 638 | 0.0 | 731 |
| MS.gene65336.t1 | AT2G32390 | 51.369 | 621 | 301 | 1 | 32 | 652 | 48 | 667 | 0.0 | 676 |
| MS.gene65336.t1 | AT1G05200 | 52.657 | 621 | 287 | 2 | 28 | 648 | 57 | 670 | 0.0 | 672 |
| MS.gene65336.t1 | AT2G32390 | 50.485 | 618 | 305 | 1 | 32 | 649 | 48 | 664 | 0.0 | 663 |
| MS.gene65336.t1 | AT2G32390 | 50.485 | 618 | 305 | 1 | 32 | 649 | 48 | 664 | 0.0 | 663 |
| MS.gene65336.t1 | AT1G05200 | 52.224 | 607 | 283 | 2 | 28 | 634 | 57 | 656 | 0.0 | 651 |
| MS.gene65336.t1 | AT2G32390 | 49.917 | 603 | 301 | 1 | 32 | 634 | 48 | 649 | 0.0 | 639 |
| MS.gene65336.t1 | AT5G27100 | 33.639 | 871 | 515 | 22 | 32 | 873 | 32 | 868 | 3.72e-154 | 478 |
| MS.gene65336.t1 | AT5G11180 | 34.226 | 859 | 536 | 16 | 32 | 879 | 36 | 876 | 1.19e-153 | 478 |
| MS.gene65336.t1 | AT2G29100 | 34.926 | 879 | 526 | 22 | 32 | 900 | 32 | 874 | 1.72e-152 | 474 |
| MS.gene65336.t1 | AT2G29100 | 34.926 | 879 | 526 | 22 | 32 | 900 | 30 | 872 | 3.01e-152 | 474 |
| MS.gene65336.t1 | AT5G11210 | 33.684 | 855 | 523 | 17 | 68 | 905 | 14 | 841 | 4.14e-152 | 471 |
| MS.gene65336.t1 | AT5G11210 | 34.337 | 830 | 501 | 17 | 93 | 905 | 15 | 817 | 1.01e-151 | 469 |
| MS.gene65336.t1 | AT5G11210 | 33.408 | 892 | 547 | 20 | 32 | 905 | 37 | 899 | 1.24e-151 | 472 |
| MS.gene65336.t1 | AT2G29110 | 35.223 | 829 | 503 | 16 | 32 | 852 | 33 | 835 | 1.16e-150 | 470 |
| MS.gene65336.t1 | AT2G29110 | 35.223 | 829 | 503 | 16 | 32 | 852 | 34 | 836 | 1.27e-150 | 470 |
| MS.gene65336.t1 | AT2G29120 | 32.860 | 916 | 557 | 24 | 32 | 933 | 39 | 910 | 6.87e-150 | 468 |
| MS.gene65336.t1 | AT2G24720 | 34.712 | 798 | 482 | 17 | 32 | 815 | 32 | 804 | 1.31e-145 | 456 |
| MS.gene65336.t1 | AT4G31710 | 34.143 | 823 | 471 | 21 | 30 | 817 | 7 | 793 | 6.82e-143 | 448 |
| MS.gene65336.t1 | AT5G11210 | 36.402 | 706 | 407 | 15 | 90 | 779 | 20 | 699 | 2.04e-140 | 436 |
| MS.gene65336.t1 | AT4G31710 | 34.000 | 800 | 471 | 20 | 31 | 817 | 54 | 809 | 4.15e-140 | 441 |
| MS.gene65336.t1 | AT5G11210 | 36.273 | 703 | 406 | 15 | 93 | 779 | 15 | 691 | 8.57e-140 | 434 |
| MS.gene65336.t1 | AT5G11210 | 36.273 | 703 | 406 | 15 | 93 | 779 | 15 | 691 | 8.57e-140 | 434 |
| MS.gene65336.t1 | AT5G11210 | 35.033 | 765 | 452 | 18 | 32 | 779 | 37 | 773 | 9.06e-140 | 437 |
| MS.gene65336.t1 | AT5G11210 | 35.033 | 765 | 452 | 18 | 32 | 779 | 37 | 773 | 9.06e-140 | 437 |
| MS.gene65336.t1 | AT5G11210 | 36.273 | 703 | 406 | 15 | 93 | 779 | 15 | 691 | 1.29e-139 | 434 |
| MS.gene65336.t1 | AT5G11210 | 35.033 | 765 | 452 | 18 | 32 | 779 | 37 | 773 | 1.33e-139 | 436 |
| MS.gene65336.t1 | AT2G24710 | 31.972 | 857 | 544 | 17 | 43 | 882 | 42 | 876 | 8.60e-136 | 429 |
| MS.gene65336.t1 | AT2G24710 | 31.972 | 857 | 544 | 17 | 43 | 882 | 66 | 900 | 9.86e-136 | 430 |
| MS.gene65336.t1 | AT2G24710 | 33.110 | 746 | 471 | 13 | 43 | 779 | 66 | 792 | 5.98e-128 | 406 |
| MS.gene65336.t1 | AT5G11180 | 31.119 | 858 | 503 | 18 | 32 | 879 | 36 | 815 | 5.38e-118 | 382 |
| MS.gene65336.t1 | AT3G07520 | 27.466 | 892 | 552 | 24 | 5 | 864 | 12 | 840 | 3.29e-94 | 317 |
| MS.gene65336.t1 | AT5G48400 | 28.284 | 845 | 520 | 24 | 32 | 859 | 40 | 815 | 2.92e-91 | 309 |
| MS.gene65336.t1 | AT5G48410 | 27.391 | 847 | 540 | 23 | 32 | 869 | 42 | 822 | 4.28e-88 | 300 |
| MS.gene65336.t1 | AT5G48400 | 28.758 | 765 | 461 | 23 | 32 | 779 | 40 | 737 | 2.66e-85 | 290 |
| MS.gene65336.t1 | AT5G48410 | 28.137 | 757 | 471 | 22 | 32 | 779 | 42 | 734 | 4.11e-83 | 285 |
| MS.gene65336.t1 | AT3G04110 | 26.268 | 887 | 547 | 24 | 6 | 870 | 4 | 805 | 1.41e-79 | 276 |
| MS.gene65336.t1 | AT5G48410 | 26.284 | 837 | 513 | 23 | 32 | 858 | 42 | 784 | 3.20e-74 | 261 |
| MS.gene65336.t1 | AT3G04110 | 28.198 | 688 | 425 | 18 | 6 | 683 | 4 | 632 | 8.35e-73 | 256 |
| MS.gene65336.t1 | AT5G48410 | 26.165 | 837 | 510 | 24 | 32 | 858 | 42 | 780 | 3.69e-71 | 253 |
| MS.gene65336.t1 | AT5G11210 | 34.694 | 392 | 242 | 7 | 522 | 905 | 6 | 391 | 3.53e-68 | 234 |
| MS.gene65336.t1 | AT3G04110 | 24.803 | 887 | 532 | 24 | 6 | 870 | 4 | 777 | 1.17e-66 | 239 |
Find 198 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTGGAATGAATTGTTTC+TGG | 0.166017 | 5.2:-15211923 | None:intergenic |
| TAAGCTTTCAATGCCTTTAA+TGG | 0.174089 | 5.2:-15213297 | None:intergenic |
| TGGAACTGTAGTTTGGATTT+TGG | 0.188541 | 5.2:+15212536 | MS.gene65336:CDS |
| CTGAGCATCATAATCTTTAT+TGG | 0.204930 | 5.2:-15214207 | None:intergenic |
| TCGCAACACTAAACACTTTC+GGG | 0.205231 | 5.2:-15211340 | None:intergenic |
| TACAAATCCCCAGCCGTTTC+TGG | 0.207905 | 5.2:-15213558 | None:intergenic |
| AACCACATCCTTGGTGTAAA+TGG | 0.226841 | 5.2:-15212486 | None:intergenic |
| GGCTTCTGAGCTGTGTTTCC+AGG | 0.230286 | 5.2:-15211992 | None:intergenic |
| TTGGTCTTGCCGAGAATATT+TGG | 0.235404 | 5.2:-15210527 | None:intergenic |
| GGCATTGAAAGCTTAGTAAT+TGG | 0.241024 | 5.2:+15213305 | MS.gene65336:CDS |
| AAAGAAAGTTTGTTTCTAAA+TGG | 0.241296 | 5.2:+15211516 | MS.gene65336:CDS |
| CCATATGGAATAAACTTATA+AGG | 0.245835 | 5.2:-15212178 | None:intergenic |
| ACTTGTTCACTTCCACAATT+AGG | 0.259020 | 5.2:-15214257 | None:intergenic |
| CCTTATAAGTTTATTCCATA+TGG | 0.280340 | 5.2:+15212178 | MS.gene65336:CDS |
| GCTCCAATATTTACAATATC+AGG | 0.286846 | 5.2:-15210425 | None:intergenic |
| AACTATTTAATCCAAGATAT+TGG | 0.289008 | 5.2:+15213368 | MS.gene65336:CDS |
| CCTGAAGTTATTGCCTGGTT+TGG | 0.296388 | 5.2:-15211939 | None:intergenic |
| CCGATCAAAGAGAAAGAAAA+TGG | 0.305618 | 5.2:+15214136 | MS.gene65336:CDS |
| AAGCTTTCAATGCCTTTAAT+GGG | 0.306277 | 5.2:-15213296 | None:intergenic |
| TTCGCAACACTAAACACTTT+CGG | 0.306463 | 5.2:-15211341 | None:intergenic |
| ATCTCCTCTGCAGTTGCTTC+GGG | 0.310294 | 5.2:-15211245 | None:intergenic |
| AGGCCTGATATTGTAAATAT+TGG | 0.310296 | 5.2:+15210422 | MS.gene65336:CDS |
| CATCAACCATGGTTAAAGTT+TGG | 0.314545 | 5.2:+15210333 | None:intergenic |
