Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69102.t1 | XP_003602096.2 | 81.6 | 38 | 7 | 0 | 84 | 121 | 59 | 96 | 7.60E-07 | 63.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69102.t1 | G7J5J3 | 81.6 | 38 | 7 | 0 | 84 | 121 | 59 | 96 | 5.5e-07 | 63.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049531 | MS.gene69102 | 0.813267 | 2.79E-51 | -1.69E-46 |
| MS.gene049853 | MS.gene69102 | 0.815437 | 9.25E-52 | -1.69E-46 |
| MS.gene052447 | MS.gene69102 | 0.829965 | 3.83E-55 | -1.69E-46 |
| MS.gene054484 | MS.gene69102 | 0.80751 | 4.88E-50 | -1.69E-46 |
| MS.gene055017 | MS.gene69102 | 0.824936 | 6.16E-54 | -1.69E-46 |
| MS.gene055056 | MS.gene69102 | 0.813453 | 2.54E-51 | -1.69E-46 |
| MS.gene055058 | MS.gene69102 | 0.804714 | 1.89E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene69102 | 0.801544 | 8.56E-49 | -1.69E-46 |
| MS.gene058294 | MS.gene69102 | 0.807065 | 6.06E-50 | -1.69E-46 |
| MS.gene058515 | MS.gene69102 | 0.829624 | 4.64E-55 | -1.69E-46 |
| MS.gene059276 | MS.gene69102 | 0.830622 | 2.65E-55 | -1.69E-46 |
| MS.gene059458 | MS.gene69102 | 0.81362 | 2.33E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69102.t1 | MTR_3g089100 | 88.542 | 96 | 10 | 1 | 27 | 121 | 1 | 96 | 7.16e-31 | 115 |
| MS.gene69102.t1 | MTR_3g089100 | 88.542 | 96 | 10 | 1 | 27 | 121 | 1 | 96 | 7.45e-31 | 115 |
| MS.gene69102.t1 | MTR_3g089100 | 88.542 | 96 | 10 | 1 | 27 | 121 | 1 | 96 | 7.90e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 37 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCATAACTTCTTCTTCTT+TGG | 0.231300 | 3.4:+96158860 | None:intergenic |
| TTACCGGAGTTGTTGTTGTT+GGG | 0.351319 | 3.4:+96158807 | None:intergenic |
| ATTCTTTCTCAGCCTGATAA+TGG | 0.358493 | 3.4:-96158650 | MS.gene69102:intron |
| TTTACCGGAGTTGTTGTTGT+TGG | 0.379968 | 3.4:+96158806 | None:intergenic |
| AGAAGATGAAGGTCGTTTAC+CGG | 0.381174 | 3.4:+96158791 | None:intergenic |
| GATGAAGCAACACCATTATC+AGG | 0.391396 | 3.4:+96158638 | None:intergenic |
| GGTTCATCGATCTGAGCATT+AGG | 0.402190 | 3.4:+96158554 | None:intergenic |
| CGTTTAGATGAAGGAGAAGA+AGG | 0.430320 | 3.4:+96158753 | None:intergenic |
| GGGAGTTGCCAGTACCAAAC+GGG | 0.430499 | 3.4:-96159535 | MS.gene69102:CDS |
| GCAATCGCGGGAGTTGCATC+AGG | 0.442296 | 3.4:+96158506 | None:intergenic |
| TCCTTCATCTAAACGCCAAA+AGG | 0.452837 | 3.4:-96158745 | MS.gene69102:intron |
| TGAAAGGAGGGTACCCCGTT+TGG | 0.464198 | 3.4:+96159521 | None:intergenic |
| GAGGGTACCCCGTTTGGTAC+TGG | 0.472129 | 3.4:+96159527 | None:intergenic |
| AGCCAAAGAAGAAGAAGTTA+TGG | 0.472596 | 3.4:-96158862 | MS.gene69102:CDS |
| CAAGAACCGTCTGTCGATCC+CGG | 0.476593 | 3.4:-96158590 | MS.gene69102:CDS |
