Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052318.t1 | XP_003607319.1 | 95 | 301 | 15 | 0 | 1 | 301 | 29 | 329 | 9.50E-160 | 572.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052318.t1 | A7PQW3 | 60.9 | 307 | 112 | 3 | 3 | 301 | 38 | 344 | 3.8e-101 | 369.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052318.t1 | G7JQL4 | 95.0 | 301 | 15 | 0 | 1 | 301 | 29 | 329 | 6.9e-160 | 572.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049373 | MS.gene052318 | 0.801547 | 8.55E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene052318 | 0.805239 | 1.47E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene052318 | 0.820797 | 5.67E-53 | -1.69E-46 |
| MS.gene052317 | MS.gene052318 | 0.847743 | 9.53E-60 | -1.69E-46 |
| MS.gene052318 | MS.gene052346 | 0.830944 | 2.21E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene052501 | 0.816916 | 4.32E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene052503 | 0.854661 | 1.06E-61 | -1.69E-46 |
| MS.gene052318 | MS.gene052505 | 0.803309 | 3.71E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene052823 | 0.856294 | 3.55E-62 | -1.69E-46 |
| MS.gene052318 | MS.gene052825 | 0.842651 | 2.27E-58 | -1.69E-46 |
| MS.gene052318 | MS.gene053436 | 0.809678 | 1.68E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene053479 | 0.813074 | 3.08E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene053480 | 0.855975 | 4.40E-62 | -1.69E-46 |
| MS.gene052318 | MS.gene053824 | 0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene054107 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene055741 | 0.808313 | 3.29E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene055909 | 0.829743 | 4.34E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene055911 | 0.822319 | 2.52E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene055941 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene056387 | 0.805945 | 1.04E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene057076 | 0.804608 | 1.99E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene057856 | 0.827591 | 1.44E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene057857 | 0.812888 | 3.38E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene058838 | 0.806931 | 6.47E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene06000 | 0.806162 | 9.40E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene060485 | 0.846849 | 1.68E-59 | -1.69E-46 |
| MS.gene052318 | MS.gene060778 | 0.801016 | 1.10E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene061360 | 0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene061617 | 0.807449 | 5.03E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene063115 | 0.82445 | 8.02E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene063722 | 0.811108 | 8.25E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene064707 | 0.808328 | 3.27E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene064832 | 0.811453 | 6.95E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene065099 | 0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene065699 | 0.805881 | 1.08E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene066424 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene067048 | 0.819774 | 9.73E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene067329 | 0.825617 | 4.25E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene069167 | 0.80812 | 3.62E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene069855 | 0.807644 | 4.57E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene071643 | 0.818377 | 2.02E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene071757 | 0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene072306 | 0.801502 | 8.73E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene072573 | 0.80385 | 2.86E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene073123 | 0.8473 | 1.26E-59 | -1.69E-46 |
| MS.gene052318 | MS.gene073310 | 0.823484 | 1.35E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene073883 | 0.809222 | 2.11E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene074291 | 0.84458 | 6.93E-59 | -1.69E-46 |
| MS.gene052318 | MS.gene07524 | 0.80316 | 3.98E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene08523 | 0.861218 | 1.20E-63 | -1.69E-46 |
| MS.gene052318 | MS.gene08766 | 0.803825 | 2.90E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene09566 | 0.803217 | 3.87E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene09795 | 0.824861 | 6.42E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene09797 | 0.812012 | 5.25E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene09951 | 0.80985 | 1.54E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene20109 | 0.801726 | 7.86E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene20358 | 0.824726 | 6.90E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene20415 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene20448 | 0.813227 | 2.85E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene21148 | 0.812757 | 3.61E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene21731 | 0.824989 | 5.99E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene21892 | 0.807935 | 3.96E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene22072 | 0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene22221 | 0.842997 | 1.84E-58 | -1.69E-46 |
