Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70056.t1 | XP_003604737.1 | 98.8 | 607 | 7 | 0 | 1 | 607 | 1 | 607 | 0.00E+00 | 1220.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70056.t1 | Q9M040 | 83.1 | 608 | 97 | 3 | 1 | 607 | 1 | 603 | 9.6e-301 | 1033.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70056.t1 | G7JQ58 | 98.8 | 607 | 7 | 0 | 1 | 607 | 1 | 607 | 0.0e+00 | 1220.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70056 | MS.gene02488 | PPI |
| MS.gene70056 | MS.gene017382 | PPI |
| MS.gene81954 | MS.gene70056 | PPI |
| MS.gene70056 | MS.gene02654 | PPI |
| MS.gene064505 | MS.gene70056 | PPI |
| MS.gene81957 | MS.gene70056 | PPI |
| MS.gene26127 | MS.gene70056 | PPI |
| MS.gene33522 | MS.gene70056 | PPI |
| MS.gene013678 | MS.gene70056 | PPI |
| MS.gene02655 | MS.gene70056 | PPI |
| MS.gene70056 | MS.gene02651 | PPI |
| MS.gene70056 | MS.gene81956 | PPI |
| MS.gene70056 | MS.gene013671 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70056.t1 | MTR_4g017200 | 98.847 | 607 | 7 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1247 |
| MS.gene70056.t1 | MTR_5g046610 | 98.682 | 607 | 8 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1243 |
| MS.gene70056.t1 | MTR_7g069540 | 85.033 | 608 | 87 | 3 | 1 | 607 | 1 | 605 | 0.0 | 1058 |
| MS.gene70056.t1 | MTR_7g069500 | 82.043 | 607 | 77 | 5 | 1 | 607 | 1 | 575 | 0.0 | 1003 |
| MS.gene70056.t1 | MTR_2g015560 | 79.094 | 574 | 120 | 0 | 34 | 607 | 9 | 582 | 0.0 | 961 |
| MS.gene70056.t1 | MTR_2g009330 | 69.081 | 566 | 174 | 1 | 40 | 604 | 44 | 609 | 0.0 | 861 |
| MS.gene70056.t1 | MTR_5g046620 | 54.545 | 242 | 31 | 4 | 237 | 476 | 1 | 165 | 3.77e-73 | 232 |
| MS.gene70056.t1 | MTR_3g099190 | 23.670 | 545 | 353 | 18 | 22 | 535 | 58 | 570 | 3.75e-22 | 101 |
| MS.gene70056.t1 | MTR_1g011530 | 68.421 | 57 | 15 | 1 | 353 | 409 | 31 | 84 | 4.50e-21 | 89.0 |
| MS.gene70056.t1 | MTR_2g027220 | 23.063 | 555 | 378 | 16 | 40 | 563 | 55 | 591 | 3.57e-18 | 89.0 |
| MS.gene70056.t1 | MTR_2g013120 | 22.332 | 506 | 353 | 15 | 51 | 535 | 88 | 574 | 9.31e-17 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70056.t1 | AT5G01320 | 82.867 | 607 | 100 | 2 | 1 | 607 | 1 | 603 | 0.0 | 1058 |
| MS.gene70056.t1 | AT4G33070 | 82.266 | 609 | 104 | 4 | 1 | 607 | 1 | 607 | 0.0 | 1053 |
| MS.gene70056.t1 | AT5G54960 | 81.773 | 609 | 107 | 2 | 1 | 607 | 1 | 607 | 0.0 | 1044 |
| MS.gene70056.t1 | AT5G01330 | 82.799 | 593 | 98 | 3 | 17 | 607 | 2 | 592 | 0.0 | 1019 |
| MS.gene70056.t1 | AT3G48560 | 21.875 | 512 | 348 | 14 | 51 | 535 | 103 | 589 | 2.44e-15 | 80.1 |
Find 160 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTTCATTGGAACATTT+TGG | 0.082189 | 4.2:-84876470 | MS.gene70056:CDS |
| GGGCCTAATTCTAATGATTT+TGG | 0.114847 | 4.2:-84877870 | MS.gene70056:CDS |
| TACTTTGGAGACAAGGAAAA+TGG | 0.246632 | 4.2:+84876780 | None:intergenic |
| CTGCTTATGAGAATTATTTC+AGG | 0.247181 | 4.2:-84876212 | MS.gene70056:CDS |
| GTTTGTGATCCTCGGGAATT+AGG | 0.253706 | 4.2:+84876490 | None:intergenic |
| CGATTATTGTTCAGCCTGAT+AGG | 0.276114 | 4.2:-84876323 | MS.gene70056:CDS |
| CATTGGTGATGGAAGTTTCC+AGG | 0.279678 | 4.2:-84875660 | MS.gene70056:intron |
| TCTGAAGTTCACTGAGGATT+AGG | 0.294008 | 4.2:+84874970 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.294152 | 4.2:-84877840 | MS.gene70056:CDS |
| AAGCATAAACAATCCTTCTT+TGG | 0.294164 | 4.2:+84875078 | None:intergenic |
| GTCCCAAAATCATTAGAATT+AGG | 0.303299 | 4.2:+84877867 | None:intergenic |
| GCAGATGGCATGACGGAATA+TGG | 0.315658 | 4.2:+84876519 | None:intergenic |
| CGGATATGCTCAAGCTGTTC+CGG | 0.328908 | 4.2:-84875702 | MS.gene70056:CDS |
| TGAAAATAGGTCCAGCAAAT+AGG | 0.336734 | 4.2:+84876394 | None:intergenic |
| ATTACTTACCCACATCCTTT+TGG | 0.345387 | 4.2:+84876033 | None:intergenic |
| CAGCTTATGCTTATGTAAAC+AGG | 0.348670 | 4.2:+84876849 | None:intergenic |
| GATTTCAAAGGCAAACCTTC+AGG | 0.356531 | 4.2:+84876180 | None:intergenic |
| AAGGAGATTAATTACCTTAG+TGG | 0.360062 | 4.2:+84875294 | None:intergenic |
| TCTCCAATCACAACCCTATC+AGG | 0.360164 | 4.2:+84876309 | None:intergenic |
| TATGAGTTCCAGATGCAATA+TGG | 0.362998 | 4.2:-84875755 | MS.gene70056:CDS |
| CAGATGCAATATGGTTCAAT+TGG | 0.366605 | 4.2:-84875746 | MS.gene70056:CDS |
| CAGTTCTTGATCACATTGTA+TGG | 0.371185 | 4.2:+84875370 | None:intergenic |
| GAACTGTAATCATTGAAAAT+AGG | 0.384366 | 4.2:+84876381 | None:intergenic |
| GAGGATCACAAACATTTCAT+TGG | 0.389134 | 4.2:-84876480 | MS.gene70056:CDS |
| GCTGATGCATACCTATTTGC+TGG | 0.395610 | 4.2:-84876405 | MS.gene70056:CDS |
