Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66786.t1 | XP_013455842.1 | 96.3 | 491 | 18 | 0 | 1 | 491 | 1 | 491 | 9.40E-274 | 952.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66786.t1 | Q93ZB9 | 61.3 | 489 | 188 | 1 | 1 | 489 | 5 | 492 | 6.3e-178 | 625.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66786.t1 | A0A072ULF3 | 96.3 | 491 | 18 | 0 | 1 | 491 | 1 | 491 | 6.8e-274 | 952.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049350 | MS.gene66786 | 0.818949 | 1.50E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene66786 | 0.830635 | 2.63E-55 | -1.69E-46 |
| MS.gene049807 | MS.gene66786 | 0.836952 | 6.92E-57 | -1.69E-46 |
| MS.gene051201 | MS.gene66786 | 0.81212 | 4.97E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene66786 | 0.817016 | 4.10E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene66786 | 0.832722 | 8.04E-56 | -1.69E-46 |
| MS.gene054178 | MS.gene66786 | 0.810688 | 1.02E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene66786 | 0.814851 | 1.25E-51 | -1.69E-46 |
| MS.gene054991 | MS.gene66786 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene66786 | 0.822896 | 1.85E-53 | -1.69E-46 |
| MS.gene055537 | MS.gene66786 | 0.814655 | 1.38E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene66786 | 0.803233 | 3.84E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene66786 | 0.817065 | 4.00E-52 | -1.69E-46 |
| MS.gene058492 | MS.gene66786 | 0.831681 | 1.45E-55 | -1.69E-46 |
| MS.gene058649 | MS.gene66786 | 0.816454 | 5.49E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene66786 | 0.810727 | 9.98E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene66786 | 0.821309 | 4.32E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66786.t1 | MTR_4g053785 | 96.334 | 491 | 18 | 0 | 1 | 491 | 1 | 491 | 0.0 | 974 |
| MS.gene66786.t1 | MTR_2g086090 | 72.449 | 490 | 134 | 1 | 2 | 491 | 4 | 492 | 0.0 | 759 |
| MS.gene66786.t1 | MTR_2g086070 | 69.246 | 491 | 151 | 0 | 1 | 491 | 1 | 491 | 0.0 | 723 |
| MS.gene66786.t1 | MTR_4g053880 | 68.571 | 490 | 154 | 0 | 2 | 491 | 3 | 492 | 0.0 | 721 |
| MS.gene66786.t1 | MTR_4g054820 | 47.942 | 486 | 247 | 4 | 9 | 488 | 6 | 491 | 1.16e-169 | 488 |
| MS.gene66786.t1 | MTR_4g053900 | 48.485 | 495 | 251 | 2 | 1 | 491 | 1 | 495 | 3.07e-169 | 486 |
| MS.gene66786.t1 | MTR_5g072540 | 45.657 | 495 | 262 | 4 | 1 | 491 | 1 | 492 | 4.28e-162 | 468 |
| MS.gene66786.t1 | MTR_5g045330 | 45.749 | 494 | 249 | 4 | 1 | 491 | 1 | 478 | 3.15e-155 | 450 |
| MS.gene66786.t1 | MTR_1g054635 | 40.200 | 500 | 274 | 9 | 6 | 491 | 120 | 608 | 1.41e-123 | 374 |
| MS.gene66786.t1 | MTR_6g034620 | 46.537 | 361 | 156 | 7 | 134 | 491 | 1 | 327 | 1.32e-109 | 328 |
