Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66989.t1 | XP_013451571.1 | 99 | 305 | 3 | 0 | 1 | 305 | 1 | 305 | 7.60E-149 | 536.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66989.t1 | Q8VZU2 | 75.0 | 304 | 72 | 2 | 1 | 302 | 1 | 302 | 3.8e-112 | 406.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66989.t1 | I3T5G8 | 99.0 | 305 | 3 | 0 | 1 | 305 | 1 | 305 | 5.5e-149 | 536.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65117 | MS.gene66989 | PPI |
| MS.gene66989 | MS.gene78212 | PPI |
| MS.gene66057 | MS.gene66989 | PPI |
| MS.gene63514 | MS.gene66989 | PPI |
| MS.gene51627 | MS.gene66989 | PPI |
| MS.gene77217 | MS.gene66989 | PPI |
| MS.gene009458 | MS.gene66989 | PPI |
| MS.gene66989 | MS.gene56256 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66989.t1 | MTR_6g028140 | 99.016 | 305 | 3 | 0 | 1 | 305 | 1 | 305 | 0.0 | 616 |
| MS.gene66989.t1 | MTR_2g088700 | 58.224 | 304 | 122 | 3 | 1 | 299 | 1 | 304 | 4.48e-126 | 362 |
| MS.gene66989.t1 | MTR_2g088700 | 62.171 | 304 | 110 | 3 | 1 | 299 | 1 | 304 | 1.11e-123 | 356 |
| MS.gene66989.t1 | MTR_2g012270 | 45.455 | 297 | 159 | 2 | 1 | 296 | 1 | 295 | 9.67e-92 | 275 |
| MS.gene66989.t1 | MTR_4g090900 | 48.592 | 284 | 138 | 2 | 1 | 280 | 1 | 280 | 6.49e-91 | 273 |
| MS.gene66989.t1 | MTR_1g056550 | 44.792 | 288 | 148 | 3 | 1 | 279 | 1 | 286 | 1.60e-79 | 244 |
| MS.gene66989.t1 | MTR_1g056560 | 47.388 | 268 | 141 | 0 | 32 | 299 | 43 | 310 | 1.68e-79 | 245 |
| MS.gene66989.t1 | MTR_5g012010 | 40.878 | 296 | 157 | 2 | 1 | 278 | 1 | 296 | 2.31e-73 | 228 |
| MS.gene66989.t1 | MTR_7g106420 | 44.939 | 247 | 136 | 0 | 34 | 280 | 28 | 274 | 1.34e-70 | 221 |
| MS.gene66989.t1 | MTR_5g020670 | 32.867 | 286 | 173 | 4 | 1 | 277 | 1 | 276 | 1.04e-42 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66989.t1 | AT3G03800 | 73.856 | 306 | 79 | 1 | 1 | 305 | 1 | 306 | 2.47e-157 | 441 |
| MS.gene66989.t1 | AT3G03800 | 73.856 | 306 | 79 | 1 | 1 | 305 | 1 | 306 | 2.47e-157 | 441 |
| MS.gene66989.t1 | AT5G08080 | 75.000 | 304 | 72 | 2 | 1 | 302 | 1 | 302 | 1.70e-141 | 401 |
| MS.gene66989.t1 | AT5G08080 | 75.000 | 304 | 72 | 2 | 1 | 302 | 1 | 302 | 1.70e-141 | 401 |
| MS.gene66989.t1 | AT5G08080 | 71.111 | 315 | 76 | 4 | 1 | 302 | 1 | 313 | 1.19e-138 | 394 |
| MS.gene66989.t1 | AT4G03330 | 49.296 | 284 | 138 | 2 | 1 | 280 | 1 | 282 | 1.76e-89 | 269 |
| MS.gene66989.t1 | AT3G11820 | 48.421 | 285 | 146 | 1 | 16 | 299 | 25 | 309 | 9.56e-87 | 264 |
| MS.gene66989.t1 | AT5G08080 | 72.772 | 202 | 51 | 2 | 1 | 200 | 1 | 200 | 1.09e-86 | 259 |
| MS.gene66989.t1 | AT5G08080 | 72.772 | 202 | 51 | 2 | 1 | 200 | 1 | 200 | 1.09e-86 | 259 |
| MS.gene66989.t1 | AT1G11250 | 47.500 | 280 | 141 | 2 | 1 | 280 | 1 | 274 | 3.00e-86 | 261 |
| MS.gene66989.t1 | AT1G61290 | 43.421 | 304 | 162 | 3 | 1 | 300 | 1 | 298 | 3.09e-86 | 261 |
| MS.gene66989.t1 | AT1G61290 | 43.421 | 304 | 162 | 3 | 1 | 300 | 1 | 298 | 3.09e-86 | 261 |
| MS.gene66989.t1 | AT3G11820 | 49.265 | 272 | 138 | 0 | 28 | 299 | 7 | 278 | 6.69e-85 | 258 |
| MS.gene66989.t1 | AT3G52400 | 46.753 | 308 | 155 | 2 | 1 | 299 | 1 | 308 | 4.71e-80 | 246 |
| MS.gene66989.t1 | AT1G08560 | 38.966 | 290 | 161 | 5 | 1 | 278 | 1 | 286 | 4.57e-64 | 204 |
| MS.gene66989.t1 | AT2G18260 | 33.762 | 311 | 182 | 8 | 1 | 294 | 1 | 304 | 2.95e-50 | 169 |
| MS.gene66989.t1 | AT2G18260 | 33.762 | 311 | 182 | 8 | 1 | 294 | 1 | 304 | 2.95e-50 | 169 |
Find 63 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAAGATGGCGGAATTTC+AGG | 0.195319 | 6.4:+3727503 | MS.gene66989:CDS |
| CTTGGATAGTTTCTTTAAAA+AGG | 0.215029 | 6.4:+3726138 | MS.gene66989:CDS |
| TATGTCTTTGCAGACATTTA+TGG | 0.224069 | 6.4:+3728272 | MS.gene66989:intron |
| CAAACCATGGGTTACCAAAA+AGG | 0.240236 | 6.4:+3728792 | MS.gene66989:CDS |
| GACATTGAGTTGGGAGAATA+TGG | 0.285392 | 6.4:+3726094 | MS.gene66989:CDS |
| TGCAAAGAAACTCGAGAAAA+TGG | 0.290470 | 6.4:+3728710 | MS.gene66989:CDS |
| GTTGAGAGACGCGTATTTAC+AGG | 0.291706 | 6.4:+3727655 | MS.gene66989:CDS |
| GGAGAATATGGAAGGAATTC+AGG | 0.293975 | 6.4:+3726106 | MS.gene66989:CDS |
| CTTCATGGATGGCTTCTCTC+AGG | 0.356838 | 6.4:-3727618 | None:intergenic |
| ACCCTTCATGGCAGGAGCTT+TGG | 0.358201 | 6.4:-3726526 | None:intergenic |
