Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70588.t1 | XP_013461053.1 | 99 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 3.30E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70588.t1 | Q86HG0 | 46.5 | 413 | 206 | 3 | 10 | 415 | 8 | 412 | 4.4e-87 | 323.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70588.t1 | A0A072UZU5 | 99.0 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 2.4e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70588 | MS.gene62173 | PPI |
| MS.gene70588 | MS.gene29519 | PPI |
| MS.gene70588 | MS.gene008143 | PPI |
| MS.gene70588 | MS.gene32515 | PPI |
| MS.gene70588 | MS.gene50130 | PPI |
| MS.gene70588 | MS.gene63291 | PPI |
| MS.gene70588 | MS.gene29520 | PPI |
| MS.gene63503 | MS.gene70588 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70588.t1 | MTR_3g078570 | 99.036 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 0.0 | 848 |
| MS.gene70588.t1 | MTR_3g078570 | 98.645 | 369 | 5 | 0 | 1 | 369 | 1 | 369 | 0.0 | 758 |
| MS.gene70588.t1 | MTR_6g008840 | 82.039 | 412 | 74 | 0 | 4 | 415 | 3 | 414 | 0.0 | 719 |
| MS.gene70588.t1 | MTR_4g071670 | 72.881 | 236 | 46 | 1 | 180 | 415 | 3 | 220 | 1.18e-122 | 355 |
| MS.gene70588.t1 | MTR_3g069070 | 31.750 | 400 | 225 | 7 | 10 | 409 | 3 | 354 | 2.25e-61 | 202 |
| MS.gene70588.t1 | MTR_5g080770 | 31.500 | 400 | 226 | 7 | 10 | 409 | 3 | 354 | 2.76e-61 | 202 |
| MS.gene70588.t1 | MTR_3g069070 | 30.564 | 337 | 189 | 5 | 73 | 409 | 4 | 295 | 7.80e-48 | 166 |
| MS.gene70588.t1 | MTR_4g133690 | 29.969 | 327 | 167 | 5 | 80 | 406 | 30 | 294 | 1.35e-42 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70588.t1 | AT1G74910 | 80.779 | 411 | 78 | 1 | 5 | 415 | 6 | 415 | 0.0 | 711 |
| MS.gene70588.t1 | AT1G74910 | 80.779 | 411 | 78 | 1 | 5 | 415 | 6 | 415 | 0.0 | 711 |
| MS.gene70588.t1 | AT2G04650 | 75.604 | 414 | 92 | 2 | 3 | 415 | 1 | 406 | 0.0 | 662 |
| MS.gene70588.t1 | AT1G74910 | 80.822 | 365 | 69 | 1 | 5 | 369 | 6 | 369 | 0.0 | 640 |
| MS.gene70588.t1 | AT2G04650 | 75.315 | 397 | 89 | 2 | 20 | 415 | 6 | 394 | 0.0 | 632 |
| MS.gene70588.t1 | AT2G39770 | 30.227 | 397 | 229 | 7 | 10 | 406 | 3 | 351 | 2.10e-57 | 192 |
| MS.gene70588.t1 | AT2G39770 | 30.227 | 397 | 229 | 7 | 10 | 406 | 3 | 351 | 2.10e-57 | 192 |
| MS.gene70588.t1 | AT2G39770 | 30.227 | 397 | 229 | 7 | 10 | 406 | 3 | 351 | 2.10e-57 | 192 |
| MS.gene70588.t1 | AT4G30570 | 31.300 | 377 | 212 | 7 | 30 | 405 | 1 | 331 | 4.10e-56 | 188 |
| MS.gene70588.t1 | AT3G55590 | 31.250 | 400 | 222 | 9 | 10 | 405 | 3 | 353 | 5.77e-55 | 186 |
Find 114 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGAGTCAGCCAGCGAATT+TGG | 0.144526 | 3.1:+64376154 | MS.gene70588:CDS |
| TCAACCTAACAGGGAGTTTA+AGG | 0.207561 | 3.1:-64375033 | None:intergenic |
| ATCTTGAACGCCGACATTTA+AGG | 0.216010 | 3.1:-64379640 | None:intergenic |
| CAGAAACATACAAAAGTTTC+AGG | 0.229413 | 3.1:-64376229 | None:intergenic |
| TACCATCTCCATTTGCTAAT+AGG | 0.285546 | 3.1:-64377798 | None:intergenic |
| CGGAGTCAGCCAGCGAATTT+GGG | 0.286759 | 3.1:+64376155 | MS.gene70588:CDS |
| GGAGATTACAATGCAAAGTT+TGG | 0.293510 | 3.1:+64379183 | MS.gene70588:CDS |
| AGATAAATCCGAGCTAAATT+AGG | 0.306173 | 3.1:-64374953 | None:intergenic |
| GGTCAGTATTTCAACCTAAC+AGG | 0.314409 | 3.1:-64375043 | None:intergenic |
| GCTAATGGAAAGAGTGGTTT+AGG | 0.338257 | 3.1:-64374798 | None:intergenic |
| TTAGGAATGTTGAATGATAA+TGG | 0.346235 | 3.1:-64374780 | None:intergenic |
| GATATCCTCTCACCTCTTGC+AGG | 0.350385 | 3.1:+64377578 | MS.gene70588:CDS |
| AGCCAGCGAATTTGGGGAAT+TGG | 0.355166 | 3.1:+64376162 | MS.gene70588:CDS |
| TATACACACCACAGTTTATA+AGG | 0.358814 | 3.1:-64376366 | None:intergenic |
| GAGATTACAATGCAAAGTTT+GGG | 0.364683 | 3.1:+64379184 | MS.gene70588:CDS |
| GTTGTTCTTCATGCAATTGT+TGG | 0.365369 | 3.1:+64378977 | MS.gene70588:CDS |
| TCAATGGCAGTAAAGATATC+TGG | 0.400157 | 3.1:-64376397 | None:intergenic |
| ACGACCTTAAACTCCCTGTT+AGG | 0.403314 | 3.1:+64375029 | MS.gene70588:CDS |
| AAACCACTCTTTCCATTAGC+TGG | 0.410401 | 3.1:+64374801 | MS.gene70588:CDS |
| AAGAAATTACCCAGCATTTG+TGG | 0.416326 | 3.1:-64375843 | None:intergenic |
| GGGAACAATACTGGTTGTTA+AGG | 0.416574 | 3.1:+64376038 | MS.gene70588:CDS |
| TGGACGGAATCGAGTGCCTT+TGG | 0.418152 | 3.1:-64374760 | None:intergenic |
| TGGGAACAAATCAAAACTCC+TGG | 0.423593 | 3.1:+64377638 | MS.gene70588:CDS |
| TGGACGATGGGCACGTGTCC+AGG | 0.425264 | 3.1:+64379015 | MS.gene70588:CDS |
| ACCATGGGTTGTCCAGCTAA+TGG | 0.441231 | 3.1:-64374813 | None:intergenic |
| ATTAAGAAAGCATGCATCAT+TGG | 0.441599 | 3.1:+64377820 | MS.gene70588:CDS |
| TTAGCTCGGATTTATCTCAT+TGG | 0.448196 | 3.1:+64374959 | MS.gene70588:CDS |
| ATATCTGCAAATGCTCGTAT+AGG | 0.449953 | 3.1:+64378817 | MS.gene70588:CDS |
| CCTTGATTTCAACATCATCA+AGG | 0.452782 | 3.1:-64378870 | None:intergenic |
| GAGTTTAAGGTCGTTGGAGA+TGG | 0.461406 | 3.1:-64375020 | None:intergenic |
| ATGATATATCAGATACTTGA+AGG | 0.463141 | 3.1:+64375608 | MS.gene70588:intron |
| TGGTGGCATGGGAACAATAC+TGG | 0.463716 | 3.1:+64376029 | MS.gene70588:CDS |
| CCTTGATGATGTTGAAATCA+AGG | 0.464913 | 3.1:+64378870 | MS.gene70588:CDS |
| CTCAGATTCCTAATTTAGCT+CGG | 0.466843 | 3.1:+64374945 | MS.gene70588:intron |
| GAGAGTTGTGGCGGTTATCA+TGG | 0.469516 | 3.1:+64374725 | MS.gene70588:CDS |
| GCGAAATTGCGAAAGATACA+AGG | 0.470146 | 3.1:-64377761 | None:intergenic |
