AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055787

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055787.t1 MTR_2g090605 96.651 418 5 4 1 412 1 415 0.0 823
MS.gene055787.t1 MTR_4g078660 64.615 195 36 4 31 223 29 192 6.88e-81 251
MS.gene055787.t1 MTR_6g090380 67.883 137 32 2 56 180 70 206 4.75e-66 215
MS.gene055787.t1 MTR_8g102100 38.056 360 169 11 63 411 59 375 2.59e-63 208
MS.gene055787.t1 MTR_7g092070 68.966 116 36 0 73 188 260 375 1.92e-57 201
MS.gene055787.t1 MTR_3g029590 46.522 230 94 6 73 291 260 471 1.45e-56 198
MS.gene055787.t1 MTR_3g103960 55.769 156 64 3 30 180 2 157 1.40e-54 182
MS.gene055787.t1 MTR_1g050438 64.348 115 41 0 73 187 224 338 9.36e-52 182
MS.gene055787.t1 MTR_0728s0020 64.348 115 41 0 73 187 240 354 1.96e-51 182
MS.gene055787.t1 MTR_5g071070 61.207 116 45 0 73 188 144 259 3.48e-51 182
MS.gene055787.t1 MTR_5g082830 64.957 117 39 1 73 189 213 327 4.84e-51 182
MS.gene055787.t1 MTR_5g071070 61.207 116 45 0 73 188 226 341 1.43e-50 181
MS.gene055787.t1 MTR_1g075890 61.207 116 45 0 73 188 225 340 3.10e-49 177
MS.gene055787.t1 MTR_3g435680 61.207 116 45 0 73 188 147 262 1.58e-48 170
MS.gene055787.t1 MTR_3g070880 56.034 116 51 0 73 188 159 274 7.94e-45 162
MS.gene055787.t1 MTR_3g435590 59.813 107 43 0 73 179 234 340 1.15e-43 159
MS.gene055787.t1 MTR_3g464270 50.877 114 55 1 76 188 8 121 1.10e-36 137
MS.gene055787.t1 MTR_3g464260 62.162 74 28 0 108 181 212 285 2.31e-29 120
MS.gene055787.t1 MTR_3g464290 55.814 86 37 1 73 157 96 181 3.13e-29 119
MS.gene055787.t1 MTR_3g464280 40.179 112 33 1 70 181 181 258 3.30e-21 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055787.t1 AT1G03790 46.429 364 135 12 66 411 71 392 5.48e-86 267
MS.gene055787.t1 AT5G44260 42.569 397 181 12 30 411 16 380 1.38e-77 245
MS.gene055787.t1 AT2G19810 70.803 137 30 1 56 182 47 183 1.45e-70 226
MS.gene055787.t1 AT4G29190 33.496 409 193 10 24 412 7 356 8.90e-69 222
MS.gene055787.t1 AT2G25900 74.561 114 29 0 71 184 84 197 3.50e-65 211
MS.gene055787.t1 AT2G25900 74.561 114 29 0 71 184 84 197 3.50e-65 211
MS.gene055787.t1 AT2G41900 67.241 116 38 0 73 188 257 372 3.49e-56 197
MS.gene055787.t1 AT5G58620 66.957 115 37 1 73 186 205 319 2.85e-54 190
MS.gene055787.t1 AT5G07500 68.182 110 35 0 70 179 45 154 1.76e-52 176