| TGTCGCAGAATTTGGCTAAT+AGG | 0.360483 | 6.4:+3727104 | MS.gene66989:intron |
| TTTGTCTAGCTCTTCAACTT+TGG | 0.365108 | 6.4:-3727004 | None:intergenic |
| TCATATTAACTAACCCTTCA+TGG | 0.373054 | 6.4:-3726538 | None:intergenic |
| CAGAAGCCTGCTTGTGGAAA+AGG | 0.383390 | 6.4:+3727127 | MS.gene66989:CDS |
| CAACCTCACGATATTCTTCA+TGG | 0.383779 | 6.4:-3727633 | None:intergenic |
| TTACCTGGAGCTTTCTCAAA+AGG | 0.414308 | 6.4:-3726384 | None:intergenic |
| AGGAGCTTTGGTCACAGCCT+TGG | 0.426041 | 6.4:-3726514 | None:intergenic |
| TCACAGCCTTGGACTCCTCA+TGG | 0.443540 | 6.4:-3726503 | None:intergenic |
| ATCCCTCGTGGTCGTGGAGG+TGG | 0.479586 | 6.4:+3726070 | MS.gene66989:CDS |
| TTCATGGATGGCTTCTCTCA+GGG | 0.480734 | 6.4:-3727617 | None:intergenic |
| AGGCAACAATTCCCTTCAAA+AGG | 0.486158 | 6.4:+3728678 | MS.gene66989:CDS |
| TTTGAGATCCCTCGTGGTCG+TGG | 0.486500 | 6.4:+3726064 | MS.gene66989:CDS |
| CACAGCCTTGGACTCCTCAT+GGG | 0.487170 | 6.4:-3726502 | None:intergenic |
| TTGTCGTTGCTGTTCTTGAT+CGG | 0.492202 | 6.4:-3727162 | None:intergenic |
| AAAGAAATTGAAGGAGAAGA+TGG | 0.495934 | 6.4:+3727491 | MS.gene66989:CDS |
| GGAAGGAATTCAGGAGAGCT+TGG | 0.498053 | 6.4:+3726115 | MS.gene66989:CDS |
| GACCAAAGCTCCTGCCATGA+AGG | 0.502565 | 6.4:+3726524 | MS.gene66989:CDS |
| GTCGTTCTTGAATTTCTGCA+AGG | 0.506487 | 6.4:-3728111 | None:intergenic |
| CTCCTCATCAGCTCTTGCGC+CGG | 0.507378 | 6.4:-3727781 | None:intergenic |
| CAGAAGGCTATTCAGGAACA+AGG | 0.521503 | 6.4:+3727931 | MS.gene66989:CDS |
| TGGAGGTGGTGACATTGAGT+TGG | 0.525299 | 6.4:+3726084 | MS.gene66989:CDS |
| ATTAACTAACCCTTCATGGC+AGG | 0.529667 | 6.4:-3726534 | None:intergenic |
| TCAGGAACAAGGACGAGGCC+AGG | 0.529870 | 6.4:+3727942 | MS.gene66989:CDS |
| CTCACGATATTCTTCATGGA+TGG | 0.530670 | 6.4:-3727629 | None:intergenic |
| TGTTTCTGTCATCAAACCAT+GGG | 0.533401 | 6.4:+3728780 | MS.gene66989:CDS |
| TCGTTCTTGAATTTCTGCAA+GGG | 0.536427 | 6.4:-3728110 | None:intergenic |
| ATTGACAGATTAATTGAGAC+CGG | 0.539615 | 6.4:+3727889 | MS.gene66989:CDS |
| GAATTCAGGAGAGCTTGGCT+TGG | 0.539903 | 6.4:+3726120 | MS.gene66989:CDS |
| TGTAGCTATAAAGCAGAGAA+TGG | 0.545023 | 6.4:+3726936 | MS.gene66989:intron |
| TTGTTTCTGTCATCAAACCA+TGG | 0.549299 | 6.4:+3728779 | MS.gene66989:CDS |
| AGTTGAAGAGCTAGACAAAG+AGG | 0.554537 | 6.4:+3727008 | MS.gene66989:CDS |
| GAAACTACTTGATTTACAGC+AGG | 0.556351 | 6.4:+3728159 | MS.gene66989:CDS |
| AACAATGAGAAGTATCATGA+TGG | 0.567362 | 6.4:-3728743 | None:intergenic |
| GGAGGTGGTGACATTGAGTT+GGG | 0.570184 | 6.4:+3726085 | MS.gene66989:CDS |
| GCTTGACAACATAGAATCAC+AGG | 0.577422 | 6.4:+3728329 | MS.gene66989:CDS |
| GGATGCCCATGAGGAGTCCA+AGG | 0.583800 | 6.4:+3726497 | MS.gene66989:intron |
| ACCAAAGCTCCTGCCATGAA+GGG | 0.585683 | 6.4:+3726525 | MS.gene66989:CDS |
| AACCGGCGCAAGAGCTGATG+AGG | 0.586140 | 6.4:+3727779 | MS.gene66989:CDS |
| AATAGGCAGAAGCCTGCTTG+TGG | 0.589592 | 6.4:+3727121 | MS.gene66989:CDS |
| AACAATGAATGATCTTCTAA+CGG | 0.594528 | 6.4:+3724398 | None:intergenic |
| TTGAGTTGGGAGAATATGGA+AGG | 0.601130 | 6.4:+3726098 | MS.gene66989:CDS |
| GAAATTGAAGGAGAAGATGG+CGG | 0.619198 | 6.4:+3727494 | MS.gene66989:CDS |
| GCTATTCAGGAACAAGGACG+AGG | 0.633215 | 6.4:+3727937 | MS.gene66989:CDS |
| AAGCAGTCAGAGATGTTGAG+AGG | 0.633421 | 6.4:+3728137 | MS.gene66989:CDS |
| CGGCGCAAGAGCTGATGAGG+AGG | 0.635231 | 6.4:+3727782 | MS.gene66989:CDS |
| GAGATCCCTCGTGGTCGTGG+AGG | 0.639075 | 6.4:+3726067 | MS.gene66989:CDS |
| GCAGTAGATCATGTGCAGCA+AGG | 0.646558 | 6.4:+3728658 | MS.gene66989:CDS |
| CTTTATGCAGGATGCCCATG+AGG | 0.649549 | 6.4:+3726488 | MS.gene66989:intron |
| TCACCACCTCCACGACCACG+AGG | 0.693877 | 6.4:-3726073 | None:intergenic |
| GCAGTGTTAGTCGATGCACA+AGG | 0.699006 | 6.4:+3728300 | MS.gene66989:CDS |
| CATCCATGAAGAATATCGTG+AGG | 0.699809 | 6.4:+3727630 | MS.gene66989:CDS |
| GAATCGTTTGAGATCCCTCG+TGG | 0.704785 | 6.4:+3726058 | MS.gene66989:CDS |
| CACCACCTCCACGACCACGA+GGG | 0.725442 | 6.4:-3726072 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATAATGTTGAAATT+TGG | - | chr6.4:3727392-3727411 | None:intergenic | 10.0% |
| !! | TAATTATAATGTTGAAATTT+GGG | - | chr6.4:3727391-3727410 | None:intergenic | 10.0% |