| CAGAATGTCCATAAAATGTT+CGG | 0.473623 | 3.1:+64377738 | MS.gene70588:intron |
| AACAGGGAGTTTAAGGTCGT+TGG | 0.480946 | 3.1:-64375026 | None:intergenic |
| CTGCTGCATTGCTTCAAAGC+TGG | 0.482375 | 3.1:-64376644 | None:intergenic |
| AAGTTTGGGGTCACTATACT+TGG | 0.483146 | 3.1:+64379198 | MS.gene70588:CDS |
| AGATATCTTTACTGCCATTG+AGG | 0.489647 | 3.1:+64376399 | MS.gene70588:CDS |
| TGTCATCATGGAGGAGGATC+CGG | 0.492171 | 3.1:+64375677 | MS.gene70588:CDS |
| GATATCTTTACTGCCATTGA+GGG | 0.493889 | 3.1:+64376400 | MS.gene70588:CDS |
| CCAAATTCGCTGGCTGACTC+CGG | 0.503001 | 3.1:-64376154 | None:intergenic |
| TCCCCTCACCTATTAGCAAA+TGG | 0.503778 | 3.1:+64377790 | MS.gene70588:CDS |
| CTGAGAAGAAACACCCTCAA+TGG | 0.504733 | 3.1:-64376413 | None:intergenic |
| GTTGTGGCGGTTATCATGGT+TGG | 0.505551 | 3.1:+64374729 | MS.gene70588:CDS |
| TCCATTAGCTGGACAACCCA+TGG | 0.516294 | 3.1:+64374812 | MS.gene70588:CDS |
| CATTTAAGGTCTTGTGTGGA+AGG | 0.516494 | 3.1:-64379626 | None:intergenic |
| ATCTGTTGCCGTTGAGGATG+AGG | 0.520316 | 3.1:+64379581 | MS.gene70588:CDS |
| GACAAGCCTCATGGTTCTGC+CGG | 0.520726 | 3.1:+64375633 | MS.gene70588:CDS |
| TTCTTCATGCAATTGTTGGA+TGG | 0.524578 | 3.1:+64378981 | MS.gene70588:CDS |
| AACTGTTTCTTCCCTGCAAG+AGG | 0.524841 | 3.1:-64377590 | None:intergenic |
| GAAATCCTCCATTGGACGAT+GGG | 0.528328 | 3.1:+64379003 | MS.gene70588:CDS |
| TAACTTCAAAGATGTCATCA+TGG | 0.529752 | 3.1:+64375665 | MS.gene70588:CDS |
| TTACCCAGCATTTGTGGCAG+AGG | 0.533855 | 3.1:-64375837 | None:intergenic |
| CAGCTTTGAAGCAATGCAGC+AGG | 0.535500 | 3.1:+64376645 | MS.gene70588:CDS |
| TTTCCTCTGCCACAAATGCT+GGG | 0.535993 | 3.1:+64375834 | MS.gene70588:CDS |
| ACGGAATCGAGTGCCTTTGG+TGG | 0.538279 | 3.1:-64374757 | None:intergenic |
| GTGGCGGTTATCATGGTTGG+AGG | 0.543279 | 3.1:+64374732 | MS.gene70588:CDS |
| TACCAATTCCCCAAATTCGC+TGG | 0.543401 | 3.1:-64376164 | None:intergenic |
| TATAAACTAATTCAGGGTCG+TGG | 0.543960 | 3.1:+64379162 | MS.gene70588:intron |
| CTCCATTTGCTAATAGGTGA+GGG | 0.546056 | 3.1:-64377792 | None:intergenic |
| GCAAATGCTCGTATAGGAGC+TGG | 0.550558 | 3.1:+64378823 | MS.gene70588:CDS |
| AAGCCTCATGGTTCTGCCGG+TGG | 0.551198 | 3.1:+64375636 | MS.gene70588:CDS |
| CTCGTATAGGAGCTGGTGCA+AGG | 0.551410 | 3.1:+64378830 | MS.gene70588:CDS |
| TGCAAGAGTTCATTGCTGAC+AGG | 0.554241 | 3.1:-64376193 | None:intergenic |
| TGCCGTTGAGGATGAGGTAG+TGG | 0.555931 | 3.1:+64379587 | MS.gene70588:CDS |
| GACGGATGCACCTTTGCTGA+TGG | 0.556393 | 3.1:-64377859 | None:intergenic |
| GTTGGATGGAAATCCTCCAT+TGG | 0.560456 | 3.1:+64378995 | MS.gene70588:CDS |
| TTTGCAGATATTGATACGCC+AGG | 0.561974 | 3.1:-64378805 | None:intergenic |
| ACCGGCGAATTATGTCAGAT+TGG | 0.563640 | 3.1:+64377550 | MS.gene70588:CDS |
| GACACGTGCCCATCGTCCAA+TGG | 0.566978 | 3.1:-64379011 | None:intergenic |
| GTGGTTGAACAGATTGGTCC+TGG | 0.568136 | 3.1:+64378787 | MS.gene70588:intron |
| CAAAGATGTCATCATGGAGG+AGG | 0.569219 | 3.1:+64375671 | MS.gene70588:CDS |
| CGGAATCGAGTGCCTTTGGT+GGG | 0.578452 | 3.1:-64374756 | None:intergenic |
| GGGAACAAATCAAAACTCCT+GGG | 0.579375 | 3.1:+64377639 | MS.gene70588:CDS |
| GTTCTTCTGTAGGAGTCTAC+CGG | 0.579815 | 3.1:+64377532 | MS.gene70588:intron |
| AAGCAATGCAGCAGGACACA+AGG | 0.584010 | 3.1:+64376653 | MS.gene70588:CDS |
| GAATGTTGAATGATAATGGA+CGG | 0.587591 | 3.1:-64374776 | None:intergenic |
| AGGTGAATCTGTTGCCGTTG+AGG | 0.589560 | 3.1:+64379575 | MS.gene70588:intron |
| CACCTATTAGCAAATGGAGA+TGG | 0.589767 | 3.1:+64377796 | MS.gene70588:CDS |
| TTTGAAGTTATAAAGACCAC+CGG | 0.589860 | 3.1:-64375652 | None:intergenic |
| TCTCCATTTGCTAATAGGTG+AGG | 0.592639 | 3.1:-64377793 | None:intergenic |
| GGAAATCCTCCATTGGACGA+TGG | 0.596829 | 3.1:+64379002 | MS.gene70588:CDS |
| CCGACATTTAAGGTCTTGTG+TGG | 0.598385 | 3.1:-64379630 | None:intergenic |
| AAAGGTGCATCCGTCTGCAA+AGG | 0.606718 | 3.1:+64377867 | MS.gene70588:CDS |
| TGTCCAGCTAATGGAAAGAG+TGG | 0.609015 | 3.1:-64374804 | None:intergenic |
| ATATCCTCTCACCTCTTGCA+GGG | 0.611025 | 3.1:+64377579 | MS.gene70588:CDS |
| TTGAAGGAGGACAAGCCTCA+TGG | 0.616152 | 3.1:+64375624 | MS.gene70588:CDS |
| TCCAATCTGACATAATTCGC+CGG | 0.617056 | 3.1:-64377551 | None:intergenic |
| TCTTCCCTGCAAGAGGTGAG+AGG | 0.617718 | 3.1:-64377583 | None:intergenic |
| TGAATATTAACCTTTGCAGA+CGG | 0.619087 | 3.1:-64377877 | None:intergenic |
| AACCACTACCTCATCCTCAA+CGG | 0.619133 | 3.1:-64379589 | None:intergenic |
| GTTGTATATATATGAAACCA+TGG | 0.622029 | 3.1:+64377610 | MS.gene70588:CDS |
| AGAGATTGGATGATGAACCA+TGG | 0.625691 | 3.1:-64374829 | None:intergenic |
| TGCAGAAGAGAGAGTTGTGG+CGG | 0.627371 | 3.1:+64374716 | MS.gene70588:CDS |
| TTATATTCATCCATCAGCAA+AGG | 0.630315 | 3.1:+64377849 | MS.gene70588:CDS |
| GAGATTGGATGATGAACCAT+GGG | 0.630585 | 3.1:-64374828 | None:intergenic |
| TTGAGGGTGTTTCTTCTCAG+CGG | 0.638549 | 3.1:+64376416 | MS.gene70588:CDS |
| CCACACAAGACCTTAAATGT+CGG | 0.639985 | 3.1:+64379630 | MS.gene70588:CDS |
| AGATTACAATGCAAAGTTTG+GGG | 0.643007 | 3.1:+64379185 | MS.gene70588:CDS |
| TCTTCTCAGCGGAAAGACAG+AGG | 0.647631 | 3.1:+64376427 | MS.gene70588:CDS |
| ACGTGCCCATCGTCCAATGG+AGG | 0.649101 | 3.1:-64379008 | None:intergenic |
| TCCATTTGCTAATAGGTGAG+GGG | 0.656945 | 3.1:-64377791 | None:intergenic |
| ATGGTTGGAGGACCCACCAA+AGG | 0.659804 | 3.1:+64374744 | MS.gene70588:CDS |
| GGAGTCAGCCAGCGAATTTG+GGG | 0.671049 | 3.1:+64376156 | MS.gene70588:CDS |