MS.gene055787.t1 AT5G12850 65.217 115 39 1 73 186 253 367 4.77e-52 185
MS.gene055787.t1 AT3G55980 38.976 254 102 5 28 270 156 367 3.41e-49 176
MS.gene055787.t1 AT2G40140 40.851 235 90 6 73 293 210 409 6.66e-49 175
MS.gene055787.t1 AT2G40140 40.851 235 90 6 73 293 210 409 6.66e-49 175
MS.gene055787.t1 AT3G55980 38.976 254 102 5 28 270 223 434 9.73e-49 176

Find 82 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCGGGTGAGGAGCTTTCT+TGG 0.183749 2.1:-10362831 None:intergenic
AGACATGCTTATTGATCTTT+TGG 0.193333 2.1:+10363568 MS.gene055787:CDS
CATTGTGTGGGAGGAACTTT+TGG 0.221739 2.1:-10362899 None:intergenic
GTTGGTGGTGGTGACGTTAA+TGG 0.315506 2.1:+10363896 MS.gene055787:CDS
GAGGGATGTCGATGTCTCTA+AGG 0.318194 2.1:-10362809 None:intergenic
AAACAGCGACAATATTAATA+AGG 0.368587 2.1:+10363871 MS.gene055787:CDS
CGGTGGTGTTGCGGCGGGTG+AGG 0.397490 2.1:-10362842 None:intergenic
TCATTCACCCATCCGAGATC+AGG 0.400183 2.1:-10363935 None:intergenic
GACAATATTAATAAGGTTGT+TGG 0.414119 2.1:+10363878 MS.gene055787:CDS
TTTGGGAGAGAGAGGTTGGT+AGG 0.420760 2.1:-10362781 None:intergenic
CTCGTAGCCGGAGCCATGAC+TGG 0.421786 2.1:+10362997 MS.gene055787:CDS
CGCCGCGGTGGCTGTAACCG+TGG 0.429136 2.1:+10363110 MS.gene055787:CDS
GAAGATGATGATGATGTAAC+AGG 0.430284 2.1:-10363275 None:intergenic
CAGCCACCGCGGCGATACTC+AGG 0.436266 2.1:-10363101 None:intergenic
TCATGTCCTGCCCCTGATCT+CGG 0.442440 2.1:+10363923 MS.gene055787:CDS
GAAGATGTCGACGGCGGCGG+TGG 0.446476 2.1:-10362859 None:intergenic
AGTGCTTTAGCAGCAGAAAC+TGG 0.447660 2.1:-10363641 None:intergenic
AAGAATGAAACTTGTGTTGT+TGG 0.454570 2.1:-10362758 None:intergenic
TGTTGCTGATTCTGTTCCTC+AGG 0.458860 2.1:-10363704 None:intergenic
GGACTTTGAATTCATACATT+CGG 0.463131 2.1:-10362965 None:intergenic
CGGCGGCGGTGGTGTTGCGG+CGG 0.463780 2.1:-10362848 None:intergenic
GGCGGCGGTGGTGTTGCGGC+GGG 0.472525 2.1:-10362847 None:intergenic
GTCCTGCCCCTGATCTCGGA+TGG 0.476419 2.1:+10363927 MS.gene055787:CDS
GGAGAAGATGTCGACGGCGG+CGG 0.481474 2.1:-10362862 None:intergenic
CGGGTGAGGAGCTTTCTTGG+AGG 0.487835 2.1:-10362828 None:intergenic
CGGAAATGATCTGATGAGTA+AGG 0.490767 2.1:-10362945 None:intergenic
GGGTGAGGAGCTTTCTTGGA+GGG 0.496924 2.1:-10362827 None:intergenic
ATTAATAAGGTTGTTGGTGG+TGG 0.500154 2.1:+10363884 MS.gene055787:CDS
AGAACTGAAGCATGCAAAGA+TGG 0.503562 2.1:+10363191 MS.gene055787:CDS