| MS.gene66786.t1 | MTR_4g054220 | 50.181 | 277 | 135 | 1 | 9 | 282 | 6 | 282 | 6.96e-98 | 297 |
| MS.gene66786.t1 | MTR_5g072550 | 45.238 | 252 | 132 | 3 | 243 | 491 | 1 | 249 | 1.52e-73 | 233 |
| MS.gene66786.t1 | MTR_4g054240 | 44.076 | 211 | 117 | 1 | 282 | 491 | 20 | 230 | 2.49e-52 | 177 |
| MS.gene66786.t1 | MTR_6g039280 | 41.833 | 251 | 109 | 5 | 243 | 491 | 1 | 216 | 1.60e-49 | 169 |
| MS.gene66786.t1 | MTR_6g034660 | 50.388 | 129 | 64 | 0 | 1 | 129 | 1 | 129 | 2.26e-36 | 131 |
| MS.gene66786.t1 | MTR_3g034830 | 48.276 | 58 | 29 | 1 | 435 | 491 | 4 | 61 | 8.58e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66786.t1 | AT4G33790 | 61.224 | 490 | 189 | 1 | 1 | 490 | 5 | 493 | 0.0 | 639 |
| MS.gene66786.t1 | AT5G22500 | 53.061 | 490 | 226 | 3 | 4 | 491 | 3 | 490 | 0.0 | 545 |
| MS.gene66786.t1 | AT3G44540 | 52.245 | 490 | 232 | 2 | 4 | 491 | 3 | 492 | 0.0 | 541 |
| MS.gene66786.t1 | AT4G33790 | 60.950 | 379 | 147 | 1 | 112 | 490 | 3 | 380 | 1.72e-180 | 511 |
| MS.gene66786.t1 | AT3G44550 | 50.101 | 497 | 240 | 5 | 1 | 491 | 1 | 495 | 1.79e-176 | 505 |
| MS.gene66786.t1 | AT3G44560 | 49.899 | 495 | 237 | 5 | 5 | 491 | 4 | 495 | 1.01e-168 | 485 |
| MS.gene66786.t1 | AT5G22500 | 53.924 | 395 | 179 | 2 | 5 | 398 | 4 | 396 | 2.43e-156 | 450 |
| MS.gene66786.t1 | AT3G44560 | 50.340 | 441 | 215 | 3 | 5 | 442 | 4 | 443 | 2.86e-150 | 437 |
| MS.gene66786.t1 | AT3G44560 | 51.777 | 394 | 186 | 3 | 5 | 395 | 4 | 396 | 2.34e-139 | 407 |
| MS.gene66786.t1 | AT3G44550 | 48.320 | 387 | 194 | 3 | 110 | 491 | 1 | 386 | 3.52e-133 | 390 |
| MS.gene66786.t1 | AT3G44540 | 57.605 | 309 | 130 | 1 | 4 | 311 | 3 | 311 | 5.48e-130 | 380 |
| MS.gene66786.t1 | AT3G44540 | 57.605 | 309 | 130 | 1 | 4 | 311 | 3 | 311 | 5.48e-130 | 380 |
| MS.gene66786.t1 | AT3G11980 | 40.837 | 502 | 269 | 10 | 6 | 491 | 124 | 613 | 1.53e-124 | 377 |
| MS.gene66786.t1 | AT5G22420 | 46.995 | 366 | 189 | 4 | 114 | 478 | 5 | 366 | 7.42e-121 | 358 |
| MS.gene66786.t1 | AT5G22420 | 42.928 | 403 | 224 | 5 | 78 | 478 | 4 | 402 | 1.33e-115 | 347 |
| MS.gene66786.t1 | AT5G22420 | 50.617 | 81 | 29 | 2 | 5 | 75 | 4 | 83 | 3.32e-16 | 80.9 |
| MS.gene66786.t1 | AT5G22420 | 46.307 | 352 | 184 | 4 | 128 | 478 | 3 | 350 | 1.39e-113 | 340 |
| MS.gene66786.t1 | AT5G22420 | 46.307 | 352 | 184 | 4 | 128 | 478 | 3 | 350 | 1.39e-113 | 340 |
| MS.gene66786.t1 | AT3G56700 | 36.179 | 492 | 281 | 9 | 6 | 490 | 77 | 542 | 2.76e-99 | 309 |
| MS.gene66786.t1 | AT5G22420 | 44.304 | 316 | 171 | 4 | 164 | 478 | 4 | 315 | 2.23e-94 | 289 |
| MS.gene66786.t1 | AT5G22420 | 43.667 | 300 | 164 | 4 | 180 | 478 | 1 | 296 | 1.10e-87 | 271 |
| MS.gene66786.t1 | AT5G22420 | 43.667 | 300 | 164 | 4 | 180 | 478 | 1 | 296 | 1.10e-87 | 271 |