| AGACACAATGTGGCAATAAT+TGG | 0.321739 | 5.2:+15210921 | MS.gene65336:CDS |
| CAAGTTGAAGCTCTCTCTTC+AGG | 0.325134 | 5.2:+15210547 | MS.gene65336:CDS |
| TGAGATTCTGCAACGCTTCT+CGG | 0.330906 | 5.2:-15211204 | None:intergenic |
| CATGGTTAAAGTTTGGCTAT+TGG | 0.335807 | 5.2:+15210340 | None:intergenic |
| ATTGTCTACCATTTGCAAAA+TGG | 0.336897 | 5.2:-15213823 | None:intergenic |
| TATCTCCTCTGCAGTTGCTT+CGG | 0.342196 | 5.2:-15211246 | None:intergenic |
| CTAGTTTCTGTCTCCCTAAC+AGG | 0.342346 | 5.2:-15212444 | None:intergenic |
| TATTAGTTGGAACTGTAGTT+TGG | 0.343379 | 5.2:+15212529 | MS.gene65336:CDS |
| CAGCCATCTCCACGCATAAC+TGG | 0.344607 | 5.2:+15214227 | MS.gene65336:CDS |
| ACGATCCTGAGCTAGGGTTT+TGG | 0.345127 | 5.2:-15214058 | None:intergenic |
| ATCATCAATGTGGTTGGAAC+CGG | 0.347020 | 5.2:+15211848 | MS.gene65336:CDS |
| TAGTGGTAGTAGCACCTGTT+AGG | 0.348845 | 5.2:+15212430 | MS.gene65336:CDS |
| ACTAAACCAGACTCAATATA+TGG | 0.349812 | 5.2:-15212411 | None:intergenic |
| GTCGTTGTGTGCTACTTATA+TGG | 0.356677 | 5.2:+15213195 | MS.gene65336:CDS |
| TTTAGTGTTGCGAAGAATCT+TGG | 0.359196 | 5.2:+15211350 | MS.gene65336:CDS |
| AGTAGTTCACGCCAACACTA+TGG | 0.359304 | 5.2:+15211313 | MS.gene65336:CDS |
| AGTGCTCTAGCAGCTTCTTC+AGG | 0.368684 | 5.2:-15213425 | None:intergenic |
| GTCTAATCACTCTGGATTAT+CGG | 0.372751 | 5.2:+15211892 | MS.gene65336:CDS |
| AGCTCAGAAGCCTCGCGGTT+GGG | 0.374479 | 5.2:+15212003 | MS.gene65336:CDS |
| TGGTGTAAATGGAGCCAAAA+AGG | 0.374511 | 5.2:-15212475 | None:intergenic |
| GAAAATACAGTGAGCACATT+TGG | 0.377522 | 5.2:+15213173 | MS.gene65336:CDS |
| GCAGACCTTGTTGACTACTA+TGG | 0.377656 | 5.2:+15211104 | MS.gene65336:CDS |
| AAATGCTAGTCCCTGTGATT+TGG | 0.381125 | 5.2:+15211969 | MS.gene65336:CDS |
| CTTGAGAAGGGTCCTCAAAA+TGG | 0.382532 | 5.2:+15213446 | MS.gene65336:CDS |
| ACTCACGGAAATACCGATAA+TGG | 0.387132 | 5.2:+15211548 | MS.gene65336:CDS |
| CTTATAAGTTTATTCCATAT+GGG | 0.389021 | 5.2:+15212179 | MS.gene65336:CDS |
| CGGTGTAAATTTACTATTGT+AGG | 0.389253 | 5.2:+15213524 | MS.gene65336:CDS |
| CAGGAAGATTCTAAATATAG+AGG | 0.393980 | 5.2:+15210566 | MS.gene65336:CDS |
| CTTAATAGCCTTCCATTGTT+CGG | 0.398580 | 5.2:-15212031 | None:intergenic |
| AATGGAAGGCTATTAAGAAT+TGG | 0.401016 | 5.2:+15212037 | MS.gene65336:CDS |
| GATAACAAATGTGCTAGTTC+AGG | 0.402634 | 5.2:+15211265 | MS.gene65336:CDS |
| ACTCAGCCATATATTGAGTC+TGG | 0.404527 | 5.2:+15212405 | MS.gene65336:CDS |
| CTCTCCCTGAAGTTATTGCC+TGG | 0.405725 | 5.2:-15211944 | None:intergenic |
| CCAAACCAGGCAATAACTTC+AGG | 0.406252 | 5.2:+15211939 | MS.gene65336:CDS |
| ATAATCTTTATTGGAGATGA+TGG | 0.413687 | 5.2:-15214198 | None:intergenic |
| AGGAACGGAATTGGTGCATT+AGG | 0.414414 | 5.2:+15211170 | MS.gene65336:CDS |
| ACTCATCAATACCAATATCT+TGG | 0.416136 | 5.2:-15213379 | None:intergenic |
| TACAAAGGATTCATGACAAA+TGG | 0.421966 | 5.2:+15213853 | MS.gene65336:CDS |
| CGGACAAGCTCGGTGTTACT+AGG | 0.423128 | 5.2:-15212217 | None:intergenic |
| GGCTTCTCTTCAACTGTGGC+TGG | 0.425877 | 5.2:+15210383 | MS.gene65336:CDS |
| CATATGGAATAAACTTATAA+GGG | 0.429868 | 5.2:-15212177 | None:intergenic |
| TTTGCAAAATGGCAGTTGAT+AGG | 0.431842 | 5.2:-15213812 | None:intergenic |
| TGGCGGTAACTAACGCCTAT+TGG | 0.432370 | 5.2:-15212064 | None:intergenic |
| AATCATTTGAGAATGTGATT+TGG | 0.434174 | 5.2:-15211661 | None:intergenic |
| GTAATTGGCAAAGAACCAAT+TGG | 0.435302 | 5.2:+15213320 | MS.gene65336:CDS |
| GATCTGTGGATCAGCATGTT+TGG | 0.435879 | 5.2:+15213959 | MS.gene65336:CDS |
| GTATACATTGATGATGATAA+TGG | 0.436911 | 5.2:+15211146 | MS.gene65336:CDS |
| AACTTATAAGGGACAGCATA+AGG | 0.436939 | 5.2:-15212166 | None:intergenic |
| TGACAAGTTCTGATAAAGAA+TGG | 0.437045 | 5.2:-15211053 | None:intergenic |
| CTGGTACTTGCGAGACAAAT+TGG | 0.437291 | 5.2:-15212084 | None:intergenic |
| CGCGTGCTGTCAACACTCCT+TGG | 0.443293 | 5.2:-15211469 | None:intergenic |
| ATATATTGAGTCTGGTTTAG+TGG | 0.447740 | 5.2:+15212413 | MS.gene65336:CDS |
| TGCGGTCGACGATGTAAATT+CGG | 0.449520 | 5.2:+15210502 | MS.gene65336:CDS |
| AAGTCCAAGAGGGCCATTAT+CGG | 0.451799 | 5.2:-15211561 | None:intergenic |
| ATTGCTAATGGTGAGTCTCT+TGG | 0.452500 | 5.2:-15213786 | None:intergenic |
| CAATTTGTCTCGCAAGTACC+AGG | 0.453271 | 5.2:+15212085 | MS.gene65336:CDS |
| AAGGGACAGCATAAGGCAAT+AGG | 0.454426 | 5.2:-15212159 | None:intergenic |
| TCACAGCGATCTTTATCAAA+TGG | 0.455581 | 5.2:+15211073 | MS.gene65336:CDS |
| GGAGACAGAAACTAGTGCTT+TGG | 0.456942 | 5.2:+15212452 | MS.gene65336:CDS |
| AATCTTGGAATGATGGGAAC+TGG | 0.458661 | 5.2:+15211365 | MS.gene65336:CDS |
| GAACCTTGAGTGTAACCAAT+TGG | 0.458763 | 5.2:-15213335 | None:intergenic |
| CTGAAGAGAGAGCTTCAACT+TGG | 0.460309 | 5.2:-15210546 | None:intergenic |
| TTGTTCTTACCATCCCCATA+TGG | 0.461876 | 5.2:-15212193 | None:intergenic |
| TTAAGAATTGGAGTACCAAT+AGG | 0.462054 | 5.2:+15212049 | MS.gene65336:CDS |
| GGTCTCGGAAGATCGGTTAT+TGG | 0.463969 | 5.2:+15211870 | MS.gene65336:CDS |
| AATACCGATAATGGCCCTCT+TGG | 0.465354 | 5.2:+15211557 | MS.gene65336:CDS |
| AACCCTAGCTCAGGATCGTC+GGG | 0.470053 | 5.2:+15214062 | MS.gene65336:CDS |
| ACTGGTTCTGTTCCTAATTG+TGG | 0.470541 | 5.2:+15214245 | MS.gene65336:CDS |
| CTAGTCCCTGTGATTTGGCC+TGG | 0.471114 | 5.2:+15211974 | MS.gene65336:CDS |
| ACGCGTGCACACACCAGATT+CGG | 0.475897 | 5.2:+15211487 | MS.gene65336:CDS |
| CCAGGCACAGATACATTTCA+AGG | 0.476169 | 5.2:+15212103 | MS.gene65336:CDS |
| CTTGTCCGTCTGATAACAAC+TGG | 0.476371 | 5.2:+15212232 | MS.gene65336:CDS |
| ATGTGGTTGGAACCGGGTCT+CGG | 0.478551 | 5.2:+15211855 | MS.gene65336:CDS |
| TGCAAGGAAGATGTCGATAT+AGG | 0.479803 | 5.2:-15213498 | None:intergenic |
| GCAGTTGCTTCGGGTCTCAC+AGG | 0.488039 | 5.2:-15211236 | None:intergenic |
| GACAAGTTCTGATAAAGAAT+GGG | 0.488714 | 5.2:-15211052 | None:intergenic |
