Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66410.t1 | XP_003620792.1 | 100 | 94 | 0 | 0 | 246 | 339 | 68 | 161 | 8.50E-48 | 201.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66410.t1 | P82412 | 89.4 | 94 | 10 | 0 | 246 | 339 | 86 | 179 | 3.4e-45 | 183.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66410.t1 | B7FMM7 | 100.0 | 94 | 0 | 0 | 246 | 339 | 68 | 161 | 6.1e-48 | 201.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene66410 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene66410 | 0.814866 | 1.24E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene66410 | 0.804543 | 2.05E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene66410 | 0.813959 | 1.97E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene66410 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene050330 | MS.gene66410 | -0.80323 | 3.85E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene66410 | 0.80555 | 1.26E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene66410 | 0.805984 | 1.03E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene66410 | 0.837033 | 6.60E-57 | -1.69E-46 |
| MS.gene052302 | MS.gene66410 | 0.819509 | 1.12E-52 | -1.69E-46 |
| MS.gene052376 | MS.gene66410 | 0.828565 | 8.38E-55 | -1.69E-46 |
| MS.gene052389 | MS.gene66410 | 0.814955 | 1.18E-51 | -1.69E-46 |
| MS.gene052464 | MS.gene66410 | 0.815681 | 8.16E-52 | -1.69E-46 |
| MS.gene052856 | MS.gene66410 | 0.81794 | 2.54E-52 | -1.69E-46 |
| MS.gene052858 | MS.gene66410 | 0.807863 | 4.11E-50 | -1.69E-46 |
| MS.gene052860 | MS.gene66410 | 0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene053085 | MS.gene66410 | 0.809516 | 1.82E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene66410 | 0.80136 | 9.34E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene66410 | 0.835652 | 1.48E-56 | -1.69E-46 |
| MS.gene056875 | MS.gene66410 | 0.820021 | 8.55E-53 | -1.69E-46 |
| MS.gene057200 | MS.gene66410 | 0.800397 | 1.47E-48 | -1.69E-46 |
| MS.gene057260 | MS.gene66410 | 0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene060480 | MS.gene66410 | 0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene060918 | MS.gene66410 | 0.814367 | 1.60E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene66410 | 0.800354 | 1.50E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene66410 | -0.806881 | 6.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66410.t1 | MTR_6g090520 | 100.000 | 94 | 0 | 0 | 246 | 339 | 68 | 161 | 1.38e-64 | 202 |
| MS.gene66410.t1 | MTR_3g040400 | 31.667 | 180 | 113 | 1 | 64 | 243 | 50 | 219 | 1.97e-27 | 108 |
| MS.gene66410.t1 | MTR_4g108570 | 30.556 | 180 | 115 | 1 | 64 | 243 | 47 | 216 | 6.50e-25 | 101 |
| MS.gene66410.t1 | MTR_4g108570 | 30.556 | 180 | 115 | 1 | 64 | 243 | 47 | 216 | 8.02e-25 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66410.t1 | AT1G68590 | 84.444 | 90 | 14 | 0 | 250 | 339 | 76 | 165 | 9.26e-53 | 172 |
| MS.gene66410.t1 | AT1G68590 | 82.222 | 90 | 16 | 0 | 250 | 339 | 73 | 162 | 7.84e-52 | 169 |
| MS.gene66410.t1 | AT5G15760 | 75.269 | 93 | 23 | 0 | 246 | 338 | 91 | 183 | 7.87e-47 | 157 |
| MS.gene66410.t1 | AT1G74560 | 35.484 | 186 | 104 | 5 | 64 | 245 | 52 | 225 | 6.27e-28 | 109 |
| MS.gene66410.t1 | AT1G18800 | 32.620 | 187 | 108 | 3 | 64 | 245 | 48 | 221 | 6.09e-26 | 104 |
| MS.gene66410.t1 | AT1G74560 | 35.593 | 177 | 98 | 5 | 64 | 236 | 52 | 216 | 3.61e-25 | 102 |
Find 75 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCAACCTCTTTGGCTTCT+TGG | 0.078338 | 6.3:-82709398 | None:intergenic |
| CTCCTTGATAATTTCAGATT+TGG | 0.207017 | 6.3:-82709477 | None:intergenic |
| CTCTAAGCCCTTATTACTTT+TGG | 0.215786 | 6.3:+82715659 | MS.gene66410:CDS |
| TTCCTTGGCCAAAAGTAATA+AGG | 0.216981 | 6.3:-82715667 | None:intergenic |
| GCCCTTGGGTCCAACCTCTT+TGG | 0.250124 | 6.3:-82709406 | None:intergenic |
| CTTTGGCTTCTTGGTCTTGA+AGG | 0.252096 | 6.3:-82709389 | None:intergenic |
| TCCTTGATAATTTCAGATTT+GGG | 0.269572 | 6.3:-82709476 | None:intergenic |
| ATATCATCAAATATGAAGTA+TGG | 0.306582 | 6.3:+82712063 | MS.gene66410:CDS |
| TTTGACCGATTTGGATATAA+AGG | 0.307928 | 6.3:+82710098 | MS.gene66410:CDS |
| AAACATGAAGAAGGAGAAAA+AGG | 0.310317 | 6.3:+82711336 | MS.gene66410:CDS |
| TCACTACGCTCATCACAAAT+AGG | 0.313432 | 6.3:-82709908 | None:intergenic |
| GGACTTAGATCAGAAGTATA+TGG | 0.327807 | 6.3:+82709874 | MS.gene66410:CDS |
| AACCCAACGGTACATCAAAA+AGG | 0.344405 | 6.3:+82709526 | MS.gene66410:CDS |
| GCGTGAAAAGGAACGCAAAA+AGG | 0.353626 | 6.3:+82711754 | MS.gene66410:CDS |
| TCCTTGGCCAAAAGTAATAA+GGG | 0.369106 | 6.3:-82715666 | None:intergenic |
| ACTCCCTTCTTAATTGCCCT+TGG | 0.384026 | 6.3:-82709421 | None:intergenic |
| CTCCCTTCTTAATTGCCCTT+GGG | 0.387069 | 6.3:-82709420 | None:intergenic |
| GACTTGTGTTGAAGTTCATT+TGG | 0.387551 | 6.3:+82715578 | MS.gene66410:CDS |
| GATAATTTCAGATTTGGGTT+TGG | 0.397512 | 6.3:-82709471 | None:intergenic |
| GAATAAACTCACAAATGAAA+TGG | 0.403761 | 6.3:-82711364 | None:intergenic |
| CAAAAGTAATAAGGGCTTAG+AGG | 0.406041 | 6.3:-82715658 | None:intergenic |
| ATGGAAAAGAACATTGGTAT+TGG | 0.418344 | 6.3:+82715601 | MS.gene66410:CDS |
| TCTTCCCAAGCATCTTTCCT+TGG | 0.419427 | 6.3:-82715682 | None:intergenic |
| TGTAGGATATTGAAGTGAAA+AGG | 0.426228 | 6.3:+82709840 | MS.gene66410:intron |
| AATGTAACTTCTATCAATGT+TGG | 0.436746 | 6.3:+82711312 | MS.gene66410:CDS |
| CCACTGATATTATCAATTTG+TGG | 0.436998 | 6.3:+82715773 | MS.gene66410:CDS |
| ATGAACTTCAACACAAGTCT+TGG | 0.442603 | 6.3:-82715574 | None:intergenic |
| ATCAGAAGTATATGGAGATA+AGG | 0.454949 | 6.3:+82709882 | MS.gene66410:CDS |
| TGAACTCATTGAAGTTGAAA+AGG | 0.455566 | 6.3:+82711706 | MS.gene66410:CDS |
| ATGAACCATCCTAAATTGAA+AGG | 0.459117 | 6.3:+82710072 | MS.gene66410:CDS |