| MS.gene66786.t1 | AT3G56700 | 34.350 | 492 | 269 | 10 | 6 | 490 | 77 | 521 | 2.71e-87 | 278 |
Find 112 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCCATTAACACCATTTA+AGG | 0.108077 | 4.3:+46613868 | None:intergenic |
| TCGCTACCTTCTTATGTTAA+AGG | 0.128083 | 4.3:-46610964 | MS.gene66786:intron |
| TATAGTGATCTTCAAGAATT+TGG | 0.161600 | 4.3:-46611098 | MS.gene66786:CDS |
| CACTTGGGCCATTCCTTAAA+TGG | 0.186335 | 4.3:-46613881 | MS.gene66786:CDS |
| TGGTCTTATCTTGGAGAAAA+TGG | 0.255533 | 4.3:+46616909 | None:intergenic |
| ATGCAGGTATGATATATCTT+TGG | 0.268511 | 4.3:-46614169 | MS.gene66786:intron |
| CATTCCTTAAATGGTGTTAA+TGG | 0.274909 | 4.3:-46613872 | MS.gene66786:CDS |
| CAAATCAGGGCAAAATTATA+TGG | 0.283252 | 4.3:-46611992 | MS.gene66786:intron |
| TCTTAATCCCAAATGTATTT+AGG | 0.290851 | 4.3:+46614145 | None:intergenic |
| GTAACTTTACCAACTTTAAC+AGG | 0.313972 | 4.3:+46611029 | None:intergenic |
| TCTTTGGGCCTAAATACATT+TGG | 0.332272 | 4.3:-46614153 | MS.gene66786:CDS |
| GATATGTCCCTTGGAAATAC+TGG | 0.339025 | 4.3:+46610603 | None:intergenic |
| AAGGAATGGCCCAAGTGATA+TGG | 0.346332 | 4.3:+46613887 | None:intergenic |
| TGATATATAGCATCGTTATT+AGG | 0.349661 | 4.3:+46611152 | None:intergenic |
| CTTTGGGCCTAAATACATTT+GGG | 0.357252 | 4.3:-46614152 | MS.gene66786:CDS |
| AGATAAAGCTTCTTAACATT+TGG | 0.358095 | 4.3:+46616707 | None:intergenic |
| TGATTAAAATGGTCTTATCT+TGG | 0.379827 | 4.3:+46616900 | None:intergenic |
| TGCAGGTATGATATATCTTT+GGG | 0.391257 | 4.3:-46614168 | MS.gene66786:intron |
| CCTTTCCCTGGTTGGTCTGA+AGG | 0.399036 | 4.3:-46611851 | MS.gene66786:CDS |
| AACAGAGGATGAAATTAAAA+TGG | 0.399805 | 4.3:-46613783 | MS.gene66786:CDS |
| CAAGCCTTACTTGTTCTTCA+AGG | 0.405207 | 4.3:-46610531 | MS.gene66786:CDS |
| TGAAGATCACTATACATAAG+AGG | 0.410578 | 4.3:+46611107 | None:intergenic |
| GGAAAATTAACATGCTTCCT+TGG | 0.425648 | 4.3:-46611358 | MS.gene66786:CDS |
| TTGATCCCAAGGTGATCAAA+TGG | 0.426070 | 4.3:-46609301 | MS.gene66786:CDS |
| GGACATTTCTCTTGAAGACT+TGG | 0.429707 | 4.3:-46614378 | MS.gene66786:CDS |
| TTTCCATCTTTGTTTATCCA+TGG | 0.431058 | 4.3:+46611053 | None:intergenic |
| TTCTTGAACATTCACCTCCC+TGG | 0.432633 | 4.3:-46609269 | MS.gene66786:CDS |
| TTCTCTTGAAGACTTGGGAT+TGG | 0.433303 | 4.3:-46614372 | MS.gene66786:CDS |
| TCATCCCATTTGATCACCTT+GGG | 0.437558 | 4.3:+46609296 | None:intergenic |
| TTTGTGAATACGTATGTGTT+TGG | 0.438148 | 4.3:+46611965 | None:intergenic |
| ATTGGAAGATTCTATTCTAA+AGG | 0.439684 | 4.3:-46614354 | MS.gene66786:CDS |
| GGACATATCTTGATCTCAAA+AGG | 0.441132 | 4.3:-46610589 | MS.gene66786:CDS |
| AGTGGCACCAGTGATTAAAA+TGG | 0.443195 | 4.3:+46616889 | None:intergenic |
| CTACCAGCCGCATAACAATC+TGG | 0.456645 | 4.3:+46610561 | None:intergenic |