| MS.gene052318 | MS.gene22475 | 0.828823 | 7.25E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene22580 | 0.833751 | 4.46E-56 | -1.69E-46 |
| MS.gene052318 | MS.gene22588 | 0.840357 | 9.13E-58 | -1.69E-46 |
| MS.gene052318 | MS.gene22632 | 0.809876 | 1.52E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene22902 | 0.835559 | 1.56E-56 | -1.69E-46 |
| MS.gene052318 | MS.gene22903 | 0.836878 | 7.23E-57 | -1.69E-46 |
| MS.gene052318 | MS.gene22911 | 0.83217 | 1.10E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene24120 | 0.802952 | 4.39E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene24562 | 0.817052 | 4.03E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene24611 | 0.816067 | 6.69E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene24857 | 0.800809 | 1.21E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene25476 | 0.802382 | 5.76E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene25979 | 0.81694 | 4.27E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene26526 | 0.813557 | 2.41E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene26527 | 0.842564 | 2.39E-58 | -1.69E-46 |
| MS.gene052318 | MS.gene27876 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene28990 | 0.821629 | 3.65E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene29510 | 0.802701 | 4.95E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene30202 | 0.819732 | 9.95E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene31403 | 0.805833 | 1.10E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene31567 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene32996 | 0.801392 | 9.20E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene33504 | 0.835142 | 1.99E-56 | -1.69E-46 |
| MS.gene052318 | MS.gene33768 | 0.800805 | 1.21E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene33769 | 0.827204 | 1.78E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene35332 | 0.800744 | 1.25E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene37223 | 0.81161 | 6.42E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene39300 | 0.830453 | 2.91E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene39629 | 0.848962 | 4.39E-60 | -1.69E-46 |
| MS.gene052318 | MS.gene39678 | 0.822258 | 2.61E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene43151 | 0.81515 | 1.07E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene43489 | 0.804951 | 1.69E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene44017 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene44639 | 0.828393 | 9.22E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene45287 | 0.809266 | 2.06E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene46955 | 0.808602 | 2.86E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene47828 | 0.831838 | 1.33E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene49500 | 0.811063 | 8.44E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene49504 | 0.825394 | 4.80E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene50526 | 0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene51258 | 0.804716 | 1.89E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene51603 | 0.812887 | 3.38E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene51840 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene52587 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene52774 | 0.804751 | 1.86E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene53595 | 0.804652 | 1.95E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene54467 | 0.800004 | 1.77E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene54881 | 0.811551 | 6.62E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene55731 | 0.803221 | 3.87E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene55803 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene56776 | 0.831432 | 1.68E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene57140 | 0.806441 | 8.21E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene57239 | 0.815599 | 8.51E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene57602 | 0.804254 | 2.36E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene59475 | 0.82551 | 4.51E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene59657 | 0.813617 | 2.34E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene62860 | 0.805943 | 1.05E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene63050 | 0.816128 | 6.49E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene64048 | 0.811721 | 6.08E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene64385 | 0.815433 | 9.27E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene64777 | 0.831492 | 1.62E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene65336 | 0.801589 | 8.39E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene65400 | 0.809002 | 2.35E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene66774 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene69330 | 0.818752 | 1.66E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene69450 | 0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene69468 | 0.822816 | 1.93E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene70087 | 0.804164 | 2.46E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene70538 | 0.800411 | 1.46E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene71058 | 0.814987 | 