| GTAGTTCACGCCAACACTAT+GGG | 0.489805 | 5.2:+15211314 | MS.gene65336:CDS |
| ACATTGATGATTTCATATGT+AGG | 0.491964 | 5.2:-15211836 | None:intergenic |
| GGTCAAGAGTTCACCAGAAA+CGG | 0.492133 | 5.2:+15213545 | MS.gene65336:CDS |
| TGATGGGAACTGGTTATGTA+TGG | 0.493409 | 5.2:+15211375 | MS.gene65336:CDS |
| TGGGAATTGAAGTGAAGAAA+GGG | 0.497041 | 5.2:-15211033 | None:intergenic |
| CTCCATTTACACCAAGGATG+TGG | 0.498261 | 5.2:+15212484 | MS.gene65336:CDS |
| AGCTGCTAGAGCACTTGAGA+AGG | 0.498564 | 5.2:+15213433 | MS.gene65336:CDS |
| AAAGCTGAAAATGAGATAAG+AGG | 0.499953 | 5.2:-15211002 | None:intergenic |
| AAACCCGACGATCCTGAGCT+AGG | 0.500062 | 5.2:-15214065 | None:intergenic |
| GATAATGGAAGGAACGGAAT+TGG | 0.500398 | 5.2:+15211161 | MS.gene65336:CDS |
| TAAATTTACACCGGCTTGCA+AGG | 0.500407 | 5.2:-15213514 | None:intergenic |
| AATTCGGATCCAAATATTCT+CGG | 0.501823 | 5.2:+15210518 | MS.gene65336:CDS |
| GTGTTTCCAGGCCAAATCAC+AGG | 0.502009 | 5.2:-15211980 | None:intergenic |
| ATCTCTTATAGAGGTAGTGA+GGG | 0.507274 | 5.2:+15214164 | MS.gene65336:CDS |
| GTTGATAGGTCAATTGCTAA+TGG | 0.508345 | 5.2:-15213798 | None:intergenic |
| AAGAGTTCACCAGAAACGGC+TGG | 0.511076 | 5.2:+15213549 | MS.gene65336:CDS |
| AGTGGTAGTAGCACCTGTTA+GGG | 0.511309 | 5.2:+15212431 | MS.gene65336:CDS |
| CCTTGAAATGTATCTGTGCC+TGG | 0.511367 | 5.2:-15212103 | None:intergenic |
| CTCTACTAATATACTTCATA+CGG | 0.511636 | 5.2:+15213985 | MS.gene65336:CDS |
| TATGAAATCATCAATGTGGT+TGG | 0.513116 | 5.2:+15211842 | MS.gene65336:CDS |
| TGCGAAGAATCTTGGAATGA+TGG | 0.515559 | 5.2:+15211358 | MS.gene65336:CDS |
| ATGGGAATTGAAGTGAAGAA+AGG | 0.515929 | 5.2:-15211034 | None:intergenic |
| GTTAACATGACAGGTGTGAC+AGG | 0.520717 | 5.2:+15211776 | MS.gene65336:CDS |
| GGTTATTGGTCTAATCACTC+TGG | 0.537000 | 5.2:+15211884 | MS.gene65336:CDS |
| GAACCAGTTATGCGTGGAGA+TGG | 0.540357 | 5.2:-15214230 | None:intergenic |
| AGAGTTCACCAGAAACGGCT+GGG | 0.541125 | 5.2:+15213550 | MS.gene65336:CDS |
| GAACCAATTGGTTACACTCA+AGG | 0.542568 | 5.2:+15213332 | MS.gene65336:CDS |
| AACCCGACGATCCTGAGCTA+GGG | 0.542874 | 5.2:-15214064 | None:intergenic |
| CCTGACCAAAACCCTAGCTC+AGG | 0.544007 | 5.2:+15214053 | MS.gene65336:CDS |
| AAGTTTATTCCATATGGGGA+TGG | 0.544461 | 5.2:+15212184 | MS.gene65336:CDS |
| CAGGAATTTGACGGTGCAGT+AGG | 0.544564 | 5.2:+15212339 | MS.gene65336:intron |
| ATGGAGAGAATCTCTTATAG+AGG | 0.548030 | 5.2:+15214155 | MS.gene65336:CDS |
| CAAACCAGGCAATAACTTCA+GGG | 0.551751 | 5.2:+15211940 | MS.gene65336:CDS |
| AAACCCTAGCTCAGGATCGT+CGG | 0.552997 | 5.2:+15214061 | MS.gene65336:CDS |
| CAATGGCTTCTCTTCAACTG+TGG | 0.554201 | 5.2:+15210379 | MS.gene65336:CDS |
| GCTGCTAGAGCACTTGAGAA+GGG | 0.555149 | 5.2:+15213434 | MS.gene65336:CDS |
| TGGGGACTGTATGTGATCTG+TGG | 0.555651 | 5.2:+15213945 | MS.gene65336:CDS |
| AATCTCTTATAGAGGTAGTG+AGG | 0.556154 | 5.2:+15214163 | MS.gene65336:CDS |
| CAGCTCAGAAGCCTCGCGGT+TGG | 0.558518 | 5.2:+15212002 | MS.gene65336:CDS |
| ACCTTGTTGACTACTATGGA+TGG | 0.559074 | 5.2:+15211108 | MS.gene65336:CDS |
| TTATAAGTTTATTCCATATG+GGG | 0.559101 | 5.2:+15212180 | MS.gene65336:CDS |
| ATTTATGAAGTTAACATGAC+AGG | 0.559107 | 5.2:+15211767 | MS.gene65336:CDS |
| TGAGCTGTTACAGAACTATG+AGG | 0.559881 | 5.2:-15210945 | None:intergenic |
| TCATCAATGTGGTTGGAACC+GGG | 0.562645 | 5.2:+15211849 | MS.gene65336:CDS |
| TCCATTGCCATCTGATGCAA+TGG | 0.562987 | 5.2:+15211439 | MS.gene65336:CDS |
| GATGATGATAATGGAAGGAA+CGG | 0.567888 | 5.2:+15211155 | MS.gene65336:CDS |
| AGCTTTCAATGCCTTTAATG+GGG | 0.571429 | 5.2:-15213295 | None:intergenic |
| GCTGTGACAAACCACATCCT+TGG | 0.572660 | 5.2:-15212495 | None:intergenic |
| GATGCATTGAACATCTTCGA+TGG | 0.577411 | 5.2:+15211722 | MS.gene65336:CDS |
| ATATTGGTATTGATGAGTCT+AGG | 0.579574 | 5.2:+15213384 | MS.gene65336:CDS |
| TCGACATCTTCCTTGCAAGC+CGG | 0.580299 | 5.2:+15213504 | MS.gene65336:CDS |
| AATAGCAGAAAGAAAAGCAG+TGG | 0.580483 | 5.2:-15211402 | None:intergenic |
| GGAACCGGGTCTCGGAAGAT+CGG | 0.581902 | 5.2:+15211863 | MS.gene65336:CDS |
| ATATCATCCATTGCATCAGA+TGG | 0.582487 | 5.2:-15211446 | None:intergenic |
| CTGGCATTCATAATACATCA+AGG | 0.584689 | 5.2:+15210402 | MS.gene65336:CDS |
| GCGAAGAATCTTGGAATGAT+GGG | 0.585664 | 5.2:+15211359 | MS.gene65336:CDS |
| CAATAGCCAAACTTTAACCA+TGG | 0.590621 | 5.2:-15210339 | None:intergenic |
| AACAAATGTGCTAGTTCAGG+TGG | 0.591116 | 5.2:+15211268 | MS.gene65336:CDS |
| GCTCTAATGATTCTCTACAA+TGG | 0.591176 | 5.2:+15210362 | MS.gene65336:CDS |
| TCCATTGCATCAGATGGCAA+TGG | 0.602552 | 5.2:-15211440 | None:intergenic |
| AAATGGCAAAACTTGACTCA+CGG | 0.603058 | 5.2:+15211533 | MS.gene65336:CDS |
| AGTAGAGCTTGTTTAACACA+AGG | 0.608489 | 5.2:+15213882 | MS.gene65336:CDS |
| ATTGAAGTGAAGAAAGGGTA+GGG | 0.610945 | 5.2:-15211028 | None:intergenic |
| AGGGTGAATGATGAATTTAG+AGG | 0.611358 | 5.2:+15212564 | MS.gene65336:CDS |
| TGTTATCAGACGGACAAGCT+CGG | 0.614402 | 5.2:-15212227 | None:intergenic |
| GAGTTCACCAGAAACGGCTG+GGG | 0.618854 | 5.2:+15213551 | MS.gene65336:CDS |
| ATCTTTATTGGAGATGATGG+AGG | 0.618940 | 5.2:-15214195 | None:intergenic |
| AATTGAAGTGAAGAAAGGGT+AGG | 0.623429 | 5.2:-15211029 | None:intergenic |
| TCACACCAGTTGTTATCAGA+CGG | 0.627621 | 5.2:-15212237 | None:intergenic |
| GCTTTCAATGCCTTTAATGG+GGG | 0.630168 | 5.2:-15213294 | None:intergenic |
| TGTTTCCAGGCCAAATCACA+GGG | 0.630570 | 5.2:-15211979 | None:intergenic |
| CTACAATAGTAAATTTACAC+CGG | 0.630833 | 5.2:-15213523 | None:intergenic |
| ACATTGATGATGATAATGGA+AGG | 0.631961 | 5.2:+15211150 | MS.gene65336:CDS |
| TAGACAATGGGGACTTACAA+AGG | 0.633097 | 5.2:+15213838 | MS.gene65336:CDS |
| TCTTATAGAGGTAGTGAGGG+AGG | 0.636380 | 5.2:+15214167 | MS.gene65336:CDS |
| TTTCATATGTAGGATTAACA+AGG | 0.639032 | 5.2:-15211826 | None:intergenic |
| GTACTTGCGAGACAAATTGG+CGG | 0.642717 | 5.2:-15212081 | None:intergenic |