| GAAGCTAGGGATTGGGTTGA+AGG | 0.395680 | 4.2:+84878191 | None:intergenic |
| ATTGGAGATGGTCCTACATT+TGG | 0.399314 | 4.2:-84876294 | MS.gene70056:CDS |
| TCAGCTTCGGTTCCGCGATC+AGG | 0.414869 | 4.2:+84878063 | None:intergenic |
| CTGAACCTAGAGAGCCTTTG+AGG | 0.417588 | 4.2:-84876158 | MS.gene70056:CDS |
| CAATTGAACCATATTGCATC+TGG | 0.423310 | 4.2:+84875747 | None:intergenic |
| TCTGGAAACACCTAAGTTCC+TGG | 0.424227 | 4.2:+84877802 | None:intergenic |
| CTTGCTTTCTTTCAGTGCTG+TGG | 0.430068 | 4.2:+84876872 | None:intergenic |
| CAAGCAATCACTCGCTTCTC+CGG | 0.431538 | 4.2:+84875683 | None:intergenic |
| ATCATGGATTTCAACTTCAA+TGG | 0.433034 | 4.2:+84875396 | None:intergenic |
| GCCGTGCTAGGTGGCTGCCT+AGG | 0.433379 | 4.2:+84878156 | None:intergenic |
| TAGCAAAGAGTTGCTTGAAT+GGG | 0.434683 | 4.2:-84875025 | MS.gene70056:CDS |
| CTGATGGATATGCAAGGTCT+AGG | 0.436168 | 4.2:-84877998 | MS.gene70056:CDS |
| TTCAGATGAAGCTAGGGATT+GGG | 0.437372 | 4.2:+84878184 | None:intergenic |
| AGTTGCTTGAATGGGGATCA+AGG | 0.443953 | 4.2:-84875017 | MS.gene70056:CDS |
| CTGAAATTGCCAAAAGGATG+TGG | 0.445246 | 4.2:-84876042 | MS.gene70056:CDS |
| AGCGTGATTAATGCAATTGC+TGG | 0.447921 | 4.2:-84877933 | MS.gene70056:CDS |
| TTCAATGATTACAGTTCTGT+TGG | 0.449416 | 4.2:-84876375 | MS.gene70056:CDS |
| CTAGCAAAGAGTTGCTTGAA+TGG | 0.452164 | 4.2:-84875026 | MS.gene70056:CDS |
| TTGTGCCGAGATTGTGGAAT+CGG | 0.455522 | 4.2:-84876427 | MS.gene70056:CDS |
| CTAAGTTCCTGGCTAAAATC+AGG | 0.456762 | 4.2:+84877813 | None:intergenic |
| TTACCAGTGATTTGTATTGT+TGG | 0.457463 | 4.2:-84877894 | MS.gene70056:CDS |
| ATTCAGATGAAGCTAGGGAT+TGG | 0.458364 | 4.2:+84878183 | None:intergenic |
| ACTGCTGTTATTGCCGAGAC+AGG | 0.459219 | 4.2:-84876090 | MS.gene70056:CDS |
| GGAGACAAGGAAAATGGAAC+AGG | 0.460250 | 4.2:+84876786 | None:intergenic |
| TTCGGACCGGCTACTAGTAC+TGG | 0.460290 | 4.2:+84876600 | None:intergenic |
| GGCAGCAGTGGAAGCAGCTG+CGG | 0.462599 | 4.2:-84876646 | MS.gene70056:CDS |
| CCAGACTGTTACTTGCTACC+AGG | 0.464384 | 4.2:-84877784 | MS.gene70056:intron |
| CCGTGCTAGGTGGCTGCCTA+GGG | 0.470674 | 4.2:+84878157 | None:intergenic |
| CATTGAGGTGATTGTTCACA+AGG | 0.471803 | 4.2:-84875055 | MS.gene70056:CDS |
| ATTGTTAATCAAGAAGATTA+TGG | 0.473966 | 4.2:+84875429 | None:intergenic |
| CAAGGTCAGGTTAAAGTCAC+CGG | 0.479761 | 4.2:+84878094 | None:intergenic |
| TGCTGTAACGAACTGAATGC+TGG | 0.480708 | 4.2:-84878029 | MS.gene70056:CDS |
| ATATGCAAGGTCTAGGGGTG+TGG | 0.482988 | 4.2:-84877991 | MS.gene70056:CDS |
| GTTGTTACATTTACTGTTGG+TGG | 0.484847 | 4.2:-84877960 | MS.gene70056:CDS |
| TTAACCCTCAAAGGCTCTCT+AGG | 0.484853 | 4.2:+84876153 | None:intergenic |
| TTGTTACATTTACTGTTGGT+GGG | 0.485744 | 4.2:-84877959 | MS.gene70056:CDS |
| GAAGCAATTGAGACAGCAAC+AGG | 0.485883 | 4.2:-84875102 | MS.gene70056:CDS |
| ATTGAGTAATCCAATGGGAT+TGG | 0.486444 | 4.2:-84876670 | MS.gene70056:CDS |
| CATACAATGTGATCAAGAAC+TGG | 0.487109 | 4.2:-84875369 | MS.gene70056:CDS |
| ACTGCTGCCTCCAATCCCAT+TGG | 0.487915 | 4.2:+84876660 | None:intergenic |
| CCTGGTAGCAAGTAACAGTC+TGG | 0.488780 | 4.2:+84877784 | None:intergenic |
| ATGAAATGTTTGTGATCCTC+GGG | 0.490139 | 4.2:+84876483 | None:intergenic |
| ACAGGTTCACGGCTGAAAGT+AGG | 0.491232 | 4.2:+84876804 | None:intergenic |
| TGCTACTCTTAGTTTCGGAC+CGG | 0.492737 | 4.2:+84876587 | None:intergenic |
| CAGTGATTTGTATTGTTGGT+GGG | 0.495308 | 4.2:-84877890 | MS.gene70056:CDS |
| AAGCTAGGGATTGGGTTGAA+GGG | 0.497192 | 4.2:+84878192 | None:intergenic |
| CAGGTTCACGGCTGAAAGTA+GGG | 0.500437 | 4.2:+84876805 | None:intergenic |
| ACAATGGTCAAGGAAATTGC+TGG | 0.500572 | 4.2:-84875318 | MS.gene70056:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.502043 | 4.2:-84875742 | MS.gene70056:CDS |
| CCAGTGATTTGTATTGTTGG+TGG | 0.502339 | 4.2:-84877891 | MS.gene70056:CDS |
| TGATGGATATGCAAGGTCTA+GGG | 0.503579 | 4.2:-84877997 | MS.gene70056:CDS |
| CAGCCTGATAGGGTTGTGAT+TGG | 0.505425 | 4.2:-84876312 | MS.gene70056:CDS |
| TAACAGATTGAGTAATCCAA+TGG | 0.506535 | 4.2:-84876676 | MS.gene70056:intron |
| GAACTGGAATTACACTGGAT+TGG | 0.506968 | 4.2:-84875353 | MS.gene70056:CDS |
| AGCAATTTCCTTGACCATTG+TGG | 0.508734 | 4.2:+84875320 | None:intergenic |
| TCCGTCATGCCATCTGCTAA+AGG | 0.509115 | 4.2:-84876513 | MS.gene70056:CDS |
| AATGAAATGTTTGTGATCCT+CGG | 0.509140 | 4.2:+84876482 | None:intergenic |
| TCACATTGTATGGTCCATCA+TGG | 0.509244 | 4.2:+84875380 | None:intergenic |
| GGGTTGATTCAGATGAAGCT+AGG | 0.509627 | 4.2:+84878177 | None:intergenic |
| CACTTGCGAAGCGTCTTAAG+AGG | 0.509787 | 4.2:-84876242 | MS.gene70056:CDS |
