Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67703.t1 | XP_003609029.1 | 87.2 | 392 | 50 | 0 | 1 | 392 | 1 | 392 | 1.10E-152 | 549.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67703.t1 | G7JQV9 | 87.2 | 392 | 50 | 0 | 1 | 392 | 1 | 392 | 8.1e-153 | 549.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene67703 | 0.84384 | 1.09E-58 | -1.69E-46 |
| MS.gene049989 | MS.gene67703 | 0.837777 | 4.25E-57 | -1.69E-46 |
| MS.gene050297 | MS.gene67703 | 0.875037 | 4.22E-68 | -1.69E-46 |
| MS.gene05124 | MS.gene67703 | 0.836401 | 9.56E-57 | -1.69E-46 |
| MS.gene051629 | MS.gene67703 | 0.813989 | 1.94E-51 | -1.69E-46 |
| MS.gene051955 | MS.gene67703 | 0.804891 | 1.74E-49 | -1.69E-46 |
| MS.gene052143 | MS.gene67703 | 0.815657 | 8.26E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene67703 | 0.84045 | 8.63E-58 | -1.69E-46 |
| MS.gene053173 | MS.gene67703 | 0.823416 | 1.40E-53 | -1.69E-46 |
| MS.gene053348 | MS.gene67703 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene053416 | MS.gene67703 | 0.825119 | 5.58E-54 | -1.69E-46 |
| MS.gene053417 | MS.gene67703 | 0.823143 | 1.62E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene67703 | 0.826249 | 3.01E-54 | -1.69E-46 |
| MS.gene054593 | MS.gene67703 | 0.81086 | 9.34E-51 | -1.69E-46 |
| MS.gene054643 | MS.gene67703 | 0.859911 | 2.98E-63 | -1.69E-46 |
| MS.gene055957 | MS.gene67703 | 0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene67703 | 0.839579 | 1.46E-57 | -1.69E-46 |
| MS.gene05640 | MS.gene67703 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene058853 | MS.gene67703 | 0.813423 | 2.58E-51 | -1.69E-46 |
| MS.gene059300 | MS.gene67703 | 0.835289 | 1.83E-56 | -1.69E-46 |
| MS.gene059553 | MS.gene67703 | 0.825456 | 4.64E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene67703 | 0.828394 | 9.21E-55 | -1.69E-46 |
| MS.gene060565 | MS.gene67703 | 0.832933 | 7.12E-56 | -1.69E-46 |
| MS.gene06057 | MS.gene67703 | 0.818826 | 1.60E-52 | -1.69E-46 |
| MS.gene061260 | MS.gene67703 | 0.848124 | 7.48E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67703.t1 | MTR_4g108100 | 93.112 | 392 | 27 | 0 | 1 | 392 | 1 | 392 | 0.0 | 701 |
| MS.gene67703.t1 | MTR_4g060050 | 49.180 | 61 | 31 | 0 | 130 | 190 | 142 | 202 | 5.87e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67703.t1 | AT5G62550 | 46.667 | 255 | 111 | 9 | 1 | 242 | 5 | 247 | 1.24e-44 | 161 |
Find 78 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCCTCTGTTGATGTTTC+TGG | 0.141767 | 8.4:+19021682 | MS.gene67703:CDS |
| TCAGCTCGTCTTGTAATTTC+TGG | 0.205275 | 8.4:-19023385 | None:intergenic |
| TTTCTTGACCCCACTCTTAT+TGG | 0.213637 | 8.4:-19023900 | None:intergenic |
| CTTGATCTTGTCTCAGAGAT+TGG | 0.260994 | 8.4:-19022851 | None:intergenic |
| AGTGGATATCTTTGAAGTTT+TGG | 0.266285 | 8.4:-19021820 | None:intergenic |
| GACGAACGAGTTTCCTCTTC+TGG | 0.269058 | 8.4:-19023536 | None:intergenic |