| GGTTCTTGATTTGAATTCTC+CGG | 0.481752 | 3.4:+96158605 | None:intergenic |
| TCATCATTAGCAGCTGCTAC+AGG | 0.486403 | 3.4:+96158533 | None:intergenic |
| TGATAATGGTGTTGCTTCAT+CGG | 0.488569 | 3.4:-96158636 | MS.gene69102:CDS |
| TACCGGAGTTGTTGTTGTTG+GGG | 0.505915 | 3.4:+96158808 | None:intergenic |
| AAGTCTCTAATCTCACTGAC+CGG | 0.529132 | 3.4:-96159557 | MS.gene69102:CDS |
| GGGGAGTTGCCAGTACCAAA+CGG | 0.539647 | 3.4:-96159536 | MS.gene69102:CDS |
| TAACGAACCATCAGCAATCG+CGG | 0.554972 | 3.4:+96158493 | None:intergenic |
| TTAGATGAAGGAGAAGAAGG+AGG | 0.556358 | 3.4:+96158756 | None:intergenic |
| GCAACTCCCGCGATTGCTGA+TGG | 0.562807 | 3.4:-96158500 | MS.gene69102:CDS |
| GTTTGGTACTGGCAACTCCC+CGG | 0.566151 | 3.4:+96159538 | None:intergenic |
| AGTCTCTAATCTCACTGACC+GGG | 0.584559 | 3.4:-96159556 | MS.gene69102:CDS |
| AACGAACCATCAGCAATCGC+GGG | 0.588091 | 3.4:+96158494 | None:intergenic |
| TGCTTCATCGGAGAAACCAC+CGG | 0.588528 | 3.4:-96158624 | MS.gene69102:CDS |
| AGAAGAAGGAGGTTTGTCAT+CGG | 0.590143 | 3.4:+96158767 | None:intergenic |
| TTGTCATCGGAAGAAGATGA+AGG | 0.614507 | 3.4:+96158780 | None:intergenic |
| TTCCCCAACAACAACAACTC+CGG | 0.615482 | 3.4:-96158810 | MS.gene69102:CDS |
| TCTTGATTTGAATTCTCCGG+TGG | 0.625267 | 3.4:+96158608 | None:intergenic |
| TCAACGAGACACAACAGTGG+TGG | 0.655270 | 3.4:-96158837 | MS.gene69102:CDS |
| AAGACCCATCTCATGCACAA+AGG | 0.676403 | 3.4:-96159585 | None:intergenic |
| GTCTCTAATCTCACTGACCG+GGG | 0.681160 | 3.4:-96159555 | MS.gene69102:CDS |
| GGAGTTGCCAGTACCAAACG+GGG | 0.712771 | 3.4:-96159534 | MS.gene69102:intron |
| GTTTCAACGAGACACAACAG+TGG | 0.761613 | 3.4:-96158840 | MS.gene69102:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTATTTAAATTAGTT+AGG | + | chr3.4:96158891-96158910 | None:intergenic | 10.0% |
| !!! | TTTTGTATTTAAATTAGTTA+GGG | + | chr3.4:96158890-96158909 | None:intergenic | 10.0% |
| !! | AGGAAGAAATTAAAAAAAAA+TGG | - | chr3.4:96159069-96159088 | MS.gene69102:intron | 15.0% |
| !! | CCAATATATAATAAATAGAA+AGG | + | chr3.4:96158817-96158836 | None:intergenic | 15.0% |
| !! | CCTTTCTATTTATTATATAT+TGG | - | chr3.4:96158814-96158833 | MS.gene69102:CDS | 15.0% |
| !! | TTGGAGAAATTAAAAAAAAA+AGG | - | chr3.4:96159049-96159068 | MS.gene69102:intron | 15.0% |
| !! | TTTGTATTTAAATTAGTTAG+GGG | + | chr3.4:96158889-96158908 | None:intergenic | 15.0% |
| !! | AATGGAAAAAGAAAATTGAA+AGG | - | chr3.4:96159087-96159106 | MS.gene69102:intron | 20.0% |
| !! | TTGTATTTAAATTAGTTAGG+GGG | + | chr3.4:96158888-96158907 | None:intergenic | 20.0% |
| ! | GAAAAGTTAATTCTTCTCAA+AGG | + | chr3.4:96158628-96158647 | None:intergenic | 25.0% |