| AGTTGAAAAGGAAGTTGAAA+AGG | 0.466864 | 6.3:+82711718 | MS.gene66410:CDS |
| TTGGCCAAGGAAAGATGCTT+GGG | 0.477445 | 6.3:+82715678 | MS.gene66410:CDS |
| ATGAATGCAGCTTCTTTGAC+TGG | 0.478327 | 6.3:+82711862 | MS.gene66410:intron |
| TCATACCTTTATATCCAAAT+CGG | 0.479930 | 6.3:-82710103 | None:intergenic |
| ACAAGTCTTGGTTTGTCAGT+TGG | 0.483207 | 6.3:-82715562 | None:intergenic |
| TTTGGCCAAGGAAAGATGCT+TGG | 0.483605 | 6.3:+82715677 | MS.gene66410:CDS |
| TGAAATTATCAAGGAGGAAG+AGG | 0.493893 | 6.3:+82709484 | MS.gene66410:CDS |
| TGAACCATCCTAAATTGAAA+GGG | 0.496044 | 6.3:+82710073 | MS.gene66410:CDS |
| GGACCCAAGGGCAATTAAGA+AGG | 0.496369 | 6.3:+82709417 | MS.gene66410:CDS |
| TGTGTTGAAGTTCATTTGGA+TGG | 0.501955 | 6.3:+82715582 | MS.gene66410:CDS |
| GACCAAGAAGCCAAAGAGGT+TGG | 0.505561 | 6.3:+82709396 | MS.gene66410:CDS |
| TCCTACATTTGAACCTTAGG+AGG | 0.511230 | 6.3:-82715818 | None:intergenic |
| ACCCAAATCTGAAATTATCA+AGG | 0.512702 | 6.3:+82709475 | MS.gene66410:CDS |
| GGCGGTAACTTGTCCTCCTA+AGG | 0.512787 | 6.3:+82715805 | MS.gene66410:CDS |
| ATGAGTTGATTCATAAGAGT+GGG | 0.515180 | 6.3:+82711898 | MS.gene66410:CDS |
| AGTTGCTAGAGAGTAAGCCT+TGG | 0.524129 | 6.3:+82715713 | MS.gene66410:CDS |
| AAAACCCTTTCAATTTAGGA+TGG | 0.527244 | 6.3:-82710077 | None:intergenic |
| AGCCAAAGAGGTTGGACCCA+AGG | 0.527253 | 6.3:+82709404 | MS.gene66410:CDS |
| AGAGGAATGGTTCCATGGCC+AGG | 0.528465 | 6.3:-82715640 | None:intergenic |
| AATGTTGGAAAACATGAAGA+AGG | 0.537937 | 6.3:+82711327 | MS.gene66410:CDS |
| GCCAAAGAGGTTGGACCCAA+GGG | 0.538608 | 6.3:+82709405 | MS.gene66410:CDS |
| ATTTGGATGGAAAAGAACAT+TGG | 0.539555 | 6.3:+82715595 | MS.gene66410:CDS |
| GTAATAAGGGCTTAGAGGAA+TGG | 0.544994 | 6.3:-82715653 | None:intergenic |
| AGATGCTTGGGAAGAGCTCA+AGG | 0.550724 | 6.3:+82715690 | MS.gene66410:CDS |
| TATCATCAAATATGAAGTAT+GGG | 0.554315 | 6.3:+82712064 | MS.gene66410:CDS |
| TATGAAGTATGGGATGATCC+TGG | 0.572981 | 6.3:+82712074 | MS.gene66410:CDS |
| GTTGCTGTGCTGTAGAAGCT+AGG | 0.574501 | 6.3:+82715526 | MS.gene66410:intron |
| GGCTTAGAGGAATGGTTCCA+TGG | 0.575688 | 6.3:-82715645 | None:intergenic |
| AATGAGTTGATTCATAAGAG+TGG | 0.578667 | 6.3:+82711897 | MS.gene66410:CDS |
| ATGATATGTTTAAAACCCAA+CGG | 0.597676 | 6.3:+82709513 | MS.gene66410:CDS |
| AGGGCAATTAAGAAGGGAGT+CGG | 0.600587 | 6.3:+82709424 | MS.gene66410:CDS |
| TCAAGACCAAGAAGCCAAAG+AGG | 0.603035 | 6.3:+82709392 | MS.gene66410:CDS |
| GATCAAATGATACCTGGCCA+TGG | 0.607979 | 6.3:+82715628 | MS.gene66410:CDS |
| GACCCAAGGGCAATTAAGAA+GGG | 0.608471 | 6.3:+82709418 | MS.gene66410:CDS |
| GGACTTGATCAAATGATACC+TGG | 0.609762 | 6.3:+82715622 | MS.gene66410:CDS |
| CCACAAATTGATAATATCAG+TGG | 0.611414 | 6.3:-82715773 | None:intergenic |
| TAAGAGTGGGGATAGAGATG+AGG | 0.623590 | 6.3:+82711911 | MS.gene66410:CDS |
| GTGTCTCAAAGAAACTGCGG+TGG | 0.644095 | 6.3:+82711564 | MS.gene66410:CDS |
| ATCAATTTGTGGCAGCAGAG+CGG | 0.648603 | 6.3:+82715784 | MS.gene66410:CDS |
| AATTTGTGGCAGCAGAGCGG+CGG | 0.660943 | 6.3:+82715787 | MS.gene66410:CDS |
| ACATTGTAATAATAACGACC+AGG | 0.675740 | 6.3:-82712092 | None:intergenic |
| CAAATCTGAAATTATCAAGG+AGG | 0.680108 | 6.3:+82709478 | MS.gene66410:CDS |
| TGAGTTGATTCATAAGAGTG+GGG | 0.689070 | 6.3:+82711899 | MS.gene66410:CDS |
| TGTGCTGTAGAAGCTAGGAG+TGG | 0.708272 | 6.3:+82715531 | MS.gene66410:intron |
| TCAGTGTCTCAAAGAAACTG+CGG | 0.729351 | 6.3:+82711561 | MS.gene66410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATAAAAGAAAATAA+TGG | - | chr6.3:82712605-82712624 | None:intergenic | 10.0% |
| !! | AAGAATTGATTATTTAAATA+AGG | + | chr6.3:82713575-82713594 | MS.gene66410:intron | 10.0% |
| !! | GAAAAAAAAAACATATATAT+TGG | - | chr6.3:82710904-82710923 | None:intergenic | 10.0% |
| !!! | ATTATTTTCTTTTATTCTTT+TGG | + | chr6.3:82712604-82712623 | MS.gene66410:intron | 10.0% |
| !!! | TATTTACTCTTTATTTTTTT+TGG | + | chr6.3:82714076-82714095 | MS.gene66410:intron | 10.0% |
| !!! | TCATTTAACTAAATAATTTT+AGG | - | chr6.3:82711434-82711453 | None:intergenic | 10.0% |
| !!! | TTTGATTTCTTATAATTTTT+CGG | - | chr6.3:82714253-82714272 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTCTTAAAAAAAA+TGG | - | chr6.3:82713043-82713062 | None:intergenic | 10.0% |
| !! | AAGGTAAAATTATTTATGTT+TGG | + | chr6.3:82714911-82714930 | MS.gene66410:intron | 15.0% |
| !! | AGCAAATATCTATAAAATAA+AGG | - | chr6.3:82711292-82711311 | None:intergenic | 15.0% |
| !! | ATGAAATTGAAATAGAAAAA+AGG | - | chr6.3:82710870-82710889 | None:intergenic | 15.0% |
| !! | GAAAATTAATAAATAGCTAA+TGG | - | chr6.3:82709561-82709580 | None:intergenic | 15.0% |
| !! | GCAAATATCTATAAAATAAA+GGG | - | chr6.3:82711291-82711310 | None:intergenic | 15.0% |
| !! | GTTAAAACAAAACTAAATAT+AGG | + | chr6.3:82709610-82709629 | MS.gene66410:intron | 15.0% |
| !!! | AATATAATTCTCTTCTATTT+TGG | + | chr6.3:82713385-82713404 | MS.gene66410:intron | 15.0% |
| !!! | ATATAATTCTCTTCTATTTT+GGG | + | chr6.3:82713386-82713405 | MS.gene66410:intron | 15.0% |
| !!! | ATTTATCTTTTTTTTGTCAA+GGG | - | chr6.3:82714214-82714233 | None:intergenic | 15.0% |
| !!! | ATTTTCATATTCGTTTTTTA+TGG | - | chr6.3:82713525-82713544 | None:intergenic | 15.0% |
| !!! | CAAAATCAATTTTATGTTTA+AGG | + | chr6.3:82715317-82715336 | MS.gene66410:intron | 15.0% |
| !!! | TTCATACATAAGTTTTAAAT+TGG | - | chr6.3:82713881-82713900 | None:intergenic | 15.0% |
| !! | AAACAAAACTAAATATAGGT+TGG | + | chr6.3:82709614-82709633 | MS.gene66410:intron | 20.0% |
| !! | AAACTTATGTATGAAATTTG+AGG | + | chr6.3:82713886-82713905 | MS.gene66410:intron | 20.0% |
| !! | AACTTATGTATGAAATTTGA+GGG | + | chr6.3:82713887-82713906 | MS.gene66410:intron | 20.0% |
| !! | AATGAACAATAAAGATGTTA+TGG | + | chr6.3:82712390-82712409 | MS.gene66410:intron | 20.0% |
| !! | ACAAACAATTATGTATTTAG+TGG | + | chr6.3:82712939-82712958 | MS.gene66410:intron | 20.0% |