| TGCATGATTCGAGGGATCCT+AGG | 0.513172 | 4.2:+84878282 | None:intergenic |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 4.2:-84875734 | MS.gene70056:CDS |
| TCAGGTGGTCGAGCAAGGTC+AGG | 0.515021 | 4.2:+84878081 | None:intergenic |
| TATGCAAGGTCTAGGGGTGT+GGG | 0.518468 | 4.2:-84877990 | MS.gene70056:CDS |
| AGGAAAATGGAACAGGTTCA+CGG | 0.519353 | 4.2:+84876793 | None:intergenic |
| CTTCCACTAGTCGCCGTGCT+AGG | 0.519963 | 4.2:+84878144 | None:intergenic |
| TGAACCTAGAGAGCCTTTGA+GGG | 0.523049 | 4.2:-84876157 | MS.gene70056:CDS |
| CCACCTAGCACGGCGACTAG+TGG | 0.523913 | 4.2:-84878147 | MS.gene70056:CDS |
| TTGCCGAGACAGGGGACTCA+TGG | 0.526361 | 4.2:-84876080 | MS.gene70056:CDS |
| GATTATTGTTCAGCCTGATA+GGG | 0.526387 | 4.2:-84876322 | MS.gene70056:CDS |
| CGCGATCAGGTGGTCGAGCA+AGG | 0.527311 | 4.2:+84878076 | None:intergenic |
| ATAACAACACCTTCATCAAA+CGG | 0.529906 | 4.2:-84878239 | MS.gene70056:CDS |
| TGTGTTGTTACATTTACTGT+TGG | 0.530399 | 4.2:-84877963 | MS.gene70056:CDS |
| AGCTAGGGATTGGGTTGAAG+GGG | 0.531081 | 4.2:+84878193 | None:intergenic |
| AACAGATTGAGTAATCCAAT+GGG | 0.531127 | 4.2:-84876675 | MS.gene70056:intron |
| AGGAAATTGCTGGACCACTA+AGG | 0.533010 | 4.2:-84875308 | MS.gene70056:intron |
| ATAGGCTGTGGTCAACAACT+TGG | 0.534954 | 4.2:-84876928 | MS.gene70056:intron |
| TGGTCTGTTGGTGCAACTCT+CGG | 0.535873 | 4.2:-84875722 | MS.gene70056:CDS |
| ACCGACATCTTCACCGTCCC+CGG | 0.536179 | 4.2:-84878113 | MS.gene70056:CDS |
| GAGTAATCCAATGGGATTGG+AGG | 0.536971 | 4.2:-84876667 | MS.gene70056:CDS |
| CAAAAGCTGAAATTGCCAAA+AGG | 0.537401 | 4.2:-84876048 | MS.gene70056:CDS |
| CCCTAGGCAGCCACCTAGCA+CGG | 0.538317 | 4.2:-84878157 | MS.gene70056:CDS |
| GGAATTAGGCCTTTAGCAGA+TGG | 0.539302 | 4.2:+84876504 | None:intergenic |
| ATCTTCTTGATTAACAATGG+TGG | 0.543934 | 4.2:-84875424 | MS.gene70056:CDS |
| ATCAGCCGATTCCACAATCT+CGG | 0.548115 | 4.2:+84876422 | None:intergenic |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 4.2:-84875671 | MS.gene70056:CDS |
| AAAAGAACATTAACCCTCAA+AGG | 0.553752 | 4.2:+84876144 | None:intergenic |
| AATGGGATTGGAGGCAGCAG+TGG | 0.555789 | 4.2:-84876658 | MS.gene70056:CDS |
| GTTGCTTGAATGGGGATCAA+GGG | 0.556008 | 4.2:-84875016 | MS.gene70056:CDS |
| GACAGCAACAGGACCAAAGA+AGG | 0.556311 | 4.2:-84875091 | MS.gene70056:CDS |
| GGTTGATTCAGATGAAGCTA+GGG | 0.561038 | 4.2:+84878178 | None:intergenic |
| AAACCATGAGTCCCCTGTCT+CGG | 0.564220 | 4.2:+84876077 | None:intergenic |
| GATAGGGTTGTGATTGGAGA+TGG | 0.564456 | 4.2:-84876306 | MS.gene70056:CDS |
| CTGCTGTTATTGCCGAGACA+GGG | 0.566446 | 4.2:-84876089 | MS.gene70056:CDS |
| ATGGTGATTTGCATGATTCG+AGG | 0.568880 | 4.2:+84878273 | None:intergenic |
| ATTGAAGTTGAAATCCATGA+TGG | 0.569661 | 4.2:-84875394 | MS.gene70056:CDS |
| ATCAAAACACATCCAAATGT+AGG | 0.572453 | 4.2:+84876282 | None:intergenic |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.574293 | 4.2:-84875677 | MS.gene70056:CDS |
| AAGGTCAGGTTAAAGTCACC+GGG | 0.574556 | 4.2:+84878095 | None:intergenic |
| CAGGTTAAAGTCACCGGGGA+CGG | 0.576121 | 4.2:+84878100 | None:intergenic |
| GATGCTATCCACAATGGTCA+AGG | 0.577985 | 4.2:-84875328 | MS.gene70056:CDS |
| GAAACAGTGCCGTTTGATGA+AGG | 0.578220 | 4.2:+84878230 | None:intergenic |
| ATAATCTTCTTGATTAACAA+TGG | 0.579911 | 4.2:-84875427 | MS.gene70056:CDS |
| GTTGTTATTATGTCGTTGCA+TGG | 0.581178 | 4.2:+84878254 | None:intergenic |
| GGATTGTTTATGCTTCATTG+AGG | 0.581782 | 4.2:-84875070 | MS.gene70056:CDS |
| AAAATCTTACTTTGGAGACA+AGG | 0.582178 | 4.2:+84876773 | None:intergenic |
| CCACCAACAATACAAATCAC+TGG | 0.587155 | 4.2:+84877891 | None:intergenic |
| CCACTAGTCGCCGTGCTAGG+TGG | 0.587784 | 4.2:+84878147 | None:intergenic |
| GAAGTTCACTGAGGATTAGG+AGG | 0.592723 | 4.2:+84874973 | None:intergenic |
| GCTTCATCTGAATCAACCCT+AGG | 0.593184 | 4.2:-84878173 | MS.gene70056:CDS |
| GCCTTTAGCAGATGGCATGA+CGG | 0.595060 | 4.2:+84876512 | None:intergenic |
| ATCAAGAACTGGAATTACAC+TGG | 0.596050 | 4.2:-84875358 | MS.gene70056:CDS |
| TGGTGATTTGCATGATTCGA+GGG | 0.596910 | 4.2:+84878274 | None:intergenic |
| AATGCTGGATATGCTGCTGA+TGG | 0.598505 | 4.2:-84878014 | MS.gene70056:CDS |
| GCTGAAAGTAGGGTGAGGAA+TGG | 0.602836 | 4.2:+84876815 | None:intergenic |
| CTGTCCACATCTCAGCATTG+TGG | 0.605032 | 4.2:+84875456 | None:intergenic |
| GCTTCGGTTCCGCGATCAGG+TGG | 0.605721 | 4.2:+84878066 | None:intergenic |
| TCTCTAGGTTCAGATTTCAA+AGG | 0.609595 | 4.2:+84876168 | None:intergenic |
| GTGAAACCAGTACTAGTAGC+CGG | 0.613433 | 4.2:-84876606 | MS.gene70056:CDS |
| TGCTGTTATTGCCGAGACAG+GGG | 0.619008 | 4.2:-84876088 | MS.gene70056:CDS |