| ATTGTGTGAGTTACAACAGC+TGG | 0.459350 | 4.3:-46613810 | MS.gene66786:CDS |
| GTTCTTGTGCATGTATCAAC+AGG | 0.464567 | 4.3:-46614084 | MS.gene66786:intron |
| TGAAGAACTTGGGTATTAGC+AGG | 0.466197 | 4.3:-46613757 | MS.gene66786:intron |
| GGACTTGTTTAAATGTCTAA+AGG | 0.470373 | 4.3:-46614459 | MS.gene66786:CDS |
| TAAAATGGTCATGAAGAACT+TGG | 0.472656 | 4.3:-46613768 | MS.gene66786:CDS |
| CTGGTTGGTCTGAAGGTGTA+AGG | 0.475279 | 4.3:-46611844 | MS.gene66786:intron |
| TAGAAACCTTTAACATAAGA+AGG | 0.482503 | 4.3:+46610958 | None:intergenic |
| ATCATCCCATTTGATCACCT+TGG | 0.483313 | 4.3:+46609295 | None:intergenic |
| AATGCTTGTGGGACAATTGA+AGG | 0.483673 | 4.3:-46611930 | MS.gene66786:CDS |
| GACAGTTTAGCCGTAGCCTA+TGG | 0.486521 | 4.3:-46611385 | MS.gene66786:CDS |
| TGAGATCAAGATATGTCCCT+TGG | 0.491540 | 4.3:+46610594 | None:intergenic |
| TTAATTTCAGCATATGTATG+TGG | 0.494221 | 4.3:-46613938 | MS.gene66786:intron |
| CTATACTGCTACAATGGAGT+TGG | 0.494470 | 4.3:-46616942 | None:intergenic |
| TGATCCCAAGGTGATCAAAT+GGG | 0.498255 | 4.3:-46609300 | MS.gene66786:CDS |
| TCAAAGAACCTTTCCCTGGT+TGG | 0.502477 | 4.3:-46611859 | MS.gene66786:CDS |
| TATGTATGTGGGGAGGGAGA+AGG | 0.502676 | 4.3:-46613926 | MS.gene66786:CDS |
| TACGTATTCACAAAGGCAAT+GGG | 0.504053 | 4.3:-46611956 | MS.gene66786:CDS |
| ATGTATGTGGGGAGGGAGAA+GGG | 0.514620 | 4.3:-46613925 | MS.gene66786:CDS |
| ACGCCCTTGAAGAACAAGTA+AGG | 0.518384 | 4.3:+46610527 | None:intergenic |
| CATTAACACCATTTAAGGAA+TGG | 0.520795 | 4.3:+46613873 | None:intergenic |
| AAGCCTTACTTGTTCTTCAA+GGG | 0.525598 | 4.3:-46610530 | MS.gene66786:CDS |
| GCACTTTGCCAGTATTTCCA+AGG | 0.525887 | 4.3:-46610611 | MS.gene66786:CDS |
| AAACCATGGATAAACAAAGA+TGG | 0.526126 | 4.3:-46611056 | MS.gene66786:CDS |
| TAATTTCAGCATATGTATGT+GGG | 0.529774 | 4.3:-46613937 | MS.gene66786:intron |
| GACATTTCTCTTGAAGACTT+GGG | 0.532213 | 4.3:-46614377 | MS.gene66786:CDS |
| TATACTGCTACAATGGAGTT+GGG | 0.533868 | 4.3:-46616941 | None:intergenic |
| GAATTCACCACCATGTCAGC+TGG | 0.534357 | 4.3:+46611209 | None:intergenic |
| GATCCAGATTGTTATGCGGC+TGG | 0.541376 | 4.3:-46610564 | MS.gene66786:CDS |
| TTCTCATCGCTTTCACAATG+AGG | 0.543385 | 4.3:-46616654 | MS.gene66786:intron |
| AGAATGTATTTAACCACACC+AGG | 0.543472 | 4.3:+46609251 | None:intergenic |
| GAACATTCACCTCCCTGGTG+TGG | 0.546311 | 4.3:-46609264 | MS.gene66786:CDS |
| GATGGAAAGCCTGTTAAAGT+TGG | 0.546337 | 4.3:-46611038 | MS.gene66786:CDS |
| ACATTCAAAGAACCTTTCCC+TGG | 0.552357 | 4.3:-46611863 | MS.gene66786:CDS |
| GAAAAGTTGACTCTAGTACC+AGG | 0.553432 | 4.3:-46614401 | MS.gene66786:CDS |
| TCAGGGCAAAATTATATGGA+TGG | 0.554758 | 4.3:-46611988 | MS.gene66786:intron |
| TTAGCCGTAGCCTATGGAAA+AGG | 0.556371 | 4.3:-46611379 | MS.gene66786:CDS |