TCCGCCGGTGCACTCGTAGC+CGG 0.504444 2.1:+10362985 MS.gene055787:CDS
ACACCGTTACGTGGCTTCAT+CGG 0.504782 2.1:-10363491 None:intergenic
GAACCATAGCGTGAGAGCGA+TGG 0.517489 2.1:-10363515 None:intergenic
CGACGGCGGCGGTGGTGTTG+CGG 0.519055 2.1:-10362851 None:intergenic
CGTGGCTTCATCGGAGACAT+AGG 0.522416 2.1:-10363482 None:intergenic
TCCTGCCCCTGATCTCGGAT+GGG 0.524486 2.1:+10363928 MS.gene055787:CDS
CCACGGCGGTTTCATTACTC+AGG 0.527158 2.1:+10363068 MS.gene055787:CDS
CATTCACCCATCCGAGATCA+GGG 0.528306 2.1:-10363934 None:intergenic
TTGTCGACATCATTGAAACT+TGG 0.531596 2.1:-10363812 None:intergenic
GTTCCATCGCTCTCACGCTA+TGG 0.533114 2.1:+10363512 MS.gene055787:CDS
CACTGTGGCGGTAATGGTAA+TGG 0.535187 2.1:+10363386 MS.gene055787:CDS
ATCTGATGAGTAAGGATCAT+CGG 0.544740 2.1:-10362937 None:intergenic
AATATTAATAAGGTTGTTGG+TGG 0.545047 2.1:+10363881 MS.gene055787:CDS
GCTTCAGTTCTGTATCTAGC+AGG 0.547143 2.1:-10363179 None:intergenic
GAAGGGATGAATTTCAATGA+CGG 0.555565 2.1:+10363599 MS.gene055787:CDS
GGCGGTAATGGTAATGGTAA+TGG 0.562964 2.1:+10363392 MS.gene055787:CDS
AATGAAACCGCCGTGGATCA+CGG 0.566037 2.1:-10363061 None:intergenic
AAGCTCGCCGCCGTGATCCA+CGG 0.567851 2.1:+10363051 MS.gene055787:CDS
AGTCAGTCCAGTCATGGCTC+CGG 0.569804 2.1:-10363004 None:intergenic
TGATCAAAAGATGAAGAAGA+AGG 0.576719 2.1:-10363740 None:intergenic
GGAGACATAGGTGGTGATGC+CGG 0.581592 2.1:-10363470 None:intergenic
GATACTTGTGAATTTGCTCA+TGG 0.582670 2.1:+10363134 MS.gene055787:CDS
ATGGACAGTCAGTCCAGTCA+TGG 0.586583 2.1:-10363010 None:intergenic
TGAATCTCTTGATGTTCCTG+AGG 0.587490 2.1:+10363688 MS.gene055787:CDS
AGCCACCGCGGCGATACTCA+GGG 0.587575 2.1:-10363100 None:intergenic
ACCCATCCGAGATCAGGGGC+AGG 0.589319 2.1:-10363929 None:intergenic
GACTGTCCATTCGCTCACCC+CGG 0.597229 2.1:+10363023 MS.gene055787:CDS
AGCACTTCAGATACAAAACA+TGG 0.598969 2.1:+10363658 MS.gene055787:CDS
TCTCCGATGAAGCCACGTAA+CGG 0.601715 2.1:+10363488 MS.gene055787:CDS
AGGGATGTCGATGTCTCTAA+GGG 0.602570 2.1:-10362808 None:intergenic
TCCGGCTACGAGTGCACCGG+CGG 0.607263 2.1:-10362986 None:intergenic
AGTCAGAGTCATTGTGTGGG+AGG 0.622332 2.1:-10362908 None:intergenic
TCTGAGTCAGAGTCATTGTG+TGG 0.623962 2.1:-10362912 None:intergenic
GGCTCCGGCTACGAGTGCAC+CGG 0.627207 2.1:-10362989 None:intergenic
ATGATGATGATGTAACAGGA+AGG 0.628815 2.1:-10363271 None:intergenic