| TGCATCTGGCTTCTGTTCCT+TGG | 0.298826 | 8.4:-19021860 | None:intergenic |
| TTGATCTTGTCTCAGAGATT+GGG | 0.302498 | 8.4:-19022850 | None:intergenic |
| AAGAGTGGGGTCAAGAAATA+TGG | 0.315516 | 8.4:+19023905 | MS.gene67703:CDS |
| ACAGGATTAGAGAGCCTTCT+TGG | 0.325025 | 8.4:-19022782 | None:intergenic |
| GCAATTTCAAAATCTGCTTC+TGG | 0.340732 | 8.4:+19023821 | MS.gene67703:CDS |
| AGAGACCGGCGTTCGGGTTC+TGG | 0.355366 | 8.4:-19022903 | None:intergenic |
| GGCGACTCTATGGCTTTAAC+AGG | 0.355728 | 8.4:-19023653 | None:intergenic |
| AACCATAGAGTCACCCAAAA+AGG | 0.356976 | 8.4:+19023739 | MS.gene67703:CDS |
| AATCTCAGAGACCGGCGTTC+GGG | 0.362228 | 8.4:-19022909 | None:intergenic |
| AGCCATAGAGTCGCCCAAAA+AGG | 0.383256 | 8.4:+19023661 | MS.gene67703:CDS |
| AAATCTCAGAGACCGGCGTT+CGG | 0.394436 | 8.4:-19022910 | None:intergenic |
| GTTATGTTGCCAACCGCCTT+TGG | 0.396563 | 8.4:-19022827 | None:intergenic |
| TGAGAAGCATTGGTGCTAAC+AGG | 0.401430 | 8.4:-19021883 | None:intergenic |
| TTATTGGTTTCAAGCTTGCT+TGG | 0.407131 | 8.4:-19023884 | None:intergenic |
| TCTTGTCTTCAGCTTCATAT+TGG | 0.418460 | 8.4:+19022963 | MS.gene67703:CDS |
| GGGTTCTGGTTTGAGGCTCT+TGG | 0.425515 | 8.4:-19022889 | None:intergenic |
| AGGAGAAGTGACTTGAATAA+AGG | 0.430401 | 8.4:-19023711 | None:intergenic |
| TTGGTGCTAACAGGTGCATC+TGG | 0.433704 | 8.4:-19021874 | None:intergenic |
| GAGACAAGATCAAGGAGGTC+TGG | 0.434478 | 8.4:+19022860 | MS.gene67703:CDS |
| TGGATTCTTCAAACTAGCCT+TGG | 0.435742 | 8.4:+19023036 | MS.gene67703:CDS |
| TTGCCAACCGCCTTTGGACT+CGG | 0.440988 | 8.4:-19022821 | None:intergenic |
| GTAGGTGCCCTTGATTTCTC+TGG | 0.448973 | 8.4:+19022731 | MS.gene67703:CDS |
| GGCGTTCGGGTTCTGGTTTG+AGG | 0.450929 | 8.4:-19022896 | None:intergenic |
| TCAAAGATATCCACTGCGTT+CGG | 0.452607 | 8.4:+19021828 | MS.gene67703:CDS |
| TTTATTCAAGTCACTTCTCC+TGG | 0.454203 | 8.4:+19023713 | MS.gene67703:CDS |
| AGAGGCAGTGTTTAAGCACT+TGG | 0.461037 | 8.4:-19023615 | None:intergenic |
| CCTCTTAGATTGAGAAGCAT+TGG | 0.480180 | 8.4:-19021893 | None:intergenic |
| TTCAAACTAGCCTTGGAGGC+AGG | 0.481991 | 8.4:+19023043 | MS.gene67703:CDS |
| TGTCCTTGCCAGAGAAATCA+AGG | 0.493273 | 8.4:-19022739 | None:intergenic |
| GAGGCAGTGTTTAAGCACTT+GGG | 0.497338 | 8.4:-19023614 | None:intergenic |
| CTGGTAGTTTGAACCGTAGT+AGG | 0.501816 | 8.4:+19023840 | MS.gene67703:CDS |
| ATTCTTCAAACTAGCCTTGG+AGG | 0.505138 | 8.4:+19023039 | MS.gene67703:CDS |
| CCAATGCTTCTCAATCTAAG+AGG | 0.511758 | 8.4:+19021893 | MS.gene67703:CDS |
| CTCGTCTTGTAATTTCTGGA+AGG | 0.512731 | 8.4:-19023381 | None:intergenic |
| TGATCTTGTCTCAGAGATTG+GGG | 0.514449 | 8.4:-19022849 | None:intergenic |
| AATCAAGGGCACCTACACTT+TGG | 0.520785 | 8.4:-19022724 | None:intergenic |
| TGCCCTTGATTTCTCTGGCA+AGG | 0.521077 | 8.4:+19022736 | MS.gene67703:CDS |
| TACCTCACATCCTGCCTCCA+AGG | 0.524168 | 8.4:-19023053 | None:intergenic |