| !! | TATAATAAAATAAAAATCAC+CGG | + | chr6.4:3726627-3726646 | MS.gene66989:intron | 10.0% |
| !! | TTCAACATTATAATTATTAT+TGG | + | chr6.4:3727395-3727414 | MS.gene66989:intron | 10.0% |
| !!! | AAAATATTTTGTATAAATAG+TGG | + | chr6.4:3726243-3726262 | MS.gene66989:intron | 10.0% |
| !!! | AATAAAAATTAAATAATGGA+TGG | + | chr6.4:3725423-3725442 | MS.gene66989:intron | 10.0% |
| !!! | AATTTGATTTTTTTTTTTTC+AGG | + | chr6.4:3726036-3726055 | MS.gene66989:intron | 10.0% |
| !!! | TTTTTTTTTATAAATCAAAC+AGG | - | chr6.4:3725364-3725383 | None:intergenic | 10.0% |
| !! | AATTATAATGTTGAAATTTG+GGG | - | chr6.4:3727390-3727409 | None:intergenic | 15.0% |
| !! | ATTGTATAACACAAAAAATA+AGG | - | chr6.4:3727455-3727474 | None:intergenic | 15.0% |
| !! | ATTTATAAAAAAAAAAGCCA+TGG | + | chr6.4:3725369-3725388 | MS.gene66989:intron | 15.0% |
| !! | TTAAATAATAGATAAAACGA+TGG | - | chr6.4:3727201-3727220 | None:intergenic | 15.0% |
| !! | TTATGTTAATCATAAACAAA+AGG | - | chr6.4:3726607-3726626 | None:intergenic | 15.0% |
| !!! | AACAATATTCTAATAGTTTT+AGG | + | chr6.4:3725800-3725819 | MS.gene66989:intron | 15.0% |
| !!! | AAGTTTTGATTTTTTTATGT+GGG | + | chr6.4:3724483-3724502 | MS.gene66989:intron | 15.0% |
| !!! | ATTATAATTATTATTGGCTT+AGG | + | chr6.4:3727401-3727420 | MS.gene66989:intron | 15.0% |
| !!! | ATTGATACTTTTCAATTTTT+AGG | - | chr6.4:3728466-3728485 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCAAATAATTAT+CGG | + | chr6.4:3724935-3724954 | MS.gene66989:intron | 15.0% |
| !!! | TTATAATTATTATTGGCTTA+GGG | + | chr6.4:3727402-3727421 | MS.gene66989:intron | 15.0% |
| !!! | TTATTAATGGATAATAGTTT+TGG | + | chr6.4:3725465-3725484 | MS.gene66989:intron | 15.0% |
| !!! | TTGATACTTTTCAATTTTTA+GGG | - | chr6.4:3728465-3728484 | None:intergenic | 15.0% |
| !!! | TTTACTTGAATTTTCATTAA+TGG | + | chr6.4:3727811-3727830 | MS.gene66989:intron | 15.0% |
| !! | AACTTTGTAAATACCTAAAA+GGG | - | chr6.4:3725524-3725543 | None:intergenic | 20.0% |
| !! | TTCATATCAATAACACTTAT+AGG | - | chr6.4:3726849-3726868 | None:intergenic | 20.0% |
| !!! | ATTCTAATAGTTTTAGGTTT+TGG | + | chr6.4:3725806-3725825 | MS.gene66989:intron | 20.0% |
| !!! | CAAGTTTTGATTTTTTTATG+TGG | + | chr6.4:3724482-3724501 | MS.gene66989:intron | 20.0% |
| !!! | TAACTTGATTTGGTTATTAA+TGG | + | chr6.4:3725452-3725471 | MS.gene66989:intron | 20.0% |
| !!! | TATAATTATTATTGGCTTAG+GGG | + | chr6.4:3727403-3727422 | MS.gene66989:intron | 20.0% |
| !!! | TATTTTGTATAAATAGTGGA+TGG | + | chr6.4:3726247-3726266 | MS.gene66989:intron | 20.0% |
| !!! | TTTTTTTTGTTATGCTTGTT+TGG | + | chr6.4:3724595-3724614 | MS.gene66989:intron | 20.0% |
| ! | AAATAAGGTAAATACGAGTT+CGG | - | chr6.4:3727440-3727459 | None:intergenic | 25.0% |
| ! | ACCAGAGAAAACATAAAATA+AGG | - | chr6.4:3727743-3727762 | None:intergenic | 25.0% |
| ! | AGAAAGAATTACATCAAAGA+AGG | - | chr6.4:3726663-3726682 | None:intergenic | 25.0% |
| ! | AGAGTAGTCTATGAAAATAT+TGG | - | chr6.4:3725736-3725755 | None:intergenic | 25.0% |
| ! | ATTGATATGAAGAAGGATTT+GGG | + | chr6.4:3726858-3726877 | MS.gene66989:intron | 25.0% |
| ! | ATTTACAGCAGGTATTTAAT+CGG | + | chr6.4:3728170-3728189 | MS.gene66989:intron | 25.0% |
| ! | CTATTCATAAACTTCAAAAC+AGG | - | chr6.4:3726885-3726904 | None:intergenic | 25.0% |
| ! | GAAAGAATTACATCAAAGAA+GGG | - | chr6.4:3726662-3726681 | None:intergenic | 25.0% |
| ! | GAACTTTGTAAATACCTAAA+AGG | - | chr6.4:3725525-3725544 | None:intergenic | 25.0% |
| ! | TATTGATATGAAGAAGGATT+TGG | + | chr6.4:3726857-3726876 | MS.gene66989:intron | 25.0% |
| ! | TGACTAATTTGATCAAATTC+AGG | + | chr6.4:3728627-3728646 | MS.gene66989:intron | 25.0% |
| ! | TTAGGTATTTACAAAGTTCA+AGG | + | chr6.4:3725526-3725545 | MS.gene66989:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr6.4:3724910-3724929 | None:intergenic | 25.0% |
| ! | TTTCAAATGTTCGAACTATA+TGG | + | chr6.4:3728500-3728519 | MS.gene66989:intron | 25.0% |
| !! | AAGTGTTATTGATATGAAGA+AGG | + | chr6.4:3726851-3726870 | MS.gene66989:intron | 25.0% |
| !! | AATATGTTTTCAGAAACTTC+TGG | - | chr6.4:3727273-3727292 | None:intergenic | 25.0% |
| !! | AGATCTAGGTTTTTGAATAA+TGG | + | chr6.4:3724513-3724532 | MS.gene66989:intron | 25.0% |
| !! | ATTTAGGTTATGGATAATGT+TGG | + | chr6.4:3724718-3724737 | MS.gene66989:intron | 25.0% |