| !! | ATATCATCAAATATGAAGTA+TGG | + | chr6.3:82712063-82712082 | MS.gene66410:CDS | 20.0% |
| !! | ATTTAATTGCCCTATATTTA+TGG | - | chr6.3:82710774-82710793 | None:intergenic | 20.0% |
| !! | ATTTCAATGAAAATGCTTAA+AGG | + | chr6.3:82714732-82714751 | MS.gene66410:intron | 20.0% |
| !! | GGATATATTTATGTAAAAGT+AGG | + | chr6.3:82714932-82714951 | MS.gene66410:intron | 20.0% |
| !! | TAAAGAACTTATATTATGCT+TGG | - | chr6.3:82715468-82715487 | None:intergenic | 20.0% |
| !! | TACTTTCAAATTTAACACTT+AGG | + | chr6.3:82713840-82713859 | MS.gene66410:intron | 20.0% |
| !! | TATCATCAAATATGAAGTAT+GGG | + | chr6.3:82712064-82712083 | MS.gene66410:CDS | 20.0% |
| !! | TATTAGAATGAATTCACTAT+GGG | + | chr6.3:82712778-82712797 | MS.gene66410:intron | 20.0% |
| !! | TCATATTGTCCATAAATATA+GGG | + | chr6.3:82710762-82710781 | MS.gene66410:intron | 20.0% |
| !! | TCTTATGAATTATCTGTAAT+TGG | + | chr6.3:82709760-82709779 | MS.gene66410:intron | 20.0% |
| !! | TTAAACAGCCAATATTATTA+AGG | + | chr6.3:82710159-82710178 | MS.gene66410:intron | 20.0% |
| !! | TTAAAGTTTCGAAAATTTCA+GGG | - | chr6.3:82713819-82713838 | None:intergenic | 20.0% |
| !! | TTAACATAAGATTCTATTAG+AGG | - | chr6.3:82711669-82711688 | None:intergenic | 20.0% |
| !! | TTATGTATTTAGTGGAAATA+AGG | + | chr6.3:82712947-82712966 | MS.gene66410:intron | 20.0% |
| !! | TTATTAGAATGAATTCACTA+TGG | + | chr6.3:82712777-82712796 | MS.gene66410:intron | 20.0% |
| !! | TTTCAATGAAAATGCTTAAA+GGG | + | chr6.3:82714733-82714752 | MS.gene66410:intron | 20.0% |
| !!! | AAGTGTTGTAAATTTCATTT+AGG | + | chr6.3:82709989-82710008 | MS.gene66410:intron | 20.0% |
| !!! | AATATTTTCTCTCAAAACTT+GGG | + | chr6.3:82710563-82710582 | MS.gene66410:intron | 20.0% |
| !!! | ACATAAGTTTTAAATTGGAA+GGG | - | chr6.3:82713876-82713895 | None:intergenic | 20.0% |
| !!! | AGCTAAGGTTTTAATATAAT+TGG | - | chr6.3:82712295-82712314 | None:intergenic | 20.0% |
| !!! | ATATAAAGGTATGACTTTTT+TGG | + | chr6.3:82710112-82710131 | MS.gene66410:intron | 20.0% |
| !!! | ATGAAATTTTAGTGTATGTT+TGG | + | chr6.3:82714827-82714846 | MS.gene66410:intron | 20.0% |
| !!! | CATTTTATTTACTATAGCTA+AGG | - | chr6.3:82712310-82712329 | None:intergenic | 20.0% |
| !!! | GATTTATCTTTTTTTTGTCA+AGG | - | chr6.3:82714215-82714234 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTCTCTTATGT+TGG | + | chr6.3:82710912-82710931 | MS.gene66410:intron | 20.0% |
| !!! | TAAAAAAGATTCCTTTTTTC+TGG | + | chr6.3:82709936-82709955 | MS.gene66410:CDS | 20.0% |
| !!! | TAATTCTAAGTTTGTTTCAA+AGG | + | chr6.3:82714688-82714707 | MS.gene66410:intron | 20.0% |
| !!! | TACATAAGTTTTAAATTGGA+AGG | - | chr6.3:82713877-82713896 | None:intergenic | 20.0% |
| !!! | TATGATTAAAATTGAGTTGA+AGG | + | chr6.3:82714892-82714911 | MS.gene66410:intron | 20.0% |
| !!! | TCTATTTGTTACCAAAAAAA+TGG | + | chr6.3:82712805-82712824 | MS.gene66410:intron | 20.0% |
| !!! | TTACTCTTTATTTTTTTTGG+CGG | + | chr6.3:82714079-82714098 | MS.gene66410:intron | 20.0% |
| !!! | TTTAAAGTTTCGAAAATTTC+AGG | - | chr6.3:82713820-82713839 | None:intergenic | 20.0% |
| ! | AAAGTTTCAAAATTTGCATG+AGG | + | chr6.3:82714014-82714033 | MS.gene66410:intron | 25.0% |
| ! | AAGTTTCAAAATTTGCATGA+GGG | + | chr6.3:82714015-82714034 | MS.gene66410:intron | 25.0% |
| ! | AATCCATAACTTCTCTTATT+TGG | - | chr6.3:82710740-82710759 | None:intergenic | 25.0% |
| ! | AATGTAACTTCTATCAATGT+TGG | + | chr6.3:82711312-82711331 | MS.gene66410:CDS | 25.0% |
| ! | AATTGTGAAAATTTCCTTAG+TGG | + | chr6.3:82712430-82712449 | MS.gene66410:intron | 25.0% |
| ! | ACTTATGTATGAAATTTGAG+GGG | + | chr6.3:82713888-82713907 | MS.gene66410:intron | 25.0% |
| ! | AGCAATCCAGTTAATTAAAT+TGG | - | chr6.3:82709679-82709698 | None:intergenic | 25.0% |
| ! | AGTATTTGACAATTTCAAAG+AGG | - | chr6.3:82713637-82713656 | None:intergenic | 25.0% |
| ! | ATCAAGGGTAATTAACTAAT+TGG | - | chr6.3:82710517-82710536 | None:intergenic | 25.0% |
| ! | ATGAACTATGAAAAATAGAG+TGG | - | chr6.3:82713360-82713379 | None:intergenic | 25.0% |
| ! | ATTCATCAGATATATATGAC+TGG | - | chr6.3:82711207-82711226 | None:intergenic | 25.0% |
| ! | ATTCTCTAAATTGTAGTTTG+CGG | + | chr6.3:82712040-82712059 | MS.gene66410:intron | 25.0% |
| ! | ATTTAGTGGAAATAAGGTAA+AGG | + | chr6.3:82712953-82712972 | MS.gene66410:intron | 25.0% |
| ! | CAATAAACGACATTACATTT+AGG | + | chr6.3:82709585-82709604 | MS.gene66410:intron | 25.0% |
| ! | CAATATCATAAGTGTAATTC+TGG | - | chr6.3:82715108-82715127 | None:intergenic | 25.0% |
| ! | CATAAACTGCACAAAAAATA+AGG | - | chr6.3:82710055-82710074 | None:intergenic | 25.0% |
| ! | CGAAAAAAACTATAAAAGGT+GGG | + | chr6.3:82710220-82710239 | MS.gene66410:intron | 25.0% |
| ! | CTATATTTATGGACAATATG+AGG | - | chr6.3:82710763-82710782 | None:intergenic | 25.0% |
| ! | CTCATATTGTCCATAAATAT+AGG | + | chr6.3:82710761-82710780 | MS.gene66410:intron | 25.0% |
| ! | GAATAAACTCACAAATGAAA+TGG | - | chr6.3:82711367-82711386 | None:intergenic | 25.0% |
| ! | GAATGTAAAAATCATGTTTG+TGG | + | chr6.3:82715188-82715207 | MS.gene66410:intron | 25.0% |
| ! | GTAAAATTGTGAAATGTCTT+TGG | + | chr6.3:82712658-82712677 | MS.gene66410:intron | 25.0% |
| ! | GTGATTAGTATTAGTAAAAG+TGG | + | chr6.3:82710645-82710664 | MS.gene66410:intron | 25.0% |
| ! | TCAAAACATATATGCAACTA+AGG | - | chr6.3:82711398-82711417 | None:intergenic | 25.0% |
| ! | TCATACCTTTATATCCAAAT+CGG | - | chr6.3:82710106-82710125 | None:intergenic | 25.0% |
| ! | TCTATCATTCATAGAATCAT+AGG | - | chr6.3:82711040-82711059 | None:intergenic | 25.0% |
| ! | TGAAAACAATGTAAAGTGAT+GGG | + | chr6.3:82713078-82713097 | MS.gene66410:intron | 25.0% |
| ! | TGAACTATGAAAAATAGAGT+GGG | - | chr6.3:82713359-82713378 | None:intergenic | 25.0% |
| ! | TTCAACATATTTGTAACACT+GGG | - | chr6.3:82711139-82711158 | None:intergenic | 25.0% |