1.16E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene71059 | 0.828459 | 8.89E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene71475 | 0.821192 | 4.60E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene71476 | 0.82575 | 3.95E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene71667 | 0.801088 | 1.06E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene71674 | 0.802758 | 4.82E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene72184 | 0.803841 | 2.88E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene72720 | 0.805953 | 1.04E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene72875 | 0.827334 | 1.66E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene73909 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene052318 | MS.gene73910 | 0.830445 | 2.93E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene74287 | 0.824199 | 9.19E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene74288 | 0.801517 | 8.68E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene74300 | 0.81594 | 7.15E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene74575 | 0.843771 | 1.14E-58 | -1.69E-46 |
| MS.gene052318 | MS.gene75014 | 0.805068 | 1.60E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene75660 | 0.804293 | 2.32E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene76027 | 0.825696 | 4.07E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene76141 | 0.803246 | 3.82E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene76745 | 0.805533 | 1.28E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene77025 | 0.803572 | 3.27E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene77675 | 0.801097 | 1.06E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene78724 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene79903 | 0.801541 | 8.58E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene80139 | 0.812512 | 4.08E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene80461 | -0.817132 | 3.86E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene82473 | 0.814344 | 1.62E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene83353 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene83741 | 0.810615 | 1.06E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene85059 | 0.805566 | 1.25E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene85212 | 0.831758 | 1.39E-55 | -1.69E-46 |
| MS.gene052318 | MS.gene86330 | 0.832912 | 7.21E-56 | -1.69E-46 |
| MS.gene052318 | MS.gene86479 | 0.81222 | 4.73E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene88124 | 0.810523 | 1.11E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene88317 | 0.81439 | 1.58E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene88945 | 0.80673 | 7.14E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene88958 | 0.834946 | 2.23E-56 | -1.69E-46 |
| MS.gene052318 | MS.gene89531 | 0.811897 | 5.56E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene90512 | 0.820695 | 5.99E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene91381 | 0.815402 | 9.42E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene92064 | 0.800435 | 1.44E-48 | -1.69E-46 |
| MS.gene052318 | MS.gene92239 | 0.816995 | 4.15E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene92636 | 0.804343 | 2.26E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene93030 | 0.837123 | 6.26E-57 | -1.69E-46 |
| MS.gene052318 | MS.gene93031 | 0.83339 | 5.48E-56 | -1.69E-46 |
| MS.gene052318 | MS.gene94623 | 0.852231 | 5.29E-61 | -1.69E-46 |
| MS.gene052318 | MS.gene95041 | 0.823751 | 1.17E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene95414 | 0.822973 | 1.78E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene96230 | 0.844506 | 7.25E-59 | -1.69E-46 |
| MS.gene052318 | MS.gene96348 | 0.825841 | 3.76E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene96549 | 0.825606 | 4.28E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene96679 | 0.817523 | 3.16E-52 | -1.69E-46 |
| MS.gene052318 | MS.gene96880 | 0.822608 | 2.16E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene97182 | -0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene97914 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene052318 | MS.gene99197 | 0.82426 | 8.89E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene99826 | 0.801209 | 1.00E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052318.t1 | MTR_4g076470 | 95.017 | 301 | 15 | 0 | 1 | 301 | 29 | 329 | 0.0 | 582 |
| MS.gene052318.t1 | MTR_4g076490 | 85.667 | 300 | 42 | 1 | 1 | 299 | 103 | 402 | 0.0 | 527 |
| MS.gene052318.t1 | MTR_4g076430 | 85.382 | 301 | 44 | 0 | 1 | 301 | 29 | 329 | 0.0 | 527 |
| MS.gene052318.t1 | MTR_4g076440 | 82.724 | 301 | 52 | 0 | 1 | 301 | 29 | 329 | 0.0 | 520 |
| MS.gene052318.t1 | MTR_4g076255 | 70.667 | 300 | 86 | 2 | 3 | 301 | 33 | 331 | 9.34e-151 | 426 |
| MS.gene052318.t1 | MTR_4g076500 | 62.092 | 306 | 110 | 5 | 2 | 301 | 85 | 390 | 1.88e-127 | 369 |
| MS.gene052318.t1 | MTR_4g076570 | 56.436 | 303 | 125 | 4 | 2 | 297 | 29 | 331 | 4.71e-119 | 346 |
| MS.gene052318.t1 | MTR_1g052430 | 55.700 | 307 | 125 | 5 | 2 | 299 | 39 | 343 | 3.86e-113 | 333 |
| MS.gene052318.t1 | MTR_2g034480 | 54.870 | 308 | 130 | 4 | 1 | 300 | 33 | 339 | 3.80e-110 | 323 |
| MS.gene052318.t1 | MTR_2g034470 | 52.273 | 308 | 138 | 4 | 1 | 300 | 1 | 307 | 3.26e-103 | 305 |