| TCGTCTTGTAATTTCTGGAA+GGG | 0.535594 | 8.4:-19023380 | None:intergenic |
| AGGAGAAATGACTTGAATAG+AGG | 0.536982 | 8.4:-19023633 | None:intergenic |
| GGAGTTGTAGATGATTTGAC+AGG | 0.537947 | 8.4:-19022800 | None:intergenic |
| ACTTCTTCTACCATGGCTAC+TGG | 0.540510 | 8.4:+19023581 | MS.gene67703:CDS |
| CTTCAGCACTTCTTCTACCA+TGG | 0.540835 | 8.4:+19023574 | MS.gene67703:CDS |
| ACCTACACTTTGGCTTACAT+TGG | 0.542241 | 8.4:-19022714 | None:intergenic |
| GAAAAGCACAACATTTCACT+TGG | 0.547280 | 8.4:+19023016 | MS.gene67703:CDS |
| AGCTTGAAACCAATAAGAGT+GGG | 0.548716 | 8.4:+19023891 | MS.gene67703:CDS |
| AGGCAGTGTTTAAGCACTTG+GGG | 0.559218 | 8.4:-19023613 | None:intergenic |
| TGGAGAACAAGTGAAAGTAC+TGG | 0.572339 | 8.4:+19023448 | MS.gene67703:CDS |
| GGATTAGAGAGCCTTCTTGG+TGG | 0.579620 | 8.4:-19022779 | None:intergenic |
| ACTCGTTCGTCTGATGATGA+AGG | 0.582042 | 8.4:+19023548 | MS.gene67703:CDS |
| TTCAATCAAATCATCATCAG+TGG | 0.585107 | 8.4:-19024202 | None:intergenic |
| AGGAAAGCTGATGCTAAAGA+AGG | 0.586233 | 8.4:+19023929 | MS.gene67703:CDS |
| CAATCTCTGAGACAAGATCA+AGG | 0.592779 | 8.4:+19022852 | MS.gene67703:CDS |
| GATCTGAAAATCTCAGAGAC+CGG | 0.593480 | 8.4:-19022917 | None:intergenic |
| TATTTCACAGATGCCAGAAG+AGG | 0.595376 | 8.4:+19023523 | MS.gene67703:CDS |
| AAGCTTGAAACCAATAAGAG+TGG | 0.600197 | 8.4:+19023890 | MS.gene67703:CDS |
| GGTCAGTTTACCAGTAGCCA+TGG | 0.603404 | 8.4:-19023591 | None:intergenic |
| ACTCCGAGTCCAAAGGCGGT+TGG | 0.613714 | 8.4:+19022818 | MS.gene67703:CDS |
| AGCCTTGGAGGCAGGATGTG+AGG | 0.616507 | 8.4:+19023051 | MS.gene67703:CDS |
| ATCTACAACTCCGAGTCCAA+AGG | 0.621399 | 8.4:+19022811 | MS.gene67703:CDS |
| CAAGTGCTAAACCACCAAGA+AGG | 0.625854 | 8.4:+19022768 | MS.gene67703:CDS |
| GATCTAGAAGCCGAACGCAG+TGG | 0.627660 | 8.4:-19021838 | None:intergenic |
| GCGTTCGGCTTCTAGATCCA+AGG | 0.635836 | 8.4:+19021843 | MS.gene67703:CDS |
| GTGGGGTCAAGAAATATGGA+AGG | 0.640207 | 8.4:+19023909 | MS.gene67703:CDS |
| TCAAACCAGAACCCGAACGC+CGG | 0.647853 | 8.4:+19022898 | MS.gene67703:CDS |
| GGCAGTGTTTAAGCACTTGG+GGG | 0.661328 | 8.4:-19023612 | None:intergenic |
| TACAACTCCGAGTCCAAAGG+CGG | 0.670021 | 8.4:+19022814 | MS.gene67703:CDS |
| GTCCTTGCCAGAGAAATCAA+GGG | 0.679822 | 8.4:-19022738 | None:intergenic |
| GCCAATGTAAGCCAAAGTGT+AGG | 0.695393 | 8.4:+19022713 | MS.gene67703:CDS |
| AATACCAGAAACATCAACAG+AGG | 0.698470 | 8.4:-19021686 | None:intergenic |
| GCTTGAAACCAATAAGAGTG+GGG | 0.706638 | 8.4:+19023892 | MS.gene67703:CDS |
| TCTCTGAGACAAGATCAAGG+AGG | 0.818846 | 8.4:+19022855 | MS.gene67703:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATCAATTAATTGAAAA+AGG | - | chr8.4:19021730-19021749 | None:intergenic | 15.0% |
| !!! | TATTGTGATTTTTTATATTG+TGG | + | chr8.4:19023173-19023192 | MS.gene67703:intron | 15.0% |
| !!! | TCAATTTTCATATATAACTA+AGG | - | chr8.4:19022593-19022612 | None:intergenic | 15.0% |