| !! | CCATTTTCTCAAATTATTAC+CGG | + | chr6.4:3725642-3725661 | MS.gene66989:intron | 25.0% |
| !! | CTTGGATAGTTTCTTTAAAA+AGG | + | chr6.4:3726138-3726157 | MS.gene66989:CDS | 25.0% |
| !! | GAGTTATCTTTTGTAGATAA+TGG | + | chr6.4:3728084-3728103 | MS.gene66989:intron | 25.0% |
| !! | GATCTAGGTTTTTGAATAAT+GGG | + | chr6.4:3724514-3724533 | MS.gene66989:intron | 25.0% |
| !! | TTGTAGTTGTATTTAGGTTA+TGG | + | chr6.4:3724708-3724727 | MS.gene66989:intron | 25.0% |
| !!! | ACAATTGAAAGTTTTGAAGA+TGG | - | chr6.4:3728552-3728571 | None:intergenic | 25.0% |
| !!! | AGATGTTTTTGTTCTGAAAT+TGG | + | chr6.4:3724771-3724790 | MS.gene66989:intron | 25.0% |
| !!! | TTAGCATTGATTTTTGTCTA+TGG | + | chr6.4:3725144-3725163 | MS.gene66989:intron | 25.0% |
| !!! | TTTTTATCTTGATTCGATGA+TGG | - | chr6.4:3728381-3728400 | None:intergenic | 25.0% |
| !!! | TTTTTGTGTTTAGTGTTGTT+GGG | + | chr6.4:3724546-3724565 | MS.gene66989:intron | 25.0% |
| AAAAACTGAACTGTATCAGA+CGG | + | chr6.4:3725028-3725047 | MS.gene66989:intron | 30.0% | |
| AAAGAAATTGAAGGAGAAGA+TGG | + | chr6.4:3727491-3727510 | MS.gene66989:CDS | 30.0% | |
| AAAGCAAAATCTACCTTGTA+AGG | + | chr6.4:3728046-3728065 | MS.gene66989:intron | 30.0% | |
| AAATTGAGGGTTGTTGAATT+TGG | + | chr6.4:3724622-3724641 | MS.gene66989:intron | 30.0% | |
| AAGATGTGGATAGTTTAACT+AGG | + | chr6.4:3725967-3725986 | MS.gene66989:intron | 30.0% | |
| AATCGTTGAATGTCAAAATC+AGG | - | chr6.4:3727997-3728016 | None:intergenic | 30.0% | |
| AGAAAACATAAAATAAGGCG+AGG | - | chr6.4:3727738-3727757 | None:intergenic | 30.0% | |
| AGACCTTAATAGTGCTTAAA+AGG | + | chr6.4:3725847-3725866 | MS.gene66989:intron | 30.0% | |
| AGTCAAAATAGTCTCTGATA+CGG | + | chr6.4:3728573-3728592 | MS.gene66989:intron | 30.0% | |
| ATCGTTGAATGTCAAAATCA+GGG | - | chr6.4:3727996-3728015 | None:intergenic | 30.0% | |
| ATTAAGGTCTATCTAGTGAT+AGG | - | chr6.4:3725837-3725856 | None:intergenic | 30.0% | |
| ATTGACAGATTAATTGAGAC+CGG | + | chr6.4:3727889-3727908 | MS.gene66989:CDS | 30.0% | |
| CCACGGTAAAATTAATTGAA+AGG | - | chr6.4:3728197-3728216 | None:intergenic | 30.0% | |
| CCGGTAATAATTTGAGAAAA+TGG | - | chr6.4:3725645-3725664 | None:intergenic | 30.0% | |
| CTATTGAACGATTAATCCAT+AGG | - | chr6.4:3726326-3726345 | None:intergenic | 30.0% | |
| GATCTCTACTAAAAGTCTTT+CGG | + | chr6.4:3727034-3727053 | MS.gene66989:intron | 30.0% | |
| GGTTGTTTATTTGAGCAATT+CGG | + | chr6.4:3725250-3725269 | MS.gene66989:intron | 30.0% | |
| TATGTCTTTGCAGACATTTA+TGG | + | chr6.4:3728272-3728291 | MS.gene66989:intron | 30.0% | |
| TCATATTAACTAACCCTTCA+TGG | - | chr6.4:3726541-3726560 | None:intergenic | 30.0% | |
| TCTCAAATAATTATCGGTGT+CGG | + | chr6.4:3724941-3724960 | MS.gene66989:intron | 30.0% | |
| TCTCAAATTATTACCGGTAT+TGG | + | chr6.4:3725648-3725667 | MS.gene66989:intron | 30.0% | |
| TGCCTTGAAAAAGAAATTGA+AGG | + | chr6.4:3727482-3727501 | MS.gene66989:CDS | 30.0% | |
| TTGATATGAAGAAGGATTTG+GGG | + | chr6.4:3726859-3726878 | MS.gene66989:intron | 30.0% | |
| ! | AATTATTTCCGTAAGTGTTG+AGG | - | chr6.4:3726741-3726760 | None:intergenic | 30.0% |
| ! | ATGTAGTCTTAGTAAAGATG+TGG | + | chr6.4:3725953-3725972 | MS.gene66989:intron | 30.0% |
| ! | ATTTTACAGGCATCTAATGT+CGG | + | chr6.4:3725906-3725925 | MS.gene66989:intron | 30.0% |
| ! | CCTTTCAATTAATTTTACCG+TGG | + | chr6.4:3728194-3728213 | MS.gene66989:intron | 30.0% |
| ! | CTATGGATTAATCGTTCAAT+AGG | + | chr6.4:3726324-3726343 | MS.gene66989:intron | 30.0% |
| ! | GTTTTTGTGTTTAGTGTTGT+TGG | + | chr6.4:3724545-3724564 | MS.gene66989:intron | 30.0% |
| ! | TAACTCACTGAATTTTCCTA+TGG | + | chr6.4:3726307-3726326 | MS.gene66989:intron | 30.0% |
| ! | TCGATACTTTTCAGTTTTCA+AGG | - | chr6.4:3728527-3728546 | None:intergenic | 30.0% |
| ! | TGACCTTTTAAGCACTATTA+AGG | - | chr6.4:3725853-3725872 | None:intergenic | 30.0% |
| ! | TGATTCGATTTTTGAATGCT+GGG | + | chr6.4:3725330-3725349 | MS.gene66989:intron | 30.0% |
| ! | TTTTTGTGATTGTCAGTAAC+CGG | + | chr6.4:3727762-3727781 | MS.gene66989:intron | 30.0% |
| !! | AACAATGAGAAGTATCATGA+TGG | - | chr6.4:3728746-3728765 | None:intergenic | 30.0% |
| !! | AATTTTTCAGAAGGCTATTC+AGG | + | chr6.4:3727924-3727943 | MS.gene66989:CDS | 30.0% |