| TTCAACATGGACACAAACCT+AGG | 0.622509 | 4.2:-84878299 | None:intergenic |
| AGCAAAGAGTTGCTTGAATG+GGG | 0.623231 | 4.2:-84875024 | MS.gene70056:CDS |
| TCACGGCTGAAAGTAGGGTG+AGG | 0.630951 | 4.2:+84876810 | None:intergenic |
| TGCTAAAGGCCTAATTCCCG+AGG | 0.631788 | 4.2:-84876499 | MS.gene70056:CDS |
| TGAAATTGCCAAAAGGATGT+GGG | 0.632720 | 4.2:-84876041 | MS.gene70056:intron |
| TTATATGTAGGTGACAGCAC+AGG | 0.638117 | 4.2:-84875485 | MS.gene70056:intron |
| GTGTCCACAATGCTGAGATG+TGG | 0.644135 | 4.2:-84875460 | MS.gene70056:CDS |
| CTTGCTCGACCACCTGATCG+CGG | 0.651003 | 4.2:-84878075 | MS.gene70056:CDS |
| ACCGGGGACGGTGAAGATGT+CGG | 0.651929 | 4.2:+84878112 | None:intergenic |
| GATGGATATGCAAGGTCTAG+GGG | 0.660780 | 4.2:-84877996 | MS.gene70056:CDS |
| AAAATTTCTGAAGTTCACTG+AGG | 0.695310 | 4.2:+84874964 | None:intergenic |
| GCACGGCGACTAGTGGAAGT+CGG | 0.702782 | 4.2:-84878140 | MS.gene70056:CDS |
| ATGCTGCTGATGGATATGCA+AGG | 0.712084 | 4.2:-84878004 | MS.gene70056:CDS |
| TTGGTTGATGCTATCCACAA+TGG | 0.725826 | 4.2:-84875334 | MS.gene70056:CDS |
| AGGTCAGGTTAAAGTCACCG+GGG | 0.791887 | 4.2:+84878096 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAATAAAAAT+AGG | + | chr4.2:84875539-84875558 | None:intergenic | 0.0% |
| !!! | ATTTTTATTTTTTTATTTTT+AGG | - | chr4.2:84875539-84875558 | MS.gene70056:intron | 0.0% |
| !! | TTATAAAACTATTATTATCA+GGG | + | chr4.2:84875660-84875679 | None:intergenic | 10.0% |
| !! | TTTATAAAACTATTATTATC+AGG | + | chr4.2:84875661-84875680 | None:intergenic | 10.0% |
| !!! | AAATTTGTCTTATTATAATT+TGG | - | chr4.2:84876060-84876079 | MS.gene70056:CDS | 10.0% |
| !! | AATCTGTTAAAAGTTATTAT+TGG | + | chr4.2:84876584-84876603 | None:intergenic | 15.0% |
| !! | TAATGATTAAAATCTTACTT+TGG | + | chr4.2:84876509-84876528 | None:intergenic | 15.0% |
| !! | TTTATATATTTGATTATGGT+AGG | - | chr4.2:84878123-84878142 | MS.gene70056:CDS | 15.0% |
| !! | TTTCAAATCTTATAAGTAAA+AGG | + | chr4.2:84875611-84875630 | None:intergenic | 15.0% |
| !!! | AAATCTGCATTTTTTTTTTT+TGG | - | chr4.2:84876259-84876278 | MS.gene70056:CDS | 15.0% |
| !!! | ATGTTTTCTAAATTATATGT+AGG | - | chr4.2:84877774-84877793 | MS.gene70056:intron | 15.0% |
| !!! | CTTATATACTTTTTGATTAT+AGG | - | chr4.2:84876325-84876344 | MS.gene70056:CDS | 15.0% |
| !! | ATAATCTTCTTGATTAACAA+TGG | - | chr4.2:84877844-84877863 | MS.gene70056:CDS | 20.0% |
| !! | ATAATTTATTGTTGTGTTGT+TGG | - | chr4.2:84875724-84875743 | MS.gene70056:CDS | 20.0% |
| !! | ATTGTTAATCAAGAAGATTA+TGG | + | chr4.2:84877845-84877864 | None:intergenic | 20.0% |
| !! | CATAATAGAAACAGTTTAAT+CGG | + | chr4.2:84877757-84877776 | None:intergenic | 20.0% |
| !!! | ATATGATTTGGTTTACTATT+TGG | - | chr4.2:84876192-84876211 | MS.gene70056:CDS | 20.0% |
| !!! | TAGAATTTGATTTTTGGTAT+TGG | - | chr4.2:84877267-84877286 | MS.gene70056:intron | 20.0% |
| !!! | TATAAAAAGTTTTCGAGTAT+AGG | - | chr4.2:84875808-84875827 | MS.gene70056:intron | 20.0% |
| !!! | TTTTAATTTCATCTTTGACT+TGG | - | chr4.2:84876551-84876570 | MS.gene70056:CDS | 20.0% |
| ! | AAAAATGTGCTAGGAAAATT+TGG | + | chr4.2:84877704-84877723 | None:intergenic | 25.0% |
| ! | AGAACGTAGCATATTAATTA+AGG | + | chr4.2:84877999-84878018 | None:intergenic | 25.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | - | chr4.2:84875431-84875450 | MS.gene70056:CDS | 25.0% |
| ! | GAACTGTAATCATTGAAAAT+AGG | + | chr4.2:84876893-84876912 | None:intergenic | 25.0% |
| ! | GTATTATTAAGTAGAAGCTT+CGG | + | chr4.2:84877730-84877749 | None:intergenic | 25.0% |
| ! | TATGCTTTCTTGATATGATT+TGG | - | chr4.2:84876180-84876199 | MS.gene70056:CDS | 25.0% |
| ! | TTTGAAAAAAATAGTGACAC+TGG | - | chr4.2:84875624-84875643 | MS.gene70056:intron | 25.0% |
| !! | AACATTTCATTGGAACATTT+TGG | - | chr4.2:84876801-84876820 | MS.gene70056:CDS | 25.0% |
| !! | ACATTTCATTGGAACATTTT+GGG | - | chr4.2:84876802-84876821 | MS.gene70056:CDS | 25.0% |
| !! | ATGTTTTCAATATGAAGTGT+CGG | - | chr4.2:84878075-84878094 | MS.gene70056:CDS | 25.0% |
| !! | ATTGGTTGACTTTGTTAAAA+TGG | - | chr4.2:84876302-84876321 | MS.gene70056:CDS | 25.0% |
| !!! | AGCTTCTAGAATTTGATTTT+TGG | - | chr4.2:84877261-84877280 | MS.gene70056:intron | 25.0% |
| !!! | CGTAGCATATTTTGATAAAA+AGG | - | chr4.2:84877480-84877499 | MS.gene70056:intron | 25.0% |
| AAAAGAACATTAACCCTCAA+AGG | + | chr4.2:84877130-84877149 | None:intergenic | 30.0% | |
| AACAGATTGAGTAATCCAAT+GGG | - | chr4.2:84876596-84876615 | MS.gene70056:CDS | 30.0% | |
| AAGCATAAACAATCCTTCTT+TGG | + | chr4.2:84878196-84878215 | None:intergenic | 30.0% | |
| AAGGAGATTAATTACCTTAG+TGG | + | chr4.2:84877980-84877999 | None:intergenic | 30.0% | |