| ! | TTCAATGAAAATGCTTAAAG+GGG | + | chr6.3:82714734-82714753 | MS.gene66410:intron | 25.0% |
| ! | TTGAAAACAATGTAAAGTGA+TGG | + | chr6.3:82713077-82713096 | MS.gene66410:intron | 25.0% |
| ! | TTGGAATTATGTAAACTTGA+GGG | + | chr6.3:82712677-82712696 | MS.gene66410:intron | 25.0% |
| ! | TTGGTATGCCTTAATAATAT+TGG | - | chr6.3:82710170-82710189 | None:intergenic | 25.0% |
| ! | TTTAGTGGAAATAAGGTAAA+GGG | + | chr6.3:82712954-82712973 | MS.gene66410:intron | 25.0% |
| ! | TTTCAACATATTTGTAACAC+TGG | - | chr6.3:82711140-82711159 | None:intergenic | 25.0% |
| !! | ATATTTTCTCTCAAAACTTG+GGG | + | chr6.3:82710564-82710583 | MS.gene66410:intron | 25.0% |
| !! | ATGATATGTTTAAAACCCAA+CGG | + | chr6.3:82709513-82709532 | MS.gene66410:CDS | 25.0% |
| !! | CAATATTTTCTCTCAAAACT+TGG | + | chr6.3:82710562-82710581 | MS.gene66410:intron | 25.0% |
| !! | CTGAACTTTAGAAATTGTAA+CGG | + | chr6.3:82712541-82712560 | MS.gene66410:intron | 25.0% |
| !! | CTTCAAAGAACTTTTTGTTA+GGG | - | chr6.3:82710417-82710436 | None:intergenic | 25.0% |
| !! | TCCTTGATAATTTCAGATTT+GGG | - | chr6.3:82709479-82709498 | None:intergenic | 25.0% |
| !! | TTTCTTTTATTCTTTTGGCA+GGG | + | chr6.3:82712609-82712628 | MS.gene66410:intron | 25.0% |
| !! | TTTGGAATTATGTAAACTTG+AGG | + | chr6.3:82712676-82712695 | MS.gene66410:intron | 25.0% |
| !! | TTTTCTTTTATTCTTTTGGC+AGG | + | chr6.3:82712608-82712627 | MS.gene66410:intron | 25.0% |
| !!! | ACCTTTTATAGTTTTTTTCG+CGG | - | chr6.3:82710220-82710239 | None:intergenic | 25.0% |
| !!! | ACGATTCTTATCCATTTTTT+TGG | - | chr6.3:82712819-82712838 | None:intergenic | 25.0% |
| !!! | ACTTGAAATGTTTTTTGTTC+AGG | + | chr6.3:82711463-82711482 | MS.gene66410:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr6.3:82715046-82715065 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTAAATTGGAAGG+GGG | - | chr6.3:82713874-82713893 | None:intergenic | 25.0% |
| !!! | ATAATTTTTCGGAGTCAAAA+AGG | - | chr6.3:82714242-82714261 | None:intergenic | 25.0% |
| !!! | CACTTTTTTAATTGTTACGA+TGG | + | chr6.3:82715504-82715523 | MS.gene66410:intron | 25.0% |
| !!! | CATAAGTTTTAAATTGGAAG+GGG | - | chr6.3:82713875-82713894 | None:intergenic | 25.0% |
| !!! | GTTTTAAAGTTGTGAAACTT+AGG | - | chr6.3:82713503-82713522 | None:intergenic | 25.0% |
| !!! | TAATTTTTCGGAGTCAAAAA+GGG | - | chr6.3:82714241-82714260 | None:intergenic | 25.0% |
| !!! | TTAGTGTATGTTTGGTTTTA+TGG | + | chr6.3:82714835-82714854 | MS.gene66410:intron | 25.0% |
| !!! | TTTGGGGTTTTTTGTATTTT+GGG | - | chr6.3:82710268-82710287 | None:intergenic | 25.0% |
| !!! | TTTTGGGGTTTTTTGTATTT+TGG | - | chr6.3:82710269-82710288 | None:intergenic | 25.0% |
| AAAACATATATATTGGGCCA+TGG | - | chr6.3:82710897-82710916 | None:intergenic | 30.0% | |
| AAAACCCTTTCAATTTAGGA+TGG | - | chr6.3:82710080-82710099 | None:intergenic | 30.0% | |
| AAAATATGCAAGCAAGGTTT+GGG | - | chr6.3:82714120-82714139 | None:intergenic | 30.0% | |
| AAACAGATAAAACTAACGGA+AGG | - | chr6.3:82713661-82713680 | None:intergenic | 30.0% | |
| AAACATGAAGAAGGAGAAAA+AGG | + | chr6.3:82711336-82711355 | MS.gene66410:CDS | 30.0% | |
| AACAGATAAAACTAACGGAA+GGG | - | chr6.3:82713660-82713679 | None:intergenic | 30.0% | |
| AACATGAGACAATCAATGAA+TGG | - | chr6.3:82713550-82713569 | None:intergenic | 30.0% | |
| AACTAAAGCTAAAACCAAGT+CGG | - | chr6.3:82712722-82712741 | None:intergenic | 30.0% | |
| AATATCAACATGCGTCAAAA+TGG | - | chr6.3:82715430-82715449 | None:intergenic | 30.0% | |
| AATCAAATAAAGGCTAGTGT+AGG | + | chr6.3:82712245-82712264 | MS.gene66410:intron | 30.0% | |
| AATGTTGGAAAACATGAAGA+AGG | + | chr6.3:82711327-82711346 | MS.gene66410:CDS | 30.0% | |
| ACAAATCTAAACAATCTGCA+AGG | - | chr6.3:82711105-82711124 | None:intergenic | 30.0% | |
| ACAGAGAAAACTAACAAACA+AGG | + | chr6.3:82713954-82713973 | MS.gene66410:intron | 30.0% | |
| ACATAAGATTCTATTAGAGG+TGG | - | chr6.3:82711666-82711685 | None:intergenic | 30.0% | |
| ACATTGTAATAATAACGACC+AGG | - | chr6.3:82712095-82712114 | None:intergenic | 30.0% | |
| ACCGCGAAAAAAACTATAAA+AGG | + | chr6.3:82710216-82710235 | MS.gene66410:intron | 30.0% | |
| ACTTCTGATCTTATGTTTGT+AGG | + | chr6.3:82709823-82709842 | MS.gene66410:intron | 30.0% | |
| AGCATGTTCAGAAATCAATA+TGG | + | chr6.3:82710966-82710985 | MS.gene66410:intron | 30.0% | |
| AGGAACAACATTGAATGAAA+TGG | - | chr6.3:82711184-82711203 | None:intergenic | 30.0% | |
| AGTTGAAAAGGAAGTTGAAA+AGG | + | chr6.3:82711718-82711737 | MS.gene66410:CDS | 30.0% | |
| ATGAACCATCCTAAATTGAA+AGG | + | chr6.3:82710072-82710091 | MS.gene66410:CDS | 30.0% | |
| ATGCATAAAATATGCAAGCA+AGG | - | chr6.3:82714126-82714145 | None:intergenic | 30.0% | |
| ATGGAAAAGAACATTGGTAT+TGG | + | chr6.3:82715601-82715620 | MS.gene66410:CDS | 30.0% | |
| ATTGTAACTAACTTGAAGCT+AGG | - | chr6.3:82715229-82715248 | None:intergenic | 30.0% | |
| ATTTCAATTTCATCCATCCA+TGG | + | chr6.3:82710877-82710896 | MS.gene66410:intron | 30.0% | |
| ATTTGGATGGAAAAGAACAT+TGG | + | chr6.3:82715595-82715614 | MS.gene66410:CDS | 30.0% | |
| CAAGTTAGTTACAATTCTAG+AGG | + | chr6.3:82715234-82715253 | MS.gene66410:intron | 30.0% | |
| CCACTGATATTATCAATTTG+TGG | + | chr6.3:82715773-82715792 | MS.gene66410:CDS | 30.0% | |
| CCTAACAAAAAGTTCTTTGA+AGG | + | chr6.3:82710415-82710434 | MS.gene66410:intron | 30.0% | |
| CGTTAGCCAATTTAATTAAC+TGG | + | chr6.3:82709670-82709689 | MS.gene66410:intron | 30.0% | |
| CTTATGTATGAAATTTGAGG+GGG | + | chr6.3:82713889-82713908 | MS.gene66410:intron | 30.0% | |
| GAAATAGAAAAAAGGAAGAG+TGG | - | chr6.3:82710862-82710881 | None:intergenic | 30.0% | |
| GAACAATAAAGATGTTATGG+TGG | + | chr6.3:82712393-82712412 | MS.gene66410:intron | 30.0% | |
| GCGAAAAAAACTATAAAAGG+TGG | + | chr6.3:82710219-82710238 | MS.gene66410:intron | 30.0% | |