| !! | CTTTAAAAAAAATATCCACG+TGG | + | chr3.4:96159011-96159030 | None:intergenic | 25.0% |
| !!! | GCTTGTTGATATTTTGAAAT+TGG | - | chr3.4:96159030-96159049 | MS.gene69102:intron | 25.0% |
| AACCATAACTTCTTCTTCTT+TGG | + | chr3.4:96159206-96159225 | None:intergenic | 30.0% | |
| AAGAGAAATGAAGAAAAGAG+TGG | + | chr3.4:96159150-96159169 | None:intergenic | 30.0% | |
| GAAAAAGAAAATTGAAAGGC+AGG | - | chr3.4:96159091-96159110 | MS.gene69102:intron | 30.0% | |
| TGCCAAAGAATCAATACTTA+GGG | + | chr3.4:96158918-96158937 | None:intergenic | 30.0% | |
| ! | AAAGAGAGAAAAAAGCGTAA+CGG | + | chr3.4:96159356-96159375 | None:intergenic | 30.0% |
| ! | CTCTAACTTTTCAAAAGTTG+CGG | - | chr3.4:96158856-96158875 | MS.gene69102:CDS | 30.0% |
| !! | GCAACTTTTGAAAAGTTAGA+GGG | + | chr3.4:96158857-96158876 | None:intergenic | 30.0% |
| !!! | TATTGATTCTTTGGCAGTTT+TGG | - | chr3.4:96158922-96158941 | MS.gene69102:intron | 30.0% |
| !!! | TATTGGCTTAATTGCACTTT+TGG | - | chr3.4:96158831-96158850 | MS.gene69102:CDS | 30.0% |
| AATGAAGAAAAGAGTGGAGA+AGG | + | chr3.4:96159144-96159163 | None:intergenic | 35.0% | |
| AGCCAAAGAAGAAGAAGTTA+TGG | - | chr3.4:96159201-96159220 | MS.gene69102:intron | 35.0% | |
| ATCAGAGACCAAGTCAAAAA+TGG | + | chr3.4:96158957-96158976 | None:intergenic | 35.0% | |
| ATTCTTTCTCAGCCTGATAA+TGG | - | chr3.4:96159413-96159432 | MS.gene69102:intron | 35.0% | |
| CCAAAGAATCAATACTTAGG+GGG | + | chr3.4:96158916-96158935 | None:intergenic | 35.0% | |
| CTGCCAAAGAATCAATACTT+AGG | + | chr3.4:96158919-96158938 | None:intergenic | 35.0% | |
| GCCAAAGAATCAATACTTAG+GGG | + | chr3.4:96158917-96158936 | None:intergenic | 35.0% | |
| ! | ATTCTTCTCAAAGGCTCTTT+TGG | + | chr3.4:96158619-96158638 | None:intergenic | 35.0% |
| ! | CTTTTCAAAAGTTGCGGTTA+TGG | - | chr3.4:96158862-96158881 | MS.gene69102:CDS | 35.0% |
| ! | GGTTCTTGATTTGAATTCTC+CGG | + | chr3.4:96159461-96159480 | None:intergenic | 35.0% |
| !! | CGCAACTTTTGAAAAGTTAG+AGG | + | chr3.4:96158858-96158877 | None:intergenic | 35.0% |
| !! | TGATAATGGTGTTGCTTCAT+CGG | - | chr3.4:96159427-96159446 | MS.gene69102:intron | 35.0% |
| !!! | ATTAGGTTGAGCACATTTTC+CGG | + | chr3.4:96159495-96159514 | None:intergenic | 35.0% |
| AAAGAGTGGAGAAGGAACAA+TGG | + | chr3.4:96159136-96159155 | None:intergenic | 40.0% | |
| AAGTCTCTAATCTCACTGAC+CGG | - | chr3.4:96158506-96158525 | MS.gene69102:CDS | 40.0% | |
| ACCAAGTCAAAAATGGACCA+GGG | + | chr3.4:96158950-96158969 | None:intergenic | 40.0% | |
| AGAAGAAGGAGGTTTGTCAT+CGG | + | chr3.4:96159299-96159318 | None:intergenic | 40.0% | |
| AGAAGATGAAGGTCGTTTAC+CGG | + | chr3.4:96159275-96159294 | None:intergenic | 40.0% | |