| !! | AAAAAGAAAATATGGTAAAG+TGG | + | chr8.4:19024075-19024094 | MS.gene67703:intron | 20.0% |
| !! | AATCTAAAAATAAGAGCTTT+AGG | + | chr8.4:19022307-19022326 | MS.gene67703:intron | 20.0% |
| !! | ATGACAAAATTGAAATAAAC+AGG | - | chr8.4:19023102-19023121 | None:intergenic | 20.0% |
| !! | TGAAGTTAATTTCAAAACAT+TGG | + | chr8.4:19022039-19022058 | MS.gene67703:intron | 20.0% |
| !! | TTATTATGTTGAAAATCGAA+GGG | - | chr8.4:19022116-19022135 | None:intergenic | 20.0% |
| !! | TTCATATATAACTAAGGTTA+TGG | - | chr8.4:19022587-19022606 | None:intergenic | 20.0% |
| !! | TTTATTATGTTGAAAATCGA+AGG | - | chr8.4:19022117-19022136 | None:intergenic | 20.0% |
| !!! | AAATTGAGTGAATACTTTTT+AGG | + | chr8.4:19022606-19022625 | MS.gene67703:intron | 20.0% |
| !!! | AATCTAATTTACATTTTCAG+AGG | + | chr8.4:19022680-19022699 | MS.gene67703:intron | 20.0% |
| !!! | AATTTTAAAACTTGCTAAGT+AGG | - | chr8.4:19023146-19023165 | None:intergenic | 20.0% |
| !!! | TAGAGAATTATAGTTTTGTT+TGG | + | chr8.4:19021962-19021981 | MS.gene67703:intron | 20.0% |
| ! | ACCAACATGTATACATATAT+TGG | + | chr8.4:19022398-19022417 | MS.gene67703:intron | 25.0% |
| ! | AGAATATATGTCTGATATGT+TGG | + | chr8.4:19024156-19024175 | MS.gene67703:intron | 25.0% |
| ! | ATAAACAGGAATGAATTGAT+TGG | - | chr8.4:19023088-19023107 | None:intergenic | 25.0% |
| ! | ATTCCTTAACATGTATCTTT+AGG | - | chr8.4:19022290-19022309 | None:intergenic | 25.0% |
| ! | GTGTATAATGTAATTAACGT+TGG | - | chr8.4:19022089-19022108 | None:intergenic | 25.0% |
| ! | GTTCACATTAAACAAACTAA+AGG | - | chr8.4:19022430-19022449 | None:intergenic | 25.0% |
| ! | TGCAATCAAAGTTTATCAAT+TGG | - | chr8.4:19023215-19023234 | None:intergenic | 25.0% |
| ! | TGCTGAAGAAAAAGAAAATA+TGG | + | chr8.4:19024067-19024086 | MS.gene67703:CDS | 25.0% |
| !!! | ACTGTTTTTTTTTTCCTTTC+AGG | + | chr8.4:19021778-19021797 | MS.gene67703:intron | 25.0% |
| !!! | CTGTTTTTTTTTTCCTTTCA+GGG | + | chr8.4:19021779-19021798 | MS.gene67703:intron | 25.0% |
| !!! | TAATCAAGTCGTCTTTTTTA+TGG | + | chr8.4:19023334-19023353 | MS.gene67703:intron | 25.0% |
| !!! | TTTTGGCTAATTTCCTTTTT+GGG | - | chr8.4:19023677-19023696 | None:intergenic | 25.0% |
| AAATCACATTTATACATGCG+TGG | + | chr8.4:19023260-19023279 | MS.gene67703:intron | 30.0% | |
| AACTGAAAATTCATGCAAGA+AGG | + | chr8.4:19022152-19022171 | MS.gene67703:intron | 30.0% | |
| ACAAAGACTTATCGATCTTA+AGG | - | chr8.4:19022492-19022511 | None:intergenic | 30.0% | |
| ACTAGCCAAAAGAAAAATCT+TGG | + | chr8.4:19023764-19023783 | MS.gene67703:CDS | 30.0% | |
| ACTCAGATTGTTTGAATTTG+TGG | + | chr8.4:19022001-19022020 | MS.gene67703:intron | 30.0% | |
| CAACAAAAACTTACTGAACT+TGG | + | chr8.4:19023428-19023447 | MS.gene67703:CDS | 30.0% | |
| CTCAGATTGTTTGAATTTGT+GGG | + | chr8.4:19022002-19022021 | MS.gene67703:intron | 30.0% | |
| GCCAATATATGTATACATGT+TGG | - | chr8.4:19022402-19022421 | None:intergenic | 30.0% | |