| MS.gene052318.t1 | MTR_2g034470 | 52.273 | 308 | 138 | 4 | 1 | 300 | 36 | 342 | 7.96e-103 | 305 |
| MS.gene052318.t1 | MTR_2g034440 | 51.780 | 309 | 139 | 5 | 1 | 300 | 28 | 335 | 4.97e-100 | 297 |
| MS.gene052318.t1 | MTR_7g081350 | 43.709 | 302 | 159 | 8 | 3 | 296 | 35 | 333 | 1.28e-77 | 240 |
| MS.gene052318.t1 | MTR_5g085580 | 41.613 | 310 | 165 | 8 | 2 | 296 | 32 | 340 | 3.50e-73 | 233 |
| MS.gene052318.t1 | MTR_7g081370 | 42.475 | 299 | 154 | 8 | 3 | 296 | 36 | 321 | 1.08e-70 | 222 |
| MS.gene052318.t1 | MTR_3g080410 | 40.256 | 313 | 173 | 8 | 2 | 300 | 33 | 345 | 4.33e-70 | 221 |
| MS.gene052318.t1 | MTR_4g052970 | 38.511 | 309 | 175 | 7 | 2 | 296 | 36 | 343 | 1.15e-68 | 218 |
| MS.gene052318.t1 | MTR_2g086530 | 37.338 | 308 | 178 | 6 | 2 | 296 | 15 | 320 | 8.87e-68 | 216 |
| MS.gene052318.t1 | MTR_2g086530 | 37.338 | 308 | 178 | 6 | 2 | 296 | 36 | 341 | 1.09e-67 | 216 |
| MS.gene052318.t1 | MTR_4g010200 | 38.658 | 313 | 178 | 6 | 2 | 300 | 40 | 352 | 4.15e-67 | 214 |
| MS.gene052318.t1 | MTR_4g069940 | 38.413 | 315 | 178 | 7 | 2 | 301 | 36 | 349 | 9.02e-66 | 213 |
| MS.gene052318.t1 | MTR_4g084480 | 38.961 | 308 | 175 | 7 | 2 | 296 | 32 | 339 | 2.80e-65 | 210 |
| MS.gene052318.t1 | MTR_4g084480 | 38.961 | 308 | 175 | 7 | 2 | 296 | 39 | 346 | 3.17e-65 | 210 |
| MS.gene052318.t1 | MTR_4g084480 | 38.961 | 308 | 175 | 7 | 2 | 296 | 39 | 346 | 4.28e-65 | 209 |
| MS.gene052318.t1 | MTR_1g077990 | 38.462 | 312 | 180 | 8 | 2 | 301 | 38 | 349 | 5.74e-64 | 207 |
| MS.gene052318.t1 | MTR_4g114850 | 35.350 | 314 | 189 | 7 | 2 | 301 | 33 | 346 | 1.25e-63 | 204 |
| MS.gene052318.t1 | MTR_1g031900 | 38.000 | 300 | 170 | 6 | 5 | 288 | 34 | 333 | 1.81e-63 | 208 |
| MS.gene052318.t1 | MTR_4g114850 | 35.350 | 314 | 189 | 7 | 2 | 301 | 33 | 346 | 1.98e-63 | 204 |
| MS.gene052318.t1 | MTR_4g114850 | 35.350 | 314 | 189 | 7 | 2 | 301 | 33 | 346 | 2.20e-63 | 205 |
| MS.gene052318.t1 | MTR_3g116510 | 37.662 | 308 | 176 | 7 | 4 | 296 | 37 | 343 | 2.38e-63 | 207 |
| MS.gene052318.t1 | MTR_1g031900 | 38.000 | 300 | 170 | 6 | 5 | 288 | 34 | 333 | 3.33e-63 | 207 |
| MS.gene052318.t1 | MTR_1g007810 | 37.621 | 311 | 173 | 9 | 2 | 296 | 23 | 328 | 3.39e-63 | 204 |
| MS.gene052318.t1 | MTR_1g022160 | 38.065 | 310 | 177 | 8 | 2 | 296 | 31 | 340 | 3.23e-62 | 202 |
| MS.gene052318.t1 | MTR_1g022160 | 38.065 | 310 | 177 | 8 | 2 | 296 | 31 | 340 | 1.44e-61 | 203 |
| MS.gene052318.t1 | MTR_1g022160 | 38.065 | 310 | 177 | 8 | 2 | 296 | 31 | 340 | 1.62e-61 | 202 |
| MS.gene052318.t1 | MTR_1g022160 | 38.065 | 310 | 177 | 8 | 2 | 296 | 31 | 340 | 1.63e-61 | 202 |
| MS.gene052318.t1 | MTR_1g056640 | 37.540 | 309 | 179 | 7 | 2 | 296 | 45 | 353 | 1.97e-61 | 202 |
| MS.gene052318.t1 | MTR_6g088885 | 34.405 | 311 | 191 | 6 | 3 | 300 | 35 | 345 | 2.69e-61 | 202 |
| MS.gene052318.t1 | MTR_2g019345 | 38.312 | 308 | 176 | 7 | 2 | 296 | 31 | 337 | 2.08e-60 | 197 |
| MS.gene052318.t1 | MTR_3g065460 | 36.755 | 302 | 175 | 6 | 4 | 289 | 33 | 334 | 3.12e-59 | 197 |
| MS.gene052318.t1 | MTR_5g078200 | 36.000 | 300 | 176 | 6 | 6 | 289 | 1 | 300 | 7.95e-58 | 196 |
| MS.gene052318.t1 | MTR_5g078200 | 35.762 | 302 | 178 | 6 | 4 | 289 | 32 | 333 | 9.15e-58 | 196 |
| MS.gene052318.t1 | MTR_7g053500 | 35.443 | 316 | 179 | 11 | 2 | 296 | 33 | 344 | 1.33e-57 | 192 |
| MS.gene052318.t1 | MTR_8g012400 | 34.603 | 315 | 185 | 9 | 2 | 297 | 36 | 348 | 6.78e-57 | 190 |
| MS.gene052318.t1 | MTR_8g102340 | 37.849 | 251 | 144 | 5 | 62 | 300 | 62 | 312 | 4.56e-56 | 188 |
| MS.gene052318.t1 | MTR_7g026340 | 35.691 | 311 | 181 | 10 | 2 | 298 | 30 | 335 | 1.60e-55 | 186 |
| MS.gene052318.t1 | MTR_6g032820 | 35.644 | 303 | 176 | 8 | 12 | 296 | 43 | 344 | 5.30e-55 | 184 |
| MS.gene052318.t1 | MTR_7g085390 | 35.644 | 303 | 178 | 8 | 10 | 296 | 41 | 342 | 1.00e-54 | 185 |
| MS.gene052318.t1 | MTR_3g083580 | 33.121 | 314 | 193 | 7 | 5 | 301 | 36 | 349 | 7.81e-54 | 183 |
| MS.gene052318.t1 | MTR_4g088155 | 33.123 | 317 | 189 | 9 | 1 | 296 | 29 | 343 | 1.40e-53 | 181 |
| MS.gene052318.t1 | MTR_4g132280 | 33.766 | 308 | 188 | 6 | 5 | 296 | 55 | 362 | 3.56e-53 | 181 |
| MS.gene052318.t1 | MTR_8g092070 | 34.098 | 305 | 185 | 8 | 12 | 301 | 51 | 354 | 7.49e-53 | 182 |
| MS.gene052318.t1 | MTR_4g112025 | 34.891 | 321 | 176 | 11 | 1 | 297 | 38 | 349 | 9.98e-51 | 175 |
| MS.gene052318.t1 | MTR_8g085720 | 31.310 | 313 | 199 | 6 | 4 | 300 | 35 | 347 | 1.45e-49 | 171 |
| MS.gene052318.t1 | MTR_4g124440 | 33.003 | 303 | 187 | 8 | 9 | 296 | 42 | 343 | 9.97e-49 | 169 |
| MS.gene052318.t1 | MTR_3g095050 | 34.098 | 305 | 183 | 10 | 12 | 301 | 51 | 352 | 3.93e-48 | 167 |
| MS.gene052318.t1 | MTR_8g012400 | 35.662 | 272 | 150 | 9 | 43 | 297 | 5 | 268 | 4.07e-48 | 165 |
| MS.gene052318.t1 | MTR_7g053500 | 37.302 | 252 | 134 | 10 | 65 | 296 | 20 | 267 | 1.87e-47 | 163 |
| MS.gene052318.t1 | MTR_1g053320 | 33.228 | 316 | 189 | 10 | 1 | 297 | 37 | 349 | 2.80e-46 | 162 |
| MS.gene052318.t1 | MTR_3g116510 | 40.385 | 208 | 111 | 5 | 101 | 296 | 3 | 209 | 3.32e-46 | 159 |
| MS.gene052318.t1 | MTR_2g027560 | 33.553 | 304 | 180 | 10 | 12 | 296 | 45 | 345 | 1.38e-44 | 158 |
| MS.gene052318.t1 | MTR_4g083500 | 33.871 | 310 | 187 | 10 | 2 | 296 | 51 | 357 | 4.89e-44 | 157 |
| MS.gene052318.t1 | MTR_1g010120 | 34.304 | 309 | 186 | 10 | 6 | 299 | 38 | 344 | 1.63e-42 | 152 |
| MS.gene052318.t1 | MTR_3g031770 | 33.223 | 301 | 185 | 11 | 11 | 297 | 43 | 341 | 4.34e-42 | 151 |