| ATGATCTCAAATGCTCTCTG+GGG | + | chr3.4:96158757-96158776 | None:intergenic | 40.0% | |
| CATGATCTCAAATGCTCTCT+GGG | + | chr3.4:96158758-96158777 | None:intergenic | 40.0% | |
| CGTTTAGATGAAGGAGAAGA+AGG | + | chr3.4:96159313-96159332 | None:intergenic | 40.0% | |
| GATGAAGCAACACCATTATC+AGG | + | chr3.4:96159428-96159447 | None:intergenic | 40.0% | |
| TCCTTCATCTAAACGCCAAA+AGG | - | chr3.4:96159318-96159337 | MS.gene69102:intron | 40.0% | |
| TTAGATGAAGGAGAAGAAGG+AGG | + | chr3.4:96159310-96159329 | None:intergenic | 40.0% | |
| TTGTCATCGGAAGAAGATGA+AGG | + | chr3.4:96159286-96159305 | None:intergenic | 40.0% | |
| ! | ACCTTTTGGCGTTTAGATGA+AGG | + | chr3.4:96159322-96159341 | None:intergenic | 40.0% |
| ! | TCTTGATTTGAATTCTCCGG+TGG | + | chr3.4:96159458-96159477 | None:intergenic | 40.0% |
| ! | TTACCGGAGTTGTTGTTGTT+GGG | + | chr3.4:96159259-96159278 | None:intergenic | 40.0% |
| ! | TTCTCAAAGGCTCTTTTGGT+GGG | + | chr3.4:96158615-96158634 | None:intergenic | 40.0% |
| ! | TTTACCGGAGTTGTTGTTGT+TGG | + | chr3.4:96159260-96159279 | None:intergenic | 40.0% |
| !! | CCCCCTAAGTATTGATTCTT+TGG | - | chr3.4:96158913-96158932 | MS.gene69102:intron | 40.0% |
| !! | CGGATTGGAGAAAAACCTTT+TGG | + | chr3.4:96159336-96159355 | None:intergenic | 40.0% |
| !! | GAGAAAAAAGCGTAACGGAT+TGG | + | chr3.4:96159351-96159370 | None:intergenic | 40.0% |
| !!! | TTAGGTTGAGCACATTTTCC+GGG | + | chr3.4:96159494-96159513 | None:intergenic | 40.0% |
| AATGCTCTCTTGCTGAGAAG+AGG | + | chr3.4:96158660-96158679 | None:intergenic | 45.0% | |
| AGTCTCTAATCTCACTGACC+GGG | - | chr3.4:96158507-96158526 | MS.gene69102:CDS | 45.0% | |
| ATGCTCTCTTGCTGAGAAGA+GGG | + | chr3.4:96158659-96158678 | None:intergenic | 45.0% | |
| CAAGTCAAAAATGGACCAGG+GGG | + | chr3.4:96158948-96158967 | None:intergenic | 45.0% | |
| CCAAGTCAAAAATGGACCAG+GGG | + | chr3.4:96158949-96158968 | None:intergenic | 45.0% | |
| CCATGATCTCAAATGCTCTC+TGG | + | chr3.4:96158759-96158778 | None:intergenic | 45.0% | |
| CTGTTCTCCATGAGTCTGAA+AGG | + | chr3.4:96158561-96158580 | None:intergenic | 45.0% | |
| GACCAAGTCAAAAATGGACC+AGG | + | chr3.4:96158951-96158970 | None:intergenic | 45.0% | |
| GGTTCATCGATCTGAGCATT+AGG | + | chr3.4:96159512-96159531 | None:intergenic | 45.0% | |
| GTTTCAACGAGACACAACAG+TGG | - | chr3.4:96159223-96159242 | MS.gene69102:intron | 45.0% | |
| TAACGAACCATCAGCAATCG+CGG | + | chr3.4:96159573-96159592 | None:intergenic | 45.0% | |
| TCATCATTAGCAGCTGCTAC+AGG | + | chr3.4:96159533-96159552 | None:intergenic | 45.0% | |
| TCTCCATGAGTCTGAAAGGA+GGG | + | chr3.4:96158557-96158576 | None:intergenic | 45.0% | |
| TGATCTCAAATGCTCTCTGG+GGG | + | chr3.4:96158756-96158775 | None:intergenic | 45.0% | |