| TAAGTCTTGCATAATGCAAA+TGG | - | chr8.4:19022551-19022570 | None:intergenic | 30.0% | |
| TCAGATTGTTTGAATTTGTG+GGG | + | chr8.4:19022003-19022022 | MS.gene67703:intron | 30.0% | |
| TCATGCAAGAAGGATAATAT+TGG | + | chr8.4:19022162-19022181 | MS.gene67703:intron | 30.0% | |
| TGTACTCTACTTCAATTCAA+GGG | - | chr8.4:19022651-19022670 | None:intergenic | 30.0% | |
| TTCAATCAAATCATCATCAG+TGG | - | chr8.4:19024205-19024224 | None:intergenic | 30.0% | |
| TTGTACTCTACTTCAATTCA+AGG | - | chr8.4:19022652-19022671 | None:intergenic | 30.0% | |
| ! | CAAGTTCAGTAAGTTTTTGT+TGG | - | chr8.4:19023430-19023449 | None:intergenic | 30.0% |
| ! | TGGTTCCAAGATTTTTCTTT+TGG | - | chr8.4:19023772-19023791 | None:intergenic | 30.0% |
| ! | TTGTCTAAAATCTAATGCCT+TGG | + | chr8.4:19023995-19024014 | MS.gene67703:intron | 30.0% |
| ! | TTTTCTTCAGCACTTGTAAT+AGG | - | chr8.4:19024059-19024078 | None:intergenic | 30.0% |
| !! | ACTTTTTAACTGACCTACTA+CGG | - | chr8.4:19023856-19023875 | None:intergenic | 30.0% |
| !! | CTTTTGGCTAATTTCCTTTT+TGG | - | chr8.4:19023678-19023697 | None:intergenic | 30.0% |
| !!! | AGTGGATATCTTTGAAGTTT+TGG | - | chr8.4:19021823-19021842 | None:intergenic | 30.0% |
| !!! | ATATGTTGGTTTTGTCTTGT+AGG | + | chr8.4:19024170-19024189 | MS.gene67703:intron | 30.0% |
| !!! | TTTTGGCTAGTTTCCTTTTT+GGG | - | chr8.4:19023755-19023774 | None:intergenic | 30.0% |
| AAGCTTGAAACCAATAAGAG+TGG | + | chr8.4:19023890-19023909 | MS.gene67703:CDS | 35.0% | |
| AATACCAGAAACATCAACAG+AGG | - | chr8.4:19021689-19021708 | None:intergenic | 35.0% | |
| AGCAAAAAGTAACAACACCA+AGG | - | chr8.4:19024015-19024034 | None:intergenic | 35.0% | |
| AGCTTGAAACCAATAAGAGT+GGG | + | chr8.4:19023891-19023910 | MS.gene67703:CDS | 35.0% | |
| AGGAGAAATGACTTGAATAG+AGG | - | chr8.4:19023636-19023655 | None:intergenic | 35.0% | |
| AGGAGAAGTGACTTGAATAA+AGG | - | chr8.4:19023714-19023733 | None:intergenic | 35.0% | |
| GCAATTTCAAAATCTGCTTC+TGG | + | chr8.4:19023821-19023840 | MS.gene67703:CDS | 35.0% | |
| GTGCCTAAAGATACATGTTA+AGG | + | chr8.4:19022284-19022303 | MS.gene67703:intron | 35.0% | |
| TCTTGTCTTCAGCTTCATAT+TGG | + | chr8.4:19022963-19022982 | MS.gene67703:CDS | 35.0% | |
| TTGATCTTGTCTCAGAGATT+GGG | - | chr8.4:19022853-19022872 | None:intergenic | 35.0% | |
| TTTATTCAAGTCACTTCTCC+TGG | + | chr8.4:19023713-19023732 | MS.gene67703:CDS | 35.0% | |
| ! | AAGACGACTTGATTAGTTCA+TGG | - | chr8.4:19023329-19023348 | None:intergenic | 35.0% |
| ! | AGACGACTTGATTAGTTCAT+GGG | - | chr8.4:19023328-19023347 | None:intergenic | 35.0% |
| ! | AGGCAGTGAGATTTTTCTTT+TGG | - | chr8.4:19023694-19023713 | None:intergenic | 35.0% |
| ! | CAGTAAGTTTTTGTTGGTGT+CGG | - | chr8.4:19023424-19023443 | None:intergenic | 35.0% |
| ! | CATTTTCAGAGAGCTTGATT+TGG | - | chr8.4:19022994-19023013 | None:intergenic | 35.0% |