TGCCCTGAGTATCGCCGCGG+TGG 0.630381 2.1:+10363098 MS.gene055787:CDS
CACGGCGGTTTCATTACTCA+GGG 0.632004 2.1:+10363069 MS.gene055787:CDS
CTGAGTCAGAGTCATTGTGT+GGG 0.635621 2.1:-10362911 None:intergenic
CAAATTCACAAGTATCGCCA+CGG 0.650826 2.1:-10363127 None:intergenic
AGCGATGGAACACCGTTACG+TGG 0.658393 2.1:-10363500 None:intergenic
GACATAGGTGGTGATGCCGG+AGG 0.666150 2.1:-10363467 None:intergenic
GTCGTCGGAGAAGATGTCGA+CGG 0.666964 2.1:-10362868 None:intergenic
GGAAGGATTCTTAATTGACG+AGG 0.669701 2.1:-10363254 None:intergenic
TGTATGAATTCAAAGTCCGC+CGG 0.674896 2.1:+10362970 MS.gene055787:CDS
GTCGGAGAAGATGTCGACGG+CGG 0.678761 2.1:-10362865 None:intergenic
ATTCACCCATCCGAGATCAG+GGG 0.681023 2.1:-10363933 None:intergenic
GGCTTCATCGGAGACATAGG+TGG 0.681714 2.1:-10363479 None:intergenic
CCTGAGTAATGAAACCGCCG+TGG 0.683137 2.1:-10363068 None:intergenic
CTCGCCGCCGTGATCCACGG+CGG 0.698305 2.1:+10363054 MS.gene055787:CDS
GCACTTCAGATACAAAACAT+GGG 0.708790 2.1:+10363659 MS.gene055787:CDS
CGCCACGGTTACAGCCACCG+CGG 0.740750 2.1:-10363112 None:intergenic
GAAACCGCCGTGGATCACGG+CGG 0.763141 2.1:-10363058 None:intergenic
GTTTGCCCTGAGTATCGCCG+CGG 0.768550 2.1:+10363095 MS.gene055787:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAATATGAACATGTTTTT+GGG + chr2.1:10363848-10363867 MS.gene055787:CDS 20.0%
! AAACAGCGACAATATTAATA+AGG + chr2.1:10363871-10363890 MS.gene055787:CDS 25.0%
! AATATTAATAAGGTTGTTGG+TGG + chr2.1:10363881-10363900 MS.gene055787:CDS 25.0%
! GACAATATTAATAAGGTTGT+TGG + chr2.1:10363878-10363897 MS.gene055787:CDS 25.0%
!! CAACAATATGAACATGTTTT+TGG + chr2.1:10363847-10363866 MS.gene055787:CDS 25.0%
AAGAATGAAACTTGTGTTGT+TGG - chr2.1:10362761-10362780 None:intergenic 30.0%
GGACTTTGAATTCATACATT+CGG - chr2.1:10362968-10362987 None:intergenic 30.0%
TGATCAAAAGATGAAGAAGA+AGG - chr2.1:10363743-10363762 None:intergenic 30.0%
! AGACATGCTTATTGATCTTT+TGG + chr2.1:10363568-10363587 MS.gene055787:CDS 30.0%
! GACATGCTTATTGATCTTTT+GGG + chr2.1:10363569-10363588 MS.gene055787:CDS 30.0%
!! ATACCAAAAAGTGTTGAAGT+TGG - chr2.1:10363431-10363450 None:intergenic 30.0%
!!! ATCTTTTGGGTTCTTTTGAA+GGG + chr2.1:10363582-10363601 MS.gene055787:CDS 30.0%
!!! ATGTCTCTAAGGGATTTTTT+GGG - chr2.1:10362801-10362820 None:intergenic 30.0%
!!! TGTTTGATTTTGAAGCAACA+TGG - chr2.1:10363349-10363368 None:intergenic 30.0%