| !! | ATGGAGCATTTAACTTGATT+TGG | + | chr6.4:3725442-3725461 | MS.gene66989:intron | 30.0% |
| !! | CTCCTTCAATTTCTTTTTCA+AGG | - | chr6.4:3727487-3727506 | None:intergenic | 30.0% |
| !! | TACTATACCGTAATTTGTTG+AGG | - | chr6.4:3728235-3728254 | None:intergenic | 30.0% |
| !! | TTGATTCGATTTTTGAATGC+TGG | + | chr6.4:3725329-3725348 | MS.gene66989:intron | 30.0% |
| !!! | ATCTGGTTTTTTGGATTAAG+AGG | + | chr6.4:3724648-3724667 | MS.gene66989:intron | 30.0% |
| !!! | ATTTGGTGAATCTGGTTTTT+TGG | + | chr6.4:3724639-3724658 | MS.gene66989:intron | 30.0% |
| !!! | GCCTTATTTTATGTTTTCTC+TGG | + | chr6.4:3727739-3727758 | MS.gene66989:intron | 30.0% |
| !!! | TCTGGTTTTTTGGATTAAGA+GGG | + | chr6.4:3724649-3724668 | MS.gene66989:intron | 30.0% |
| !!! | TTGGTGTTGGTTTTTGTTTA+AGG | + | chr6.4:3724790-3724809 | MS.gene66989:intron | 30.0% |
| !!! | TTTTGTTCTGAAATTGGTGT+TGG | + | chr6.4:3724777-3724796 | MS.gene66989:intron | 30.0% |
| AACGAAATCGTATACAGTGT+CGG | - | chr6.4:3725081-3725100 | None:intergenic | 35.0% | |
| AAGGCGAGGTAATTAATCAA+CGG | - | chr6.4:3727724-3727743 | None:intergenic | 35.0% | |
| ACATTATGTGTCGCAGAATT+TGG | + | chr6.4:3727096-3727115 | MS.gene66989:intron | 35.0% | |
| ACGAAGTCATGACATAATCA+CGG | - | chr6.4:3725697-3725716 | None:intergenic | 35.0% | |
| AGGGATGGAATGAAGAAATA+AGG | - | chr6.4:3727977-3727996 | None:intergenic | 35.0% | |
| ATAGTGCTTAAAAGGTCATG+TGG | + | chr6.4:3725855-3725874 | MS.gene66989:intron | 35.0% | |
| ATGTGAGAGATAACCTTACA+AGG | - | chr6.4:3728062-3728081 | None:intergenic | 35.0% | |
| ATTCTTAGACCTCAACAAGT+AGG | - | chr6.4:3727319-3727338 | None:intergenic | 35.0% | |
| CAAAAATCGAATCAAACCTC+CGG | - | chr6.4:3725324-3725343 | None:intergenic | 35.0% | |
| CCAAACATTGTTACTATCCA+TGG | - | chr6.4:3725389-3725408 | None:intergenic | 35.0% | |
| CCATGGATAGTAACAATGTT+TGG | + | chr6.4:3725386-3725405 | MS.gene66989:intron | 35.0% | |
| CTTGTTTGGCAAGAAATTGA+GGG | + | chr6.4:3724609-3724628 | MS.gene66989:intron | 35.0% | |
| CTTTACTAAGACTACATGCT+CGG | - | chr6.4:3725950-3725969 | None:intergenic | 35.0% | |
| GAAACTACTTGATTTACAGC+AGG | + | chr6.4:3728159-3728178 | MS.gene66989:CDS | 35.0% | |
| GCTGCATTGTAGTTGTATTT+AGG | + | chr6.4:3724702-3724721 | MS.gene66989:intron | 35.0% | |
| GTAGTCAAACAAAAGTTACC+TGG | - | chr6.4:3726402-3726421 | None:intergenic | 35.0% | |
| GTGTTGAGGCTATCAAAAAA+GGG | - | chr6.4:3726727-3726746 | None:intergenic | 35.0% | |
| TAGGTTATGGATAATGTTGG+TGG | + | chr6.4:3724721-3724740 | MS.gene66989:intron | 35.0% | |
| TCGTTCTTGAATTTCTGCAA+GGG | - | chr6.4:3728113-3728132 | None:intergenic | 35.0% | |
| TGCAAAGAAACTCGAGAAAA+TGG | + | chr6.4:3728710-3728729 | MS.gene66989:CDS | 35.0% | |
| TGCATTCAACACAAGCATAT+TGG | - | chr6.4:3725588-3725607 | None:intergenic | 35.0% | |
| TGGAAGAAAATGTGTGCTTA+AGG | + | chr6.4:3727831-3727850 | MS.gene66989:intron | 35.0% | |
| TGGTGTACCTCAACAAATTA+CGG | + | chr6.4:3728225-3728244 | MS.gene66989:intron | 35.0% | |
| TGTAGCTATAAAGCAGAGAA+TGG | + | chr6.4:3726936-3726955 | MS.gene66989:intron | 35.0% | |
| TGTTGAGGCTATCAAAAAAG+GGG | - | chr6.4:3726726-3726745 | None:intergenic | 35.0% | |
| TTATTTGAGCAATTCGGTCA+CGG | + | chr6.4:3725256-3725275 | MS.gene66989:intron | 35.0% | |
| TTGAATGTCAAAATCAGGGA+TGG | - | chr6.4:3727992-3728011 | None:intergenic | 35.0% | |
| ! | AAAAATTTGTTCGCTGTCTC+CGG | - | chr6.4:3727911-3727930 | None:intergenic | 35.0% |
| ! | AAACCATGGGTTACCAAAAA+GGG | + | chr6.4:3728793-3728812 | MS.gene66989:CDS | 35.0% |
| ! | AGTGTTGAGGCTATCAAAAA+AGG | - | chr6.4:3726728-3726747 | None:intergenic | 35.0% |
| ! | ATGTGGGTTTGTTTAGATCT+AGG | + | chr6.4:3724499-3724518 | MS.gene66989:intron | 35.0% |
| ! | ATTTTACCGTGGTACATGTA+TGG | + | chr6.4:3728205-3728224 | MS.gene66989:intron | 35.0% |
| ! | CATCTTCTTTGCCTTTTGAA+GGG | - | chr6.4:3728692-3728711 | None:intergenic | 35.0% |
| ! | GTAATTATATGTGTCGGTGT+CGG | - | chr6.4:3724904-3724923 | None:intergenic | 35.0% |
| ! | GTTGTTGAATTTGGTGAATC+TGG | + | chr6.4:3724631-3724650 | MS.gene66989:intron | 35.0% |
| ! | GTTGTTGGGTTGTTTAGATT+TGG | + | chr6.4:3724560-3724579 | MS.gene66989:intron | 35.0% |