| ATAACCGATCTTCCGAGACC+CGG | 0.644726 | 5.2:-15211867 | None:intergenic |
| GCATTGAACATCTTCGATGG+AGG | 0.646368 | 5.2:+15211725 | MS.gene65336:CDS |
| TTGGAATGAATTGTTTCTGG+AGG | 0.646837 | 5.2:-15211920 | None:intergenic |
| TCCATCCATAGTAGTCAACA+AGG | 0.646917 | 5.2:-15211109 | None:intergenic |
| GATGCAATGGATGATATCCA+AGG | 0.647811 | 5.2:+15211452 | MS.gene65336:CDS |
| GAGCTGTTACAGAACTATGA+GGG | 0.647851 | 5.2:-15210944 | None:intergenic |
| GTATATCAAGCACCGCTCAG+AGG | 0.649063 | 5.2:+15214019 | MS.gene65336:CDS |
| ATGGAGGAAACACATTGCGT+AGG | 0.650471 | 5.2:+15211741 | MS.gene65336:CDS |
| TAGTTCACGCCAACACTATG+GGG | 0.654856 | 5.2:+15211315 | MS.gene65336:CDS |
| GAAACAATTCATTCCAAACC+AGG | 0.659152 | 5.2:+15211926 | MS.gene65336:CDS |
| GGAACAGAACCAGTTATGCG+TGG | 0.659697 | 5.2:-15214236 | None:intergenic |
| GAGACCCGAAGCAACTGCAG+AGG | 0.663454 | 5.2:+15211241 | MS.gene65336:CDS |
| TTTGCAAATGGTAGACAATG+GGG | 0.667655 | 5.2:+15213827 | MS.gene65336:CDS |
| TACATATGAAATCATCAATG+TGG | 0.671358 | 5.2:+15211838 | MS.gene65336:CDS |
| AGTTCACGCCAACACTATGG+GGG | 0.676435 | 5.2:+15211316 | MS.gene65336:CDS |
| GAGAAGGGTCCTCAAAATGG+CGG | 0.676519 | 5.2:+15213449 | MS.gene65336:CDS |
| AAGAAAGCTGTTGAACTGTG+AGG | 0.698394 | 5.2:-15213271 | None:intergenic |
| GGTCATGGCTAGACACAATG+TGG | 0.699792 | 5.2:+15210911 | MS.gene65336:CDS |
| GTTCACGCCAACACTATGGG+GGG | 0.717244 | 5.2:+15211317 | MS.gene65336:CDS |
| AACACAGCTCAGAAGCCTCG+CGG | 0.732843 | 5.2:+15211998 | MS.gene65336:CDS |
| TCAAAGTTATCTACACTACG+TGG | 0.734230 | 5.2:+15211683 | MS.gene65336:CDS |
| GAGAATCAAGTTCCTCTGAG+CGG | 0.762406 | 5.2:-15214031 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGTTTTGAATAAATTTATTT+TGG | - | chr5.2:15212941-15212960 | None:intergenic | 15.0% |
| !!! | TCACATTAATTCTTTTAAAT+TGG | - | chr5.2:15213628-15213647 | None:intergenic | 15.0% |
| !!! | TGGAATTTTATTAATTTCAT+GGG | + | chr5.2:15213676-15213695 | MS.gene65336:intron | 15.0% |
| !!! | TTTAAGTCAAATCTTTTTTA+TGG | - | chr5.2:15210776-15210795 | None:intergenic | 15.0% |
| !! | AACTATTTAATCCAAGATAT+TGG | + | chr5.2:15213368-15213387 | MS.gene65336:CDS | 20.0% |
| !! | CATATGGAATAAACTTATAA+GGG | - | chr5.2:15212180-15212199 | None:intergenic | 20.0% |
| !! | CTTATAAGTTTATTCCATAT+GGG | + | chr5.2:15212179-15212198 | MS.gene65336:CDS | 20.0% |
| !! | GTTTAAAAAAGGTTCAATAT+TGG | - | chr5.2:15212662-15212681 | None:intergenic | 20.0% |
| !! | TTAAAACTAAAATTCACGTT+TGG | - | chr5.2:15212847-15212866 | None:intergenic | 20.0% |
| !! | TTATAAGTTTATTCCATATG+GGG | + | chr5.2:15212180-15212199 | MS.gene65336:CDS | 20.0% |
| !!! | AAAGAAAGTTTGTTTCTAAA+TGG | + | chr5.2:15211516-15211535 | MS.gene65336:CDS | 20.0% |
| !!! | AAATCTTTTTTATGGTCTAA+CGG | - | chr5.2:15210768-15210787 | None:intergenic | 20.0% |
| !!! | AAATTGATTTTAACGTGTTT+AGG | + | chr5.2:15212762-15212781 | MS.gene65336:intron | 20.0% |
| !!! | AACAAATGGTTACTATTTTT+TGG | + | chr5.2:15212598-15212617 | MS.gene65336:CDS | 20.0% |
| !!! | ATAAGCGTAAATTTTTTACA+TGG | - | chr5.2:15210841-15210860 | None:intergenic | 20.0% |
| !!! | ATAGTAACCATTTGTTTTTT+AGG | - | chr5.2:15212594-15212613 | None:intergenic | 20.0% |
| !!! | ATCATGTCAATAATCTTTTA+TGG | + | chr5.2:15212262-15212281 | MS.gene65336:intron | 20.0% |
| !!! | CTGGAATTTTATTAATTTCA+TGG | + | chr5.2:15213675-15213694 | MS.gene65336:intron | 20.0% |
| !!! | TGATTTTTGAATTTTCATAC+AGG | + | chr5.2:15212320-15212339 | MS.gene65336:intron | 20.0% |
| !!! | TTGATGCATTTTTTAAACAA+GGG | + | chr5.2:15211636-15211655 | MS.gene65336:CDS | 20.0% |
| ! | AATCATTTGAGAATGTGATT+TGG | - | chr5.2:15211664-15211683 | None:intergenic | 25.0% |
| ! | AATGAAACTTGATTACTCAA+AGG | - | chr5.2:15213134-15213153 | None:intergenic | 25.0% |
| ! | ATAATCTTTATTGGAGATGA+TGG | - | chr5.2:15214201-15214220 | None:intergenic | 25.0% |
| ! | ATTTATGAAGTTAACATGAC+AGG | + | chr5.2:15211767-15211786 | MS.gene65336:CDS | 25.0% |
| ! | CCATATGGAATAAACTTATA+AGG | - | chr5.2:15212181-15212200 | None:intergenic | 25.0% |
| ! | CCTTATAAGTTTATTCCATA+TGG | + | chr5.2:15212178-15212197 | MS.gene65336:CDS | 25.0% |
| ! | CTACAATAGTAAATTTACAC+CGG | - | chr5.2:15213526-15213545 | None:intergenic | 25.0% |
| ! | CTCTACTAATATACTTCATA+CGG | + | chr5.2:15213985-15214004 | MS.gene65336:CDS | 25.0% |
| ! | TAACTTGAAGTTGAGATTAA+AGG | + | chr5.2:15212812-15212831 | MS.gene65336:intron | 25.0% |
| ! | TAATGCATGCAATATTTATG+TGG | + | chr5.2:15212696-15212715 | MS.gene65336:intron | 25.0% |
| ! | TACATATGAAATCATCAATG+TGG | + | chr5.2:15211838-15211857 | MS.gene65336:CDS | 25.0% |
| ! | TACTACAACAAGAACAAAAA+TGG | + | chr5.2:15212374-15212393 | MS.gene65336:CDS | 25.0% |
| ! | TTTCATATGTAGGATTAACA+AGG | - | chr5.2:15211829-15211848 | None:intergenic | 25.0% |
| !! | ACATTGATGATTTCATATGT+AGG | - | chr5.2:15211839-15211858 | None:intergenic | 25.0% |
| !! | ACTCAAACTAAAAAGCTTTT+GGG | + | chr5.2:15213926-15213945 | MS.gene65336:CDS | 25.0% |
| !! | ATTTTCATACAGGAATTTGA+CGG | + | chr5.2:15212330-15212349 | MS.gene65336:intron | 25.0% |
| !! | CAATAATCTTTTATGGAGTT+TGG | + | chr5.2:15212269-15212288 | MS.gene65336:intron | 25.0% |
| !! | TATGTAATATACAGTTTTGC+AGG | + | chr5.2:15210890-15210909 | MS.gene65336:intron | 25.0% |
| !! | TGAATAACAATTTTAGACTC+TGG | - | chr5.2:15213727-15213746 | None:intergenic | 25.0% |
| !! | TTTTCTTTCAATACTAGTGT+TGG | + | chr5.2:15210452-15210471 | MS.gene65336:CDS | 25.0% |
| !!! | CTTGATGCATTTTTTAAACA+AGG | + | chr5.2:15211635-15211654 | MS.gene65336:CDS | 25.0% |
| !!! | GTATACATTGATGATGATAA+TGG | + | chr5.2:15211146-15211165 | MS.gene65336:CDS | 25.0% |
| AAAGCTGAAAATGAGATAAG+AGG | - | chr5.2:15211005-15211024 | None:intergenic | 30.0% | |
| AAGCTTTCAATGCCTTTAAT+GGG | - | chr5.2:15213299-15213318 | None:intergenic | 30.0% | |