| ! | GAAAAGCACAACATTTCACT+TGG | + | chr8.4:19023016-19023035 | MS.gene67703:CDS | 35.0% |
| ! | GTTTTGTCTTGTAGGATGTT+CGG | + | chr8.4:19024178-19024197 | MS.gene67703:intron | 35.0% |
| ! | TCGTCTTGTAATTTCTGGAA+GGG | - | chr8.4:19023383-19023402 | None:intergenic | 35.0% |
| !! | TCTGAGATTTTCTCTCAACT+TGG | - | chr8.4:19023792-19023811 | None:intergenic | 35.0% |
| !! | TTATTGGTTTCAAGCTTGCT+TGG | - | chr8.4:19023887-19023906 | None:intergenic | 35.0% |
| !!! | CTTTTGGCTAGTTTCCTTTT+TGG | - | chr8.4:19023756-19023775 | None:intergenic | 35.0% |
| AACCATAGAGTCACCCAAAA+AGG | + | chr8.4:19023739-19023758 | MS.gene67703:CDS | 40.0% | |
| AAGAGTGGGGTCAAGAAATA+TGG | + | chr8.4:19023905-19023924 | MS.gene67703:CDS | 40.0% | |
| AGGAAAGCTGATGCTAAAGA+AGG | + | chr8.4:19023929-19023948 | MS.gene67703:CDS | 40.0% | |
| CAATCCTCTGTTGATGTTTC+TGG | + | chr8.4:19021682-19021701 | MS.gene67703:CDS | 40.0% | |
| CCAATGCTTCTCAATCTAAG+AGG | + | chr8.4:19021893-19021912 | MS.gene67703:CDS | 40.0% | |
| CTTGATCTTGTCTCAGAGAT+TGG | - | chr8.4:19022854-19022873 | None:intergenic | 40.0% | |
| GATCTGAAAATCTCAGAGAC+CGG | - | chr8.4:19022920-19022939 | None:intergenic | 40.0% | |
| GCTTGAAACCAATAAGAGTG+GGG | + | chr8.4:19023892-19023911 | MS.gene67703:CDS | 40.0% | |
| GGAGTTGTAGATGATTTGAC+AGG | - | chr8.4:19022803-19022822 | None:intergenic | 40.0% | |
| TATTTCACAGATGCCAGAAG+AGG | + | chr8.4:19023523-19023542 | MS.gene67703:CDS | 40.0% | |
| TCAAAGATATCCACTGCGTT+CGG | + | chr8.4:19021828-19021847 | MS.gene67703:CDS | 40.0% | |
| TCAGCTCGTCTTGTAATTTC+TGG | - | chr8.4:19023388-19023407 | None:intergenic | 40.0% | |
| TGATCTTGTCTCAGAGATTG+GGG | - | chr8.4:19022852-19022871 | None:intergenic | 40.0% | |
| TGCAATCGCATCATGATCTT+TGG | + | chr8.4:19023231-19023250 | MS.gene67703:intron | 40.0% | |
| TTTCTTGACCCCACTCTTAT+TGG | - | chr8.4:19023903-19023922 | None:intergenic | 40.0% | |
| ! | ACCTACACTTTGGCTTACAT+TGG | - | chr8.4:19022717-19022736 | None:intergenic | 40.0% |
| ! | CCTCTTAGATTGAGAAGCAT+TGG | - | chr8.4:19021896-19021915 | None:intergenic | 40.0% |
| ! | CTCGTCTTGTAATTTCTGGA+AGG | - | chr8.4:19023384-19023403 | None:intergenic | 40.0% |
| ! | TGGAGAACAAGTGAAAGTAC+TGG | + | chr8.4:19023448-19023467 | MS.gene67703:CDS | 40.0% |
| ! | TGGATTCTTCAAACTAGCCT+TGG | + | chr8.4:19023036-19023055 | MS.gene67703:CDS | 40.0% |
| !! | ATTCTTCAAACTAGCCTTGG+AGG | + | chr8.4:19023039-19023058 | MS.gene67703:CDS | 40.0% |
| !! | CAATCTCTGAGACAAGATCA+AGG | + | chr8.4:19022852-19022871 | MS.gene67703:CDS | 40.0% |
| !!! | TTCCTTTTTGGGTGACTCTA+TGG | - | chr8.4:19023744-19023763 | None:intergenic | 40.0% |
| ACAGGATTAGAGAGCCTTCT+TGG | - | chr8.4:19022785-19022804 | None:intergenic | 45.0% | |
| ACTTCTTCTACCATGGCTAC+TGG | + | chr8.4:19023581-19023600 | MS.gene67703:CDS | 45.0% | |
| AGAGGCAGTGTTTAAGCACT+TGG | - | chr8.4:19023618-19023637 | None:intergenic | 45.0% | |