| GTCAGTATTTCAACCTAACA+GGG | 0.681516 | 3.1:-64375042 | None:intergenic |
| CTAATAGGTGAGGGGATGTG+TGG | 0.681648 | 3.1:-64377783 | None:intergenic |
| GTTAGTGACCTTATAAACTG+TGG | 0.686135 | 3.1:+64376358 | MS.gene70588:CDS |
| ATATATCAGATACTTGAAGG+AGG | 0.711744 | 3.1:+64375611 | MS.gene70588:intron |
| CTTCAAAGATGTCATCATGG+AGG | 0.716377 | 3.1:+64375668 | MS.gene70588:CDS |
| AATTGCAGAAGAGAGAGTTG+TGG | 0.716827 | 3.1:+64374713 | MS.gene70588:CDS |
| AGACCACCGGCAGAACCATG+AGG | 0.719747 | 3.1:-64375639 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAGATATAAAATAATTA+TGG | - | chr3.1:64379375-64379394 | None:intergenic | 10.0% |
| !! | ACAAGATATAAAATAATTAT+GGG | - | chr3.1:64379374-64379393 | None:intergenic | 10.0% |
| !! | TAAAATATGAAGAAATTAAA+AGG | - | chr3.1:64375715-64375734 | None:intergenic | 10.0% |
| !!! | ATGTAATTTTATAATTTAAG+TGG | - | chr3.1:64378237-64378256 | None:intergenic | 10.0% |
| !!! | ATTAACTAAGAATAATTTTT+GGG | + | chr3.1:64376587-64376606 | MS.gene70588:intron | 10.0% |
| !!! | TATTAACTAAGAATAATTTT+TGG | + | chr3.1:64376586-64376605 | MS.gene70588:intron | 10.0% |
| !!! | TGTAATTTTATAATTTAAGT+GGG | - | chr3.1:64378236-64378255 | None:intergenic | 10.0% |
| !! | GTTAAGATGTTATTATATTT+AGG | - | chr3.1:64379281-64379300 | None:intergenic | 15.0% |
| !! | TAAAAGGATTATATAATAAC+CGG | - | chr3.1:64375699-64375718 | None:intergenic | 15.0% |
| !!! | ATTCAGTATTGAAATAATTA+AGG | - | chr3.1:64379349-64379368 | None:intergenic | 15.0% |
| !!! | GTAATTTTATAATTTAAGTG+GGG | - | chr3.1:64378235-64378254 | None:intergenic | 15.0% |
| !!! | TAATTTTATAATTTAAGTGG+GGG | - | chr3.1:64378234-64378253 | None:intergenic | 15.0% |
| !!! | TATTTGGAATAAAATCTTTA+GGG | + | chr3.1:64377164-64377183 | MS.gene70588:intron | 15.0% |
| !!! | TCATATTTTGTATAATTGTA+TGG | + | chr3.1:64375769-64375788 | MS.gene70588:intron | 15.0% |
| !!! | TTTTAAATATTTCATCTTAC+AGG | + | chr3.1:64378946-64378965 | MS.gene70588:intron | 15.0% |
| !! | AATAAAAGGAATGTAAAGAT+AGG | - | chr3.1:64379121-64379140 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | - | chr3.1:64378500-64378519 | None:intergenic | 20.0% |
| !! | AATAAAATTTCAGAAAGTTC+TGG | - | chr3.1:64376728-64376747 | None:intergenic | 20.0% |
| !! | AGATGTTATTATATTTAGGA+CGG | - | chr3.1:64379277-64379296 | None:intergenic | 20.0% |
| !! | ATTCTTAGTTAATATACATG+AGG | - | chr3.1:64376580-64376599 | None:intergenic | 20.0% |
| !! | CATTAATTTATGAATGTTAG+TGG | - | chr3.1:64379076-64379095 | None:intergenic | 20.0% |
| !! | GAAATGTATAAACTAATTCA+GGG | + | chr3.1:64379156-64379175 | MS.gene70588:intron | 20.0% |
| !! | TAAGTGATTATACAAATTGA+TGG | - | chr3.1:64378346-64378365 | None:intergenic | 20.0% |
| !! | TGAAATGTATAAACTAATTC+AGG | + | chr3.1:64379155-64379174 | MS.gene70588:intron | 20.0% |
| !! | TGAGTTTATATATTTAGAGA+CGG | + | chr3.1:64379476-64379495 | MS.gene70588:intron | 20.0% |
| !! | TGTTATGAGTAAGAAATATT+AGG | - | chr3.1:64377982-64378001 | None:intergenic | 20.0% |
| !!! | AAATGCGTTTTTATTTTACT+CGG | + | chr3.1:64378586-64378605 | MS.gene70588:intron | 20.0% |
| !!! | CATTTAGATTTTCTTTTTCT+CGG | - | chr3.1:64378733-64378752 | None:intergenic | 20.0% |
| !!! | GTATTTGGAATAAAATCTTT+AGG | + | chr3.1:64377163-64377182 | MS.gene70588:intron | 20.0% |
| !!! | TAAGTTTAGAACATTTAACT+TGG | - | chr3.1:64377345-64377364 | None:intergenic | 20.0% |
| !!! | TGGGTATTATAATTTTTTTG+AGG | - | chr3.1:64378211-64378230 | None:intergenic | 20.0% |
| !!! | TTCGGTTCTATTTTTAAAAT+AGG | - | chr3.1:64378613-64378632 | None:intergenic | 20.0% |
| !!! | TTGAAATGCATAAACATTTT+TGG | + | chr3.1:64378915-64378934 | MS.gene70588:intron | 20.0% |
| ! | ACTTAATCAGTCAATTTGAA+AGG | + | chr3.1:64378361-64378380 | MS.gene70588:intron | 25.0% |
| ! | AGCCAATAAGAAAATAAGAT+CGG | + | chr3.1:64377084-64377103 | MS.gene70588:intron | 25.0% |
| ! | ATGATATATCAGATACTTGA+AGG | + | chr3.1:64375608-64375627 | MS.gene70588:intron | 25.0% |
| ! | CAAGTATCTGATATATCATA+GGG | - | chr3.1:64375607-64375626 | None:intergenic | 25.0% |
| ! | GAAAACAAGGATAGTTTATA+TGG | + | chr3.1:64377485-64377504 | MS.gene70588:intron | 25.0% |
| ! | GTCACTATTAAAAAACAATG+TGG | - | chr3.1:64376076-64376095 | None:intergenic | 25.0% |
| ! | GTTGTATATATATGAAACCA+TGG | + | chr3.1:64377610-64377629 | MS.gene70588:CDS | 25.0% |
| ! | TAATTTCTGCTGGATATATA+AGG | + | chr3.1:64376531-64376550 | MS.gene70588:intron | 25.0% |
| ! | TATAAGGAATTGTAGATAAC+TGG | + | chr3.1:64376547-64376566 | MS.gene70588:intron | 25.0% |
| ! | TATATGATTGTCAACGATAT+TGG | + | chr3.1:64376968-64376987 | MS.gene70588:intron | 25.0% |
| ! | TATGAAGATAACAGTAAGAA+AGG | - | chr3.1:64379226-64379245 | None:intergenic | 25.0% |
| ! | TCAAGTATCTGATATATCAT+AGG | - | chr3.1:64375608-64375627 | None:intergenic | 25.0% |
| ! | TCATAACAACTTAATGTTAC+TGG | + | chr3.1:64377994-64378013 | MS.gene70588:intron | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | - | chr3.1:64375067-64375086 | None:intergenic | 25.0% |
| ! | TTAATTGATGCATATCATCA+GGG | + | chr3.1:64378129-64378148 | MS.gene70588:intron | 25.0% |
| ! | TTAGGAATGTTGAATGATAA+TGG | - | chr3.1:64374783-64374802 | None:intergenic | 25.0% |
| ! | TTCCTTAATAGTGCTTATAT+GGG | - | chr3.1:64377267-64377286 | None:intergenic | 25.0% |
| ! | TTTAATTGATGCATATCATC+AGG | + | chr3.1:64378128-64378147 | MS.gene70588:intron | 25.0% |