| GCTTTATCTAAAAATACTCG+AGG | + | chr6.3:82709696-82709715 | MS.gene66410:intron | 30.0% | |
| GTCAAAAACCCTTTCAATTT+AGG | - | chr6.3:82710084-82710103 | None:intergenic | 30.0% | |
| GTTCAGAAATCAATATGGAT+TGG | + | chr6.3:82710971-82710990 | MS.gene66410:intron | 30.0% | |
| TAAAAAAAATGGTGCAGTGT+GGG | - | chr6.3:82713032-82713051 | None:intergenic | 30.0% | |
| TAAAATATGCAAGCAAGGTT+TGG | - | chr6.3:82714121-82714140 | None:intergenic | 30.0% | |
| TAATACTAATCACAACAGCT+GGG | - | chr6.3:82710638-82710657 | None:intergenic | 30.0% | |
| TCTCCAAATAAGAGAAGTTA+TGG | + | chr6.3:82710734-82710753 | MS.gene66410:intron | 30.0% | |
| TGAACCATCCTAAATTGAAA+GGG | + | chr6.3:82710073-82710092 | MS.gene66410:CDS | 30.0% | |
| TGAACGTTACAATTTCAAAG+TGG | + | chr6.3:82714045-82714064 | MS.gene66410:intron | 30.0% | |
| TGAACTCATTGAAGTTGAAA+AGG | + | chr6.3:82711706-82711725 | MS.gene66410:CDS | 30.0% | |
| TGTAGGATATTGAAGTGAAA+AGG | + | chr6.3:82709840-82709859 | MS.gene66410:intron | 30.0% | |
| TTAAAAAAAATGGTGCAGTG+TGG | - | chr6.3:82713033-82713052 | None:intergenic | 30.0% | |
| TTAAAGTTGTGAAACTTAGG+CGG | - | chr6.3:82713500-82713519 | None:intergenic | 30.0% | |
| TTATGTATGAAATTTGAGGG+GGG | + | chr6.3:82713890-82713909 | MS.gene66410:intron | 30.0% | |
| TTCAGTGCGAATGTTTAAAA+GGG | + | chr6.3:82714801-82714820 | MS.gene66410:intron | 30.0% | |
| TTTCAGTGCGAATGTTTAAA+AGG | + | chr6.3:82714800-82714819 | MS.gene66410:intron | 30.0% | |
| ! | AAGTGCTGTCAATCAAATAA+AGG | + | chr6.3:82712235-82712254 | MS.gene66410:intron | 30.0% |
| ! | ACAACAGTTTTCCAGAAAAA+AGG | - | chr6.3:82709950-82709969 | None:intergenic | 30.0% |
| ! | ACCCAAATCTGAAATTATCA+AGG | + | chr6.3:82709475-82709494 | MS.gene66410:CDS | 30.0% |
| ! | AGACGTTTGACAATTTTAGA+AGG | + | chr6.3:82713985-82714004 | MS.gene66410:intron | 30.0% |
| ! | AGTGAAAAGGCTTTTCATTT+TGG | + | chr6.3:82709853-82709872 | MS.gene66410:CDS | 30.0% |
| ! | ATCAGAAGTATATGGAGATA+AGG | + | chr6.3:82709882-82709901 | MS.gene66410:CDS | 30.0% |
| ! | ATCTTTTCATGAAACGATCA+AGG | - | chr6.3:82710533-82710552 | None:intergenic | 30.0% |
| ! | CAAATCTGAAATTATCAAGG+AGG | + | chr6.3:82709478-82709497 | MS.gene66410:CDS | 30.0% |
| ! | CCACAAATTGATAATATCAG+TGG | - | chr6.3:82715776-82715795 | None:intergenic | 30.0% |
| ! | CCTTCAAAGAACTTTTTGTT+AGG | - | chr6.3:82710418-82710437 | None:intergenic | 30.0% |
| ! | CTCCTTGATAATTTCAGATT+TGG | - | chr6.3:82709480-82709499 | None:intergenic | 30.0% |
| ! | GATAATTTCAGATTTGGGTT+TGG | - | chr6.3:82709474-82709493 | None:intergenic | 30.0% |
| ! | TCTTTTCATGAAACGATCAA+GGG | - | chr6.3:82710532-82710551 | None:intergenic | 30.0% |
| !! | AATGAGTTGATTCATAAGAG+TGG | + | chr6.3:82711897-82711916 | MS.gene66410:CDS | 30.0% |
| !! | AATTCTCTTCTATTTTGGGA+AGG | + | chr6.3:82713390-82713409 | MS.gene66410:intron | 30.0% |
| !! | ATGAGTTGATTCATAAGAGT+GGG | + | chr6.3:82711898-82711917 | MS.gene66410:CDS | 30.0% |
| !! | ATTTGCTTTTGTGATATCCA+AGG | - | chr6.3:82715733-82715752 | None:intergenic | 30.0% |
| !! | GACGTTTGACAATTTTAGAA+GGG | + | chr6.3:82713986-82714005 | MS.gene66410:intron | 30.0% |
| !! | TTTGACCGATTTGGATATAA+AGG | + | chr6.3:82710098-82710117 | MS.gene66410:CDS | 30.0% |
| !!! | ATCTTTTTTTTGTCAAGGGA+TGG | - | chr6.3:82714210-82714229 | None:intergenic | 30.0% |
| !!! | ATGTACGTTGTTTGTTTTGA+TGG | - | chr6.3:82714532-82714551 | None:intergenic | 30.0% |
| !!! | TGTACGTTGTTTGTTTTGAT+GGG | - | chr6.3:82714531-82714550 | None:intergenic | 30.0% |
| !!! | TTGGGGTTTTTTGTATTTTG+GGG | - | chr6.3:82710267-82710286 | None:intergenic | 30.0% |
| AAATATCTGCTTTCAGCTGT+AGG | + | chr6.3:82710599-82710618 | MS.gene66410:intron | 35.0% | |
| AAATATGCAAGCAAGGTTTG+GGG | - | chr6.3:82714119-82714138 | None:intergenic | 35.0% | |
| AGTAGAATCAATTCTACCAG+AGG | + | chr6.3:82715018-82715037 | MS.gene66410:intron | 35.0% | |
| ATGAACTTCAACACAAGTCT+TGG | - | chr6.3:82715577-82715596 | None:intergenic | 35.0% | |
| ATTGAAAAGGTTGTTGCAAG+AGG | - | chr6.3:82714504-82714523 | None:intergenic | 35.0% | |
| CAAAAGTAATAAGGGCTTAG+AGG | - | chr6.3:82715661-82715680 | None:intergenic | 35.0% | |
| CATAACAAACTACTAAGCTC+TGG | - | chr6.3:82712343-82712362 | None:intergenic | 35.0% | |
| CATCAAGGTTTCAAAACACA+CGG | - | chr6.3:82710032-82710051 | None:intergenic | 35.0% | |
| CATCAGATATATATGACTGG+AGG | - | chr6.3:82711204-82711223 | None:intergenic | 35.0% | |
| CCAGACACAACATTAAAAAC+AGG | - | chr6.3:82712880-82712899 | None:intergenic | 35.0% | |
| CTAATACTAATCACAACAGC+TGG | - | chr6.3:82710639-82710658 | None:intergenic | 35.0% | |
| CTATAGTCATGATATAGCAC+AGG | + | chr6.3:82712170-82712189 | MS.gene66410:intron | 35.0% | |
| CTGGCAGAAATTAGGTAAAA+AGG | + | chr6.3:82712896-82712915 | MS.gene66410:intron | 35.0% | |
| GACTTGTGTTGAAGTTCATT+TGG | + | chr6.3:82715578-82715597 | MS.gene66410:CDS | 35.0% | |
| GATCTTGATTGCATGAAACT+AGG | + | chr6.3:82711058-82711077 | MS.gene66410:intron | 35.0% | |
| TACAAAAATTACTCGAGTGC+AGG | + | chr6.3:82714313-82714332 | MS.gene66410:intron | 35.0% | |
| TACTACACTACAAAACCAGT+AGG | + | chr6.3:82710351-82710370 | MS.gene66410:intron | 35.0% | |
| TCAGAACATCTAACAAAACC+AGG | - | chr6.3:82710483-82710502 | None:intergenic | 35.0% | |
| TCAGTGCGAATGTTTAAAAG+GGG | + | chr6.3:82714802-82714821 | MS.gene66410:intron | 35.0% | |
| TCCTTGGCCAAAAGTAATAA+GGG | - | chr6.3:82715669-82715688 | None:intergenic | 35.0% | |
| TCTAAAAATACTCGAGGACT+TGG | + | chr6.3:82709702-82709721 | MS.gene66410:intron | 35.0% | |
| TGAAATTATCAAGGAGGAAG+AGG | + | chr6.3:82709484-82709503 | MS.gene66410:CDS | 35.0% | |
| TGTAGTAAGGAATTGATGCT+GGG | - | chr6.3:82710338-82710357 | None:intergenic | 35.0% | |
| TGTGTTGAAGTTCATTTGGA+TGG | + | chr6.3:82715582-82715601 | MS.gene66410:CDS | 35.0% | |