| MS.gene052318.t1 | MTR_3g108600 | 32.792 | 308 | 172 | 10 | 5 | 297 | 41 | 328 | 1.11e-38 | 142 |
| MS.gene052318.t1 | MTR_5g081720 | 29.210 | 291 | 186 | 11 | 21 | 296 | 63 | 348 | 2.54e-32 | 123 |
| MS.gene052318.t1 | MTR_4g036680 | 41.667 | 180 | 80 | 6 | 121 | 299 | 21 | 176 | 5.03e-32 | 119 |
| MS.gene052318.t1 | MTR_4g036680 | 52.632 | 57 | 27 | 0 | 2 | 58 | 29 | 85 | 1.35e-13 | 68.9 |
| MS.gene052318.t1 | MTR_4g036775 | 57.732 | 97 | 40 | 1 | 204 | 299 | 80 | 176 | 5.25e-32 | 119 |
| MS.gene052318.t1 | MTR_4g036775 | 52.632 | 57 | 27 | 0 | 2 | 58 | 29 | 85 | 4.66e-14 | 70.5 |
| MS.gene052318.t1 | MTR_4g134280 | 34.199 | 231 | 133 | 9 | 81 | 296 | 2 | 228 | 5.48e-32 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052318.t1 | AT4G16260 | 49.837 | 307 | 145 | 5 | 1 | 300 | 1 | 305 | 3.80e-103 | 304 |
| MS.gene052318.t1 | AT3G57260 | 53.094 | 307 | 133 | 7 | 1 | 301 | 38 | 339 | 5.70e-103 | 305 |
| MS.gene052318.t1 | AT3G57260 | 53.094 | 307 | 133 | 7 | 1 | 301 | 54 | 355 | 7.27e-103 | 305 |
| MS.gene052318.t1 | AT4G16260 | 49.675 | 308 | 146 | 5 | 1 | 301 | 30 | 335 | 9.29e-103 | 304 |
| MS.gene052318.t1 | AT3G57270 | 49.836 | 305 | 146 | 4 | 3 | 300 | 35 | 339 | 1.25e-98 | 293 |
| MS.gene052318.t1 | AT3G57240 | 50.489 | 307 | 136 | 7 | 3 | 301 | 43 | 341 | 8.02e-98 | 291 |
| MS.gene052318.t1 | AT5G20390 | 41.333 | 300 | 162 | 9 | 1 | 290 | 39 | 334 | 4.01e-71 | 223 |
| MS.gene052318.t1 | AT2G05790 | 39.297 | 313 | 176 | 7 | 2 | 300 | 32 | 344 | 1.25e-70 | 226 |
| MS.gene052318.t1 | AT4G26830 | 39.103 | 312 | 177 | 6 | 2 | 300 | 32 | 343 | 4.05e-70 | 224 |
| MS.gene052318.t1 | AT4G26830 | 39.103 | 312 | 177 | 6 | 2 | 300 | 36 | 347 | 4.72e-70 | 224 |
| MS.gene052318.t1 | AT5G20340 | 40.532 | 301 | 165 | 9 | 1 | 291 | 49 | 345 | 1.55e-69 | 219 |
| MS.gene052318.t1 | AT2G16230 | 40.323 | 310 | 171 | 7 | 1 | 296 | 31 | 340 | 3.61e-69 | 223 |
| MS.gene052318.t1 | AT5G56590 | 36.741 | 313 | 183 | 6 | 3 | 300 | 34 | 346 | 1.39e-68 | 221 |
| MS.gene052318.t1 | AT4G18340 | 38.658 | 313 | 179 | 6 | 2 | 301 | 41 | 353 | 1.41e-68 | 218 |
| MS.gene052318.t1 | AT4G18340 | 38.658 | 313 | 179 | 6 | 2 | 301 | 41 | 353 | 2.49e-68 | 218 |
| MS.gene052318.t1 | AT1G32860 | 37.580 | 314 | 181 | 7 | 2 | 300 | 36 | 349 | 1.00e-67 | 217 |
| MS.gene052318.t1 | AT1G77790 | 38.689 | 305 | 173 | 8 | 3 | 296 | 38 | 339 | 1.02e-67 | 215 |
| MS.gene052318.t1 | AT2G01630 | 39.286 | 308 | 171 | 7 | 5 | 296 | 33 | 340 | 1.55e-67 | 216 |
| MS.gene052318.t1 | AT2G01630 | 40.000 | 300 | 164 | 7 | 5 | 288 | 33 | 332 | 5.49e-67 | 216 |
| MS.gene052318.t1 | AT2G01630 | 40.000 | 300 | 164 | 7 | 5 | 288 | 33 | 332 | 1.93e-66 | 216 |
| MS.gene052318.t1 | AT5G20330 | 39.667 | 300 | 167 | 9 | 1 | 290 | 40 | 335 | 4.90e-66 | 210 |
| MS.gene052318.t1 | AT5G55180 | 37.580 | 314 | 182 | 8 | 2 | 301 | 34 | 347 | 4.99e-66 | 214 |
| MS.gene052318.t1 | AT5G55180 | 37.580 | 314 | 182 | 8 | 2 | 301 | 34 | 347 | 5.14e-66 | 214 |
| MS.gene052318.t1 | AT5G42100 | 40.514 | 311 | 169 | 7 | 2 | 296 | 34 | 344 | 3.05e-65 | 211 |
| MS.gene052318.t1 | AT5G42100 | 40.514 | 311 | 169 | 7 | 2 | 296 | 34 | 344 | 3.30e-65 | 211 |
| MS.gene052318.t1 | AT1G33220 | 40.210 | 286 | 158 | 8 | 1 | 276 | 40 | 322 | 5.78e-65 | 207 |
| MS.gene052318.t1 | AT2G27500 | 36.246 | 309 | 183 | 8 | 2 | 296 | 36 | 344 | 1.37e-64 | 207 |
| MS.gene052318.t1 | AT2G27500 | 36.246 | 309 | 183 | 8 | 2 | 296 | 36 | 344 | 2.72e-64 | 207 |
| MS.gene052318.t1 | AT5G42720 | 38.585 | 311 | 176 | 8 | 1 | 296 | 32 | 342 | 3.25e-64 | 208 |
| MS.gene052318.t1 | AT1G30080 | 37.987 | 308 | 178 | 7 | 2 | 296 | 43 | 350 | 3.74e-64 | 207 |
| MS.gene052318.t1 | AT1G30080 | 37.987 | 308 | 178 | 7 | 2 | 296 | 43 | 350 | 4.62e-64 | 207 |
| MS.gene052318.t1 | AT4G34480 | 40.453 | 309 | 170 | 7 | 2 | 296 | 33 | 341 | 2.32e-63 | 204 |
| MS.gene052318.t1 | AT2G26600 | 34.076 | 314 | 193 | 8 | 2 | 301 | 41 | 354 | 1.32e-62 | 203 |
| MS.gene052318.t1 | AT4G34480 | 40.453 | 309 | 170 | 7 | 2 | 296 | 33 | 341 | 1.22e-61 | 203 |
| MS.gene052318.t1 | AT5G24318 | 36.334 | 311 | 177 | 9 | 2 | 296 | 37 | 342 | 9.37e-60 | 195 |
| MS.gene052318.t1 | AT1G77780 | 35.644 | 303 | 182 | 9 | 3 | 296 | 32 | 330 | 1.84e-59 | 194 |
| MS.gene052318.t1 | AT5G24318 | 36.334 | 311 | 177 | 9 | 2 | 296 | 37 | 342 | 1.07e-58 | 194 |
| MS.gene052318.t1 | AT3G15800 | 35.806 | 310 | 184 | 7 | 2 | 296 | 50 | 359 | 1.33e-58 | 193 |
| MS.gene052318.t1 | AT5G24318 | 36.334 | 311 | 177 | 9 | 2 | 296 | 37 | 342 | 1.64e-58 | 194 |
| MS.gene052318.t1 | AT3G61810 | 33.439 | 314 | 190 | 6 | 3 | 301 | 63 | 372 | 7.48e-58 | 190 |
| MS.gene052318.t1 | AT1G66250 | 36.364 | 308 | 179 | 7 | 5 | 296 | 42 | 348 | 1.19e-57 | 193 |
| MS.gene052318.t1 | AT2G27500 | 38.340 | 253 | 143 | 7 | 57 | 296 | 14 | 266 | 1.02e-55 | 183 |
| MS.gene052318.t1 | AT5G20560 | 35.333 | 300 | 181 | 8 | 1 | 290 | 40 | 336 | 2.03e-55 | 183 |
| MS.gene052318.t1 | AT3G07320 | 33.227 | 313 | 190 | 8 | 2 | 296 | 32 | 343 | 3.72e-54 | 183 |
| MS.gene052318.t1 | AT1G11820 | 32.558 | 301 | 187 | 6 | 4 | 288 | 53 | 353 | 7.17e-54 | 180 |
| MS.gene052318.t1 | AT4G29360 | 35.048 | 311 | 189 | 6 | 3 | 300 | 35 | 345 | 1.20e-53 | 183 |
| MS.gene052318.t1 | AT4G29360 | 35.048 | 311 | 189 | 6 | 3 | 300 | 45 | 355 | 1.49e-53 | 183 |