| ! | TGTTTCTGTCATCAAACCAT+GGG | + | chr6.4:3728780-3728799 | MS.gene66989:CDS | 35.0% |
| ! | TTCTGAACTATGACCCTTTT+AGG | + | chr6.4:3725508-3725527 | MS.gene66989:intron | 35.0% |
| ! | TTGGATTAAGAGGGAGATTT+TGG | + | chr6.4:3724658-3724677 | MS.gene66989:intron | 35.0% |
| ! | TTTGATAGCCTCAACACTTA+CGG | + | chr6.4:3726730-3726749 | MS.gene66989:intron | 35.0% |
| ! | TTTTGTGCAAACCTTTATGC+AGG | + | chr6.4:3726476-3726495 | MS.gene66989:intron | 35.0% |
| !! | AAACGTATGAAGCACTGATA+CGG | - | chr6.4:3724991-3725010 | None:intergenic | 35.0% |
| !! | CAGCGAACAAATTTTTCAGA+AGG | + | chr6.4:3727915-3727934 | MS.gene66989:CDS | 35.0% |
| !! | GCTCATGCTTTGAATTTTAC+AGG | + | chr6.4:3725893-3725912 | MS.gene66989:intron | 35.0% |
| !! | TCAATTTTTAGGGACCAAGT+AGG | - | chr6.4:3728455-3728474 | None:intergenic | 35.0% |
| !! | TTGTTTCTGTCATCAAACCA+TGG | + | chr6.4:3728779-3728798 | MS.gene66989:CDS | 35.0% |
| !! | TTTGTCTAGCTCTTCAACTT+TGG | - | chr6.4:3727007-3727026 | None:intergenic | 35.0% |
| !!! | TAATGTTGGTGGATTTTTCG+TGG | + | chr6.4:3724732-3724751 | MS.gene66989:intron | 35.0% |
| AAAGCAGTTGAAACATGAGC+CGG | + | chr6.4:3725302-3725321 | MS.gene66989:intron | 40.0% | |
| AGCAGAATACACTTGCACTA+AGG | + | chr6.4:3725766-3725785 | MS.gene66989:intron | 40.0% | |
| AGGCAACAATTCCCTTCAAA+AGG | + | chr6.4:3728678-3728697 | MS.gene66989:CDS | 40.0% | |
| AGGCGAGGTAATTAATCAAC+GGG | - | chr6.4:3727723-3727742 | None:intergenic | 40.0% | |
| AGTTGAAGAGCTAGACAAAG+AGG | + | chr6.4:3727008-3727027 | MS.gene66989:CDS | 40.0% | |
| ATTAACTAACCCTTCATGGC+AGG | - | chr6.4:3726537-3726556 | None:intergenic | 40.0% | |
| CAACCTCACGATATTCTTCA+TGG | - | chr6.4:3727636-3727655 | None:intergenic | 40.0% | |
| CATCCATGAAGAATATCGTG+AGG | + | chr6.4:3727630-3727649 | MS.gene66989:CDS | 40.0% | |
| CTAACCGATCCTTACAAAAC+TGG | - | chr6.4:3727366-3727385 | None:intergenic | 40.0% | |
| CTCACGATATTCTTCATGGA+TGG | - | chr6.4:3727632-3727651 | None:intergenic | 40.0% | |
| GAAATAAGGAGAGATGAACC+TGG | - | chr6.4:3727963-3727982 | None:intergenic | 40.0% | |
| GAAATTGAAGGAGAAGATGG+CGG | + | chr6.4:3727494-3727513 | MS.gene66989:CDS | 40.0% | |
| GCTTGACAACATAGAATCAC+AGG | + | chr6.4:3728329-3728348 | MS.gene66989:CDS | 40.0% | |
| GCTTGTTTGGCAAGAAATTG+AGG | + | chr6.4:3724608-3724627 | MS.gene66989:intron | 40.0% | |
| GGAAGTGATTGCATAACTCA+AGG | - | chr6.4:3725624-3725643 | None:intergenic | 40.0% | |
| GGAGAATATGGAAGGAATTC+AGG | + | chr6.4:3726106-3726125 | MS.gene66989:CDS | 40.0% | |
| GTCGTTCTTGAATTTCTGCA+AGG | - | chr6.4:3728114-3728133 | None:intergenic | 40.0% | |
| TAAACAACCCTAGACAGTGT+AGG | - | chr6.4:3725239-3725258 | None:intergenic | 40.0% | |
| TCTGTGTTTCCTATGAAGCA+CGG | + | chr6.4:3724832-3724851 | MS.gene66989:intron | 40.0% | |
| TGTCGCAGAATTTGGCTAAT+AGG | + | chr6.4:3727104-3727123 | MS.gene66989:intron | 40.0% | |
| TTACCTGGAGCTTTCTCAAA+AGG | - | chr6.4:3726387-3726406 | None:intergenic | 40.0% | |
| ! | CAAACCATGGGTTACCAAAA+AGG | + | chr6.4:3728792-3728811 | MS.gene66989:CDS | 40.0% |
| ! | GATGTCATTCCTACTTGTTG+AGG | + | chr6.4:3727307-3727326 | MS.gene66989:intron | 40.0% |
| ! | GCATCTTCTTTGCCTTTTGA+AGG | - | chr6.4:3728693-3728712 | None:intergenic | 40.0% |
| ! | TGCGTGCTTTTACTCAAACA+CGG | - | chr6.4:3728430-3728449 | None:intergenic | 40.0% |
| ! | TGCTTTAAACCGCTTGAATC+AGG | - | chr6.4:3725288-3725307 | None:intergenic | 40.0% |
| ! | TTGTCGTTGCTGTTCTTGAT+CGG | - | chr6.4:3727165-3727184 | None:intergenic | 40.0% |
| !! | ATGAAGCACTGATACGGATA+CGG | - | chr6.4:3724985-3725004 | None:intergenic | 40.0% |
| !! | CAAGCCAGTTTTGTAAGGAT+CGG | + | chr6.4:3727359-3727378 | MS.gene66989:intron | 40.0% |
| !! | CAGTTTTGTAAGGATCGGTT+AGG | + | chr6.4:3727364-3727383 | MS.gene66989:intron | 40.0% |
| !! | CCTTACAAAACTGGCTTGTA+AGG | - | chr6.4:3727357-3727376 | None:intergenic | 40.0% |
| !! | CCTTACAAGCCAGTTTTGTA+AGG | + | chr6.4:3727354-3727373 | MS.gene66989:intron | 40.0% |
| !! | GACATTGAGTTGGGAGAATA+TGG | + | chr6.4:3726094-3726113 | MS.gene66989:CDS | 40.0% |
| !! | TAACCTTTTGAGAAAGCTCC+AGG | + | chr6.4:3726381-3726400 | MS.gene66989:CDS | 40.0% |
| !! | TTGAGTTGGGAGAATATGGA+AGG | + | chr6.4:3726098-3726117 | MS.gene66989:CDS | 40.0% |