| TTCCTTGGCCAAAAGTAATA+AGG | - | chr6.3:82715670-82715689 | None:intergenic | 35.0% | |
| TTGGCTCAAATGAATGTATG+AGG | + | chr6.3:82710990-82711009 | MS.gene66410:intron | 35.0% | |
| ! | ATACCTTTTTGATGTACCGT+TGG | - | chr6.3:82709532-82709551 | None:intergenic | 35.0% |
| ! | CTCTAAGCCCTTATTACTTT+TGG | + | chr6.3:82715659-82715678 | MS.gene66410:CDS | 35.0% |
| ! | GAATTCCAGAACAAGAGTAT+TGG | - | chr6.3:82713219-82713238 | None:intergenic | 35.0% |
| ! | GCACAAAAAATAAGGCATCA+AGG | - | chr6.3:82710047-82710066 | None:intergenic | 35.0% |
| ! | GGACTTAGATCAGAAGTATA+TGG | + | chr6.3:82709874-82709893 | MS.gene66410:CDS | 35.0% |
| ! | GTGTTATCGTGTTCTAGATA+AGG | - | chr6.3:82714351-82714370 | None:intergenic | 35.0% |
| ! | TACACCTGCAGAATCAATTT+TGG | + | chr6.3:82715065-82715084 | MS.gene66410:intron | 35.0% |
| ! | TACCTTTTTGATGTACCGTT+GGG | - | chr6.3:82709531-82709550 | None:intergenic | 35.0% |
| ! | TTAGGCAGGCATATTACTTT+TGG | - | chr6.3:82710286-82710305 | None:intergenic | 35.0% |
| ! | TTTGATGGGTCGAATTGAAA+AGG | - | chr6.3:82714517-82714536 | None:intergenic | 35.0% |
| !! | TAGGCAGGCATATTACTTTT+GGG | - | chr6.3:82710285-82710304 | None:intergenic | 35.0% |
| !! | TGAGTTGATTCATAAGAGTG+GGG | + | chr6.3:82711899-82711918 | MS.gene66410:CDS | 35.0% |
| !! | TTGTTGTAGCTTTAGCTTGT+TGG | + | chr6.3:82712741-82712760 | MS.gene66410:intron | 35.0% |
| !!! | ACTGGTTTTGTAGTGTAGTA+AGG | - | chr6.3:82710351-82710370 | None:intergenic | 35.0% |
| !!! | CCTGTTTTTAATGTTGTGTC+TGG | + | chr6.3:82712877-82712896 | MS.gene66410:intron | 35.0% |
| !!! | CTGCTTTTGTTTTGTGATAC+TGG | + | chr6.3:82712199-82712218 | MS.gene66410:intron | 35.0% |
| !!! | TAGTTTTTTTCGCGGTGTTT+TGG | - | chr6.3:82710212-82710231 | None:intergenic | 35.0% |
| !!! | TATTTTTTTTGGCGGTGTTC+AGG | + | chr6.3:82714087-82714106 | MS.gene66410:intron | 35.0% |
| !!! | TGGGGTTTTTTGTATTTTGG+GGG | - | chr6.3:82710266-82710285 | None:intergenic | 35.0% |
| !!! | TTGGTTTTGTGGTGATCTTT+TGG | - | chr6.3:82710384-82710403 | None:intergenic | 35.0% |
| AAAAGTGATGACACGTCACA+AGG | + | chr6.3:82713732-82713751 | MS.gene66410:intron | 40.0% | |
| AAAGTGATGACACGTCACAA+GGG | + | chr6.3:82713733-82713752 | MS.gene66410:intron | 40.0% | |
| AACCCAACGGTACATCAAAA+AGG | + | chr6.3:82709526-82709545 | MS.gene66410:CDS | 40.0% | |
| AAGAGCCACATTAGCATGTT+AGG | - | chr6.3:82713681-82713700 | None:intergenic | 40.0% | |
| ACGAAACAATCAGAACACGA+AGG | - | chr6.3:82713001-82713020 | None:intergenic | 40.0% | |
| AGAGAAAGAACCTGAGATTG+AGG | - | chr6.3:82714657-82714676 | None:intergenic | 40.0% | |
| ATACCAACACAAGATTCGCA+TGG | + | chr6.3:82710183-82710202 | MS.gene66410:intron | 40.0% | |
| ATGAATGCAGCTTCTTTGAC+TGG | + | chr6.3:82711862-82711881 | MS.gene66410:intron | 40.0% | |
| CAACAGCAGAAACAGTAAAG+CGG | - | chr6.3:82714581-82714600 | None:intergenic | 40.0% | |
| CATATATATTGGGCCATGGA+TGG | - | chr6.3:82710893-82710912 | None:intergenic | 40.0% | |
| CTCTGTTTAATATGCTGACG+TGG | - | chr6.3:82713940-82713959 | None:intergenic | 40.0% | |
| CTGGAAAACTGTTGTGAGTT+TGG | + | chr6.3:82709955-82709974 | MS.gene66410:intron | 40.0% | |
| GAAATTGTAGCTTCTCGTTC+TGG | - | chr6.3:82714990-82715009 | None:intergenic | 40.0% | |
| GGACTTGATCAAATGATACC+TGG | + | chr6.3:82715622-82715641 | MS.gene66410:CDS | 40.0% | |
| GTAATAAGGGCTTAGAGGAA+TGG | - | chr6.3:82715656-82715675 | None:intergenic | 40.0% | |
| GTGAAAATTTCCTTAGTGGC+AGG | + | chr6.3:82712434-82712453 | MS.gene66410:intron | 40.0% | |
| GTGTAGTAAGGAATTGATGC+TGG | - | chr6.3:82710339-82710358 | None:intergenic | 40.0% | |
| TAACCATGCGAATCTTGTGT+TGG | - | chr6.3:82710189-82710208 | None:intergenic | 40.0% | |
| TAGCTTCTGCATCCAAATAC+AGG | - | chr6.3:82715394-82715413 | None:intergenic | 40.0% | |
| TATGAAGTATGGGATGATCC+TGG | + | chr6.3:82712074-82712093 | MS.gene66410:CDS | 40.0% | |
| TCACTACGCTCATCACAAAT+AGG | - | chr6.3:82709911-82709930 | None:intergenic | 40.0% | |
| TCAGTGTCTCAAAGAAACTG+CGG | + | chr6.3:82711561-82711580 | MS.gene66410:CDS | 40.0% | |
| TGTTGTGTCTGGCAGAAATT+AGG | + | chr6.3:82712888-82712907 | MS.gene66410:intron | 40.0% | |
| ! | ATCATTTTCGACTCTCCCTA+CGG | + | chr6.3:82715341-82715360 | MS.gene66410:intron | 40.0% |
| ! | GAAAGGGTTTTTGACCGATT+TGG | + | chr6.3:82710089-82710108 | MS.gene66410:CDS | 40.0% |
| ! | GTTAGATGTTCTGAGTCTTG+TGG | + | chr6.3:82710489-82710508 | MS.gene66410:intron | 40.0% |
| ! | TACTCGATCTCCATCCTTTT+GGG | - | chr6.3:82713467-82713486 | None:intergenic | 40.0% |
| ! | TCTAGAACACGATAACACTC+TGG | + | chr6.3:82714353-82714372 | MS.gene66410:intron | 40.0% |
| ! | TTTGACATGTTTGGTTCCTC+TGG | - | chr6.3:82715037-82715056 | None:intergenic | 40.0% |
| !! | AACAAGAGTATTGGAGGGTA+AGG | - | chr6.3:82713210-82713229 | None:intergenic | 40.0% |
| !! | ACAAGTCTTGGTTTGTCAGT+TGG | - | chr6.3:82715565-82715584 | None:intergenic | 40.0% |
| !! | AGGCAGGCATATTACTTTTG+GGG | - | chr6.3:82710284-82710303 | None:intergenic | 40.0% |
| !! | ATTCTTTTGGCAGGGTGTTT+GGG | + | chr6.3:82712617-82712636 | MS.gene66410:intron | 40.0% |
| !! | CTCTTCTATTTTGGGAAGGA+CGG | + | chr6.3:82713394-82713413 | MS.gene66410:intron | 40.0% |
| !! | GAGGGTATTTAACGTTTGTG+TGG | + | chr6.3:82712695-82712714 | MS.gene66410:intron | 40.0% |
| !! | TATTCTTTTGGCAGGGTGTT+TGG | + | chr6.3:82712616-82712635 | MS.gene66410:intron | 40.0% |
| !! | TCATCACTTTTCTGACCACA+TGG | - | chr6.3:82713723-82713742 | None:intergenic | 40.0% |
| !! | TCCAGAACAAGAGTATTGGA+GGG | - | chr6.3:82713215-82713234 | None:intergenic | 40.0% |
| !! | TGGGTAGTTGTGTCATTTGA+AGG | + | chr6.3:82713097-82713116 | MS.gene66410:intron | 40.0% |
| !! | TTCCAGAACAAGAGTATTGG+AGG | - | chr6.3:82713216-82713235 | None:intergenic | 40.0% |
| !!! | AATTTTGGCTCCTCCAAAAG+CGG | + | chr6.3:82715080-82715099 | MS.gene66410:intron | 40.0% |