AGCACTTCAGATACAAAACA+TGG + chr2.1:10363658-10363677 MS.gene055787:CDS 35.0%
ATCTGATGAGTAAGGATCAT+CGG - chr2.1:10362940-10362959 None:intergenic 35.0%
GAAGGGATGAATTTCAATGA+CGG + chr2.1:10363599-10363618 MS.gene055787:CDS 35.0%
GCACTTCAGATACAAAACAT+GGG + chr2.1:10363659-10363678 MS.gene055787:CDS 35.0%
TTGTCGACATCATTGAAACT+TGG - chr2.1:10363815-10363834 None:intergenic 35.0%
! ATGATGATGATGTAACAGGA+AGG - chr2.1:10363274-10363293 None:intergenic 35.0%
! ATTAATAAGGTTGTTGGTGG+TGG + chr2.1:10363884-10363903 MS.gene055787:CDS 35.0%
! GAAGATGATGATGATGTAAC+AGG - chr2.1:10363278-10363297 None:intergenic 35.0%
! GATACTTGTGAATTTGCTCA+TGG + chr2.1:10363134-10363153 MS.gene055787:CDS 35.0%
! TCTCCAACTTCAACACTTTT+TGG + chr2.1:10363425-10363444 MS.gene055787:CDS 35.0%
!!! GATCTTTTGGGTTCTTTTGA+AGG + chr2.1:10363581-10363600 MS.gene055787:CDS 35.0%
!!! GATGTCTCTAAGGGATTTTT+TGG - chr2.1:10362802-10362821 None:intergenic 35.0%
!!! TGTTGTTTGTTTTGTCACTG+TGG + chr2.1:10363371-10363390 MS.gene055787:CDS 35.0%
AGAACTGAAGCATGCAAAGA+TGG + chr2.1:10363191-10363210 MS.gene055787:CDS 40.0%
CGGAAATGATCTGATGAGTA+AGG - chr2.1:10362948-10362967 None:intergenic 40.0%
GGAAGGATTCTTAATTGACG+AGG - chr2.1:10363257-10363276 None:intergenic 40.0%
TGAATCTCTTGATGTTCCTG+AGG + chr2.1:10363688-10363707 MS.gene055787:CDS 40.0%
TGTATGAATTCAAAGTCCGC+CGG + chr2.1:10362970-10362989 MS.gene055787:CDS 40.0%
! CAAATTCACAAGTATCGCCA+CGG - chr2.1:10363130-10363149 None:intergenic 40.0%
!! CTCATGGTGTTTTTGAATGC+TGG + chr2.1:10363150-10363169 MS.gene055787:CDS 40.0%
!!! ATTTTTTGGGAGAGAGAGGT+TGG - chr2.1:10362788-10362807 None:intergenic 40.0%
!!! TGTTTGTTTTGTCACTGTGG+CGG + chr2.1:10363374-10363393 MS.gene055787:CDS 40.0%
AGGGATGTCGATGTCTCTAA+GGG - chr2.1:10362811-10362830 None:intergenic 45.0%
AGTGCTTTAGCAGCAGAAAC+TGG - chr2.1:10363644-10363663 None:intergenic 45.0%
CTGAGTCAGAGTCATTGTGT+GGG - chr2.1:10362914-10362933 None:intergenic 45.0%
GCTTCAGTTCTGTATCTAGC+AGG - chr2.1:10363182-10363201 None:intergenic 45.0%
TCTGAGTCAGAGTCATTGTG+TGG - chr2.1:10362915-10362934 None:intergenic 45.0%
! CATTGTGTGGGAGGAACTTT+TGG - chr2.1:10362902-10362921 None:intergenic 45.0%
! TTTTGTCACTGTGGCGGTAA+TGG + chr2.1:10363380-10363399 MS.gene055787:CDS 45.0%