| TTCCCCAACAACAACAACTC+CGG | - | chr3.4:96159253-96159272 | MS.gene69102:intron | 45.0% | |
| TTCTCCATGAGTCTGAAAGG+AGG | + | chr3.4:96158558-96158577 | None:intergenic | 45.0% | |
| ! | CTTCTCAAAGGCTCTTTTGG+TGG | + | chr3.4:96158616-96158635 | None:intergenic | 45.0% |
| ! | TACCGGAGTTGTTGTTGTTG+GGG | + | chr3.4:96159258-96159277 | None:intergenic | 45.0% |
| ! | TCTCAAAGGCTCTTTTGGTG+GGG | + | chr3.4:96158614-96158633 | None:intergenic | 45.0% |
| !! | CCAGAGAGCATTTGAGATCA+TGG | - | chr3.4:96158756-96158775 | MS.gene69102:CDS | 45.0% |
| !! | CTTCTCAGCAAGAGAGCATT+TGG | - | chr3.4:96158660-96158679 | MS.gene69102:intron | 45.0% |
| AACGAACCATCAGCAATCGC+GGG | + | chr3.4:96159572-96159591 | None:intergenic | 50.0% | |
| AGACACACACCCACAAAACC+CGG | - | chr3.4:96158730-96158749 | MS.gene69102:intron | 50.0% | |
| GTACCCTCCTTTCAGACTCA+TGG | - | chr3.4:96158551-96158570 | MS.gene69102:CDS | 50.0% | |
| GTCTCTAATCTCACTGACCG+GGG | - | chr3.4:96158508-96158527 | MS.gene69102:CDS | 50.0% | |
| TCAACGAGACACAACAGTGG+TGG | - | chr3.4:96159226-96159245 | MS.gene69102:intron | 50.0% | |
| TGCTGAGAAGAGGGAGATGT+GGG | + | chr3.4:96158650-96158669 | None:intergenic | 50.0% | |
| TGCTTCATCGGAGAAACCAC+CGG | - | chr3.4:96159439-96159458 | MS.gene69102:intron | 50.0% | |
| TGTGGGTGTGTGTCTTGAGT+GGG | + | chr3.4:96158725-96158744 | None:intergenic | 50.0% | |
| TTGCTGAGAAGAGGGAGATG+TGG | + | chr3.4:96158651-96158670 | None:intergenic | 50.0% | |
| TTGTGGGTGTGTGTCTTGAG+TGG | + | chr3.4:96158726-96158745 | None:intergenic | 50.0% | |
| ! | CATTTTCCGGGATCGACAGA+CGG | + | chr3.4:96159482-96159501 | None:intergenic | 50.0% |
| ! | GCTCTTTTGGTGGGGATGTT+TGG | + | chr3.4:96158606-96158625 | None:intergenic | 50.0% |
| !! | CCCCTGGTCCATTTTTGACT+TGG | - | chr3.4:96158946-96158965 | MS.gene69102:intron | 50.0% |
| !! | TGACTTGGTCTCTGATGACG+TGG | - | chr3.4:96158961-96158980 | MS.gene69102:intron | 50.0% |
| !! | TGGGGATGTTTGGTGTGTTG+CGG | + | chr3.4:96158596-96158615 | None:intergenic | 50.0% |
| CAAGAACCGTCTGTCGATCC+CGG | - | chr3.4:96159473-96159492 | MS.gene69102:intron | 55.0% | |
| CACGTGGCACCAAACACAAG+GGG | + | chr3.4:96158995-96159014 | None:intergenic | 55.0% | |
| CCACGTGGCACCAAACACAA+GGG | + | chr3.4:96158996-96159015 | None:intergenic | 55.0% | |
| GCATCCAGACCCCTTGTGTT+TGG | - | chr3.4:96158983-96159002 | MS.gene69102:intron | 55.0% | |
| GGAGTTGCCAGTACCAAACG+GGG | - | chr3.4:96158529-96158548 | MS.gene69102:CDS | 55.0% | |
| GGGAGTTGCCAGTACCAAAC+GGG | - | chr3.4:96158528-96158547 | MS.gene69102:CDS | 55.0% | |
| GGGGAGTTGCCAGTACCAAA+CGG | - | chr3.4:96158527-96158546 | MS.gene69102:CDS | 55.0% | |