| AATGAAATGTTTGTGATCCT+CGG | + | chr4.2:84876792-84876811 | None:intergenic | 30.0% | |
| ATAACAACACCTTCATCAAA+CGG | - | chr4.2:84875032-84875051 | MS.gene70056:CDS | 30.0% | |
| ATCAAAACACATCCAAATGT+AGG | + | chr4.2:84876992-84877011 | None:intergenic | 30.0% | |
| ATCATGGATTTCAACTTCAA+TGG | + | chr4.2:84877878-84877897 | None:intergenic | 30.0% | |
| ATCTTCTTGATTAACAATGG+TGG | - | chr4.2:84877847-84877866 | MS.gene70056:CDS | 30.0% | |
| ATGTGATTGCTCAATTTGAA+TGG | - | chr4.2:84876141-84876160 | MS.gene70056:CDS | 30.0% | |
| ATTGAAGTTGAAATCCATGA+TGG | - | chr4.2:84877877-84877896 | MS.gene70056:CDS | 30.0% | |
| CTGCTTATGAGAATTATTTC+AGG | - | chr4.2:84877059-84877078 | MS.gene70056:intron | 30.0% | |
| GTCCCAAAATCATTAGAATT+AGG | + | chr4.2:84875407-84875426 | None:intergenic | 30.0% | |
| TAACAGATTGAGTAATCCAA+TGG | - | chr4.2:84876595-84876614 | MS.gene70056:CDS | 30.0% | |
| TTCAATGATTACAGTTCTGT+TGG | - | chr4.2:84876896-84876915 | MS.gene70056:CDS | 30.0% | |
| TTGTTACATTTACTGTTGGT+GGG | - | chr4.2:84875312-84875331 | MS.gene70056:CDS | 30.0% | |
| TTTCATACCTATACTAGCTA+AGG | + | chr4.2:84875565-84875584 | None:intergenic | 30.0% | |
| ! | AAAATCTTACTTTGGAGACA+AGG | + | chr4.2:84876501-84876520 | None:intergenic | 30.0% |
| ! | CATTTCATTGGAACATTTTG+GGG | - | chr4.2:84876803-84876822 | MS.gene70056:CDS | 30.0% |
| ! | GGCCTAATTCTAATGATTTT+GGG | - | chr4.2:84875402-84875421 | MS.gene70056:CDS | 30.0% |
| ! | TGTGTTGTTACATTTACTGT+TGG | - | chr4.2:84875308-84875327 | MS.gene70056:intron | 30.0% |
| ! | TTACCAGTGATTTGTATTGT+TGG | - | chr4.2:84875377-84875396 | MS.gene70056:CDS | 30.0% |
| !! | AGAAAGCATAGCTTTTCAAA+TGG | + | chr4.2:84876170-84876189 | None:intergenic | 30.0% |
| !! | TACTTTTTGATTATAGGCTG+TGG | - | chr4.2:84876331-84876350 | MS.gene70056:CDS | 30.0% |
| !!! | AAAGTTTTCGAGTATAGGTT+CGG | - | chr4.2:84875813-84875832 | MS.gene70056:intron | 30.0% |
| !!! | ATTTGGATGTGTTTTGATGA+AGG | - | chr4.2:84876994-84877013 | MS.gene70056:intron | 30.0% |
| AAAAATAGTGACACTGGCAT+AGG | - | chr4.2:84875630-84875649 | MS.gene70056:intron | 35.0% | |
| AGCTGCATTTAACTGCAATT+TGG | + | chr4.2:84877337-84877356 | None:intergenic | 35.0% | |
| ATCAAGAACTGGAATTACAC+TGG | - | chr4.2:84877913-84877932 | MS.gene70056:CDS | 35.0% | |
| ATGAAATGTTTGTGATCCTC+GGG | + | chr4.2:84876791-84876810 | None:intergenic | 35.0% | |
| ATTGAGTAATCCAATGGGAT+TGG | - | chr4.2:84876601-84876620 | MS.gene70056:CDS | 35.0% | |
| CAAAAGCTGAAATTGCCAAA+AGG | - | chr4.2:84877223-84877242 | MS.gene70056:intron | 35.0% | |
| CAATTGAACCATATTGCATC+TGG | + | chr4.2:84877527-84877546 | None:intergenic | 35.0% | |
| CAGATGCAATATGGTTCAAT+TGG | - | chr4.2:84877525-84877544 | MS.gene70056:intron | 35.0% | |
| CAGCTTATGCTTATGTAAAC+AGG | + | chr4.2:84876425-84876444 | None:intergenic | 35.0% | |
| CAGTTCTTGATCACATTGTA+TGG | + | chr4.2:84877904-84877923 | None:intergenic | 35.0% | |
| CATACAATGTGATCAAGAAC+TGG | - | chr4.2:84877902-84877921 | MS.gene70056:CDS | 35.0% | |
| GAGGATCACAAACATTTCAT+TGG | - | chr4.2:84876791-84876810 | MS.gene70056:CDS | 35.0% | |
| GATTATTGTTCAGCCTGATA+GGG | - | chr4.2:84876949-84876968 | MS.gene70056:intron | 35.0% | |
| GGATTGTTTATGCTTCATTG+AGG | - | chr4.2:84878201-84878220 | MS.gene70056:CDS | 35.0% | |
| GTGATTCATGTGAACTTCAT+TGG | - | chr4.2:84876284-84876303 | MS.gene70056:CDS | 35.0% | |
| GTTGTTACATTTACTGTTGG+TGG | - | chr4.2:84875311-84875330 | MS.gene70056:CDS | 35.0% | |
| TAGCAAAGAGTTGCTTGAAT+GGG | - | chr4.2:84878246-84878265 | MS.gene70056:CDS | 35.0% | |
| TATGAGTTCCAGATGCAATA+TGG | - | chr4.2:84877516-84877535 | MS.gene70056:intron | 35.0% | |
| TCTCTAGGTTCAGATTTCAA+AGG | + | chr4.2:84877106-84877125 | None:intergenic | 35.0% | |
| TGAAAATAGGTCCAGCAAAT+AGG | + | chr4.2:84876880-84876899 | None:intergenic | 35.0% | |
| TGAAATTGCCAAAAGGATGT+GGG | - | chr4.2:84877230-84877249 | MS.gene70056:intron | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr4.2:84877529-84877548 | MS.gene70056:intron | 35.0% | |
| TGCAATTAAGGTCACATAAG+CGG | + | chr4.2:84877362-84877381 | None:intergenic | 35.0% | |
| ! | ATTACTTACCCACATCCTTT+TGG | + | chr4.2:84877241-84877260 | None:intergenic | 35.0% |
| ! | CAGTGATTTGTATTGTTGGT+GGG | - | chr4.2:84875381-84875400 | MS.gene70056:CDS | 35.0% |
| ! | CTTTTGGCAATTTCAGCTTT+TGG | + | chr4.2:84877225-84877244 | None:intergenic | 35.0% |
| ! | GCTTTTGCTACTCTTAGTTT+CGG | + | chr4.2:84876692-84876711 | None:intergenic | 35.0% |
| ! | GGGCCTAATTCTAATGATTT+TGG | - | chr4.2:84875401-84875420 | MS.gene70056:CDS | 35.0% |