| !! | AAATTAGTCGTCTTTTCTAT+AGG | + | chr3.1:64379302-64379321 | MS.gene70588:intron | 25.0% |
| !! | ATATGAAACCATGGATTTTT+GGG | + | chr3.1:64377619-64377638 | MS.gene70588:CDS | 25.0% |
| !! | ATGTTCAATTTAATTTCTGC+TGG | + | chr3.1:64376521-64376540 | MS.gene70588:intron | 25.0% |
| !! | ATTTTATATGCTACTAGTAC+TGG | + | chr3.1:64375729-64375748 | MS.gene70588:intron | 25.0% |
| !! | CAAAATAAAGCATTTAAGCA+TGG | + | chr3.1:64377022-64377041 | MS.gene70588:intron | 25.0% |
| !! | GAGGTAATATTGTTATTATG+GGG | + | chr3.1:64379498-64379517 | MS.gene70588:intron | 25.0% |
| !! | GGAGGTAATATTGTTATTAT+GGG | + | chr3.1:64379497-64379516 | MS.gene70588:intron | 25.0% |
| !! | TAATATTGTTATTATGGGGA+AGG | + | chr3.1:64379502-64379521 | MS.gene70588:intron | 25.0% |
| !! | TATATGAAACCATGGATTTT+TGG | + | chr3.1:64377618-64377637 | MS.gene70588:CDS | 25.0% |
| !!! | AATGCGTTTTTATTTTACTC+GGG | + | chr3.1:64378587-64378606 | MS.gene70588:intron | 25.0% |
| !!! | ATAAGTTTTATGAGACTGTT+TGG | + | chr3.1:64375355-64375374 | MS.gene70588:intron | 25.0% |
| !!! | GGCTTTTAACTAATCATTTT+GGG | - | chr3.1:64377068-64377087 | None:intergenic | 25.0% |
| !!! | TAAGTTTTATGAGACTGTTT+GGG | + | chr3.1:64375356-64375375 | MS.gene70588:intron | 25.0% |
| !!! | TCAGCTAAATTTTGAAAAAC+AGG | - | chr3.1:64376705-64376724 | None:intergenic | 25.0% |
| !!! | TGGCTTTTAACTAATCATTT+TGG | - | chr3.1:64377069-64377088 | None:intergenic | 25.0% |
| AACCCATATAAGCACTATTA+AGG | + | chr3.1:64377262-64377281 | MS.gene70588:intron | 30.0% | |
| ACACAAGAATAGATGGTATT+TGG | + | chr3.1:64377148-64377167 | MS.gene70588:intron | 30.0% | |
| ACAGATGCTCACAAAAAATA+TGG | + | chr3.1:64376009-64376028 | MS.gene70588:intron | 30.0% | |
| ACATAAGTTTGTGAGATTCT+CGG | + | chr3.1:64375099-64375118 | MS.gene70588:intron | 30.0% | |
| ACTATTAAGGAAGGATAGAA+TGG | + | chr3.1:64377275-64377294 | MS.gene70588:intron | 30.0% | |
| AGAGTAGAAAAATAGTAGTC+CGG | - | chr3.1:64375532-64375551 | None:intergenic | 30.0% | |
| AGATAAATCCGAGCTAAATT+AGG | - | chr3.1:64374956-64374975 | None:intergenic | 30.0% | |
| AGATTACAATGCAAAGTTTG+GGG | + | chr3.1:64379185-64379204 | MS.gene70588:CDS | 30.0% | |
| ATATATCAGATACTTGAAGG+AGG | + | chr3.1:64375611-64375630 | MS.gene70588:intron | 30.0% | |
| ATTCAAGACATAACATATGC+AGG | - | chr3.1:64376257-64376276 | None:intergenic | 30.0% | |
| CAGAAACATACAAAAGTTTC+AGG | - | chr3.1:64376232-64376251 | None:intergenic | 30.0% | |
| CAGAATGTCCATAAAATGTT+CGG | + | chr3.1:64377738-64377757 | MS.gene70588:intron | 30.0% | |
| CATATAAGCACTATTAAGGA+AGG | + | chr3.1:64377266-64377285 | MS.gene70588:intron | 30.0% | |
| CTTCCTTAATAGTGCTTATA+TGG | - | chr3.1:64377268-64377287 | None:intergenic | 30.0% | |
| GAGAAAAGGATCAAACAAAT+TGG | - | chr3.1:64376116-64376135 | None:intergenic | 30.0% | |
| GAGATTACAATGCAAAGTTT+GGG | + | chr3.1:64379184-64379203 | MS.gene70588:CDS | 30.0% | |
| GCAAACAAATTGCGAATAAA+AGG | - | chr3.1:64379135-64379154 | None:intergenic | 30.0% | |
| GGTTGTTAAGGTTAGAAATT+GGG | + | chr3.1:64376050-64376069 | MS.gene70588:intron | 30.0% | |
| GTGATTATACAAATTGATGG+TGG | - | chr3.1:64378343-64378362 | None:intergenic | 30.0% | |
| GTTTACATAAGTGTTTGTCA+TGG | + | chr3.1:64375258-64375277 | MS.gene70588:intron | 30.0% | |
| GTTTATATATTTAGAGACGG+AGG | + | chr3.1:64379479-64379498 | MS.gene70588:intron | 30.0% | |
| TAACTTCAAAGATGTCATCA+TGG | + | chr3.1:64375665-64375684 | MS.gene70588:CDS | 30.0% | |
| TATACACACCACAGTTTATA+AGG | - | chr3.1:64376369-64376388 | None:intergenic | 30.0% | |
| TATGTAATTGGAAAAGACTC+TGG | + | chr3.1:64377430-64377449 | MS.gene70588:intron | 30.0% | |
| TGAATATTAACCTTTGCAGA+CGG | - | chr3.1:64377880-64377899 | None:intergenic | 30.0% | |
| TGGTTGTTAAGGTTAGAAAT+TGG | + | chr3.1:64376049-64376068 | MS.gene70588:intron | 30.0% | |
| TTAAAATTACCAAACTTGCC+TGG | - | chr3.1:64379036-64379055 | None:intergenic | 30.0% | |
| TTATATTCATCCATCAGCAA+AGG | + | chr3.1:64377849-64377868 | MS.gene70588:CDS | 30.0% | |
| TTTATAATTTAAGTGGGGGT+GGG | - | chr3.1:64378230-64378249 | None:intergenic | 30.0% | |
| ! | ACTTAGAATTGATTCATAGC+AGG | + | chr3.1:64377360-64377379 | MS.gene70588:intron | 30.0% |
| ! | ATTAAGAAAGCATGCATCAT+TGG | + | chr3.1:64377820-64377839 | MS.gene70588:CDS | 30.0% |
| ! | CGGAGGTAATATTGTTATTA+TGG | + | chr3.1:64379496-64379515 | MS.gene70588:intron | 30.0% |
| ! | TCTATCAACTTTTCTATAGC+AGG | - | chr3.1:64377207-64377226 | None:intergenic | 30.0% |
| ! | TGCTGTTTGATCTATGTAAT+TGG | + | chr3.1:64377418-64377437 | MS.gene70588:intron | 30.0% |
| ! | TGTTATTATATTTAGGACGG+AGG | - | chr3.1:64379274-64379293 | None:intergenic | 30.0% |
| ! | TTTGAAGTTATAAAGACCAC+CGG | - | chr3.1:64375655-64375674 | None:intergenic | 30.0% |
| ! | TTTTATAATTTAAGTGGGGG+TGG | - | chr3.1:64378231-64378250 | None:intergenic | 30.0% |
| !! | GAATGTTGAATGATAATGGA+CGG | - | chr3.1:64374779-64374798 | None:intergenic | 30.0% |
| !! | TCAAATAAGTTGATCCAAAC+CGG | - | chr3.1:64375329-64375348 | None:intergenic | 30.0% |
| !!! | CACCGATCTTATTTTCTTAT+TGG | - | chr3.1:64377089-64377108 | None:intergenic | 30.0% |
| AAAATAAGTGCGTGCATACA+TGG | - | chr3.1:64376895-64376914 | None:intergenic | 35.0% | |
| AACCTCCTATTTCATAGGAA+CGG | + | chr3.1:64378631-64378650 | MS.gene70588:intron | 35.0% | |
| AAGAAATTACCCAGCATTTG+TGG | - | chr3.1:64375846-64375865 | None:intergenic | 35.0% | |
| AATACGACAATCACACATGA+AGG | - | chr3.1:64377702-64377721 | None:intergenic | 35.0% | |