| AATGGAAGGCTATTAAGAAT+TGG | + | chr5.2:15212037-15212056 | MS.gene65336:CDS | 30.0% | |
| AATTCGGATCCAAATATTCT+CGG | + | chr5.2:15210518-15210537 | MS.gene65336:CDS | 30.0% | |
| ACAAAAAACTAAGTCCAAGA+GGG | - | chr5.2:15211574-15211593 | None:intergenic | 30.0% | |
| ACTAAACCAGACTCAATATA+TGG | - | chr5.2:15212414-15212433 | None:intergenic | 30.0% | |
| ACTCATCAATACCAATATCT+TGG | - | chr5.2:15213382-15213401 | None:intergenic | 30.0% | |
| AGGCCTGATATTGTAAATAT+TGG | + | chr5.2:15210422-15210441 | MS.gene65336:CDS | 30.0% | |
| ATAAAATTCCAGAATCATGC+TGG | - | chr5.2:15213667-15213686 | None:intergenic | 30.0% | |
| ATGTCATAGAAGACAAGAAT+TGG | - | chr5.2:15213088-15213107 | None:intergenic | 30.0% | |
| ATTGCATGCATTATTAGCAT+TGG | - | chr5.2:15212689-15212708 | None:intergenic | 30.0% | |
| ATTGTCTACCATTTGCAAAA+TGG | - | chr5.2:15213826-15213845 | None:intergenic | 30.0% | |
| CAGGAAGATTCTAAATATAG+AGG | + | chr5.2:15210566-15210585 | MS.gene65336:CDS | 30.0% | |
| CGGTGTAAATTTACTATTGT+AGG | + | chr5.2:15213524-15213543 | MS.gene65336:CDS | 30.0% | |
| CTGAGCATCATAATCTTTAT+TGG | - | chr5.2:15214210-15214229 | None:intergenic | 30.0% | |
| CTTGTCTTCTATGACATATA+TGG | + | chr5.2:15213091-15213110 | MS.gene65336:intron | 30.0% | |
| GCAATTTCTTGCAACAAAAT+TGG | + | chr5.2:15213602-15213621 | MS.gene65336:intron | 30.0% | |
| GCTCCAATATTTACAATATC+AGG | - | chr5.2:15210428-15210447 | None:intergenic | 30.0% | |
| TAAGCTTTCAATGCCTTTAA+TGG | - | chr5.2:15213300-15213319 | None:intergenic | 30.0% | |
| TACAAAGGATTCATGACAAA+TGG | + | chr5.2:15213853-15213872 | MS.gene65336:CDS | 30.0% | |
| TACAACAAGAACAAAAATGG+TGG | + | chr5.2:15212377-15212396 | MS.gene65336:CDS | 30.0% | |
| TATGAAATCATCAATGTGGT+TGG | + | chr5.2:15211842-15211861 | MS.gene65336:CDS | 30.0% | |
| TATTAGTTGGAACTGTAGTT+TGG | + | chr5.2:15212529-15212548 | MS.gene65336:CDS | 30.0% | |
| TCAAACACACACTAATATCA+AGG | + | chr5.2:15212981-15213000 | MS.gene65336:intron | 30.0% | |
| TTGTTTGTGTTGTATTTGAC+AGG | + | chr5.2:15213024-15213043 | MS.gene65336:intron | 30.0% | |
| ! | ATATATTGAGTCTGGTTTAG+TGG | + | chr5.2:15212413-15212432 | MS.gene65336:CDS | 30.0% |
| ! | ATTTTATCCACACTATGTAG+GGG | + | chr5.2:15213151-15213170 | MS.gene65336:intron | 30.0% |
| ! | ATTTTGCAAATGGTAGACAA+TGG | + | chr5.2:15213825-15213844 | MS.gene65336:CDS | 30.0% |
| ! | CATTTTATCCACACTATGTA+GGG | + | chr5.2:15213150-15213169 | MS.gene65336:intron | 30.0% |
| ! | CCATTTTCTTTCTCTTTGAT+CGG | - | chr5.2:15214139-15214158 | None:intergenic | 30.0% |
| ! | CTCAAACTAAAAAGCTTTTG+GGG | + | chr5.2:15213927-15213946 | MS.gene65336:CDS | 30.0% |
| ! | GACAAGTTCTGATAAAGAAT+GGG | - | chr5.2:15211055-15211074 | None:intergenic | 30.0% |
| ! | GACTCAAACTAAAAAGCTTT+TGG | + | chr5.2:15213925-15213944 | MS.gene65336:CDS | 30.0% |
| ! | TCATTTTATCCACACTATGT+AGG | + | chr5.2:15213149-15213168 | MS.gene65336:intron | 30.0% |
| ! | TGACAAGTTCTGATAAAGAA+TGG | - | chr5.2:15211056-15211075 | None:intergenic | 30.0% |
| ! | TTAAGAATTGGAGTACCAAT+AGG | + | chr5.2:15212049-15212068 | MS.gene65336:CDS | 30.0% |
| ! | TTTTGCAAATGGTAGACAAT+GGG | + | chr5.2:15213826-15213845 | MS.gene65336:CDS | 30.0% |
| !! | AAAAATTGCTTTAGAAGCTG+CGG | + | chr5.2:15210484-15210503 | MS.gene65336:CDS | 30.0% |
| !! | ACATTGATGATGATAATGGA+AGG | + | chr5.2:15211150-15211169 | MS.gene65336:CDS | 30.0% |
| !! | ATATTGGTATTGATGAGTCT+AGG | + | chr5.2:15213384-15213403 | MS.gene65336:CDS | 30.0% |
| !! | ATGCATTATTAGCATTGGTT+TGG | - | chr5.2:15212684-15212703 | None:intergenic | 30.0% |
| !! | GCATTGGTTTGGTTTAAAAA+AGG | - | chr5.2:15212673-15212692 | None:intergenic | 30.0% |
| !! | GCTCTCTTTTTCATATTAGT+TGG | + | chr5.2:15212516-15212535 | MS.gene65336:CDS | 30.0% |
| !! | GGAGTTTGGATGTTTTATTA+TGG | + | chr5.2:15212283-15212302 | MS.gene65336:intron | 30.0% |
| !!! | GTAACCATTTGTTTTTTAGG+TGG | - | chr5.2:15212591-15212610 | None:intergenic | 30.0% |
| AAATGGCAAAACTTGACTCA+CGG | + | chr5.2:15211533-15211552 | MS.gene65336:CDS | 35.0% | |
| AACTTATAAGGGACAGCATA+AGG | - | chr5.2:15212169-15212188 | None:intergenic | 35.0% | |
| AAGTTTATTCCATATGGGGA+TGG | + | chr5.2:15212184-15212203 | MS.gene65336:CDS | 35.0% | |
| AATAGCAGAAAGAAAAGCAG+TGG | - | chr5.2:15211405-15211424 | None:intergenic | 35.0% | |
| AATCTCTTATAGAGGTAGTG+AGG | + | chr5.2:15214163-15214182 | MS.gene65336:CDS | 35.0% | |
| AATTGAAGTGAAGAAAGGGT+AGG | - | chr5.2:15211032-15211051 | None:intergenic | 35.0% | |
| ACTTGTTCACTTCCACAATT+AGG | - | chr5.2:15214260-15214279 | None:intergenic | 35.0% | |
| AGACACAATGTGGCAATAAT+TGG | + | chr5.2:15210921-15210940 | MS.gene65336:CDS | 35.0% | |
| AGCTTTCAATGCCTTTAATG+GGG | - | chr5.2:15213298-15213317 | None:intergenic | 35.0% | |
| AGGACCACCTAAAAAACAAA+TGG | + | chr5.2:15212584-15212603 | MS.gene65336:CDS | 35.0% | |
| AGGGTGAATGATGAATTTAG+AGG | + | chr5.2:15212564-15212583 | MS.gene65336:CDS | 35.0% | |
| AGGTTCATCAACTCATGAAA+AGG | - | chr5.2:15210633-15210652 | None:intergenic | 35.0% | |
| ATATCATCCATTGCATCAGA+TGG | - | chr5.2:15211449-15211468 | None:intergenic | 35.0% | |
| ATCTCTTATAGAGGTAGTGA+GGG | + | chr5.2:15214164-15214183 | MS.gene65336:CDS | 35.0% | |
| ATGGAGAGAATCTCTTATAG+AGG | + | chr5.2:15214155-15214174 | MS.gene65336:CDS | 35.0% | |
| ATGGGAATTGAAGTGAAGAA+AGG | - | chr5.2:15211037-15211056 | None:intergenic | 35.0% | |
| ATTCTACAACAAGCGGAAAT+TGG | - | chr5.2:15212962-15212981 | None:intergenic | 35.0% | |
| ATTGAAGTGAAGAAAGGGTA+GGG | - | chr5.2:15211031-15211050 | None:intergenic | 35.0% | |
| CCGATCAAAGAGAAAGAAAA+TGG | + | chr5.2:15214136-15214155 | MS.gene65336:CDS | 35.0% | |
| CTGGCATTCATAATACATCA+AGG | + | chr5.2:15210402-15210421 | MS.gene65336:CDS | 35.0% | |
| CTTAATAGCCTTCCATTGTT+CGG | - | chr5.2:15212034-15212053 | None:intergenic | 35.0% | |