| !!! | AGGTTTTTGTTGACTCAGAG+AGG | - | chr6.3:82713617-82713636 | None:intergenic | 40.0% |
| !!! | GTGTGTTTGGTTTTACCGTA+GGG | - | chr6.3:82715359-82715378 | None:intergenic | 40.0% |
| !!! | TGTAATTCTGGTTCCGCTTT+TGG | - | chr6.3:82715096-82715115 | None:intergenic | 40.0% |
| !!! | TGTGGTGATCTTTTGGTTTC+AGG | - | chr6.3:82710377-82710396 | None:intergenic | 40.0% |
| !!! | TGTGTGTTTGGTTTTACCGT+AGG | - | chr6.3:82715360-82715379 | None:intergenic | 40.0% |
| !!! | TTAAGCCCAGCTCGTTTTTT+AGG | - | chr6.3:82710304-82710323 | None:intergenic | 40.0% |
| AACGCAAAAAGGAACGCAAG+AGG | + | chr6.3:82711765-82711784 | MS.gene66410:CDS | 45.0% | |
| AAGTGATGACACGTCACAAG+GGG | + | chr6.3:82713734-82713753 | MS.gene66410:intron | 45.0% | |
| ACACACACGAAGCCTGTATT+TGG | + | chr6.3:82715379-82715398 | MS.gene66410:intron | 45.0% | |
| ACCCTCCAATACTCTTGTTC+TGG | + | chr6.3:82713211-82713230 | MS.gene66410:intron | 45.0% | |
| ACGCAAAAAGCAGCGTGAAA+AGG | + | chr6.3:82711742-82711761 | MS.gene66410:CDS | 45.0% | |
| ACTCCCTTCTTAATTGCCCT+TGG | - | chr6.3:82709424-82709443 | None:intergenic | 45.0% | |
| AGACACACGAAGCCTATGTT+TGG | + | chr6.3:82715273-82715292 | MS.gene66410:intron | 45.0% | |
| AGATTGAGGTGGAGGTTGAA+GGG | - | chr6.3:82714643-82714662 | None:intergenic | 45.0% | |
| AGGGCAATTAAGAAGGGAGT+CGG | + | chr6.3:82709424-82709443 | MS.gene66410:CDS | 45.0% | |
| AGTGTAGACATGCTCCCAAA+AGG | + | chr6.3:82713450-82713469 | MS.gene66410:intron | 45.0% | |
| AGTTGCTAGAGAGTAAGCCT+TGG | + | chr6.3:82715713-82715732 | MS.gene66410:CDS | 45.0% | |
| ATCAATTTGTGGCAGCAGAG+CGG | + | chr6.3:82715784-82715803 | MS.gene66410:CDS | 45.0% | |
| CATAGGCTTCGTGTGTCTAT+TGG | - | chr6.3:82715271-82715290 | None:intergenic | 45.0% | |
| CTCCCTTCTTAATTGCCCTT+GGG | - | chr6.3:82709423-82709442 | None:intergenic | 45.0% | |
| GAAAGAACCTGAGATTGAGG+TGG | - | chr6.3:82714654-82714673 | None:intergenic | 45.0% | |
| GACCCAAGGGCAATTAAGAA+GGG | + | chr6.3:82709418-82709437 | MS.gene66410:CDS | 45.0% | |
| GAGCTTCTGCATCCAAACAT+AGG | - | chr6.3:82715288-82715307 | None:intergenic | 45.0% | |
| GATCAAATGATACCTGGCCA+TGG | + | chr6.3:82715628-82715647 | MS.gene66410:CDS | 45.0% | |
| GCGTGAAAAGGAACGCAAAA+AGG | + | chr6.3:82711754-82711773 | MS.gene66410:CDS | 45.0% | |
| TAAGAGTGGGGATAGAGATG+AGG | + | chr6.3:82711911-82711930 | MS.gene66410:CDS | 45.0% | |
| TAAGGAAGAAGCAGGGTTAG+TGG | - | chr6.3:82713192-82713211 | None:intergenic | 45.0% | |
| TAGACATGCTCCCAAAAGGA+TGG | + | chr6.3:82713454-82713473 | MS.gene66410:intron | 45.0% | |
| TCAAGACCAAGAAGCCAAAG+AGG | + | chr6.3:82709392-82709411 | MS.gene66410:CDS | 45.0% | |
| TCTTCCCAAGCATCTTTCCT+TGG | - | chr6.3:82715685-82715704 | None:intergenic | 45.0% | |
| TGCCCTCAAGACAAATCATC+AGG | - | chr6.3:82710456-82710475 | None:intergenic | 45.0% | |
| TGCGTCAAAATGGAAGCTTG+TGG | - | chr6.3:82715420-82715439 | None:intergenic | 45.0% | |
| TTGGCCAAGGAAAGATGCTT+GGG | + | chr6.3:82715678-82715697 | MS.gene66410:CDS | 45.0% | |
| TTGTTAGGGTGCAGAGCAAT+TGG | - | chr6.3:82710403-82710422 | None:intergenic | 45.0% | |
| TTTGGCCAAGGAAAGATGCT+TGG | + | chr6.3:82715677-82715696 | MS.gene66410:CDS | 45.0% | |
| ! | GGAGCCAAAATTGATTCTGC+AGG | - | chr6.3:82715072-82715091 | None:intergenic | 45.0% |
| ! | GGCCTGATGATTTGTCTTGA+GGG | + | chr6.3:82710451-82710470 | MS.gene66410:intron | 45.0% |
| ! | GTACTCGATCTCCATCCTTT+TGG | - | chr6.3:82713468-82713487 | None:intergenic | 45.0% |
| ! | GTGTTTGGGTGTGTCTGTTT+TGG | + | chr6.3:82712631-82712650 | MS.gene66410:intron | 45.0% |
| ! | TGAGCTTAGCACAGTTGGTA+TGG | - | chr6.3:82714152-82714171 | None:intergenic | 45.0% |
| ! | TGGCCTGATGATTTGTCTTG+AGG | + | chr6.3:82710450-82710469 | MS.gene66410:intron | 45.0% |
| !! | ACGGTTTTGTCTGCGAAGTT+TGG | + | chr6.3:82713413-82713432 | MS.gene66410:intron | 45.0% |
| !! | CTTTGGCTTCTTGGTCTTGA+AGG | - | chr6.3:82709392-82709411 | None:intergenic | 45.0% |
| !! | GCCCTTATTACTTTTGGCCA+AGG | + | chr6.3:82715665-82715684 | MS.gene66410:CDS | 45.0% |
| !! | GTTCTTTGAAGGTGTCGTCT+TGG | + | chr6.3:82710426-82710445 | MS.gene66410:intron | 45.0% |
| !! | TGTTGCAAGAGGCTTTGAAG+TGG | - | chr6.3:82714493-82714512 | None:intergenic | 45.0% |
| !! | TTGTCTTGAGGGCATTTACC+TGG | + | chr6.3:82710462-82710481 | MS.gene66410:intron | 45.0% |
| !! | TTTGAAGGTGTCGTCTTGGT+TGG | + | chr6.3:82710430-82710449 | MS.gene66410:intron | 45.0% |
| !!! | AATTCTGGTTCCGCTTTTGG+AGG | - | chr6.3:82715093-82715112 | None:intergenic | 45.0% |
| !!! | GTGCAGAGCAATTGGTTTTG+TGG | - | chr6.3:82710395-82710414 | None:intergenic | 45.0% |
| !!! | TCTTTTGGTTTCAGGCCTAC+TGG | - | chr6.3:82710369-82710388 | None:intergenic | 45.0% |
| !! | AAAAAAAAAACATATATATT+GGG | - | chr6.3:82710903-82710922 | None:intergenic | 5.0% |
| !! | ATGAAATAAATAATTAAATA+TGG | + | chr6.3:82711825-82711844 | MS.gene66410:intron | 5.0% |
| AAACGGAGGAGAGAGAGAAG+AGG | - | chr6.3:82713154-82713173 | None:intergenic | 50.0% | |
| AACGTTTGTGTGGTCCGACT+TGG | + | chr6.3:82712705-82712724 | MS.gene66410:intron | 50.0% | |
| ACACGTCACAAGGGGGTTAT+TGG | + | chr6.3:82713742-82713761 | MS.gene66410:intron | 50.0% | |
| ACTCGTGAGCTTAGCACAGT+TGG | - | chr6.3:82714157-82714176 | None:intergenic | 50.0% | |
| AGAACCTGAGATTGAGGTGG+AGG | - | chr6.3:82714651-82714670 | None:intergenic | 50.0% | |
| AGATGCTTGGGAAGAGCTCA+AGG | + | chr6.3:82715690-82715709 | MS.gene66410:CDS | 50.0% | |
| AGTGATGACACGTCACAAGG+GGG | + | chr6.3:82713735-82713754 | MS.gene66410:intron | 50.0% | |
| CTGGATCCAGTGCTCAATGA+GGG | + | chr6.3:82712502-82712521 | MS.gene66410:intron | 50.0% | |
| GAAACTTAGGCGGTGAAGTC+TGG | - | chr6.3:82713490-82713509 | None:intergenic | 50.0% | |
| GACCAAGAAGCCAAAGAGGT+TGG | + | chr6.3:82709396-82709415 | MS.gene66410:CDS | 50.0% | |