| ACCTTCAAAAAGAGGAGAAA+AGG | - | chr3.1:64376130-64376149 | None:intergenic | 35.0% | |
| AGATATCTTTACTGCCATTG+AGG | + | chr3.1:64376399-64376418 | MS.gene70588:CDS | 35.0% | |
| AGATGATGAGAATGCTATGA+TGG | + | chr3.1:64377115-64377134 | MS.gene70588:intron | 35.0% | |
| AGGCAAGTCTACACATTAAT+TGG | + | chr3.1:64378890-64378909 | MS.gene70588:intron | 35.0% | |
| AGGCATATCAAGACTGAAAT+AGG | - | chr3.1:64377962-64377981 | None:intergenic | 35.0% | |
| ATAAGTTTGTGAGATTCTCG+GGG | + | chr3.1:64375101-64375120 | MS.gene70588:intron | 35.0% | |
| ATATCTGCAAATGCTCGTAT+AGG | + | chr3.1:64378817-64378836 | MS.gene70588:CDS | 35.0% | |
| ATTTAAACTCCCTGTTAGGT+TGG | + | chr3.1:64375295-64375314 | MS.gene70588:intron | 35.0% | |
| CACAAAAAATATGGTGGCAT+GGG | + | chr3.1:64376018-64376037 | MS.gene70588:CDS | 35.0% | |
| CAGATATGAACAATCGAGAT+CGG | - | chr3.1:64376859-64376878 | None:intergenic | 35.0% | |
| CATAAGTTTGTGAGATTCTC+GGG | + | chr3.1:64375100-64375119 | MS.gene70588:intron | 35.0% | |
| CCTTGATTTCAACATCATCA+AGG | - | chr3.1:64378873-64378892 | None:intergenic | 35.0% | |
| CTCAGATTCCTAATTTAGCT+CGG | + | chr3.1:64374945-64374964 | MS.gene70588:intron | 35.0% | |
| GAAGATAATACATCAGTGAG+AGG | + | chr3.1:64377309-64377328 | MS.gene70588:intron | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | - | chr3.1:64378483-64378502 | None:intergenic | 35.0% | |
| GAGTAGAAAAATAGTAGTCC+GGG | - | chr3.1:64375531-64375550 | None:intergenic | 35.0% | |
| GATAATATTCAAGCTTACCC+AGG | - | chr3.1:64377659-64377678 | None:intergenic | 35.0% | |
| GATAGAATCTTGCCTTAAGT+GGG | + | chr3.1:64377221-64377240 | MS.gene70588:intron | 35.0% | |
| GATATCTTTACTGCCATTGA+GGG | + | chr3.1:64376400-64376419 | MS.gene70588:CDS | 35.0% | |
| GATGCTCACAAAAAATATGG+TGG | + | chr3.1:64376012-64376031 | MS.gene70588:intron | 35.0% | |
| GGAGATTACAATGCAAAGTT+TGG | + | chr3.1:64379183-64379202 | MS.gene70588:CDS | 35.0% | |
| GGATAGAATGGTAGATAGAA+TGG | + | chr3.1:64377287-64377306 | MS.gene70588:intron | 35.0% | |
| GGCATATCAAGACTGAAATA+GGG | - | chr3.1:64377961-64377980 | None:intergenic | 35.0% | |
| GTCAGTATTTCAACCTAACA+GGG | - | chr3.1:64375045-64375064 | None:intergenic | 35.0% | |
| GTTAGTGACCTTATAAACTG+TGG | + | chr3.1:64376358-64376377 | MS.gene70588:CDS | 35.0% | |
| GTTGTTCTTCATGCAATTGT+TGG | + | chr3.1:64378977-64378996 | MS.gene70588:CDS | 35.0% | |
| TAAGCGTTTATCGATGTTTG+TGG | + | chr3.1:64375474-64375493 | MS.gene70588:intron | 35.0% | |
| TATAAACTAATTCAGGGTCG+TGG | + | chr3.1:64379162-64379181 | MS.gene70588:intron | 35.0% | |
| TCAATGGCAGTAAAGATATC+TGG | - | chr3.1:64376400-64376419 | None:intergenic | 35.0% | |
| TCACAAAAAATATGGTGGCA+TGG | + | chr3.1:64376017-64376036 | MS.gene70588:CDS | 35.0% | |
| TGAGATTTAAACTCCCTGTT+AGG | + | chr3.1:64375291-64375310 | MS.gene70588:intron | 35.0% | |
| TGATAGAATCTTGCCTTAAG+TGG | + | chr3.1:64377220-64377239 | MS.gene70588:intron | 35.0% | |
| TGTTGTCACACAAGAATAGA+TGG | + | chr3.1:64377141-64377160 | MS.gene70588:intron | 35.0% | |
| TTAGCTCGGATTTATCTCAT+TGG | + | chr3.1:64374959-64374978 | MS.gene70588:CDS | 35.0% | |
| TTCCTATGAAATAGGAGGTT+CGG | - | chr3.1:64378631-64378650 | None:intergenic | 35.0% | |
| TTCTTCATGCAATTGTTGGA+TGG | + | chr3.1:64378981-64379000 | MS.gene70588:CDS | 35.0% | |
| ! | AATGTTACTGGTTGTACTTC+TGG | + | chr3.1:64378006-64378025 | MS.gene70588:intron | 35.0% |
| ! | ATACAAGGCCGAACATTTTA+TGG | - | chr3.1:64377749-64377768 | None:intergenic | 35.0% |
| ! | ATTATATTTAGGACGGAGGT+AGG | - | chr3.1:64379270-64379289 | None:intergenic | 35.0% |
| ! | ATTCTGAAGAGTTCTTCTGT+AGG | + | chr3.1:64377522-64377541 | MS.gene70588:intron | 35.0% |
| ! | CAACTTGACTTTTGCTAATG+TGG | + | chr3.1:64378768-64378787 | MS.gene70588:intron | 35.0% |
| ! | GATTTGTTCCCAAAAATCCA+TGG | - | chr3.1:64377630-64377649 | None:intergenic | 35.0% |
| ! | TACCATCTCCATTTGCTAAT+AGG | - | chr3.1:64377801-64377820 | None:intergenic | 35.0% |
| ! | TCCTTTTCTCCTCTTTTTGA+AGG | + | chr3.1:64376126-64376145 | MS.gene70588:intron | 35.0% |
| !! | ATTTACCTAACGGTGTCATT+TGG | - | chr3.1:64378473-64378492 | None:intergenic | 35.0% |
| !! | CCTTGATGATGTTGAAATCA+AGG | + | chr3.1:64378870-64378889 | MS.gene70588:CDS | 35.0% |
| !! | TACTAGTACTGGTATGTTGA+TGG | + | chr3.1:64375740-64375759 | MS.gene70588:intron | 35.0% |
| !! | TAGACTCTAGTTCTACTTTC+TGG | + | chr3.1:64378295-64378314 | MS.gene70588:intron | 35.0% |
| AAACCACTCTTTCCATTAGC+TGG | + | chr3.1:64374801-64374820 | MS.gene70588:CDS | 40.0% | |
| AACCGAACCTCCTATTTCAT+AGG | + | chr3.1:64378626-64378645 | MS.gene70588:intron | 40.0% | |
| AATTGCAGAAGAGAGAGTTG+TGG | + | chr3.1:64374713-64374732 | MS.gene70588:CDS | 40.0% | |
| ACATTCCAAATGACACCGTT+AGG | + | chr3.1:64378465-64378484 | MS.gene70588:intron | 40.0% | |
| AGAGATTGGATGATGAACCA+TGG | - | chr3.1:64374832-64374851 | None:intergenic | 40.0% | |
| ATAAGACAGTAAACAGCAGC+AGG | - | chr3.1:64376315-64376334 | None:intergenic | 40.0% | |
| ATACATCAGTGAGAGGTAGA+AGG | + | chr3.1:64377316-64377335 | MS.gene70588:intron | 40.0% | |
| ATCTTGAACGCCGACATTTA+AGG | - | chr3.1:64379643-64379662 | None:intergenic | 40.0% | |
| CAATCGAGATCGGATTAAGA+AGG | - | chr3.1:64376849-64376868 | None:intergenic | 40.0% | |
| CACCTATTAGCAAATGGAGA+TGG | + | chr3.1:64377796-64377815 | MS.gene70588:CDS | 40.0% | |