| GACATTTCACAGCAAAACCA+TGG | 0.562023 | 4.3:-46611070 | MS.gene66786:CDS |
| AACGATGCTATATATCATGT+TGG | 0.565095 | 4.3:-46611146 | MS.gene66786:CDS |
| TCAGCATATGTATGTGGGGA+GGG | 0.566541 | 4.3:-46613932 | MS.gene66786:intron |
| TAATCAGATACCAGCTGACA+TGG | 0.568856 | 4.3:-46611219 | MS.gene66786:intron |
| AATGTACTAGTGACAATGGC+TGG | 0.569176 | 4.3:+46611881 | None:intergenic |
| CAAATACAAACTTTGATGAA+AGG | 0.569634 | 4.3:-46614289 | MS.gene66786:intron |
| CACTTTGCCAGTATTTCCAA+GGG | 0.570051 | 4.3:-46610610 | MS.gene66786:CDS |
| ATTAGAGAAACCATATCACT+TGG | 0.570492 | 4.3:-46613897 | MS.gene66786:CDS |
| ATGATTTGCATGAGCTACAA+TGG | 0.570741 | 4.3:+46611175 | None:intergenic |
| TGTTGACGTAGAAGAGAAAG+TGG | 0.570869 | 4.3:-46613843 | MS.gene66786:CDS |
| GAATACAGAGAAGTTAAGAA+TGG | 0.579699 | 4.3:-46609363 | MS.gene66786:CDS |
| GCAATGGGAGAAATGCTTGT+GGG | 0.580683 | 4.3:-46611941 | MS.gene66786:CDS |
| GGCAGCAAGACAAGGTGCGG+TGG | 0.582920 | 4.3:-46609342 | MS.gene66786:CDS |
| AAAATGGTCATGAAGAACTT+GGG | 0.590929 | 4.3:-46613767 | MS.gene66786:CDS |
| AAAAGTTGACTCTAGTACCA+GGG | 0.593504 | 4.3:-46614400 | MS.gene66786:CDS |
| TGTTATGTAGATAATAGGGA+AGG | 0.597823 | 4.3:-46614480 | MS.gene66786:intron |
| ATGCTTGTGGGACAATTGAA+GGG | 0.600919 | 4.3:-46611929 | MS.gene66786:CDS |
| TCTTAATGCAATTGTTGATG+TGG | 0.603354 | 4.3:-46611332 | MS.gene66786:intron |
| CTTACACCTTCAGACCAACC+AGG | 0.605765 | 4.3:+46611845 | None:intergenic |
| ATACGTATTCACAAAGGCAA+TGG | 0.606178 | 4.3:-46611957 | MS.gene66786:CDS |
| TTAAGAATGGCAGCAAGACA+AGG | 0.606337 | 4.3:-46609350 | MS.gene66786:CDS |
| CCTTCAGACCAACCAGGGAA+AGG | 0.608114 | 4.3:+46611851 | None:intergenic |
| AGTTACAGTGTTTAGCAACA+TGG | 0.614148 | 4.3:-46611012 | MS.gene66786:CDS |
| TTGTGTGAGTTACAACAGCT+GGG | 0.616176 | 4.3:-46613809 | MS.gene66786:CDS |
| ACAACAGCTGGGAGCAACAG+AGG | 0.618223 | 4.3:-46613798 | MS.gene66786:CDS |
| TTACACCTTCAGACCAACCA+GGG | 0.619176 | 4.3:+46611846 | None:intergenic |
| GGTGGTGAATTCAATACTAG+TGG | 0.625469 | 4.3:-46611198 | MS.gene66786:CDS |
| TTTGAATGTACTAGTGACAA+TGG | 0.628163 | 4.3:+46611877 | None:intergenic |
| TCTTCAAGAGAAATGTCCCC+TGG | 0.629499 | 4.3:+46614383 | None:intergenic |
| AATTTCAGCATATGTATGTG+GGG | 0.633351 | 4.3:-46613936 | MS.gene66786:intron |
| GGCAATGGGAGAAATGCTTG+TGG | 0.643168 | 4.3:-46611942 | MS.gene66786:CDS |
| AGAACAAGTAAGGCTTGTAG+AGG | 0.643176 | 4.3:+46610537 | None:intergenic |
| TTCAGCATATGTATGTGGGG+AGG | 0.648340 | 4.3:-46613933 | MS.gene66786:intron |
| AATGGCAGCAAGACAAGGTG+CGG | 0.652869 | 4.3:-46609345 | MS.gene66786:CDS |
| TTAGAGAAACCATATCACTT+GGG | 0.677333 | 4.3:-46613896 | MS.gene66786:CDS |