| MS.gene052318.t1 | AT1G11820 | 32.558 | 301 | 187 | 6 | 4 | 288 | 53 | 353 | 6.35e-53 | 180 |
| MS.gene052318.t1 | AT1G11820 | 32.558 | 301 | 187 | 6 | 4 | 288 | 53 | 353 | 1.37e-52 | 180 |
| MS.gene052318.t1 | AT2G26600 | 34.884 | 258 | 155 | 7 | 57 | 301 | 3 | 260 | 1.43e-52 | 174 |
| MS.gene052318.t1 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 5.24e-52 | 178 |
| MS.gene052318.t1 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 5.24e-52 | 178 |
| MS.gene052318.t1 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 5.24e-52 | 178 |
| MS.gene052318.t1 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 5.24e-52 | 178 |
| MS.gene052318.t1 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 5.24e-52 | 178 |
| MS.gene052318.t1 | AT5G18220 | 33.555 | 301 | 184 | 7 | 10 | 296 | 45 | 343 | 1.23e-51 | 177 |
| MS.gene052318.t1 | AT2G19440 | 34.936 | 312 | 184 | 10 | 1 | 296 | 28 | 336 | 1.37e-51 | 176 |
| MS.gene052318.t1 | AT2G19440 | 34.936 | 312 | 184 | 10 | 1 | 296 | 28 | 336 | 1.37e-51 | 176 |
| MS.gene052318.t1 | AT5G58090 | 35.333 | 300 | 178 | 9 | 12 | 296 | 39 | 337 | 1.27e-50 | 174 |
| MS.gene052318.t1 | AT4G14080 | 32.911 | 316 | 192 | 9 | 3 | 300 | 50 | 363 | 2.01e-50 | 173 |
| MS.gene052318.t1 | AT3G23770 | 33.542 | 319 | 193 | 8 | 2 | 301 | 44 | 362 | 2.29e-50 | 173 |
| MS.gene052318.t1 | AT1G64760 | 33.762 | 311 | 189 | 9 | 1 | 296 | 32 | 340 | 9.21e-49 | 169 |
| MS.gene052318.t1 | AT1G64760 | 33.762 | 311 | 189 | 9 | 1 | 296 | 32 | 340 | 9.21e-49 | 169 |
| MS.gene052318.t1 | AT5G58480 | 33.762 | 311 | 189 | 10 | 6 | 301 | 38 | 346 | 1.49e-47 | 166 |
| MS.gene052318.t1 | AT4G31140 | 33.882 | 304 | 185 | 9 | 12 | 300 | 44 | 346 | 1.29e-46 | 163 |
| MS.gene052318.t1 | AT3G04010 | 32.492 | 317 | 193 | 10 | 1 | 300 | 40 | 352 | 4.10e-46 | 162 |
| MS.gene052318.t1 | AT3G46570 | 34.185 | 313 | 182 | 12 | 2 | 296 | 34 | 340 | 4.29e-45 | 156 |
| MS.gene052318.t1 | AT3G24330 | 32.911 | 316 | 189 | 12 | 1 | 297 | 46 | 357 | 1.06e-44 | 159 |
| MS.gene052318.t1 | AT4G34480 | 42.982 | 228 | 117 | 6 | 82 | 296 | 3 | 230 | 2.97e-44 | 155 |
| MS.gene052318.t1 | AT5G64790 | 31.579 | 304 | 192 | 8 | 12 | 300 | 45 | 347 | 4.93e-44 | 157 |
| MS.gene052318.t1 | AT3G55430 | 32.899 | 307 | 186 | 11 | 5 | 296 | 38 | 339 | 5.19e-44 | 156 |
| MS.gene052318.t1 | AT2G39640 | 33.333 | 303 | 186 | 9 | 5 | 296 | 39 | 336 | 1.63e-43 | 156 |
| MS.gene052318.t1 | AT4G17180 | 32.226 | 301 | 183 | 9 | 12 | 297 | 42 | 336 | 4.41e-43 | 154 |
| MS.gene052318.t1 | AT5G20870 | 31.310 | 313 | 188 | 11 | 12 | 300 | 47 | 356 | 3.74e-41 | 149 |
| MS.gene052318.t1 | AT5G24318 | 39.904 | 208 | 107 | 7 | 102 | 296 | 1 | 203 | 6.91e-41 | 144 |
| MS.gene052318.t1 | AT3G55780 | 28.477 | 302 | 193 | 11 | 18 | 301 | 58 | 354 | 1.35e-35 | 132 |
Find 73 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAATGTTGGAACCTTTA+AGG | 0.082782 | 4.4:+34013301 | None:intergenic |
| CAAGCCCTTCAAGCCCTTAA+AGG | 0.219614 | 4.4:-34013315 | MS.gene052318:CDS |
| GCTTGAAGGGCTTGTTCGTC+TGG | 0.228164 | 4.4:+34013324 | None:intergenic |
| TTCTTTAGGAAGTCTATTAT+TGG | 0.255166 | 4.4:+34012961 | None:intergenic |
| ATGCCAATCAAGCTACAAAT+TGG | 0.258407 | 4.4:-34013236 | MS.gene052318:CDS |
| GAAGCAACTGAACAGCATTT+TGG | 0.286265 | 4.4:-34012574 | MS.gene052318:CDS |
| TTCAATGTTGGAACCTTTAA+GGG | 0.315127 | 4.4:+34013302 | None:intergenic |
| TCCACAACTTCTTGACTTGA+TGG | 0.320456 | 4.4:+34013390 | None:intergenic |
| CCGCATATACCGAGTCTAAC+TGG | 0.321766 | 4.4:+34012803 | None:intergenic |
| TCAATAGCTCCGGGTCTCTT+AGG | 0.330851 | 4.4:+34012640 | None:intergenic |
| ACTGGGCATCAAAGAGGTTT+TGG | 0.338461 | 4.4:+34012821 | None:intergenic |
| GACCCAATTTGTAGCTTGAT+TGG | 0.339546 | 4.4:+34013233 | None:intergenic |
| GCATGGCAGTGGCAATGTAC+TGG | 0.346712 | 4.4:+34013124 | None:intergenic |
| GTGGTGCTCCATTGTTCTTT+AGG | 0.350917 | 4.4:+34012947 | None:intergenic |
| TACTGGGCTTCATTGTCATT+AGG | 0.366506 | 4.4:+34013141 | None:intergenic |
| TATCCGTACTTCGCTTATAT+CGG | 0.370137 | 4.4:-34012910 | MS.gene052318:CDS |
| TTGCTGTTGAGACCTTGATT+TGG | 0.384562 | 4.4:+34013061 | None:intergenic |
| GCAATTGACATGACCTTGAT+TGG | 0.397750 | 4.4:-34013042 | MS.gene052318:CDS |
| ATGCGGCTCTTGAGAAAGTT+GGG | 0.402933 | 4.4:-34012786 | MS.gene052318:CDS |
| CTTGAAGGGCTTGTTCGTCT+GGG | 0.403107 | 4.4:+34013325 | None:intergenic |
| GTCAGTGAAAACACCATCAT+TGG | 0.415151 | 4.4:+34013005 | None:intergenic |
| ATTTCATCTGCAACTTTACA+AGG | 0.423968 | 4.4:-34013084 | MS.gene052318:CDS |
| TTGATCAATCACGTCAAGAA+TGG | 0.444453 | 4.4:-34012667 | MS.gene052318:CDS |
| TGGAACCTTTAAGGGCTTGA+AGG | 0.446944 | 4.4:+34013310 | None:intergenic |
| TGATATTTAGATGATTTGTC+AGG | 0.458349 | 4.4:+34012541 | None:intergenic |
| CAAGTAAGTCTCAATAGCTC+CGG | 0.459135 | 4.4:+34012630 | None:intergenic |
| CATGGCAGTGGCAATGTACT+GGG | 0.461472 | 4.4:+34013125 | None:intergenic |
| AAAATCAAGTATATCTCTGT+TGG | 0.466151 | 4.4:-34013177 | MS.gene052318:CDS |
| GAGAGAAGAAAGGGTTTCCT+TGG | 0.473937 | 4.4:+34013263 | None:intergenic |
| TATGCGGCTCTTGAGAAAGT+TGG | 0.477765 | 4.4:-34012787 | MS.gene052318:CDS |
| GTGGATTTATACAAGTCAAA+TGG | 0.478333 | 4.4:-34013372 | MS.gene052318:CDS |
| TGATCAATCACGTCAAGAAT+GGG | 0.496832 | 4.4:-34012666 | MS.gene052318:CDS |
| AACAAGGAAACAATGAGGTT+GGG | 0.499103 | 4.4:-34012846 | MS.gene052318:CDS |
| TGCCAATCAAGCTACAAATT+GGG | 0.500599 | 4.4:-34013235 | MS.gene052318:CDS |