| ! | GTTGTTATTATGTCGTTGCA+TGG | + | chr4.2:84875020-84875039 | None:intergenic | 35.0% |
| ! | TACTTTGGAGACAAGGAAAA+TGG | + | chr4.2:84876494-84876513 | None:intergenic | 35.0% |
| ! | TTCAGGATTTTTGTTCCTGA+AGG | - | chr4.2:84877076-84877095 | MS.gene70056:intron | 35.0% |
| ! | TTTTAGGCCTTAGCTAGTAT+AGG | - | chr4.2:84875555-84875574 | MS.gene70056:intron | 35.0% |
| !! | AGAGAGATTGAGTTGAGATT+TGG | + | chr4.2:84875514-84875533 | None:intergenic | 35.0% |
| ACAATGGTCAAGGAAATTGC+TGG | - | chr4.2:84877953-84877972 | MS.gene70056:CDS | 40.0% | |
| AGCAAAGAGTTGCTTGAATG+GGG | - | chr4.2:84878247-84878266 | MS.gene70056:CDS | 40.0% | |
| AGCAATTTCCTTGACCATTG+TGG | + | chr4.2:84877954-84877973 | None:intergenic | 40.0% | |
| AGCGTGATTAATGCAATTGC+TGG | - | chr4.2:84875338-84875357 | MS.gene70056:CDS | 40.0% | |
| AGGAAAATGGAACAGGTTCA+CGG | + | chr4.2:84876481-84876500 | None:intergenic | 40.0% | |
| ATTCAGATGAAGCTAGGGAT+TGG | + | chr4.2:84875091-84875110 | None:intergenic | 40.0% | |
| ATTGGAGATGGTCCTACATT+TGG | - | chr4.2:84876977-84876996 | MS.gene70056:intron | 40.0% | |
| CATTGAGGTGATTGTTCACA+AGG | - | chr4.2:84878216-84878235 | MS.gene70056:CDS | 40.0% | |
| CCACCAACAATACAAATCAC+TGG | + | chr4.2:84875383-84875402 | None:intergenic | 40.0% | |
| CCTCAATGCAACTGCAATTA+AGG | + | chr4.2:84877374-84877393 | None:intergenic | 40.0% | |
| CCTTAATTGCAGTTGCATTG+AGG | - | chr4.2:84877371-84877390 | MS.gene70056:intron | 40.0% | |
| CGATTATTGTTCAGCCTGAT+AGG | - | chr4.2:84876948-84876967 | MS.gene70056:intron | 40.0% | |
| CTAAGTTCCTGGCTAAAATC+AGG | + | chr4.2:84875461-84875480 | None:intergenic | 40.0% | |
| CTAGCAAAGAGTTGCTTGAA+TGG | - | chr4.2:84878245-84878264 | MS.gene70056:CDS | 40.0% | |
| CTCACGTGTCAGTGATATAT+AGG | - | chr4.2:84875774-84875793 | MS.gene70056:intron | 40.0% | |
| CTGAAATTGCCAAAAGGATG+TGG | - | chr4.2:84877229-84877248 | MS.gene70056:intron | 40.0% | |
| CTTCGGAGAAAAAATGTGCT+AGG | + | chr4.2:84877713-84877732 | None:intergenic | 40.0% | |
| GAACTGGAATTACACTGGAT+TGG | - | chr4.2:84877918-84877937 | MS.gene70056:CDS | 40.0% | |
| GATTTCAAAGGCAAACCTTC+AGG | + | chr4.2:84877094-84877113 | None:intergenic | 40.0% | |
| TATGATGTGCAAGACAAACC+TGG | + | chr4.2:84877632-84877651 | None:intergenic | 40.0% | |
| TCACATTGTATGGTCCATCA+TGG | + | chr4.2:84877894-84877913 | None:intergenic | 40.0% | |
| TTATATGTAGGTGACAGCAC+AGG | - | chr4.2:84877786-84877805 | MS.gene70056:CDS | 40.0% | |
| TTCAGATGAAGCTAGGGATT+GGG | + | chr4.2:84875090-84875109 | None:intergenic | 40.0% | |
| ! | ATGGTAGGTCTTTTGTGAAG+AGG | - | chr4.2:84878138-84878157 | MS.gene70056:CDS | 40.0% |
| ! | ATGGTGATTTGCATGATTCG+AGG | + | chr4.2:84875001-84875020 | None:intergenic | 40.0% |
| ! | CCAGTGATTTGTATTGTTGG+TGG | - | chr4.2:84875380-84875399 | MS.gene70056:CDS | 40.0% |
| ! | GGTTGATTCAGATGAAGCTA+GGG | + | chr4.2:84875096-84875115 | None:intergenic | 40.0% |
| ! | TGATGGATATGCAAGGTCTA+GGG | - | chr4.2:84875274-84875293 | MS.gene70056:intron | 40.0% |
| ! | TGGTGATTTGCATGATTCGA+GGG | + | chr4.2:84875000-84875019 | None:intergenic | 40.0% |
| ! | TTGGTTGATGCTATCCACAA+TGG | - | chr4.2:84877937-84877956 | MS.gene70056:CDS | 40.0% |
| !! | ATTGAGTTGAGATTTGGACC+TGG | + | chr4.2:84875508-84875527 | None:intergenic | 40.0% |
| !! | CTGATTTTAGCCAGGAACTT+AGG | - | chr4.2:84875459-84875478 | MS.gene70056:CDS | 40.0% |
| !! | TGAAGGGGATTTTTGGATTG+TGG | + | chr4.2:84875066-84875085 | None:intergenic | 40.0% |
| !!! | ATTGGGTTGAAGGGGATTTT+TGG | + | chr4.2:84875073-84875092 | None:intergenic | 40.0% |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr4.2:84877594-84877613 | MS.gene70056:intron | 45.0% | |
| AAGGTCAGGTTAAAGTCACC+GGG | + | chr4.2:84875179-84875198 | None:intergenic | 45.0% | |
| AATAGTGACACTGGCATAGG+TGG | - | chr4.2:84875633-84875652 | MS.gene70056:intron | 45.0% | |
| AATGCTGGATATGCTGCTGA+TGG | - | chr4.2:84875257-84875276 | MS.gene70056:intron | 45.0% | |
| AGGAAATTGCTGGACCACTA+AGG | - | chr4.2:84877963-84877982 | MS.gene70056:CDS | 45.0% | |
| AGTTGCTTGAATGGGGATCA+AGG | - | chr4.2:84878254-84878273 | MS.gene70056:CDS | 45.0% | |
| ATAGGCTGTGGTCAACAACT+TGG | - | chr4.2:84876343-84876362 | MS.gene70056:CDS | 45.0% | |
| CAAGGTCAGGTTAAAGTCAC+CGG | + | chr4.2:84875180-84875199 | None:intergenic | 45.0% | |
| CTTGCTTTCTTTCAGTGCTG+TGG | + | chr4.2:84876402-84876421 | None:intergenic | 45.0% | |
| GAACCGAAGCTGAAAAACGT+CGG | - | chr4.2:84875218-84875237 | MS.gene70056:intron | 45.0% | |
| GAAGCAATTGAGACAGCAAC+AGG | - | chr4.2:84878169-84878188 | MS.gene70056:CDS | 45.0% | |