| CCACACAAGACCTTAAATGT+CGG | + | chr3.1:64379630-64379649 | MS.gene70588:CDS | 40.0% | |
| CGCTATACAGTGTGAAAACA+AGG | + | chr3.1:64377472-64377491 | MS.gene70588:intron | 40.0% | |
| CTCTCATAACACAGATCAAG+TGG | - | chr3.1:64378093-64378112 | None:intergenic | 40.0% | |
| CTTCAAAGATGTCATCATGG+AGG | + | chr3.1:64375668-64375687 | MS.gene70588:CDS | 40.0% | |
| GAAAAATAGTAGTCCGGGTT+CGG | - | chr3.1:64375526-64375545 | None:intergenic | 40.0% | |
| GAGAACCTACATGATATGCA+GGG | - | chr3.1:64378657-64378676 | None:intergenic | 40.0% | |
| GAGATTGGATGATGAACCAT+GGG | - | chr3.1:64374831-64374850 | None:intergenic | 40.0% | |
| GCGAAATTGCGAAAGATACA+AGG | - | chr3.1:64377764-64377783 | None:intergenic | 40.0% | |
| GCTAATGGAAAGAGTGGTTT+AGG | - | chr3.1:64374801-64374820 | None:intergenic | 40.0% | |
| GCTAATGTGGTTGAACAGAT+TGG | + | chr3.1:64378781-64378800 | MS.gene70588:intron | 40.0% | |
| GGGAACAAATCAAAACTCCT+GGG | + | chr3.1:64377639-64377658 | MS.gene70588:CDS | 40.0% | |
| GGTCAGTATTTCAACCTAAC+AGG | - | chr3.1:64375046-64375065 | None:intergenic | 40.0% | |
| GGTTGAAATACTGACCTGTT+TGG | + | chr3.1:64375050-64375069 | MS.gene70588:intron | 40.0% | |
| GTAATTGGAAAAGACTCTGG+TGG | + | chr3.1:64377433-64377452 | MS.gene70588:intron | 40.0% | |
| TAAGACAGTAAACAGCAGCA+GGG | - | chr3.1:64376314-64376333 | None:intergenic | 40.0% | |
| TCAACCTAACAGGGAGTTTA+AGG | - | chr3.1:64375036-64375055 | None:intergenic | 40.0% | |
| TCACATGTACTACCCACTTA+AGG | - | chr3.1:64377236-64377255 | None:intergenic | 40.0% | |
| TCCAATCTGACATAATTCGC+CGG | - | chr3.1:64377554-64377573 | None:intergenic | 40.0% | |
| TGATTCATAGCAGGAGACTA+TGG | + | chr3.1:64377369-64377388 | MS.gene70588:intron | 40.0% | |
| TGGGAACAAATCAAAACTCC+TGG | + | chr3.1:64377638-64377657 | MS.gene70588:CDS | 40.0% | |
| TTAAGTGGGTAGTACATGTG+AGG | + | chr3.1:64377235-64377254 | MS.gene70588:intron | 40.0% | |
| TTTGCAGATATTGATACGCC+AGG | - | chr3.1:64378808-64378827 | None:intergenic | 40.0% | |
| ! | AAGTTTGGGGTCACTATACT+TGG | + | chr3.1:64379198-64379217 | MS.gene70588:CDS | 40.0% |
| ! | ACTTTTCGACAAGCAGAGAT+TGG | - | chr3.1:64374846-64374865 | None:intergenic | 40.0% |
| ! | ATATGTTGTTTAGCCGAACC+CGG | + | chr3.1:64375510-64375529 | MS.gene70588:intron | 40.0% |
| ! | CATTTAAGGTCTTGTGTGGA+AGG | - | chr3.1:64379629-64379648 | None:intergenic | 40.0% |
| ! | CTCCATTTGCTAATAGGTGA+GGG | - | chr3.1:64377795-64377814 | None:intergenic | 40.0% |
| ! | GGGAACAATACTGGTTGTTA+AGG | + | chr3.1:64376038-64376057 | MS.gene70588:CDS | 40.0% |
| ! | GGGGAAGCATAAGAATAAGA+AGG | - | chr3.1:64375566-64375585 | None:intergenic | 40.0% |
| ! | TCCATTTGCTAATAGGTGAG+GGG | - | chr3.1:64377794-64377813 | None:intergenic | 40.0% |
| ! | TCTCCATTTGCTAATAGGTG+AGG | - | chr3.1:64377796-64377815 | None:intergenic | 40.0% |
| !! | CCTCTTTTTGAAGGTTTCTC+CGG | + | chr3.1:64376135-64376154 | MS.gene70588:intron | 40.0% |
| !! | TATGGCCTTGTTTCATAGCA+GGG | + | chr3.1:64377387-64377406 | MS.gene70588:intron | 40.0% |
| !!! | TTTTTGAGGCCCATCGTTTT+TGG | - | chr3.1:64378197-64378216 | None:intergenic | 40.0% |
| AACCACTACCTCATCCTCAA+CGG | - | chr3.1:64379592-64379611 | None:intergenic | 45.0% | |
| AAGGTCACTAACCTGCAATC+AGG | - | chr3.1:64376350-64376369 | None:intergenic | 45.0% | |
| ACCGGCGAATTATGTCAGAT+TGG | + | chr3.1:64377550-64377569 | MS.gene70588:CDS | 45.0% | |
| ACGACCTTAAACTCCCTGTT+AGG | + | chr3.1:64375029-64375048 | MS.gene70588:CDS | 45.0% | |
| ATATCCTCTCACCTCTTGCA+GGG | + | chr3.1:64377579-64377598 | MS.gene70588:CDS | 45.0% | |
| CAAAGATGTCATCATGGAGG+AGG | + | chr3.1:64375671-64375690 | MS.gene70588:CDS | 45.0% | |
| CAATGCCCTGCTATGAAACA+AGG | - | chr3.1:64377395-64377414 | None:intergenic | 45.0% | |
| CATAGGGAACAAGACAAGTG+AGG | - | chr3.1:64375591-64375610 | None:intergenic | 45.0% | |
| CCGGAGAAACCTTCAAAAAG+AGG | - | chr3.1:64376138-64376157 | None:intergenic | 45.0% | |
| CTGAGAAGAAACACCCTCAA+TGG | - | chr3.1:64376416-64376435 | None:intergenic | 45.0% | |
| GAAATCCTCCATTGGACGAT+GGG | + | chr3.1:64379003-64379022 | MS.gene70588:CDS | 45.0% | |
| GAACAAGACAAGTGAGGAAG+GGG | - | chr3.1:64375585-64375604 | None:intergenic | 45.0% | |
| GCCACTAATCCAACCTAACA+GGG | - | chr3.1:64375307-64375326 | None:intergenic | 45.0% | |
| GGAACAAGACAAGTGAGGAA+GGG | - | chr3.1:64375586-64375605 | None:intergenic | 45.0% | |
| GGAGAACCTACATGATATGC+AGG | - | chr3.1:64378658-64378677 | None:intergenic | 45.0% | |
| GTTCTTCTGTAGGAGTCTAC+CGG | + | chr3.1:64377532-64377551 | MS.gene70588:intron | 45.0% | |
| GTTGGATGGAAATCCTCCAT+TGG | + | chr3.1:64378995-64379014 | MS.gene70588:CDS | 45.0% | |
| TAAGATGACCGTGAAAGCCT+CGG | - | chr3.1:64377934-64377953 | None:intergenic | 45.0% | |
| TACCAATTCCCCAAATTCGC+TGG | - | chr3.1:64376167-64376186 | None:intergenic | 45.0% | |
| TCCCCTCACCTATTAGCAAA+TGG | + | chr3.1:64377790-64377809 | MS.gene70588:CDS | 45.0% | |
| TGCAAGAGTTCATTGCTGAC+AGG | - | chr3.1:64376196-64376215 | None:intergenic | 45.0% | |
| TGTCCAGCTAATGGAAAGAG+TGG | - | chr3.1:64374807-64374826 | None:intergenic | 45.0% | |
| TTGATGCATATCATCAGGGC+CGG | + | chr3.1:64378133-64378152 | MS.gene70588:intron | 45.0% | |
| TTTCCTCTGCCACAAATGCT+GGG | + | chr3.1:64375834-64375853 | MS.gene70588:CDS | 45.0% | |
| ! | AACAGGGAGTTTAAGGTCGT+TGG | - | chr3.1:64375029-64375048 | None:intergenic | 45.0% |