!! GGCGGTAATGGTAATGGTAA+TGG + chr2.1:10363392-10363411 MS.gene055787:CDS 45.0%
!! GTCTCATTTTTCTTCGCCTC+CGG + chr2.1:10363451-10363470 MS.gene055787:CDS 45.0%
!! TGTTGCTGATTCTGTTCCTC+AGG - chr2.1:10363707-10363726 None:intergenic 45.0%
!!! AGGGATTTTTTGGGAGAGAG+AGG - chr2.1:10362792-10362811 None:intergenic 45.0%
AATGAAACCGCCGTGGATCA+CGG - chr2.1:10363064-10363083 None:intergenic 50.0%
ACACCGTTACGTGGCTTCAT+CGG - chr2.1:10363494-10363513 None:intergenic 50.0%
AGTCAGAGTCATTGTGTGGG+AGG - chr2.1:10362911-10362930 None:intergenic 50.0%
ATGGACAGTCAGTCCAGTCA+TGG - chr2.1:10363013-10363032 None:intergenic 50.0%
ATTCACCCATCCGAGATCAG+GGG - chr2.1:10363936-10363955 None:intergenic 50.0%
CACGGCGGTTTCATTACTCA+GGG + chr2.1:10363069-10363088 MS.gene055787:CDS 50.0%
CATTCACCCATCCGAGATCA+GGG - chr2.1:10363937-10363956 None:intergenic 50.0%
GAGGGATGTCGATGTCTCTA+AGG - chr2.1:10362812-10362831 None:intergenic 50.0%
TCATTCACCCATCCGAGATC+AGG - chr2.1:10363938-10363957 None:intergenic 50.0%
TCTCCGATGAAGCCACGTAA+CGG + chr2.1:10363488-10363507 MS.gene055787:CDS 50.0%
! CACTGTGGCGGTAATGGTAA+TGG + chr2.1:10363386-10363405 MS.gene055787:CDS 50.0%
! TGTGTGGGAGGAACTTTTGG+AGG - chr2.1:10362899-10362918 None:intergenic 50.0%
! TTTGGGAGAGAGAGGTTGGT+AGG - chr2.1:10362784-10362803 None:intergenic 50.0%
!! GTTGGTGGTGGTGACGTTAA+TGG + chr2.1:10363896-10363915 MS.gene055787:CDS 50.0%
!! TGGGAGGAACTTTTGGAGGA+TGG - chr2.1:10362895-10362914 None:intergenic 50.0%
!!! CTTTTGGAGGATGGTGTCGT+CGG - chr2.1:10362886-10362905 None:intergenic 50.0%
AGCGATGGAACACCGTTACG+TGG - chr2.1:10363503-10363522 None:intergenic 55.0%
AGTCAGTCCAGTCATGGCTC+CGG - chr2.1:10363007-10363026 None:intergenic 55.0%
CCACGGCGGTTTCATTACTC+AGG + chr2.1:10363068-10363087 MS.gene055787:CDS 55.0%
CCTGAGTAATGAAACCGCCG+TGG - chr2.1:10363071-10363090 None:intergenic 55.0%
CGTGGCTTCATCGGAGACAT+AGG - chr2.1:10363485-10363504 None:intergenic 55.0%
GAACCATAGCGTGAGAGCGA+TGG - chr2.1:10363518-10363537 None:intergenic 55.0%
GGCTTCATCGGAGACATAGG+TGG - chr2.1:10363482-10363501 None:intergenic 55.0%
GGGTGAGGAGCTTTCTTGGA+GGG - chr2.1:10362830-10362849 None:intergenic 55.0%
GTCGTCGGAGAAGATGTCGA+CGG - chr2.1:10362871-10362890 None:intergenic 55.0%
GTTCCATCGCTCTCACGCTA+TGG + chr2.1:10363512-10363531 MS.gene055787:CDS 55.0%