| GAAAATACAGTGAGCACATT+TGG | + | chr5.2:15213173-15213192 | MS.gene65336:CDS | 35.0% | |
| GAAACAATTCATTCCAAACC+AGG | + | chr5.2:15211926-15211945 | MS.gene65336:CDS | 35.0% | |
| GACAAAAAACTAAGTCCAAG+AGG | - | chr5.2:15211575-15211594 | None:intergenic | 35.0% | |
| GATAACAAATGTGCTAGTTC+AGG | + | chr5.2:15211265-15211284 | MS.gene65336:CDS | 35.0% | |
| GCTCTAATGATTCTCTACAA+TGG | + | chr5.2:15210362-15210381 | MS.gene65336:CDS | 35.0% | |
| GGTTCATCAACTCATGAAAA+GGG | - | chr5.2:15210632-15210651 | None:intergenic | 35.0% | |
| GTAATTGGCAAAGAACCAAT+TGG | + | chr5.2:15213320-15213339 | MS.gene65336:CDS | 35.0% | |
| GTCTAATCACTCTGGATTAT+CGG | + | chr5.2:15211892-15211911 | MS.gene65336:CDS | 35.0% | |
| GTGTTTGATTCTACAACAAG+CGG | - | chr5.2:15212969-15212988 | None:intergenic | 35.0% | |
| TCAAAGTTATCTACACTACG+TGG | + | chr5.2:15211683-15211702 | MS.gene65336:CDS | 35.0% | |
| TCACAGCGATCTTTATCAAA+TGG | + | chr5.2:15211073-15211092 | MS.gene65336:CDS | 35.0% | |
| TGCATGCAATATTTATGTGG+AGG | + | chr5.2:15212699-15212718 | MS.gene65336:intron | 35.0% | |
| TGGGAATTGAAGTGAAGAAA+GGG | - | chr5.2:15211036-15211055 | None:intergenic | 35.0% | |
| TTCGCAACACTAAACACTTT+CGG | - | chr5.2:15211344-15211363 | None:intergenic | 35.0% | |
| TTGTAGGACTTCAGAGAATT+TGG | - | chr5.2:15213702-15213721 | None:intergenic | 35.0% | |
| TTTAGTGTTGCGAAGAATCT+TGG | + | chr5.2:15211350-15211369 | MS.gene65336:CDS | 35.0% | |
| TTTGCAAAATGGCAGTTGAT+AGG | - | chr5.2:15213815-15213834 | None:intergenic | 35.0% | |
| TTTGCAAATGGTAGACAATG+GGG | + | chr5.2:15213827-15213846 | MS.gene65336:CDS | 35.0% | |
| ! | AGTAGAGCTTGTTTAACACA+AGG | + | chr5.2:15213882-15213901 | MS.gene65336:CDS | 35.0% |
| ! | ATATACAGTTTTGCAGGTCA+TGG | + | chr5.2:15210896-15210915 | MS.gene65336:intron | 35.0% |
| ! | ATCTTTATTGGAGATGATGG+AGG | - | chr5.2:15214198-15214217 | None:intergenic | 35.0% |
| ! | ATTTTAGACTCTGGCATTGT+AGG | - | chr5.2:15213718-15213737 | None:intergenic | 35.0% |
| ! | GGCATTGAAAGCTTAGTAAT+TGG | + | chr5.2:15213305-15213324 | MS.gene65336:CDS | 35.0% |
| ! | GGTTTGGAATGAATTGTTTC+TGG | - | chr5.2:15211926-15211945 | None:intergenic | 35.0% |
| ! | GTTCTTAATTGTGCTGTTCA+GGG | + | chr5.2:15213759-15213778 | MS.gene65336:intron | 35.0% |
| ! | GTTGATAGGTCAATTGCTAA+TGG | - | chr5.2:15213801-15213820 | None:intergenic | 35.0% |
| ! | TGGAACTGTAGTTTGGATTT+TGG | + | chr5.2:15212536-15212555 | MS.gene65336:CDS | 35.0% |
| ! | TGTTCTTAATTGTGCTGTTC+AGG | + | chr5.2:15213758-15213777 | MS.gene65336:intron | 35.0% |
| ! | TTTCTTTTAAGCTCCGAATC+TGG | - | chr5.2:15211503-15211522 | None:intergenic | 35.0% |
| ! | TTTTAGTACCAGCATGATTC+TGG | + | chr5.2:15213656-15213675 | MS.gene65336:intron | 35.0% |
| !! | CTCTTCTTTTTCATCTGCAA+AGG | - | chr5.2:15214105-15214124 | None:intergenic | 35.0% |
| !! | GATGATGATAATGGAAGGAA+CGG | + | chr5.2:15211155-15211174 | MS.gene65336:CDS | 35.0% |
| !! | TTGGAATGAATTGTTTCTGG+AGG | - | chr5.2:15211923-15211942 | None:intergenic | 35.0% |
| !!! | AGTTTGGATTTTGGAGCATA+GGG | + | chr5.2:15212545-15212564 | MS.gene65336:CDS | 35.0% |
| !!! | ATCAACTGCCATTTTGCAAA+TGG | + | chr5.2:15213815-15213834 | MS.gene65336:CDS | 35.0% |
| !!! | TAGTTTGGATTTTGGAGCAT+AGG | + | chr5.2:15212544-15212563 | MS.gene65336:CDS | 35.0% |
| AAATGCTAGTCCCTGTGATT+TGG | + | chr5.2:15211969-15211988 | MS.gene65336:CDS | 40.0% | |
| AACAAATGTGCTAGTTCAGG+TGG | + | chr5.2:15211268-15211287 | MS.gene65336:CDS | 40.0% | |
| AAGAAAGCTGTTGAACTGTG+AGG | - | chr5.2:15213274-15213293 | None:intergenic | 40.0% | |
| ACTCACGGAAATACCGATAA+TGG | + | chr5.2:15211548-15211567 | MS.gene65336:CDS | 40.0% | |
| ACTCAGCCATATATTGAGTC+TGG | + | chr5.2:15212405-15212424 | MS.gene65336:CDS | 40.0% | |
| ATATTGGTGAGCCATGGAAA+AGG | - | chr5.2:15212646-15212665 | None:intergenic | 40.0% | |
| ATCATCAATGTGGTTGGAAC+CGG | + | chr5.2:15211848-15211867 | MS.gene65336:CDS | 40.0% | |
| ATTGCTAATGGTGAGTCTCT+TGG | - | chr5.2:15213789-15213808 | None:intergenic | 40.0% | |
| CAAACCAGGCAATAACTTCA+GGG | + | chr5.2:15211940-15211959 | MS.gene65336:CDS | 40.0% | |
| GAACCAATTGGTTACACTCA+AGG | + | chr5.2:15213332-15213351 | MS.gene65336:CDS | 40.0% | |
| GAACCTTGAGTGTAACCAAT+TGG | - | chr5.2:15213338-15213357 | None:intergenic | 40.0% | |
| GAGCTGTTACAGAACTATGA+GGG | - | chr5.2:15210947-15210966 | None:intergenic | 40.0% | |
| GATGCAATGGATGATATCCA+AGG | + | chr5.2:15211452-15211471 | MS.gene65336:CDS | 40.0% | |
| GATGCATTGAACATCTTCGA+TGG | + | chr5.2:15211722-15211741 | MS.gene65336:CDS | 40.0% | |
| GCGAAGAATCTTGGAATGAT+GGG | + | chr5.2:15211359-15211378 | MS.gene65336:CDS | 40.0% | |
| GCTTTCAATGCCTTTAATGG+GGG | - | chr5.2:15213297-15213316 | None:intergenic | 40.0% | |
| TAGACAATGGGGACTTACAA+AGG | + | chr5.2:15213838-15213857 | MS.gene65336:CDS | 40.0% | |
| TATTGGTGAGCCATGGAAAA+GGG | - | chr5.2:15212645-15212664 | None:intergenic | 40.0% | |
| TCACACCAGTTGTTATCAGA+CGG | - | chr5.2:15212240-15212259 | None:intergenic | 40.0% | |
| TCCATCCATAGTAGTCAACA+AGG | - | chr5.2:15211112-15211131 | None:intergenic | 40.0% | |
| TCGCAACACTAAACACTTTC+GGG | - | chr5.2:15211343-15211362 | None:intergenic | 40.0% | |
| TGAGCTGTTACAGAACTATG+AGG | - | chr5.2:15210948-15210967 | None:intergenic | 40.0% | |
| TGATGGGAACTGGTTATGTA+TGG | + | chr5.2:15211375-15211394 | MS.gene65336:CDS | 40.0% | |
| TGCAAGGAAGATGTCGATAT+AGG | - | chr5.2:15213501-15213520 | None:intergenic | 40.0% | |
| TGCAATTCTGTGAGAGGAAA+AGG | + | chr5.2:15212723-15212742 | MS.gene65336:intron | 40.0% | |
| TGCGAAGAATCTTGGAATGA+TGG | + | chr5.2:15211358-15211377 | MS.gene65336:CDS | 40.0% | |
| TGGTGTAAATGGAGCCAAAA+AGG | - | chr5.2:15212478-15212497 | None:intergenic | 40.0% | |
| TTGTTCTTACCATCCCCATA+TGG | - | chr5.2:15212196-15212215 | None:intergenic | 40.0% | |