| ! | AACTGTTTCTTCCCTGCAAG+AGG | - | chr3.1:64377593-64377612 | None:intergenic | 45.0% |
| ! | CCGACATTTAAGGTCTTGTG+TGG | - | chr3.1:64379633-64379652 | None:intergenic | 45.0% |
| ! | GAGTTTAAGGTCGTTGGAGA+TGG | - | chr3.1:64375023-64375042 | None:intergenic | 45.0% |
| ! | TTTTCCTCTGCCACAAATGC+TGG | + | chr3.1:64375833-64375852 | MS.gene70588:CDS | 45.0% |
| !! | CTATGGCCTTGTTTCATAGC+AGG | + | chr3.1:64377386-64377405 | MS.gene70588:intron | 45.0% |
| !! | TCCCTGTTAGGTTGGATTAG+TGG | + | chr3.1:64375303-64375322 | MS.gene70588:intron | 45.0% |
| !! | TGTTAGGTTGGATTAGTGGC+CGG | + | chr3.1:64375307-64375326 | MS.gene70588:intron | 45.0% |
| !! | TTGAGGGTGTTTCTTCTCAG+CGG | + | chr3.1:64376416-64376435 | MS.gene70588:CDS | 45.0% |
| AACCGAGCCTCCAAAAACGA+TGG | + | chr3.1:64378184-64378203 | MS.gene70588:intron | 50.0% | |
| AACGGCCCTGCATATCATGT+AGG | + | chr3.1:64378649-64378668 | MS.gene70588:intron | 50.0% | |
| AAGATGACCGTGAAAGCCTC+GGG | - | chr3.1:64377933-64377952 | None:intergenic | 50.0% | |
| AAGCAATGCAGCAGGACACA+AGG | + | chr3.1:64376653-64376672 | MS.gene70588:CDS | 50.0% | |
| ACCGAGCCTCCAAAAACGAT+GGG | + | chr3.1:64378185-64378204 | MS.gene70588:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+GGG | - | chr3.1:64378444-64378463 | None:intergenic | 50.0% | |
| AGCCAGCGAATTTGGGGAAT+TGG | + | chr3.1:64376162-64376181 | MS.gene70588:CDS | 50.0% | |
| AGGTGAATCTGTTGCCGTTG+AGG | + | chr3.1:64379575-64379594 | MS.gene70588:intron | 50.0% | |
| ATCTGTTGCCGTTGAGGATG+AGG | + | chr3.1:64379581-64379600 | MS.gene70588:CDS | 50.0% | |
| CACTCCTACGTCGTAGGAAA+GGG | - | chr3.1:64378445-64378464 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | chr3.1:64378639-64378658 | None:intergenic | 50.0% | |
| CTAATAGGTGAGGGGATGTG+TGG | - | chr3.1:64377786-64377805 | None:intergenic | 50.0% | |
| CTGCAAGCTTACCTGATTGC+AGG | + | chr3.1:64376336-64376355 | MS.gene70588:intron | 50.0% | |
| CTGCTGCATTGCTTCAAAGC+TGG | - | chr3.1:64376647-64376666 | None:intergenic | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | - | chr3.1:64378451-64378470 | None:intergenic | 50.0% | |
| GAGAGTTGTGGCGGTTATCA+TGG | + | chr3.1:64374725-64374744 | MS.gene70588:CDS | 50.0% | |
| GATATCCTCTCACCTCTTGC+AGG | + | chr3.1:64377578-64377597 | MS.gene70588:CDS | 50.0% | |
| GCAAATGCTCGTATAGGAGC+TGG | + | chr3.1:64378823-64378842 | MS.gene70588:CDS | 50.0% | |
| GCAACAGATTCACCTGGTCA+CGG | - | chr3.1:64379570-64379589 | None:intergenic | 50.0% | |
| GGAAATCCTCCATTGGACGA+TGG | + | chr3.1:64379002-64379021 | MS.gene70588:CDS | 50.0% | |
| GGCCACTAATCCAACCTAAC+AGG | - | chr3.1:64375308-64375327 | None:intergenic | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | chr3.1:64378636-64378655 | None:intergenic | 50.0% | |
| GGGAACAAGACAAGTGAGGA+AGG | - | chr3.1:64375587-64375606 | None:intergenic | 50.0% | |
| GTTGTGGCGGTTATCATGGT+TGG | + | chr3.1:64374729-64374748 | MS.gene70588:CDS | 50.0% | |
| TCAACGGCAACAGATTCACC+TGG | - | chr3.1:64379576-64379595 | None:intergenic | 50.0% | |
| TCACTCCTACGTCGTAGGAA+AGG | - | chr3.1:64378446-64378465 | None:intergenic | 50.0% | |
| TCCATTAGCTGGACAACCCA+TGG | + | chr3.1:64374812-64374831 | MS.gene70588:CDS | 50.0% | |
| TCTTCTCAGCGGAAAGACAG+AGG | + | chr3.1:64376427-64376446 | MS.gene70588:CDS | 50.0% | |
| TGCAGAAGAGAGAGTTGTGG+CGG | + | chr3.1:64374716-64374735 | MS.gene70588:CDS | 50.0% | |
| TGGTGGCATGGGAACAATAC+TGG | + | chr3.1:64376029-64376048 | MS.gene70588:CDS | 50.0% | |
| TGTCATCATGGAGGAGGATC+CGG | + | chr3.1:64375677-64375696 | MS.gene70588:CDS | 50.0% | |
| TTACCCAGCATTTGTGGCAG+AGG | - | chr3.1:64375840-64375859 | None:intergenic | 50.0% | |
| TTGAAGGAGGACAAGCCTCA+TGG | + | chr3.1:64375624-64375643 | MS.gene70588:CDS | 50.0% | |
| TTTCCCCTTTCCTACGACGT+AGG | + | chr3.1:64378438-64378457 | MS.gene70588:intron | 50.0% | |
| ! | AAAGGTGCATCCGTCTGCAA+AGG | + | chr3.1:64377867-64377886 | MS.gene70588:CDS | 50.0% |
| ! | ACCATGGGTTGTCCAGCTAA+TGG | - | chr3.1:64374816-64374835 | None:intergenic | 50.0% |
| ! | GTGGTTGAACAGATTGGTCC+TGG | + | chr3.1:64378787-64378806 | MS.gene70588:intron | 50.0% |
| !! | ACATCTAGTTCTCTACCCCG+AGG | + | chr3.1:64377914-64377933 | MS.gene70588:intron | 50.0% |
| !! | CAGCTTTGAAGCAATGCAGC+AGG | + | chr3.1:64376645-64376664 | MS.gene70588:CDS | 50.0% |
| !! | TTGAGGCCCATCGTTTTTGG+AGG | - | chr3.1:64378194-64378213 | None:intergenic | 50.0% |
| ACGGAATCGAGTGCCTTTGG+TGG | - | chr3.1:64374760-64374779 | None:intergenic | 55.0% | |
| AGAACCTCTTGCACTCCCCA+GGG | - | chr3.1:64378160-64378179 | None:intergenic | 55.0% | |
| AGATGACCGTGAAAGCCTCG+GGG | - | chr3.1:64377932-64377951 | None:intergenic | 55.0% | |
| ATGGTTGGAGGACCCACCAA+AGG | + | chr3.1:64374744-64374763 | MS.gene70588:CDS | 55.0% | |
| CAGCAGCAGGGAAGAGAGAA+AGG | - | chr3.1:64376302-64376321 | None:intergenic | 55.0% | |
| CGGAATCGAGTGCCTTTGGT+GGG | - | chr3.1:64374759-64374778 | None:intergenic | 55.0% | |
| CGGAGTCAGCCAGCGAATTT+GGG | + | chr3.1:64376155-64376174 | MS.gene70588:CDS | 55.0% | |
| CTCGTATAGGAGCTGGTGCA+AGG | + | chr3.1:64378830-64378849 | MS.gene70588:CDS | 55.0% | |
| GACGGATGCACCTTTGCTGA+TGG | - | chr3.1:64377862-64377881 | None:intergenic | 55.0% | |
| GGAGTCAGCCAGCGAATTTG+GGG | + | chr3.1:64376156-64376175 | MS.gene70588:CDS | 55.0% | |
| GTGGCGGTTATCATGGTTGG+AGG | + | chr3.1:64374732-64374751 | MS.gene70588:CDS | 55.0% | |