TCATGTCCTGCCCCTGATCT+CGG + chr2.1:10363923-10363942 MS.gene055787:CDS 55.0%
! GGAGACATAGGTGGTGATGC+CGG - chr2.1:10363473-10363492 None:intergenic 55.0%
! TTTTCACCGGGGTGAGCGAA+TGG - chr2.1:10363032-10363051 None:intergenic 55.0%
CGGGTGAGGAGCTTTCTTGG+AGG - chr2.1:10362831-10362850 None:intergenic 60.0%
GACTGTCCATTCGCTCACCC+CGG + chr2.1:10363023-10363042 MS.gene055787:CDS 60.0%
GTCGGAGAAGATGTCGACGG+CGG - chr2.1:10362868-10362887 None:intergenic 60.0%
TCCTGCCCCTGATCTCGGAT+GGG + chr2.1:10363928-10363947 MS.gene055787:CDS 60.0%
! GACATAGGTGGTGATGCCGG+AGG - chr2.1:10363470-10363489 None:intergenic 60.0%
! GTTTGCCCTGAGTATCGCCG+CGG + chr2.1:10363095-10363114 MS.gene055787:CDS 60.0%
!!! ACGGCGGCGAGCTTTTTCAC+CGG - chr2.1:10363045-10363064 None:intergenic 60.0%
AAGCTCGCCGCCGTGATCCA+CGG + chr2.1:10363051-10363070 MS.gene055787:CDS 65.0%
ACCCATCCGAGATCAGGGGC+AGG - chr2.1:10363932-10363951 None:intergenic 65.0%
AGCCACCGCGGCGATACTCA+GGG - chr2.1:10363103-10363122 None:intergenic 65.0%
CGGCGGGTGAGGAGCTTTCT+TGG - chr2.1:10362834-10362853 None:intergenic 65.0%
CTCGTAGCCGGAGCCATGAC+TGG + chr2.1:10362997-10363016 MS.gene055787:CDS 65.0%
GAAACCGCCGTGGATCACGG+CGG - chr2.1:10363061-10363080 None:intergenic 65.0%
GGAGAAGATGTCGACGGCGG+CGG - chr2.1:10362865-10362884 None:intergenic 65.0%
GTCCTGCCCCTGATCTCGGA+TGG + chr2.1:10363927-10363946 MS.gene055787:CDS 65.0%
!!! CGGCGGCGAGCTTTTTCACC+GGG - chr2.1:10363044-10363063 None:intergenic 65.0%
!!! GGCGGCGAGCTTTTTCACCG+GGG - chr2.1:10363043-10363062 None:intergenic 65.0%
CAGCCACCGCGGCGATACTC+AGG - chr2.1:10363104-10363123 None:intergenic 70.0%
CGCCACGGTTACAGCCACCG+CGG - chr2.1:10363115-10363134 None:intergenic 70.0%
GAAGATGTCGACGGCGGCGG+TGG - chr2.1:10362862-10362881 None:intergenic 70.0%
GGCTCCGGCTACGAGTGCAC+CGG - chr2.1:10362992-10363011 None:intergenic 70.0%
TCCGCCGGTGCACTCGTAGC+CGG + chr2.1:10362985-10363004 MS.gene055787:CDS 70.0%
TCCGGCTACGAGTGCACCGG+CGG - chr2.1:10362989-10363008 None:intergenic 70.0%
! TGCCCTGAGTATCGCCGCGG+TGG + chr2.1:10363098-10363117 MS.gene055787:CDS 70.0%
CGCCGCGGTGGCTGTAACCG+TGG + chr2.1:10363110-10363129 MS.gene055787:CDS 75.0%
CTCGCCGCCGTGATCCACGG+CGG + chr2.1:10363054-10363073 MS.gene055787:CDS 75.0%
! CGACGGCGGCGGTGGTGTTG+CGG - chr2.1:10362854-10362873 None:intergenic 75.0%