| ! | AACCACATCCTTGGTGTAAA+TGG | - | chr5.2:15212489-15212508 | None:intergenic | 40.0% |
| ! | AATCTTGGAATGATGGGAAC+TGG | + | chr5.2:15211365-15211384 | MS.gene65336:CDS | 40.0% |
| ! | ACCTTGTTGACTACTATGGA+TGG | + | chr5.2:15211108-15211127 | MS.gene65336:CDS | 40.0% |
| ! | GGTTATTGGTCTAATCACTC+TGG | + | chr5.2:15211884-15211903 | MS.gene65336:CDS | 40.0% |
| ! | GTATTTTCCCCTACATAGTG+TGG | - | chr5.2:15213161-15213180 | None:intergenic | 40.0% |
| ! | TATTATCTCCCCCTTTTCCA+TGG | + | chr5.2:15212632-15212651 | MS.gene65336:intron | 40.0% |
| !! | AACTAGTGCTTTGGCCTTTT+TGG | + | chr5.2:15212461-15212480 | MS.gene65336:CDS | 40.0% |
| !! | ACTGGTTCTGTTCCTAATTG+TGG | + | chr5.2:15214245-15214264 | MS.gene65336:CDS | 40.0% |
| !! | AGGTTTTCTAAGCATTGCTG+AGG | + | chr5.2:15210586-15210605 | MS.gene65336:CDS | 40.0% |
| !! | GATAATGGAAGGAACGGAAT+TGG | + | chr5.2:15211161-15211180 | MS.gene65336:CDS | 40.0% |
| !! | GGTTTTCTAAGCATTGCTGA+GGG | + | chr5.2:15210587-15210606 | MS.gene65336:CDS | 40.0% |
| !! | GTCGTTGTGTGCTACTTATA+TGG | + | chr5.2:15213195-15213214 | MS.gene65336:CDS | 40.0% |
| !! | TAAATTTACACCGGCTTGCA+AGG | - | chr5.2:15213517-15213536 | None:intergenic | 40.0% |
| !! | TTGGTCTTGCCGAGAATATT+TGG | - | chr5.2:15210530-15210549 | None:intergenic | 40.0% |
| !!! | TTTTGGCTCCATTTACACCA+AGG | + | chr5.2:15212478-15212497 | MS.gene65336:CDS | 40.0% |
| AAGGGACAGCATAAGGCAAT+AGG | - | chr5.2:15212162-15212181 | None:intergenic | 45.0% | |
| AAGTCCAAGAGGGCCATTAT+CGG | - | chr5.2:15211564-15211583 | None:intergenic | 45.0% | |
| AGGAACGGAATTGGTGCATT+AGG | + | chr5.2:15211170-15211189 | MS.gene65336:CDS | 45.0% | |
| AGTAGTTCACGCCAACACTA+TGG | + | chr5.2:15211313-15211332 | MS.gene65336:CDS | 45.0% | |
| AGTGGTAGTAGCACCTGTTA+GGG | + | chr5.2:15212431-15212450 | MS.gene65336:CDS | 45.0% | |
| ATGGAGGAAACACATTGCGT+AGG | + | chr5.2:15211741-15211760 | MS.gene65336:CDS | 45.0% | |
| ATTGGTGAGCCATGGAAAAG+GGG | - | chr5.2:15212644-15212663 | None:intergenic | 45.0% | |
| CAATGGCTTCTCTTCAACTG+TGG | + | chr5.2:15210379-15210398 | MS.gene65336:CDS | 45.0% | |
| CAATTTGTCTCGCAAGTACC+AGG | + | chr5.2:15212085-15212104 | MS.gene65336:CDS | 45.0% | |
| CAGCTTTCTTCCCCCATTAA+AGG | + | chr5.2:15213284-15213303 | MS.gene65336:CDS | 45.0% | |
| CCAAACCAGGCAATAACTTC+AGG | + | chr5.2:15211939-15211958 | MS.gene65336:CDS | 45.0% | |
| CCAGGCACAGATACATTTCA+AGG | + | chr5.2:15212103-15212122 | MS.gene65336:CDS | 45.0% | |
| CCTGAAGTTATTGCCTGGTT+TGG | - | chr5.2:15211942-15211961 | None:intergenic | 45.0% | |
| CCTTGAAATGTATCTGTGCC+TGG | - | chr5.2:15212106-15212125 | None:intergenic | 45.0% | |
| CTAGTTTCTGTCTCCCTAAC+AGG | - | chr5.2:15212447-15212466 | None:intergenic | 45.0% | |
| CTCCATTTACACCAAGGATG+TGG | + | chr5.2:15212484-15212503 | MS.gene65336:CDS | 45.0% | |
| CTGAAGAGAGAGCTTCAACT+TGG | - | chr5.2:15210549-15210568 | None:intergenic | 45.0% | |
| CTGGTACTTGCGAGACAAAT+TGG | - | chr5.2:15212087-15212106 | None:intergenic | 45.0% | |
| CTTGAGAAGGGTCCTCAAAA+TGG | + | chr5.2:15213446-15213465 | MS.gene65336:CDS | 45.0% | |
| CTTGTCCGTCTGATAACAAC+TGG | + | chr5.2:15212232-15212251 | MS.gene65336:CDS | 45.0% | |
| GAGAATCAAGTTCCTCTGAG+CGG | - | chr5.2:15214034-15214053 | None:intergenic | 45.0% | |
| GATCTGTGGATCAGCATGTT+TGG | + | chr5.2:15213959-15213978 | MS.gene65336:CDS | 45.0% | |
| GCATTGAACATCTTCGATGG+AGG | + | chr5.2:15211725-15211744 | MS.gene65336:CDS | 45.0% | |
| GGAGACAGAAACTAGTGCTT+TGG | + | chr5.2:15212452-15212471 | MS.gene65336:CDS | 45.0% | |
| GGTCAAGAGTTCACCAGAAA+CGG | + | chr5.2:15213545-15213564 | MS.gene65336:CDS | 45.0% | |
| GGTTCAATATTGGTGAGCCA+TGG | - | chr5.2:15212652-15212671 | None:intergenic | 45.0% | |
| GTACTTGCGAGACAAATTGG+CGG | - | chr5.2:15212084-15212103 | None:intergenic | 45.0% | |
| GTAGTTCACGCCAACACTAT+GGG | + | chr5.2:15211314-15211333 | MS.gene65336:CDS | 45.0% | |
| GTTAACATGACAGGTGTGAC+AGG | + | chr5.2:15211776-15211795 | MS.gene65336:CDS | 45.0% | |
| TAGTGGTAGTAGCACCTGTT+AGG | + | chr5.2:15212430-15212449 | MS.gene65336:CDS | 45.0% | |
| TAGTTCACGCCAACACTATG+GGG | + | chr5.2:15211315-15211334 | MS.gene65336:CDS | 45.0% | |
| TATCTCCTCTGCAGTTGCTT+CGG | - | chr5.2:15211249-15211268 | None:intergenic | 45.0% | |
| TCATCAATGTGGTTGGAACC+GGG | + | chr5.2:15211849-15211868 | MS.gene65336:CDS | 45.0% | |
| TCCATTGCATCAGATGGCAA+TGG | - | chr5.2:15211443-15211462 | None:intergenic | 45.0% | |
| TCCATTGCCATCTGATGCAA+TGG | + | chr5.2:15211439-15211458 | MS.gene65336:CDS | 45.0% | |
| TCTTATAGAGGTAGTGAGGG+AGG | + | chr5.2:15214167-15214186 | MS.gene65336:CDS | 45.0% | |
| TGAGATTCTGCAACGCTTCT+CGG | - | chr5.2:15211207-15211226 | None:intergenic | 45.0% | |
| TGCGGTCGACGATGTAAATT+CGG | + | chr5.2:15210502-15210521 | MS.gene65336:CDS | 45.0% | |
| TGTTATCAGACGGACAAGCT+CGG | - | chr5.2:15212230-15212249 | None:intergenic | 45.0% | |
| TGTTTCCAGGCCAAATCACA+GGG | - | chr5.2:15211982-15212001 | None:intergenic | 45.0% | |
| ! | AATACCGATAATGGCCCTCT+TGG | + | chr5.2:15211557-15211576 | MS.gene65336:CDS | 45.0% |
| ! | CAAGTTGAAGCTCTCTCTTC+AGG | + | chr5.2:15210547-15210566 | MS.gene65336:CDS | 45.0% |
| ! | GCAGACCTTGTTGACTACTA+TGG | + | chr5.2:15211104-15211123 | MS.gene65336:CDS | 45.0% |
| ! | GGGTTTTTCCGAACAATGGA+AGG | + | chr5.2:15212023-15212042 | MS.gene65336:CDS | 45.0% |
| ! | GGTTGGGTTTTTCCGAACAA+TGG | + | chr5.2:15212019-15212038 | MS.gene65336:CDS | 45.0% |
| !! | AAAAAAATAAAAAATTTACA+AGG | - | chr5.2:15210653-15210672 | None:intergenic | 5.0% |
| !!! | TTGTAAATTTTTTATTTTTT+TGG | + | chr5.2:15210652-15210671 | MS.gene65336:intron | 5.0% |
| AAACCCTAGCTCAGGATCGT+CGG | + | chr5.2:15214061-15214080 | MS.gene65336:CDS | 50.0% | |
| AAGAGTTCACCAGAAACGGC+TGG | + | chr5.2:15213549-15213568 | MS.gene65336:CDS | 50.0% | |