| TAGAACCTCTTGCACTCCCC+AGG | - | chr3.1:64378161-64378180 | None:intergenic | 55.0% | |
| TCTCTACCCCGAGGCTTTCA+CGG | + | chr3.1:64377923-64377942 | MS.gene70588:intron | 55.0% | |
| TCTTCCCTGCAAGAGGTGAG+AGG | - | chr3.1:64377586-64377605 | None:intergenic | 55.0% | |
| TGCCGTTGAGGATGAGGTAG+TGG | + | chr3.1:64379587-64379606 | MS.gene70588:CDS | 55.0% | |
| TGGACGGAATCGAGTGCCTT+TGG | - | chr3.1:64374763-64374782 | None:intergenic | 55.0% | |
| ! | CCAAATTCGCTGGCTGACTC+CGG | - | chr3.1:64376157-64376176 | None:intergenic | 55.0% |
| ! | GACAAGCCTCATGGTTCTGC+CGG | + | chr3.1:64375633-64375652 | MS.gene70588:CDS | 55.0% |
| !! | GCCCATCGTTTTTGGAGGCT+CGG | - | chr3.1:64378189-64378208 | None:intergenic | 55.0% |
| !! | GGTTGGATTAGTGGCCGGTT+TGG | + | chr3.1:64375312-64375331 | MS.gene70588:intron | 55.0% |
| ACGTGCCCATCGTCCAATGG+AGG | - | chr3.1:64379011-64379030 | None:intergenic | 60.0% | |
| AGACCACCGGCAGAACCATG+AGG | - | chr3.1:64375642-64375661 | None:intergenic | 60.0% | |
| ATATCATCAGGGCCGGACCC+TGG | + | chr3.1:64378140-64378159 | MS.gene70588:intron | 60.0% | |
| CCGGAGTCAGCCAGCGAATT+TGG | + | chr3.1:64376154-64376173 | MS.gene70588:CDS | 60.0% | |
| CTTGTTCTCGTGCCGTGACC+AGG | + | chr3.1:64379555-64379574 | MS.gene70588:intron | 60.0% | |
| GACACGTGCCCATCGTCCAA+TGG | - | chr3.1:64379014-64379033 | None:intergenic | 60.0% | |
| GGCACGTGTCCAGGCAAGTT+TGG | + | chr3.1:64379024-64379043 | MS.gene70588:intron | 60.0% | |
| TATCATCAGGGCCGGACCCT+GGG | + | chr3.1:64378141-64378160 | MS.gene70588:intron | 60.0% | |
| ! | AAGCCTCATGGTTCTGCCGG+TGG | + | chr3.1:64375636-64375655 | MS.gene70588:CDS | 60.0% |
| ACTCCCTCCCCATACCCGTG+AGG | + | chr3.1:64378679-64378698 | MS.gene70588:intron | 65.0% | |
| AGGTCCTCACGGGTATGGGG+AGG | - | chr3.1:64378686-64378705 | None:intergenic | 65.0% | |
| ATCATCAGGGCCGGACCCTG+GGG | + | chr3.1:64378142-64378161 | MS.gene70588:intron | 65.0% | |
| CACGGGTATGGGGAGGGAGT+AGG | - | chr3.1:64378679-64378698 | None:intergenic | 65.0% | |
| CTCTTGCACTCCCCAGGGTC+CGG | - | chr3.1:64378155-64378174 | None:intergenic | 65.0% | |
| GGTCCTCACGGGTATGGGGA+GGG | - | chr3.1:64378685-64378704 | None:intergenic | 65.0% | |
| TGGACGATGGGCACGTGTCC+AGG | + | chr3.1:64379015-64379034 | MS.gene70588:CDS | 65.0% | |
| ! | CGGACCCTGGGGAGTGCAAG+AGG | + | chr3.1:64378153-64378172 | MS.gene70588:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 64374708 | 64379677 | 64374708 | ID=MS.gene70588 |
| chr3.1 | mRNA | 64374708 | 64379677 | 64374708 | ID=MS.gene70588.t1;Parent=MS.gene70588 |
| chr3.1 | exon | 64374708 | 64374863 | 64374708 | ID=MS.gene70588.t1.exon1;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64374708 | 64374863 | 64374708 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64374950 | 64375050 | 64374950 | ID=MS.gene70588.t1.exon2;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64374950 | 64375050 | 64374950 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64375620 | 64375698 | 64375620 | ID=MS.gene70588.t1.exon3;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64375620 | 64375698 | 64375620 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64375795 | 64375855 | 64375795 | ID=MS.gene70588.t1.exon4;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64375795 | 64375855 | 64375795 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64376013 | 64376059 | 64376013 | ID=MS.gene70588.t1.exon5;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64376013 | 64376059 | 64376013 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64376148 | 64376240 | 64376148 | ID=MS.gene70588.t1.exon6;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64376148 | 64376240 | 64376148 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64376358 | 64376448 | 64376358 | ID=MS.gene70588.t1.exon7;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64376358 | 64376448 | 64376358 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64376626 | 64376674 | 64376626 | ID=MS.gene70588.t1.exon8;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64376626 | 64376674 | 64376626 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64377544 | 64377660 | 64377544 | ID=MS.gene70588.t1.exon9;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64377544 | 64377660 | 64377544 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64377741 | 64377888 | 64377741 | ID=MS.gene70588.t1.exon10;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64377741 | 64377888 | 64377741 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64378799 | 64378891 | 64378799 | ID=MS.gene70588.t1.exon11;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64378799 | 64378891 | 64378799 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64378968 | 64379036 | 64378968 | ID=MS.gene70588.t1.exon12;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64378968 | 64379036 | 64378968 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64379177 | 64379219 | 64379177 | ID=MS.gene70588.t1.exon13;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64379177 | 64379219 | 64379177 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| chr3.1 | exon | 64379577 | 64379677 | 64379577 | ID=MS.gene70588.t1.exon14;Parent=MS.gene70588.t1 |
| chr3.1 | CDS | 64379577 | 64379677 | 64379577 | ID=cds.MS.gene70588.t1;Parent=MS.gene70588.t1 |
| Gene Sequence |
| Protein sequence |