| AGGCAGTGTTTAAGCACTTG+GGG | - | chr8.4:19023616-19023635 | None:intergenic | 45.0% | |
| ATCTACAACTCCGAGTCCAA+AGG | + | chr8.4:19022811-19022830 | MS.gene67703:CDS | 45.0% | |
| CAAGTGCTAAACCACCAAGA+AGG | + | chr8.4:19022768-19022787 | MS.gene67703:CDS | 45.0% | |
| CTGGTAGTTTGAACCGTAGT+AGG | + | chr8.4:19023840-19023859 | MS.gene67703:CDS | 45.0% | |
| CTTCAGCACTTCTTCTACCA+TGG | + | chr8.4:19023574-19023593 | MS.gene67703:CDS | 45.0% | |
| GAGGCAGTGTTTAAGCACTT+GGG | - | chr8.4:19023617-19023636 | None:intergenic | 45.0% | |
| GCCAATGTAAGCCAAAGTGT+AGG | + | chr8.4:19022713-19022732 | MS.gene67703:CDS | 45.0% | |
| GTCCTTGCCAGAGAAATCAA+GGG | - | chr8.4:19022741-19022760 | None:intergenic | 45.0% | |
| GTGGGGTCAAGAAATATGGA+AGG | + | chr8.4:19023909-19023928 | MS.gene67703:CDS | 45.0% | |
| TGTCCTTGCCAGAGAAATCA+AGG | - | chr8.4:19022742-19022761 | None:intergenic | 45.0% | |
| ! | ACTCGTTCGTCTGATGATGA+AGG | + | chr8.4:19023548-19023567 | MS.gene67703:CDS | 45.0% |
| !! | AATCAAGGGCACCTACACTT+TGG | - | chr8.4:19022727-19022746 | None:intergenic | 45.0% |
| !! | GGTGACTCTATGGTTTTACC+AGG | - | chr8.4:19023734-19023753 | None:intergenic | 45.0% |
| !! | TCTCTGAGACAAGATCAAGG+AGG | + | chr8.4:19022855-19022874 | MS.gene67703:CDS | 45.0% |
| !! | TGAGAAGCATTGGTGCTAAC+AGG | - | chr8.4:19021886-19021905 | None:intergenic | 45.0% |
| !! | TTCCTTTTTGGGCGACTCTA+TGG | - | chr8.4:19023666-19023685 | None:intergenic | 45.0% |
| AAATCTCAGAGACCGGCGTT+CGG | - | chr8.4:19022913-19022932 | None:intergenic | 50.0% | |
| AGCCATAGAGTCGCCCAAAA+AGG | + | chr8.4:19023661-19023680 | MS.gene67703:CDS | 50.0% | |
| CAGAAGCAGAGTTCCCTGAA+AGG | - | chr8.4:19021795-19021814 | None:intergenic | 50.0% | |
| GACGAACGAGTTTCCTCTTC+TGG | - | chr8.4:19023539-19023558 | None:intergenic | 50.0% | |
| GAGACAAGATCAAGGAGGTC+TGG | + | chr8.4:19022860-19022879 | MS.gene67703:CDS | 50.0% | |
| GGATTAGAGAGCCTTCTTGG+TGG | - | chr8.4:19022782-19022801 | None:intergenic | 50.0% | |
| GGCAGTGTTTAAGCACTTGG+GGG | - | chr8.4:19023615-19023634 | None:intergenic | 50.0% | |
| GGTCAGTTTACCAGTAGCCA+TGG | - | chr8.4:19023594-19023613 | None:intergenic | 50.0% | |
| GTAGGTGCCCTTGATTTCTC+TGG | + | chr8.4:19022731-19022750 | MS.gene67703:CDS | 50.0% | |
| GTTATGTTGCCAACCGCCTT+TGG | - | chr8.4:19022830-19022849 | None:intergenic | 50.0% | |
| TACAACTCCGAGTCCAAAGG+CGG | + | chr8.4:19022814-19022833 | MS.gene67703:CDS | 50.0% | |
| TGCCCTTGATTTCTCTGGCA+AGG | + | chr8.4:19022736-19022755 | MS.gene67703:CDS | 50.0% | |
| ! | TGCATCTGGCTTCTGTTCCT+TGG | - | chr8.4:19021863-19021882 | None:intergenic | 50.0% |
| !! | GGCGACTCTATGGCTTTAAC+AGG | - | chr8.4:19023656-19023675 | None:intergenic | 50.0% |
| !! | TTCAAACTAGCCTTGGAGGC+AGG | + | chr8.4:19023043-19023062 | MS.gene67703:CDS | 50.0% |
| !! | TTGGTGCTAACAGGTGCATC+TGG | - | chr8.4:19021877-19021896 | None:intergenic | 50.0% |