| GAGTAATCCAATGGGATTGG+AGG | - | chr4.2:84876604-84876623 | MS.gene70056:CDS | 45.0% | |
| GATAGGGTTGTGATTGGAGA+TGG | - | chr4.2:84876965-84876984 | MS.gene70056:intron | 45.0% | |
| GATGCTATCCACAATGGTCA+AGG | - | chr4.2:84877943-84877962 | MS.gene70056:CDS | 45.0% | |
| GATGGATATGCAAGGTCTAG+GGG | - | chr4.2:84875275-84875294 | MS.gene70056:intron | 45.0% | |
| GCTGATGCATACCTATTTGC+TGG | - | chr4.2:84876866-84876885 | MS.gene70056:CDS | 45.0% | |
| GCTTCATCTGAATCAACCCT+AGG | - | chr4.2:84875098-84875117 | MS.gene70056:CDS | 45.0% | |
| GGAATTAGGCCTTTAGCAGA+TGG | + | chr4.2:84876770-84876789 | None:intergenic | 45.0% | |
| GGAGACAAGGAAAATGGAAC+AGG | + | chr4.2:84876488-84876507 | None:intergenic | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr4.2:84877537-84877556 | MS.gene70056:intron | 45.0% | |
| GTCGTATCCTGAGTTTGTGT+CGG | + | chr4.2:84878055-84878074 | None:intergenic | 45.0% | |
| GTGAAACCAGTACTAGTAGC+CGG | - | chr4.2:84876665-84876684 | MS.gene70056:CDS | 45.0% | |
| GTTGCTTGAATGGGGATCAA+GGG | - | chr4.2:84878255-84878274 | MS.gene70056:CDS | 45.0% | |
| GTTTGTGATCCTCGGGAATT+AGG | + | chr4.2:84876784-84876803 | None:intergenic | 45.0% | |
| TCTCCAATCACAACCCTATC+AGG | + | chr4.2:84876965-84876984 | None:intergenic | 45.0% | |
| TCTGGAAACACCTAAGTTCC+TGG | + | chr4.2:84875472-84875491 | None:intergenic | 45.0% | |
| TGAACCTAGAGAGCCTTTGA+GGG | - | chr4.2:84877114-84877133 | MS.gene70056:intron | 45.0% | |
| TGCTACTCTTAGTTTCGGAC+CGG | + | chr4.2:84876687-84876706 | None:intergenic | 45.0% | |
| TGCTGTAACGAACTGAATGC+TGG | - | chr4.2:84875242-84875261 | MS.gene70056:intron | 45.0% | |
| TTAACCCTCAAAGGCTCTCT+AGG | + | chr4.2:84877121-84877140 | None:intergenic | 45.0% | |
| TTGTGCCGAGATTGTGGAAT+CGG | - | chr4.2:84876844-84876863 | MS.gene70056:CDS | 45.0% | |
| ! | ATCAGCCGATTCCACAATCT+CGG | + | chr4.2:84876852-84876871 | None:intergenic | 45.0% |
| ! | ATGCTGCTGATGGATATGCA+AGG | - | chr4.2:84875267-84875286 | MS.gene70056:intron | 45.0% |
| ! | CTGATGGATATGCAAGGTCT+AGG | - | chr4.2:84875273-84875292 | MS.gene70056:intron | 45.0% |
| ! | GGGTTGATTCAGATGAAGCT+AGG | + | chr4.2:84875097-84875116 | None:intergenic | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr4.2:84877600-84877619 | MS.gene70056:intron | 45.0% |
| ! | TGCATTTTGTGCCGAGATTG+TGG | - | chr4.2:84876838-84876857 | MS.gene70056:CDS | 45.0% |
| !! | AAGCTAGGGATTGGGTTGAA+GGG | + | chr4.2:84875082-84875101 | None:intergenic | 45.0% |
| !! | CAACCGACGTTTTTCAGCTT+CGG | + | chr4.2:84875224-84875243 | None:intergenic | 45.0% |
| !! | CATTGGTGATGGAAGTTTCC+AGG | - | chr4.2:84877611-84877630 | MS.gene70056:intron | 45.0% |
| !! | GAAACAGTGCCGTTTGATGA+AGG | + | chr4.2:84875044-84875063 | None:intergenic | 45.0% |
| !! | TGGTTTGCCTGATTTTAGCC+AGG | - | chr4.2:84875451-84875470 | MS.gene70056:CDS | 45.0% |
| !! | AAATAATATTATAATATGAT+TGG | - | chr4.2:84876003-84876022 | MS.gene70056:intron | 5.0% |
| !! | ATAATTTATATATTTGATTA+TGG | - | chr4.2:84878119-84878138 | MS.gene70056:CDS | 5.0% |
| !! | TATTATTGTAATATTATAAT+TGG | - | chr4.2:84875908-84875927 | MS.gene70056:intron | 5.0% |
| AAACCATGAGTCCCCTGTCT+CGG | + | chr4.2:84877197-84877216 | None:intergenic | 50.0% | |
| ACAGGTTCACGGCTGAAAGT+AGG | + | chr4.2:84876470-84876489 | None:intergenic | 50.0% | |
| ACTGCTGTTATTGCCGAGAC+AGG | - | chr4.2:84877181-84877200 | MS.gene70056:intron | 50.0% | |
| AGGTCAGGTTAAAGTCACCG+GGG | + | chr4.2:84875178-84875197 | None:intergenic | 50.0% | |
| ATATGCAAGGTCTAGGGGTG+TGG | - | chr4.2:84875280-84875299 | MS.gene70056:intron | 50.0% | |
| CAAGCAATCACTCGCTTCTC+CGG | + | chr4.2:84877591-84877610 | None:intergenic | 50.0% | |
| CAGCCTGATAGGGTTGTGAT+TGG | - | chr4.2:84876959-84876978 | MS.gene70056:intron | 50.0% | |
| CAGGTTCACGGCTGAAAGTA+GGG | + | chr4.2:84876469-84876488 | None:intergenic | 50.0% | |
| CCTGGTAGCAAGTAACAGTC+TGG | + | chr4.2:84875490-84875509 | None:intergenic | 50.0% | |
| CGGATATGCTCAAGCTGTTC+CGG | - | chr4.2:84877569-84877588 | MS.gene70056:intron | 50.0% | |
| CTGAACCTAGAGAGCCTTTG+AGG | - | chr4.2:84877113-84877132 | MS.gene70056:intron | 50.0% | |
| CTGCTGTTATTGCCGAGACA+GGG | - | chr4.2:84877182-84877201 | MS.gene70056:intron | 50.0% | |
| CTGTCCACATCTCAGCATTG+TGG | + | chr4.2:84877818-84877837 | None:intergenic | 50.0% | |
| GACAGCAACAGGACCAAAGA+AGG | - | chr4.2:84878180-84878199 | MS.gene70056:CDS | 50.0% | |
| GCCTTTAGCAGATGGCATGA+CGG | + | chr4.2:84876762-84876781 | None:intergenic | 50.0% | |
| GCTGAAAGTAGGGTGAGGAA+TGG | + | chr4.2:84876459-84876478 | None:intergenic | 50.0% | |