| GAGATTGAGGTGGAGGTTGA+AGG | - | chr6.3:82714644-82714663 | None:intergenic | 50.0% | |
| GCAAAAAGGAACGCAAGAGG+AGG | + | chr6.3:82711768-82711787 | MS.gene66410:CDS | 50.0% | |
| GCCTGCCTAAAAAACGAGCT+GGG | + | chr6.3:82710296-82710315 | MS.gene66410:intron | 50.0% | |
| GCTTCGTGTGTGTGTGTGTT+TGG | - | chr6.3:82715372-82715391 | None:intergenic | 50.0% | |
| GGACCCAAGGGCAATTAAGA+AGG | + | chr6.3:82709417-82709436 | MS.gene66410:CDS | 50.0% | |
| GGAGGGTGGCAAAGAACAAA+CGG | - | chr6.3:82713171-82713190 | None:intergenic | 50.0% | |
| GGCTTAGAGGAATGGTTCCA+TGG | - | chr6.3:82715648-82715667 | None:intergenic | 50.0% | |
| GTGGCTCTTAACTGCCAATG+TGG | + | chr6.3:82713692-82713711 | MS.gene66410:intron | 50.0% | |
| GTGTCTCAAAGAAACTGCGG+TGG | + | chr6.3:82711564-82711583 | MS.gene66410:CDS | 50.0% | |
| GTTGCTGTGCTGTAGAAGCT+AGG | + | chr6.3:82715526-82715545 | MS.gene66410:intron | 50.0% | |
| TCAACCTCCACCTCAATCTC+AGG | + | chr6.3:82714644-82714663 | MS.gene66410:intron | 50.0% | |
| TCATCGTCATCCTGCCACTA+AGG | - | chr6.3:82712447-82712466 | None:intergenic | 50.0% | |
| TGATCAGGCTGACGATGATC+AGG | + | chr6.3:82712464-82712483 | MS.gene66410:intron | 50.0% | |
| TGCATACCCTCATTGAGCAC+TGG | - | chr6.3:82712511-82712530 | None:intergenic | 50.0% | |
| TGCCTGCCTAAAAAACGAGC+TGG | + | chr6.3:82710295-82710314 | MS.gene66410:intron | 50.0% | |
| TGGAGGGTAAGGAAGAAGCA+GGG | - | chr6.3:82713199-82713218 | None:intergenic | 50.0% | |
| TGTGCTGTAGAAGCTAGGAG+TGG | + | chr6.3:82715531-82715550 | MS.gene66410:intron | 50.0% | |
| TTGGAGGGTAAGGAAGAAGC+AGG | - | chr6.3:82713200-82713219 | None:intergenic | 50.0% | |
| ! | AAAAGGTGGGCGCCGTATAT+AGG | + | chr6.3:82710233-82710252 | MS.gene66410:intron | 50.0% |
| ! | GAAGAAGCAGGGTTAGTGGA+GGG | - | chr6.3:82713188-82713207 | None:intergenic | 50.0% |
| ! | GTCCAACCTCTTTGGCTTCT+TGG | - | chr6.3:82709401-82709420 | None:intergenic | 50.0% |
| !! | GCAAGAGGCTTTGAAGTGGT+GGG | - | chr6.3:82714489-82714508 | None:intergenic | 50.0% |
| !! | TGCAAGAGGCTTTGAAGTGG+TGG | - | chr6.3:82714490-82714509 | None:intergenic | 50.0% |
| AATTTGTGGCAGCAGAGCGG+CGG | + | chr6.3:82715787-82715806 | MS.gene66410:CDS | 55.0% | |
| ACCACATGGCAGTGCCACAT+TGG | - | chr6.3:82713709-82713728 | None:intergenic | 55.0% | |
| AGAGGAATGGTTCCATGGCC+AGG | - | chr6.3:82715643-82715662 | None:intergenic | 55.0% | |
| AGCCAAAGAGGTTGGACCCA+AGG | + | chr6.3:82709404-82709423 | MS.gene66410:CDS | 55.0% | |
| GCCAAAGAGGTTGGACCCAA+GGG | + | chr6.3:82709405-82709424 | MS.gene66410:CDS | 55.0% | |
| GCTGGATCCAGTGCTCAATG+AGG | + | chr6.3:82712501-82712520 | MS.gene66410:intron | 55.0% | |
| GGGTGGCAAAGAACAAACGG+AGG | - | chr6.3:82713168-82713187 | None:intergenic | 55.0% | |
| GTGGCAGGATGACGATGATC+AGG | + | chr6.3:82712449-82712468 | MS.gene66410:intron | 55.0% | |
| TGAGGTGGAGGTTGAAGGGA+AGG | - | chr6.3:82714639-82714658 | None:intergenic | 55.0% | |
| TGGAGGTTGAAGGGAAGGAG+AGG | - | chr6.3:82714634-82714653 | None:intergenic | 55.0% | |
| ! | GGAAGAAGCAGGGTTAGTGG+AGG | - | chr6.3:82713189-82713208 | None:intergenic | 55.0% |
| !! | GGGGGTGTTCCGCCTATATA+CGG | - | chr6.3:82710248-82710267 | None:intergenic | 55.0% |
| !!! | GCCCAGCTCGTTTTTTAGGC+AGG | - | chr6.3:82710300-82710319 | None:intergenic | 55.0% |
| CAGGCTGACGATGATCAGGC+TGG | + | chr6.3:82712468-82712487 | MS.gene66410:intron | 60.0% | |
| GCCAATGTGGCACTGCCATG+TGG | + | chr6.3:82713705-82713724 | MS.gene66410:intron | 60.0% | |
| GCCCTTGGGTCCAACCTCTT+TGG | - | chr6.3:82709409-82709428 | None:intergenic | 60.0% | |
| ! | AGGTGGGCGCCGTATATAGG+CGG | + | chr6.3:82710236-82710255 | MS.gene66410:intron | 60.0% |
| ! | GAAGCAGGGTTAGTGGAGGG+TGG | - | chr6.3:82713185-82713204 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 82709383 | 82715825 | 82709383 | ID=MS.gene66410 |
| chr6.3 | mRNA | 82709383 | 82715825 | 82709383 | ID=MS.gene66410.t1;Parent=MS.gene66410 |
| chr6.3 | exon | 82709383 | 82709547 | 82709383 | ID=MS.gene66410.t1.exon1;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82709383 | 82709547 | 82709383 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82709845 | 82709967 | 82709845 | ID=MS.gene66410.t1.exon2;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82709845 | 82709967 | 82709845 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82710069 | 82710119 | 82710069 | ID=MS.gene66410.t1.exon3;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82710069 | 82710119 | 82710069 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82711303 | 82711374 | 82711303 | ID=MS.gene66410.t1.exon4;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82711303 | 82711374 | 82711303 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82711485 | 82711592 | 82711485 | ID=MS.gene66410.t1.exon5;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82711485 | 82711592 | 82711485 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82711692 | 82711789 | 82711692 | ID=MS.gene66410.t1.exon6;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82711692 | 82711789 | 82711692 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82711872 | 82711932 | 82711872 | ID=MS.gene66410.t1.exon7;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82711872 | 82711932 | 82711872 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82712056 | 82712112 | 82712056 | ID=MS.gene66410.t1.exon8;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82712056 | 82712112 | 82712056 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| chr6.3 | exon | 82715541 | 82715825 | 82715541 | ID=MS.gene66410.t1.exon9;Parent=MS.gene66410.t1 |
| chr6.3 | CDS | 82715541 | 82715825 | 82715541 | ID=cds.MS.gene66410.t1;Parent=MS.gene66410.t1 |
| Gene Sequence |
| Protein sequence |