| AGAGTTCACCAGAAACGGCT+GGG | + | chr5.2:15213550-15213569 | MS.gene65336:CDS | 50.0% | |
| AGTGCTCTAGCAGCTTCTTC+AGG | - | chr5.2:15213428-15213447 | None:intergenic | 50.0% | |
| AGTTCACGCCAACACTATGG+GGG | + | chr5.2:15211316-15211335 | MS.gene65336:CDS | 50.0% | |
| ATAACCGATCTTCCGAGACC+CGG | - | chr5.2:15211870-15211889 | None:intergenic | 50.0% | |
| ATCTCCTCTGCAGTTGCTTC+GGG | - | chr5.2:15211248-15211267 | None:intergenic | 50.0% | |
| CAGGAATTTGACGGTGCAGT+AGG | + | chr5.2:15212339-15212358 | MS.gene65336:intron | 50.0% | |
| CTCTCCCTGAAGTTATTGCC+TGG | - | chr5.2:15211947-15211966 | None:intergenic | 50.0% | |
| GAACCAGTTATGCGTGGAGA+TGG | - | chr5.2:15214233-15214252 | None:intergenic | 50.0% | |
| GAGAAGGGTCCTCAAAATGG+CGG | + | chr5.2:15213449-15213468 | MS.gene65336:CDS | 50.0% | |
| GCTGTGACAAACCACATCCT+TGG | - | chr5.2:15212498-15212517 | None:intergenic | 50.0% | |
| GGAACAGAACCAGTTATGCG+TGG | - | chr5.2:15214239-15214258 | None:intergenic | 50.0% | |
| GGTCATGGCTAGACACAATG+TGG | + | chr5.2:15210911-15210930 | MS.gene65336:CDS | 50.0% | |
| GGTCTCGGAAGATCGGTTAT+TGG | + | chr5.2:15211870-15211889 | MS.gene65336:CDS | 50.0% | |
| GTGTTTCCAGGCCAAATCAC+AGG | - | chr5.2:15211983-15212002 | None:intergenic | 50.0% | |
| TACAAATCCCCAGCCGTTTC+TGG | - | chr5.2:15213561-15213580 | None:intergenic | 50.0% | |
| TCGACATCTTCCTTGCAAGC+CGG | + | chr5.2:15213504-15213523 | MS.gene65336:CDS | 50.0% | |
| TGGCGGTAACTAACGCCTAT+TGG | - | chr5.2:15212067-15212086 | None:intergenic | 50.0% | |
| TGGGGACTGTATGTGATCTG+TGG | + | chr5.2:15213945-15213964 | MS.gene65336:CDS | 50.0% | |
| TTGGTGAGCCATGGAAAAGG+GGG | - | chr5.2:15212643-15212662 | None:intergenic | 50.0% | |
| ! | ACGATCCTGAGCTAGGGTTT+TGG | - | chr5.2:15214061-15214080 | None:intergenic | 50.0% |
| ! | AGCTGCTAGAGCACTTGAGA+AGG | + | chr5.2:15213433-15213452 | MS.gene65336:CDS | 50.0% |
| ! | GCTGCTAGAGCACTTGAGAA+GGG | + | chr5.2:15213434-15213453 | MS.gene65336:CDS | 50.0% |
| ! | GTATATCAAGCACCGCTCAG+AGG | + | chr5.2:15214019-15214038 | MS.gene65336:CDS | 50.0% |
| AAACCCGACGATCCTGAGCT+AGG | - | chr5.2:15214068-15214087 | None:intergenic | 55.0% | |
| AACACAGCTCAGAAGCCTCG+CGG | + | chr5.2:15211998-15212017 | MS.gene65336:CDS | 55.0% | |
| AACCCGACGATCCTGAGCTA+GGG | - | chr5.2:15214067-15214086 | None:intergenic | 55.0% | |
| AACCCTAGCTCAGGATCGTC+GGG | + | chr5.2:15214062-15214081 | MS.gene65336:CDS | 55.0% | |
| ACGCGTGCACACACCAGATT+CGG | + | chr5.2:15211487-15211506 | MS.gene65336:CDS | 55.0% | |
| ATGTGGTTGGAACCGGGTCT+CGG | + | chr5.2:15211855-15211874 | MS.gene65336:CDS | 55.0% | |
| CAGCCATCTCCACGCATAAC+TGG | + | chr5.2:15214227-15214246 | MS.gene65336:CDS | 55.0% | |
| CCTGACCAAAACCCTAGCTC+AGG | + | chr5.2:15214053-15214072 | MS.gene65336:CDS | 55.0% | |
| GAGTTCACCAGAAACGGCTG+GGG | + | chr5.2:15213551-15213570 | MS.gene65336:CDS | 55.0% | |
| GGAGGCTGCAATTCTGTGAG+AGG | + | chr5.2:15212717-15212736 | MS.gene65336:intron | 55.0% | |
| GGCTTCTCTTCAACTGTGGC+TGG | + | chr5.2:15210383-15210402 | MS.gene65336:CDS | 55.0% | |
| GGCTTCTGAGCTGTGTTTCC+AGG | - | chr5.2:15211995-15212014 | None:intergenic | 55.0% | |
| GTTCACGCCAACACTATGGG+GGG | + | chr5.2:15211317-15211336 | MS.gene65336:CDS | 55.0% | |
| TTCGGAAAAACCCAACCGCG+AGG | - | chr5.2:15212016-15212035 | None:intergenic | 55.0% | |
| ! | CTAGTCCCTGTGATTTGGCC+TGG | + | chr5.2:15211974-15211993 | MS.gene65336:CDS | 55.0% |
| !! | CCTGAGCTAGGGTTTTGGTC+AGG | - | chr5.2:15214056-15214075 | None:intergenic | 55.0% |
| !! | CGGACAAGCTCGGTGTTACT+AGG | - | chr5.2:15212220-15212239 | None:intergenic | 55.0% |
| AGCTCAGAAGCCTCGCGGTT+GGG | + | chr5.2:15212003-15212022 | MS.gene65336:CDS | 60.0% | |
| CGCGTGCTGTCAACACTCCT+TGG | - | chr5.2:15211472-15211491 | None:intergenic | 60.0% | |
| GAGACCCGAAGCAACTGCAG+AGG | + | chr5.2:15211241-15211260 | MS.gene65336:CDS | 60.0% | |
| GCAGTTGCTTCGGGTCTCAC+AGG | - | chr5.2:15211239-15211258 | None:intergenic | 60.0% | |
| GGAACCGGGTCTCGGAAGAT+CGG | + | chr5.2:15211863-15211882 | MS.gene65336:CDS | 60.0% | |
| TTTCGGGCCCCCCATAGTGT+TGG | - | chr5.2:15211327-15211346 | None:intergenic | 60.0% | |
| !! | GCAGCAACGCCGCCATTTTG+AGG | - | chr5.2:15213461-15213480 | None:intergenic | 60.0% |
| CAGCTCAGAAGCCTCGCGGT+TGG | + | chr5.2:15212002-15212021 | MS.gene65336:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 15210341 | 15214289 | 15210341 | ID=MS.gene65336 |
| chr5.2 | mRNA | 15210341 | 15214289 | 15210341 | ID=MS.gene65336.t1;Parent=MS.gene65336 |
| chr5.2 | exon | 15210341 | 15210608 | 15210341 | ID=MS.gene65336.t1.exon1;Parent=MS.gene65336.t1 |
| chr5.2 | CDS | 15210341 | 15210608 | 15210341 | ID=cds.MS.gene65336.t1;Parent=MS.gene65336.t1 |
| chr5.2 | exon | 15210904 | 15212255 | 15210904 | ID=MS.gene65336.t1.exon2;Parent=MS.gene65336.t1 |
| chr5.2 | CDS | 15210904 | 15212255 | 15210904 | ID=cds.MS.gene65336.t1;Parent=MS.gene65336.t1 |
| chr5.2 | exon | 15212342 | 15212619 | 15212342 | ID=MS.gene65336.t1.exon3;Parent=MS.gene65336.t1 |
| chr5.2 | CDS | 15212342 | 15212619 | 15212342 | ID=cds.MS.gene65336.t1;Parent=MS.gene65336.t1 |
| chr5.2 | exon | 15213046 | 15213077 | 15213046 | ID=MS.gene65336.t1.exon4;Parent=MS.gene65336.t1 |
| chr5.2 | CDS | 15213046 | 15213077 | 15213046 | ID=cds.MS.gene65336.t1;Parent=MS.gene65336.t1 |
| chr5.2 | exon | 15213171 | 15213577 | 15213171 | ID=MS.gene65336.t1.exon5;Parent=MS.gene65336.t1 |
| chr5.2 | CDS | 15213171 | 15213577 | 15213171 | ID=cds.MS.gene65336.t1;Parent=MS.gene65336.t1 |
| chr5.2 | exon | 15213780 | 15214289 | 15213780 | ID=MS.gene65336.t1.exon6;Parent=MS.gene65336.t1 |
| chr5.2 | CDS | 15213780 | 15214289 | 15213780 | ID=cds.MS.gene65336.t1;Parent=MS.gene65336.t1 |
| Gene Sequence |
| Protein sequence |