| !!! | TTGGTGGATTTTTCGTGGTT+TGG | + | chr6.4:3724737-3724756 | MS.gene66989:intron | 40.0% |
| AAGCAGTCAGAGATGTTGAG+AGG | + | chr6.4:3728137-3728156 | MS.gene66989:CDS | 45.0% | |
| ACCATGAACCTACACTGTCT+AGG | + | chr6.4:3725228-3725247 | MS.gene66989:intron | 45.0% | |
| ACTGATACGGATACGGACAT+CGG | - | chr6.4:3724978-3724997 | None:intergenic | 45.0% | |
| ACTGTATCAGACGGTTCAAC+TGG | + | chr6.4:3725037-3725056 | MS.gene66989:intron | 45.0% | |
| CAAAGAAGGGATGTATGAGC+CGG | - | chr6.4:3726649-3726668 | None:intergenic | 45.0% | |
| CAGAAGGCTATTCAGGAACA+AGG | + | chr6.4:3727931-3727950 | MS.gene66989:CDS | 45.0% | |
| CCATGAACCTACACTGTCTA+GGG | + | chr6.4:3725229-3725248 | MS.gene66989:intron | 45.0% | |
| CGCTCTCGCGAAACATTTAT+AGG | + | chr6.4:3726430-3726449 | MS.gene66989:intron | 45.0% | |
| GATTAGGCGTGTCCTAGTTT+CGG | + | chr6.4:3724865-3724884 | MS.gene66989:intron | 45.0% | |
| GGCGAGGTAATTAATCAACG+GGG | - | chr6.4:3727722-3727741 | None:intergenic | 45.0% | |
| GGTACACCATACATGTACCA+CGG | - | chr6.4:3728214-3728233 | None:intergenic | 45.0% | |
| GTAGGTTCATGGTTCAGCTT+CGG | - | chr6.4:3725221-3725240 | None:intergenic | 45.0% | |
| GTTGAGAGACGCGTATTTAC+AGG | + | chr6.4:3727655-3727674 | MS.gene66989:CDS | 45.0% | |
| TACGACACATGTCCGAAACT+AGG | - | chr6.4:3724880-3724899 | None:intergenic | 45.0% | |
| TGACAGTGACACACCAATAC+CGG | - | chr6.4:3725664-3725683 | None:intergenic | 45.0% | |
| TTCATGGATGGCTTCTCTCA+GGG | - | chr6.4:3727620-3727639 | None:intergenic | 45.0% | |
| TTCATGGTTCAGCTTCGGTT+CGG | - | chr6.4:3725216-3725235 | None:intergenic | 45.0% | |
| ! | GCGTGCTTTTACTCAAACAC+GGG | - | chr6.4:3728429-3728448 | None:intergenic | 45.0% |
| ! | TAAAAGCACGCAGACCTACT+TGG | + | chr6.4:3728438-3728457 | MS.gene66989:intron | 45.0% |
| !! | CAAAACTGGCTTGTAAGGTG+AGG | - | chr6.4:3727352-3727371 | None:intergenic | 45.0% |
| !! | CGGTTTTGTCCTGATTCAAG+CGG | + | chr6.4:3725276-3725295 | MS.gene66989:intron | 45.0% |
| !! | ATCAAATAAAAATTAAATAA+TGG | + | chr6.4:3725419-3725438 | MS.gene66989:intron | 5.0% |
| !!! | AAATATTTTGATTAATTAAT+AGG | - | chr6.4:3726232-3726251 | None:intergenic | 5.0% |
| AATAGGCAGAAGCCTGCTTG+TGG | + | chr6.4:3727121-3727140 | MS.gene66989:CDS | 50.0% | |
| ACAGGCATCTAATGTCGGTG+CGG | + | chr6.4:3725911-3725930 | MS.gene66989:intron | 50.0% | |
| ACCAAAGCTCCTGCCATGAA+GGG | + | chr6.4:3726525-3726544 | MS.gene66989:CDS | 50.0% | |
| ACTAGGACACGCCTAATCTG+AGG | - | chr6.4:3724863-3724882 | None:intergenic | 50.0% | |
| CAGAAGCCTGCTTGTGGAAA+AGG | + | chr6.4:3727127-3727146 | MS.gene66989:CDS | 50.0% | |
| CCCTAGACAGTGTAGGTTCA+TGG | - | chr6.4:3725232-3725251 | None:intergenic | 50.0% | |
| CTCATGGGCATCCTGCATAA+AGG | - | chr6.4:3726490-3726509 | None:intergenic | 50.0% | |
| CTTCATGGATGGCTTCTCTC+AGG | - | chr6.4:3727621-3727640 | None:intergenic | 50.0% | |
| CTTTATGCAGGATGCCCATG+AGG | + | chr6.4:3726488-3726507 | MS.gene66989:intron | 50.0% | |
| GAATTCAGGAGAGCTTGGCT+TGG | + | chr6.4:3726120-3726139 | MS.gene66989:CDS | 50.0% | |
| GCAGTAGATCATGTGCAGCA+AGG | + | chr6.4:3728658-3728677 | MS.gene66989:CDS | 50.0% | |
| GCAGTGTTAGTCGATGCACA+AGG | + | chr6.4:3728300-3728319 | MS.gene66989:CDS | 50.0% | |
| GCTATTCAGGAACAAGGACG+AGG | + | chr6.4:3727937-3727956 | MS.gene66989:CDS | 50.0% | |
| GGAAGGAATTCAGGAGAGCT+TGG | + | chr6.4:3726115-3726134 | MS.gene66989:CDS | 50.0% | |
| GGAGGTGGTGACATTGAGTT+GGG | + | chr6.4:3726085-3726104 | MS.gene66989:CDS | 50.0% | |
| TGGAGGTGGTGACATTGAGT+TGG | + | chr6.4:3726084-3726103 | MS.gene66989:CDS | 50.0% | |
| ! | GAATCGTTTGAGATCCCTCG+TGG | + | chr6.4:3726058-3726077 | MS.gene66989:CDS | 50.0% |
| ! | GCTGATCCTTTTCCACAAGC+AGG | - | chr6.4:3727136-3727155 | None:intergenic | 50.0% |
| !! | GCACCCTTTTTGGTAACCCA+TGG | - | chr6.4:3728799-3728818 | None:intergenic | 50.0% |
| !! | GGAGAAGATGGCGGAATTTC+AGG | + | chr6.4:3727503-3727522 | MS.gene66989:CDS | 50.0% |
| ACCCTTCATGGCAGGAGCTT+TGG | - | chr6.4:3726529-3726548 | None:intergenic | 55.0% | |
| CACAGCCTTGGACTCCTCAT+GGG | - | chr6.4:3726505-3726524 | None:intergenic | 55.0% | |
| CAGGCATCTAATGTCGGTGC+GGG | + | chr6.4:3725912-3725931 | MS.gene66989:intron | 55.0% | |