| GAATGTATTTAACCACACCA+GGG | 0.692289 | 4.3:+46609252 | None:intergenic |
| AAAGTTGACTCTAGTACCAG+GGG | 0.697258 | 4.3:-46614399 | MS.gene66786:CDS |
| TCAGATACCAGCTGACATGG+TGG | 0.699544 | 4.3:-46611216 | MS.gene66786:intron |
| GGAAGATCCAGATTGTTATG+CGG | 0.715192 | 4.3:-46610568 | MS.gene66786:CDS |
| AAACACATACGTATTCACAA+AGG | 0.716346 | 4.3:-46611963 | MS.gene66786:CDS |
| CAATTGCATTAAGATCTCCA+AGG | 0.727973 | 4.3:+46611341 | None:intergenic |
| TGTATTTAACCACACCAGGG+AGG | 0.742078 | 4.3:+46609255 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 46609244 | 46616951 | 46609244 | ID=MS.gene66786 |
| chr4.3 | mRNA | 46609244 | 46616951 | 46609244 | ID=MS.gene66786.t1;Parent=MS.gene66786 |
| chr4.3 | exon | 46616873 | 46616951 | 46616873 | ID=MS.gene66786.t1.exon1;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46616873 | 46616951 | 46616873 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46616655 | 46616758 | 46616655 | ID=MS.gene66786.t1.exon2;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46616655 | 46616758 | 46616655 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46614290 | 46614492 | 46614290 | ID=MS.gene66786.t1.exon3;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46614290 | 46614492 | 46614290 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46614085 | 46614185 | 46614085 | ID=MS.gene66786.t1.exon4;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46614085 | 46614185 | 46614085 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46613758 | 46613950 | 46613758 | ID=MS.gene66786.t1.exon5;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46613758 | 46613950 | 46613758 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46611845 | 46612006 | 46611845 | ID=MS.gene66786.t1.exon6;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46611845 | 46612006 | 46611845 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46611333 | 46611414 | 46611333 | ID=MS.gene66786.t1.exon7;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46611333 | 46611414 | 46611333 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46610965 | 46611234 | 46610965 | ID=MS.gene66786.t1.exon8;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46610965 | 46611234 | 46610965 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46610527 | 46610654 | 46610527 | ID=MS.gene66786.t1.exon9;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46610527 | 46610654 | 46610527 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| chr4.3 | exon | 46609244 | 46609397 | 46609244 | ID=MS.gene66786.t1.exon10;Parent=MS.gene66786.t1 |
| chr4.3 | CDS | 46609244 | 46609397 | 46609244 | ID=cds.MS.gene66786.t1;Parent=MS.gene66786.t1 |
| Gene Sequence |
| Protein sequence |