!! CGGTGGTGTTGCGGCGGGTG+AGG - chr2.1:10362845-10362864 None:intergenic 75.0%
!!! CGGCGGCGGTGGTGTTGCGG+CGG - chr2.1:10362851-10362870 None:intergenic 80.0%
!!! GGCGGCGGTGGTGTTGCGGC+GGG - chr2.1:10362850-10362869 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 10362732 10363970 10362732 ID=MS.gene055787
chr2.1 mRNA 10362732 10363970 10362732 ID=MS.gene055787.t1;Parent=MS.gene055787
chr2.1 exon 10362732 10363970 10362732 ID=MS.gene055787.t1.exon1;Parent=MS.gene055787.t1
chr2.1 CDS 10362732 10363970 10362732 ID=cds.MS.gene055787.t1;Parent=MS.gene055787.t1
Gene Sequence

>MS.gene055787

ATGACTACTATTTGTGCTGAACAACACCAACAACACAAGTTTCATTCTTCCTACCAACCTCTCTCTCCCAAAAAATCCCTTAGAGACATCGACATCCCTCCAAGAAAGCTCCTCACCCGCCGCAACACCACCGCCGCCGTCGACATCTTCTCCGACGACACCATCCTCCAAAAGTTCCTCCCACACAATGACTCTGACTCAGACTCCGATGATCCTTACTCATCAGATCATTTCCGAATGTATGAATTCAAAGTCCGCCGGTGCACTCGTAGCCGGAGCCATGACTGGACTGACTGTCCATTCGCTCACCCCGGTGAAAAAGCTCGCCGCCGTGATCCACGGCGGTTTCATTACTCAGGGACAGTTTGCCCTGAGTATCGCCGCGGTGGCTGTAACCGTGGCGATACTTGTGAATTTGCTCATGGTGTTTTTGAATGCTGGCTTCATCCTGCTAGATACAGAACTGAAGCATGCAAAGATGGTAAAAACTGTAAGAGAAAAGTTTGTTTCTTTGCACACACTCCTCGTCAATTAAGAATCCTTCCTGTTACATCATCATCATCTTCAAATGAACATTTTTCATGCAACAAGAAAAATAACAAGCTTTTGAATAACCATGTTGCTTCAAAATCAAACAATTGTTGTTTGTTTTGTCACTGTGGCGGTAATGGTAATGGTAATGGTGCTAATAATTCTCCAACTTCAACACTTTTTGGTATGTCTCATTTTTCTTCGCCTCCGGCATCACCACCTATGTCTCCGATGAAGCCACGTAACGGTGTTCCATCGCTCTCACGCTATGGTTCTTCGATTAATAGTAACAATCTTCGTTATAGAGACATGCTTATTGATCTTTTGGGTTCTTTTGAAGGGATGAATTTCAATGACGGTTCATCTTCTTCTTCTTCACCAGTTTCTGCTGCTAAAGCACTTCAGATACAAAACATGGGTTATCTTGAATCTCTTGATGTTCCTGAGGAACAGAATCAGCAACAGTTTATTGTTTCACCTTCTTCTTCATCTTTTGATCATCAACAACATTTCAATATTCTTTCACAATCTATTCATCAGAATTTGACACCAAGTTTCAATGATGTCGACAATAACATCATTAACAACAATATGAACATGTTTTTGGGAAACAGCGACAATATTAATAAGGTTGTTGGTGGTGGTGACGTTAATGGTTTGTCATGTCCTGCCCCTGATCTCGGATGGGTGAATGAATTGCTGATGTAG
Protein sequence

>MS.gene055787.t1

MTTICAEQHQQHKFHSSYQPLSPKKSLRDIDIPPRKLLTRRNTTAAVDIFSDDTILQKFLPHNDSDSDSDDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTVCPEYRRGGCNRGDTCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHTPRQLRILPVTSSSSSNEHFSCNKKNNKLLNNHVASKSNNCCLFCHCGGNGNGNGANNSPTSTLFGMSHFSSPPASPPMSPMKPRNGVPSLSRYGSSINSNNLRYRDMLIDLLGSFEGMNFNDGSSSSSSPVSAAKALQIQNMGYLESLDVPEEQNQQQFIVSPSSSSFDHQQHFNILSQSIHQNLTPSFNDVDNNIINNNMNMFLGNSDNINKVVGGGDVNGLSCPAPDLGWVNELLM