| GTGTCCACAATGCTGAGATG+TGG | - | chr4.2:84877811-84877830 | MS.gene70056:CDS | 50.0% | |
| TCCGTCATGCCATCTGCTAA+AGG | - | chr4.2:84876758-84876777 | MS.gene70056:intron | 50.0% | |
| TGCATGATTCGAGGGATCCT+AGG | + | chr4.2:84874992-84875011 | None:intergenic | 50.0% | |
| TGCTAAAGGCCTAATTCCCG+AGG | - | chr4.2:84876772-84876791 | MS.gene70056:intron | 50.0% | |
| TGCTGTTATTGCCGAGACAG+GGG | - | chr4.2:84877183-84877202 | MS.gene70056:intron | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+CGG | - | chr4.2:84877549-84877568 | MS.gene70056:intron | 50.0% | |
| ! | CACTTGCGAAGCGTCTTAAG+AGG | - | chr4.2:84877029-84877048 | MS.gene70056:intron | 50.0% |
| ! | CCAGACTGTTACTTGCTACC+AGG | - | chr4.2:84875487-84875506 | MS.gene70056:intron | 50.0% |
| ! | GCAGATGGCATGACGGAATA+TGG | + | chr4.2:84876755-84876774 | None:intergenic | 50.0% |
| ! | TATGCAAGGTCTAGGGGTGT+GGG | - | chr4.2:84875281-84875300 | MS.gene70056:intron | 50.0% |
| !! | AGCTAGGGATTGGGTTGAAG+GGG | + | chr4.2:84875081-84875100 | None:intergenic | 50.0% |
| !! | GAAGCTAGGGATTGGGTTGA+AGG | + | chr4.2:84875083-84875102 | None:intergenic | 50.0% |
| !! | TGAAGCACCGACACAAACTC+AGG | - | chr4.2:84878045-84878064 | MS.gene70056:CDS | 50.0% |
| AATGGGATTGGAGGCAGCAG+TGG | - | chr4.2:84876613-84876632 | MS.gene70056:CDS | 55.0% | |
| ACTGCTGCCTCCAATCCCAT+TGG | + | chr4.2:84876614-84876633 | None:intergenic | 55.0% | |
| CAGGTTAAAGTCACCGGGGA+CGG | + | chr4.2:84875174-84875193 | None:intergenic | 55.0% | |
| TCACGGCTGAAAGTAGGGTG+AGG | + | chr4.2:84876464-84876483 | None:intergenic | 55.0% | |
| TTCGGACCGGCTACTAGTAC+TGG | + | chr4.2:84876674-84876693 | None:intergenic | 55.0% | |
| ACCGACATCTTCACCGTCCC+CGG | - | chr4.2:84875158-84875177 | MS.gene70056:intron | 60.0% | |
| ACCGGGGACGGTGAAGATGT+CGG | + | chr4.2:84875162-84875181 | None:intergenic | 60.0% | |
| CTTCCACTAGTCGCCGTGCT+AGG | + | chr4.2:84875130-84875149 | None:intergenic | 60.0% | |
| CTTGCTCGACCACCTGATCG+CGG | - | chr4.2:84875196-84875215 | MS.gene70056:intron | 60.0% | |
| GCACGGCGACTAGTGGAAGT+CGG | - | chr4.2:84875131-84875150 | MS.gene70056:intron | 60.0% | |
| TCAGCTTCGGTTCCGCGATC+AGG | + | chr4.2:84875211-84875230 | None:intergenic | 60.0% | |
| TCAGGTGGTCGAGCAAGGTC+AGG | + | chr4.2:84875193-84875212 | None:intergenic | 60.0% | |
| TTGCCGAGACAGGGGACTCA+TGG | - | chr4.2:84877191-84877210 | MS.gene70056:intron | 60.0% | |
| CCACCTAGCACGGCGACTAG+TGG | - | chr4.2:84875124-84875143 | MS.gene70056:CDS | 65.0% | |
| CCACTAGTCGCCGTGCTAGG+TGG | + | chr4.2:84875127-84875146 | None:intergenic | 65.0% | |
| CCCTAGGCAGCCACCTAGCA+CGG | - | chr4.2:84875114-84875133 | MS.gene70056:CDS | 65.0% | |
| CCGTGCTAGGTGGCTGCCTA+GGG | + | chr4.2:84875117-84875136 | None:intergenic | 65.0% | |
| CGCGATCAGGTGGTCGAGCA+AGG | + | chr4.2:84875198-84875217 | None:intergenic | 65.0% | |
| GCTTCGGTTCCGCGATCAGG+TGG | + | chr4.2:84875208-84875227 | None:intergenic | 65.0% | |
| GGCAGCAGTGGAAGCAGCTG+CGG | - | chr4.2:84876625-84876644 | MS.gene70056:CDS | 65.0% | |
| GCCGTGCTAGGTGGCTGCCT+AGG | + | chr4.2:84875118-84875137 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 84874978 | 84878315 | 84874978 | ID=MS.gene70056 |
| chr4.2 | mRNA | 84874978 | 84878315 | 84874978 | ID=MS.gene70056.t1;Parent=MS.gene70056 |
| chr4.2 | exon | 84877785 | 84878315 | 84877785 | ID=MS.gene70056.t1.exon1;Parent=MS.gene70056.t1 |
| chr4.2 | CDS | 84877785 | 84878315 | 84877785 | ID=cds.MS.gene70056.t1;Parent=MS.gene70056.t1 |
| chr4.2 | exon | 84876783 | 84876946 | 84876783 | ID=MS.gene70056.t1.exon2;Parent=MS.gene70056.t1 |
| chr4.2 | CDS | 84876783 | 84876946 | 84876783 | ID=cds.MS.gene70056.t1;Parent=MS.gene70056.t1 |
| chr4.2 | exon | 84876042 | 84876692 | 84876042 | ID=MS.gene70056.t1.exon3;Parent=MS.gene70056.t1 |
| chr4.2 | CDS | 84876042 | 84876692 | 84876042 | ID=cds.MS.gene70056.t1;Parent=MS.gene70056.t1 |
| chr4.2 | exon | 84875661 | 84875778 | 84875661 | ID=MS.gene70056.t1.exon4;Parent=MS.gene70056.t1 |
| chr4.2 | CDS | 84875661 | 84875778 | 84875661 | ID=cds.MS.gene70056.t1;Parent=MS.gene70056.t1 |
| chr4.2 | exon | 84875309 | 84875497 | 84875309 | ID=MS.gene70056.t1.exon5;Parent=MS.gene70056.t1 |
| chr4.2 | CDS | 84875309 | 84875497 | 84875309 | ID=cds.MS.gene70056.t1;Parent=MS.gene70056.t1 |
| chr4.2 | exon | 84874978 | 84875148 | 84874978 | ID=MS.gene70056.t1.exon6;Parent=MS.gene70056.t1 |
| chr4.2 | CDS | 84874978 | 84875148 | 84874978 | ID=cds.MS.gene70056.t1;Parent=MS.gene70056.t1 |
| Gene Sequence |
| Protein sequence |