| AATCTCAGAGACCGGCGTTC+GGG | - | chr8.4:19022912-19022931 | None:intergenic | 55.0% | |
| GATCTAGAAGCCGAACGCAG+TGG | - | chr8.4:19021841-19021860 | None:intergenic | 55.0% | |
| GCGTTCGGCTTCTAGATCCA+AGG | + | chr8.4:19021843-19021862 | MS.gene67703:CDS | 55.0% | |
| TACCTCACATCCTGCCTCCA+AGG | - | chr8.4:19023056-19023075 | None:intergenic | 55.0% | |
| TCAAACCAGAACCCGAACGC+CGG | + | chr8.4:19022898-19022917 | MS.gene67703:CDS | 55.0% | |
| TGTAGTCTAGCCCGCAACCA+CGG | - | chr8.4:19023292-19023311 | None:intergenic | 55.0% | |
| TTGCCAACCGCCTTTGGACT+CGG | - | chr8.4:19022824-19022843 | None:intergenic | 55.0% | |
| !! | GGGTTCTGGTTTGAGGCTCT+TGG | - | chr8.4:19022892-19022911 | None:intergenic | 55.0% |
| ACTCCGAGTCCAAAGGCGGT+TGG | + | chr8.4:19022818-19022837 | MS.gene67703:CDS | 60.0% | |
| AGCCTTGGAGGCAGGATGTG+AGG | + | chr8.4:19023051-19023070 | MS.gene67703:CDS | 60.0% | |
| TACATGCGTGGCCTCAACCG+TGG | + | chr8.4:19023272-19023291 | MS.gene67703:intron | 60.0% | |
| !! | GGCGTTCGGGTTCTGGTTTG+AGG | - | chr8.4:19022899-19022918 | None:intergenic | 60.0% |
| CGTGGCCTCAACCGTGGTTG+CGG | + | chr8.4:19023278-19023297 | MS.gene67703:intron | 65.0% | |
| CTAGCCCGCAACCACGGTTG+AGG | - | chr8.4:19023286-19023305 | None:intergenic | 65.0% | |
| GTGGCCTCAACCGTGGTTGC+GGG | + | chr8.4:19023279-19023298 | MS.gene67703:intron | 65.0% | |
| ! | AGAGACCGGCGTTCGGGTTC+TGG | - | chr8.4:19022906-19022925 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 19021670 | 19024233 | 19021670 | ID=MS.gene67703 |
| chr8.4 | mRNA | 19021670 | 19024233 | 19021670 | ID=MS.gene67703.t1;Parent=MS.gene67703 |
| chr8.4 | exon | 19021670 | 19021703 | 19021670 | ID=MS.gene67703.t1.exon1;Parent=MS.gene67703.t1 |
| chr8.4 | CDS | 19021670 | 19021703 | 19021670 | ID=cds.MS.gene67703.t1;Parent=MS.gene67703.t1 |
| chr8.4 | exon | 19021800 | 19021914 | 19021800 | ID=MS.gene67703.t1.exon2;Parent=MS.gene67703.t1 |
| chr8.4 | CDS | 19021800 | 19021914 | 19021800 | ID=cds.MS.gene67703.t1;Parent=MS.gene67703.t1 |
| chr8.4 | exon | 19022700 | 19023072 | 19022700 | ID=MS.gene67703.t1.exon3;Parent=MS.gene67703.t1 |
| chr8.4 | CDS | 19022700 | 19023072 | 19022700 | ID=cds.MS.gene67703.t1;Parent=MS.gene67703.t1 |
| chr8.4 | exon | 19023380 | 19023950 | 19023380 | ID=MS.gene67703.t1.exon4;Parent=MS.gene67703.t1 |
| chr8.4 | CDS | 19023380 | 19023950 | 19023380 | ID=cds.MS.gene67703.t1;Parent=MS.gene67703.t1 |
| chr8.4 | exon | 19024045 | 19024088 | 19024045 | ID=MS.gene67703.t1.exon5;Parent=MS.gene67703.t1 |
| chr8.4 | CDS | 19024045 | 19024088 | 19024045 | ID=cds.MS.gene67703.t1;Parent=MS.gene67703.t1 |
| chr8.4 | exon | 19024192 | 19024233 | 19024192 | ID=MS.gene67703.t1.exon6;Parent=MS.gene67703.t1 |
| chr8.4 | CDS | 19024192 | 19024233 | 19024192 | ID=cds.MS.gene67703.t1;Parent=MS.gene67703.t1 |
| Gene Sequence |
| Protein sequence |