| GGAGTTTGCTATGGAATGCT+TGG | 0.503294 | 4.4:-34013423 | None:intergenic |
| TGGATATGAATTACCAATCA+AGG | 0.504684 | 4.4:+34013029 | None:intergenic |
| CAACAAGGAAACAATGAGGT+TGG | 0.509335 | 4.4:-34012847 | MS.gene052318:CDS |
| CGCATATACCGAGTCTAACT+GGG | 0.519959 | 4.4:+34012804 | None:intergenic |
| GGCATCTGTGAGAGAAGAAA+GGG | 0.523286 | 4.4:+34013254 | None:intergenic |
| GGAACCTTTAAGGGCTTGAA+GGG | 0.527762 | 4.4:+34013311 | None:intergenic |
| ATCAAGGATCAATTCAATGT+TGG | 0.533484 | 4.4:+34013290 | None:intergenic |
| ACCATCAAGTCAAGAAGTTG+TGG | 0.540439 | 4.4:-34013391 | MS.gene052318:CDS |
| TGGCATCTGTGAGAGAAGAA+AGG | 0.541551 | 4.4:+34013253 | None:intergenic |
| TTGAAGGGCTTGTTCGTCTG+GGG | 0.546385 | 4.4:+34013326 | None:intergenic |
| AACTTTACAAGGCCAAATCA+AGG | 0.547349 | 4.4:-34013073 | MS.gene052318:CDS |
| ATCAGATGGCCATCCACTCT+CGG | 0.548201 | 4.4:+34012738 | None:intergenic |
| AATTCATATCCACCCAATGA+TGG | 0.549574 | 4.4:-34013018 | MS.gene052318:CDS |
| GATCAAATTAGTATAATATG+TGG | 0.552087 | 4.4:+34012684 | None:intergenic |
| TCAGTGAAAACACCATCATT+GGG | 0.553202 | 4.4:+34013006 | None:intergenic |
| AAGTAAGTCTCAATAGCTCC+GGG | 0.554259 | 4.4:+34012631 | None:intergenic |
| GGGTTTCCTTGGCCACATCA+AGG | 0.566068 | 4.4:+34013274 | None:intergenic |
| CTTTGATGCCCAGTTAGACT+CGG | 0.571891 | 4.4:-34012812 | MS.gene052318:CDS |
| TTTGATGAAAATCTAAAGAA+TGG | 0.572490 | 4.4:-34012598 | MS.gene052318:CDS |
| TAGTTGTGTCCGAGAGTGGA+TGG | 0.576028 | 4.4:-34012747 | MS.gene052318:CDS |
| TGCGGCTCTTGAGAAAGTTG+GGG | 0.586062 | 4.4:-34012785 | MS.gene052318:CDS |
| AAGATAGTTGTGTCCGAGAG+TGG | 0.586296 | 4.4:-34012751 | MS.gene052318:CDS |
| ATAGACTTCCTAAAGAACAA+TGG | 0.595560 | 4.4:-34012955 | MS.gene052318:CDS |
| GCACTATCTCCACCATCAGA+TGG | 0.608276 | 4.4:+34012724 | None:intergenic |
| GGATACACATTGGCAAGAAG+TGG | 0.610222 | 4.4:+34012928 | None:intergenic |
| GAGAGTGGATGGCCATCTGA+TGG | 0.610447 | 4.4:-34012736 | MS.gene052318:CDS |
| ATTGATCCTTGATGTGGCCA+AGG | 0.612707 | 4.4:-34013280 | MS.gene052318:CDS |
| TAAACAACAAGGAAACAATG+AGG | 0.614647 | 4.4:-34012851 | MS.gene052318:CDS |
| AGTCTAACTGGGCATCAAAG+AGG | 0.625012 | 4.4:+34012815 | None:intergenic |
| CCAGTTAGACTCGGTATATG+CGG | 0.629503 | 4.4:-34012803 | MS.gene052318:CDS |
| TTACCGATATAAGCGAAGTA+CGG | 0.629947 | 4.4:+34012907 | None:intergenic |
| CATTGAATTGATCCTTGATG+TGG | 0.639261 | 4.4:-34013286 | MS.gene052318:CDS |
| AATGGGACTCCTAAGAGACC+CGG | 0.649769 | 4.4:-34012649 | MS.gene052318:CDS |
| TGTGGAAGCATTGTCAGTTG+AGG | 0.652637 | 4.4:+34012702 | None:intergenic |
| AGCGAAGTACGGATACACAT+TGG | 0.661063 | 4.4:+34012918 | None:intergenic |
| GTGAAAACACCATCATTGGG+TGG | 0.672842 | 4.4:+34013009 | None:intergenic |
| AGTGGATGGCCATCTGATGG+TGG | 0.674681 | 4.4:-34012733 | MS.gene052318:CDS |
| GCGGCTCTTGAGAAAGTTGG+GGG | 0.680343 | 4.4:-34012784 | MS.gene052318:CDS |
| GGACACAACTATCTTCACAT+CGG | 0.708430 | 4.4:+34012759 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATCAAATTAGTATAATATG+TGG | + | chr4.4:34013252-34013271 | None:intergenic | 20.0% |
| !! | TTTGATGAAAATCTAAAGAA+TGG | - | chr4.4:34013335-34013354 | MS.gene052318:CDS | 20.0% |
| ! | AAAATCAAGTATATCTCTGT+TGG | - | chr4.4:34012756-34012775 | MS.gene052318:CDS | 25.0% |
| !! | ATTTTTACATCTTGAGCATA+GGG | + | chr4.4:34012741-34012760 | None:intergenic | 25.0% |
| !! | CTTTAGATTTTCATCAAACA+TGG | + | chr4.4:34013333-34013352 | None:intergenic | 25.0% |
| !! | TATGCTCTTTTTAAACAACA+AGG | - | chr4.4:34013071-34013090 | MS.gene052318:CDS | 25.0% |
| !! | TGATATTTAGATGATTTGTC+AGG | + | chr4.4:34013395-34013414 | None:intergenic | 25.0% |
| !! | TTCTTTAGGAAGTCTATTAT+TGG | + | chr4.4:34012975-34012994 | None:intergenic | 25.0% |
| !!! | GTTGTAAATATTGTTTTGCT+TGG | + | chr4.4:34012953-34012972 | None:intergenic | 25.0% |
| ATAGACTTCCTAAAGAACAA+TGG | - | chr4.4:34012978-34012997 | MS.gene052318:CDS | 30.0% | |
| ATCAAGGATCAATTCAATGT+TGG | + | chr4.4:34012646-34012665 | None:intergenic | 30.0% | |
| ATTCAATGTTGGAACCTTTA+AGG | + | chr4.4:34012635-34012654 | None:intergenic | 30.0% | |
| ATTTCATCTGCAACTTTACA+AGG | - | chr4.4:34012849-34012868 | MS.gene052318:CDS | 30.0% | |
| GTGGATTTATACAAGTCAAA+TGG | - | chr4.4:34012561-34012580 | MS.gene052318:CDS | 30.0% | |
| TAAACAACAAGGAAACAATG+AGG | - | chr4.4:34013082-34013101 | MS.gene052318:CDS | 30.0% | |
| TGGATATGAATTACCAATCA+AGG | + | chr4.4:34012907-34012926 | None:intergenic | 30.0% | |
| TTCAATGTTGGAACCTTTAA+GGG | + | chr4.4:34012634-34012653 | None:intergenic | 30.0% | |
| ! | GATTTTTACATCTTGAGCAT+AGG | + | chr4.4:34012742-34012761 | None:intergenic | 30.0% |
| ! | TGCATTTTGAATGTTTTGCA+TGG | + | chr4.4:34012829-34012848 | None:intergenic | 30.0% |
| ! | TTAAAAAGAGCATAGTCAAG+AGG | + | chr4.4:34013065-34013084 | None:intergenic | 30.0% |
| AACAAGGAAACAATGAGGTT+GGG | - | chr4.4:34013087-34013106 | MS.gene052318:CDS | 35.0% | |
| AACTTTACAAGGCCAAATCA+AGG | - | chr4.4:34012860-34012879 | MS.gene052318:CDS | 35.0% | |
| AATTCATATCCACCCAATGA+TGG | - | chr4.4:34012915-34012934 | MS.gene052318:CDS | 35.0% | |
| ATGCCAATCAAGCTACAAAT+TGG | - | chr4.4:34012697-34012716 | MS.gene052318:CDS | 35.0% | |
| CATTGAATTGATCCTTGATG+TGG | - | chr4.4:34012647-34012666 | MS.gene052318:CDS | 35.0% | |
| TATCCGTACTTCGCTTATAT+CGG | - | chr4.4:34013023-34013042 | MS.gene052318:CDS | 35.0% | |