| GACCAAAGCTCCTGCCATGA+AGG | + | chr6.4:3726524-3726543 | MS.gene66989:CDS | 55.0% | |
| GCACGGACACTCCTCAGATT+AGG | + | chr6.4:3724849-3724868 | MS.gene66989:intron | 55.0% | |
| GCAGTTGAAACATGAGCCGG+AGG | + | chr6.4:3725305-3725324 | MS.gene66989:intron | 55.0% | |
| TCACAGCCTTGGACTCCTCA+TGG | - | chr6.4:3726506-3726525 | None:intergenic | 55.0% | |
| ! | AGGAGCTTTGGTCACAGCCT+TGG | - | chr6.4:3726517-3726536 | None:intergenic | 55.0% |
| ! | TTTGAGATCCCTCGTGGTCG+TGG | + | chr6.4:3726064-3726083 | MS.gene66989:CDS | 55.0% |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | - | chr6.4:3724844-3724863 | None:intergenic | 55.0% |
| !! | TCGTATACAGTGTCGGCGCA+CGG | - | chr6.4:3725074-3725093 | None:intergenic | 55.0% |
| AACCGGCGCAAGAGCTGATG+AGG | + | chr6.4:3727779-3727798 | MS.gene66989:CDS | 60.0% | |
| CTCCTCATCAGCTCTTGCGC+CGG | - | chr6.4:3727784-3727803 | None:intergenic | 60.0% | |
| GGATGCCCATGAGGAGTCCA+AGG | + | chr6.4:3726497-3726516 | MS.gene66989:intron | 60.0% | |
| TCAGGAACAAGGACGAGGCC+AGG | + | chr6.4:3727942-3727961 | MS.gene66989:CDS | 60.0% | |
| ATCCCTCGTGGTCGTGGAGG+TGG | + | chr6.4:3726070-3726089 | MS.gene66989:CDS | 65.0% | |
| CACCACCTCCACGACCACGA+GGG | - | chr6.4:3726075-3726094 | None:intergenic | 65.0% | |
| CGGCGCAAGAGCTGATGAGG+AGG | + | chr6.4:3727782-3727801 | MS.gene66989:CDS | 65.0% | |
| GAGATCCCTCGTGGTCGTGG+AGG | + | chr6.4:3726067-3726086 | MS.gene66989:CDS | 65.0% | |
| TCACCACCTCCACGACCACG+AGG | - | chr6.4:3726076-3726095 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 3724402 | 3728822 | 3724402 | ID=MS.gene66989 |
| chr6.4 | mRNA | 3724402 | 3728822 | 3724402 | ID=MS.gene66989.t1;Parent=MS.gene66989 |
| chr6.4 | exon | 3724402 | 3724419 | 3724402 | ID=MS.gene66989.t1.exon1;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3724402 | 3724419 | 3724402 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3726058 | 3726159 | 3726058 | ID=MS.gene66989.t1.exon2;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3726058 | 3726159 | 3726058 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3726346 | 3726402 | 3726346 | ID=MS.gene66989.t1.exon3;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3726346 | 3726402 | 3726346 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3726498 | 3726546 | 3726498 | ID=MS.gene66989.t1.exon4;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3726498 | 3726546 | 3726498 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3726941 | 3727029 | 3726941 | ID=MS.gene66989.t1.exon5;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3726941 | 3727029 | 3726941 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3727112 | 3727185 | 3727112 | ID=MS.gene66989.t1.exon6;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3727112 | 3727185 | 3727112 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3727482 | 3727524 | 3727482 | ID=MS.gene66989.t1.exon7;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3727482 | 3727524 | 3727482 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3727616 | 3727676 | 3727616 | ID=MS.gene66989.t1.exon8;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3727616 | 3727676 | 3727616 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3727778 | 3727803 | 3727778 | ID=MS.gene66989.t1.exon9;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3727778 | 3727803 | 3727778 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3727886 | 3727963 | 3727886 | ID=MS.gene66989.t1.exon10;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3727886 | 3727963 | 3727886 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3728100 | 3728180 | 3728100 | ID=MS.gene66989.t1.exon11;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3728100 | 3728180 | 3728100 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3728285 | 3728350 | 3728285 | ID=MS.gene66989.t1.exon12;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3728285 | 3728350 | 3728285 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| chr6.4 | exon | 3728649 | 3728822 | 3728649 | ID=MS.gene66989.t1.exon13;Parent=MS.gene66989.t1 |
| chr6.4 | CDS | 3728649 | 3728822 | 3728649 | ID=cds.MS.gene66989.t1;Parent=MS.gene66989.t1 |
| Gene Sequence |
| Protein sequence |