| GTGGGTGTGTGTCTTGAGTG+GGG | + | chr3.4:96158724-96158743 | None:intergenic | 55.0% | |
| TCCACGTGGCACCAAACACA+AGG | + | chr3.4:96158997-96159016 | None:intergenic | 55.0% | |
| TGGGTGTGTGTCTTGAGTGG+GGG | + | chr3.4:96158723-96158742 | None:intergenic | 55.0% | |
| ! | GTCTTGAGTGGGGGGTTTTG+AGG | + | chr3.4:96158714-96158733 | None:intergenic | 55.0% |
| !! | GGATGTTTGGTGTGTTGCGG+GGG | + | chr3.4:96158593-96158612 | None:intergenic | 55.0% |
| !! | GGGATGTTTGGTGTGTTGCG+GGG | + | chr3.4:96158594-96158613 | None:intergenic | 55.0% |
| !! | GGGGATGTTTGGTGTGTTGC+GGG | + | chr3.4:96158595-96158614 | None:intergenic | 55.0% |
| !! | GTTTGGTACTGGCAACTCCC+CGG | + | chr3.4:96158528-96158547 | None:intergenic | 55.0% |
| !! | TGAAAGGAGGGTACCCCGTT+TGG | + | chr3.4:96158545-96158564 | None:intergenic | 55.0% |
| GCAACTCCCGCGATTGCTGA+TGG | - | chr3.4:96159563-96159582 | MS.gene69102:CDS | 60.0% | |
| GCAATCGCGGGAGTTGCATC+AGG | + | chr3.4:96159560-96159579 | None:intergenic | 60.0% | |
| GGCACCAAACACAAGGGGTC+TGG | + | chr3.4:96158990-96159009 | None:intergenic | 60.0% | |
| GGGTGTGTGTCTTGAGTGGG+GGG | + | chr3.4:96158722-96158741 | None:intergenic | 60.0% | |
| ! | CTCAAATGCTCTCTGGGGGC+CGG | + | chr3.4:96158752-96158771 | None:intergenic | 60.0% |
| ! | TCAAATGCTCTCTGGGGGCC+GGG | + | chr3.4:96158751-96158770 | None:intergenic | 60.0% |
| !! | CCCTTGTGTTTGGTGCCACG+TGG | - | chr3.4:96158993-96159012 | MS.gene69102:intron | 60.0% |
| !! | CTTTGGCAGTTTTGGCCCCC+TGG | - | chr3.4:96158930-96158949 | MS.gene69102:intron | 60.0% |
| !! | GAGGGTACCCCGTTTGGTAC+TGG | + | chr3.4:96158539-96158558 | None:intergenic | 60.0% |
| !! | CTCTGGGGGCCGGGTTTTGT+GGG | + | chr3.4:96158742-96158761 | None:intergenic | 65.0% |
| !! | TCTCTGGGGGCCGGGTTTTG+TGG | + | chr3.4:96158743-96158762 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 96158490 | 96159595 | 96158490 | ID=MS.gene69102 |
| chr3.4 | mRNA | 96158490 | 96159595 | 96158490 | ID=MS.gene69102.t1;Parent=MS.gene69102 |
| chr3.4 | exon | 96159535 | 96159595 | 96159535 | ID=MS.gene69102.t1.exon1;Parent=MS.gene69102.t1 |
| chr3.4 | CDS | 96159535 | 96159595 | 96159535 | ID=cds.MS.gene69102.t1;Parent=MS.gene69102.t1 |
| chr3.4 | exon | 96158746 | 96158882 | 96158746 | ID=MS.gene69102.t1.exon2;Parent=MS.gene69102.t1 |
| chr3.4 | CDS | 96158746 | 96158882 | 96158746 | ID=cds.MS.gene69102.t1;Parent=MS.gene69102.t1 |
| chr3.4 | exon | 96158490 | 96158660 | 96158490 | ID=MS.gene69102.t1.exon3;Parent=MS.gene69102.t1 |
| chr3.4 | CDS | 96158490 | 96158660 | 96158490 | ID=cds.MS.gene69102.t1;Parent=MS.gene69102.t1 |
| Gene Sequence |
| Protein sequence |