| TCAGTGAAAACACCATCATT+GGG | + | chr4.4:34012930-34012949 | None:intergenic | 35.0% | |
| TGATCAATCACGTCAAGAAT+GGG | - | chr4.4:34013267-34013286 | MS.gene052318:CDS | 35.0% | |
| TGCCAATCAAGCTACAAATT+GGG | - | chr4.4:34012698-34012717 | MS.gene052318:CDS | 35.0% | |
| TTACCGATATAAGCGAAGTA+CGG | + | chr4.4:34013029-34013048 | None:intergenic | 35.0% | |
| TTGATCAATCACGTCAAGAA+TGG | - | chr4.4:34013266-34013285 | MS.gene052318:CDS | 35.0% | |
| !! | CATAGGGTGTCACATATTTT+TGG | + | chr4.4:34012725-34012744 | None:intergenic | 35.0% |
| AAGTAAGTCTCAATAGCTCC+GGG | + | chr4.4:34013305-34013324 | None:intergenic | 40.0% | |
| ACCATCAAGTCAAGAAGTTG+TGG | - | chr4.4:34012542-34012561 | MS.gene052318:CDS | 40.0% | |
| CAACAAGGAAACAATGAGGT+TGG | - | chr4.4:34013086-34013105 | MS.gene052318:CDS | 40.0% | |
| CAAGTAAGTCTCAATAGCTC+CGG | + | chr4.4:34013306-34013325 | None:intergenic | 40.0% | |
| GACCCAATTTGTAGCTTGAT+TGG | + | chr4.4:34012703-34012722 | None:intergenic | 40.0% | |
| GCAATTGACATGACCTTGAT+TGG | - | chr4.4:34012891-34012910 | MS.gene052318:CDS | 40.0% | |
| GGACACAACTATCTTCACAT+CGG | + | chr4.4:34013177-34013196 | None:intergenic | 40.0% | |
| GTCAGTGAAAACACCATCAT+TGG | + | chr4.4:34012931-34012950 | None:intergenic | 40.0% | |
| TACTGGGCTTCATTGTCATT+AGG | + | chr4.4:34012795-34012814 | None:intergenic | 40.0% | |
| ! | GAAGCAACTGAACAGCATTT+TGG | - | chr4.4:34013359-34013378 | MS.gene052318:CDS | 40.0% |
| ! | TCCACAACTTCTTGACTTGA+TGG | + | chr4.4:34012546-34012565 | None:intergenic | 40.0% |
| ! | TTGAATGTTTTGCATGGCAG+TGG | + | chr4.4:34012823-34012842 | None:intergenic | 40.0% |
| ! | TTGCTGTTGAGACCTTGATT+TGG | + | chr4.4:34012875-34012894 | None:intergenic | 40.0% |
| AAGATAGTTGTGTCCGAGAG+TGG | - | chr4.4:34013182-34013201 | MS.gene052318:CDS | 45.0% | |
| AGCGAAGTACGGATACACAT+TGG | + | chr4.4:34013018-34013037 | None:intergenic | 45.0% | |
| AGTCTAACTGGGCATCAAAG+AGG | + | chr4.4:34013121-34013140 | None:intergenic | 45.0% | |
| ATGCGGCTCTTGAGAAAGTT+GGG | - | chr4.4:34013147-34013166 | MS.gene052318:CDS | 45.0% | |
| ATTGATCCTTGATGTGGCCA+AGG | - | chr4.4:34012653-34012672 | MS.gene052318:CDS | 45.0% | |
| CGCATATACCGAGTCTAACT+GGG | + | chr4.4:34013132-34013151 | None:intergenic | 45.0% | |
| CTTTGATGCCCAGTTAGACT+CGG | - | chr4.4:34013121-34013140 | MS.gene052318:CDS | 45.0% | |
| GAGAGAAGAAAGGGTTTCCT+TGG | + | chr4.4:34012673-34012692 | None:intergenic | 45.0% | |
| GGATACACATTGGCAAGAAG+TGG | + | chr4.4:34013008-34013027 | None:intergenic | 45.0% | |
| GGCATCTGTGAGAGAAGAAA+GGG | + | chr4.4:34012682-34012701 | None:intergenic | 45.0% | |
| GTGAAAACACCATCATTGGG+TGG | + | chr4.4:34012927-34012946 | None:intergenic | 45.0% | |
| GTGGTGCTCCATTGTTCTTT+AGG | + | chr4.4:34012989-34013008 | None:intergenic | 45.0% | |
| TATGCGGCTCTTGAGAAAGT+TGG | - | chr4.4:34013146-34013165 | MS.gene052318:CDS | 45.0% | |
| TGGCATCTGTGAGAGAAGAA+AGG | + | chr4.4:34012683-34012702 | None:intergenic | 45.0% | |
| ! | ACTGGGCATCAAAGAGGTTT+TGG | + | chr4.4:34013115-34013134 | None:intergenic | 45.0% |
| ! | CCAGTTAGACTCGGTATATG+CGG | - | chr4.4:34013130-34013149 | MS.gene052318:CDS | 45.0% |
| ! | GGAACCTTTAAGGGCTTGAA+GGG | + | chr4.4:34012625-34012644 | None:intergenic | 45.0% |
| ! | TGGAACCTTTAAGGGCTTGA+AGG | + | chr4.4:34012626-34012645 | None:intergenic | 45.0% |
| !! | TGTGGAAGCATTGTCAGTTG+AGG | + | chr4.4:34013234-34013253 | None:intergenic | 45.0% |
| AATGGGACTCCTAAGAGACC+CGG | - | chr4.4:34013284-34013303 | MS.gene052318:CDS | 50.0% | |
| ATCAGATGGCCATCCACTCT+CGG | + | chr4.4:34013198-34013217 | None:intergenic | 50.0% | |
| CAAGCCCTTCAAGCCCTTAA+AGG | - | chr4.4:34012618-34012637 | MS.gene052318:CDS | 50.0% | |
| CATGGCAGTGGCAATGTACT+GGG | + | chr4.4:34012811-34012830 | None:intergenic | 50.0% | |
| CCGCATATACCGAGTCTAAC+TGG | + | chr4.4:34013133-34013152 | None:intergenic | 50.0% | |
| GCACTATCTCCACCATCAGA+TGG | + | chr4.4:34013212-34013231 | None:intergenic | 50.0% | |
| TAGTTGTGTCCGAGAGTGGA+TGG | - | chr4.4:34013186-34013205 | MS.gene052318:CDS | 50.0% | |
| TCAATAGCTCCGGGTCTCTT+AGG | + | chr4.4:34013296-34013315 | None:intergenic | 50.0% | |
| TGCGGCTCTTGAGAAAGTTG+GGG | - | chr4.4:34013148-34013167 | MS.gene052318:CDS | 50.0% | |
| ! | CTTGAAGGGCTTGTTCGTCT+GGG | + | chr4.4:34012611-34012630 | None:intergenic | 50.0% |
| ! | TTGAAGGGCTTGTTCGTCTG+GGG | + | chr4.4:34012610-34012629 | None:intergenic | 50.0% |
| AGTGGATGGCCATCTGATGG+TGG | - | chr4.4:34013200-34013219 | MS.gene052318:CDS | 55.0% | |
| GAGAGTGGATGGCCATCTGA+TGG | - | chr4.4:34013197-34013216 | MS.gene052318:CDS | 55.0% | |
| GCATGGCAGTGGCAATGTAC+TGG | + | chr4.4:34012812-34012831 | None:intergenic | 55.0% | |
| GCGGCTCTTGAGAAAGTTGG+GGG | - | chr4.4:34013149-34013168 | MS.gene052318:CDS | 55.0% | |
| GGGTTTCCTTGGCCACATCA+AGG | + | chr4.4:34012662-34012681 | None:intergenic | 55.0% | |
| ! | GCTTGAAGGGCTTGTTCGTC+TGG | + | chr4.4:34012612-34012631 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 34012525 | 34013430 | 34012525 | ID=MS.gene052318 |
| chr4.4 | mRNA | 34012525 | 34013430 | 34012525 | ID=MS.gene052318.t1;Parent=MS.gene052318 |
| chr4.4 | exon | 34012525 | 34013430 | 34012525 | ID=MS.gene052318.t1.exon1;Parent=MS.gene052318.t1 |
| chr4.4 | CDS | 34012525 | 34013430 | 34012525 | ID=cds.MS.gene052318.t1;Parent=MS.gene052318.t1 |
| Gene Sequence |
| Protein sequence |
