Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72817.t1 | BBH05442.1 | 82.4 | 278 | 43 | 1 | 1 | 272 | 1 | 278 | 5.00E-105 | 391.3 |
| MS.gene72817.t1 | BBH05442.1 | 43.5 | 138 | 66 | 3 | 252 | 383 | 704 | 835 | 5.30E-14 | 89 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72817.t1 | P10978 | 30.2 | 255 | 168 | 5 | 7 | 258 | 5 | 252 | 6.2e-27 | 123.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72817.t1 | A0A4Y1RM46 | 82.4 | 278 | 43 | 1 | 1 | 272 | 1 | 278 | 3.6e-105 | 391.3 |
| MS.gene72817.t1 | A0A4Y1RM46 | 43.5 | 138 | 66 | 3 | 252 | 383 | 704 | 835 | 3.8e-14 | 89.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene72817 | 0.823594 | 1.27E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene72817 | 0.815942 | 7.14E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene72817 | 0.823874 | 1.09E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene72817 | 0.822569 | 2.21E-53 | -1.69E-46 |
| MS.gene052775 | MS.gene72817 | 0.802859 | 4.59E-49 | -1.69E-46 |
| MS.gene052776 | MS.gene72817 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene72817 | 0.80566 | 1.20E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene72817 | 0.801457 | 8.92E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene72817 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene054893 | MS.gene72817 | 0.802127 | 6.50E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene72817 | 0.82956 | 4.81E-55 | -1.69E-46 |
| MS.gene05615 | MS.gene72817 | 0.815988 | 6.97E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene72817 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene056973 | MS.gene72817 | 0.807439 | 5.05E-50 | -1.69E-46 |
| MS.gene057890 | MS.gene72817 | -0.821827 | 3.28E-53 | -1.69E-46 |
| MS.gene057893 | MS.gene72817 | -0.802338 | 5.88E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene72817 | 0.803457 | 3.45E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene72817 | 0.800658 | 1.30E-48 | -1.69E-46 |
| MS.gene05985 | MS.gene72817 | -0.802086 | 6.63E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene72817 | 0.831639 | 1.49E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene72817 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene061100 | MS.gene72817 | 0.836465 | 9.21E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72817.t1 | MTR_2g039140 | 40.217 | 184 | 77 | 3 | 1 | 183 | 120 | 271 | 1.99e-31 | 120 |
| MS.gene72817.t1 | MTR_4g036430 | 89.744 | 39 | 4 | 0 | 1 | 39 | 31 | 69 | 1.45e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72817.t1 | AT3G29785 | 58.889 | 90 | 36 | 1 | 11 | 100 | 7 | 95 | 4.09e-31 | 114 |
Find 81 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATACCAACTGAACTTAAT+TGG | 0.091541 | 5.1:-17357217 | None:intergenic |
| CTGAGAACTACGATGATTTC+TGG | 0.189947 | 5.1:-17357501 | None:intergenic |
| ATCTCATCTGTGGGACTTCC+TGG | 0.243179 | 5.1:-17359003 | None:intergenic |
| TCATCATCCTTCATCGATTC+TGG | 0.247368 | 5.1:-17356957 | None:intergenic |
| TCTAGAAGACCTTCTTAATT+CGG | 0.291097 | 5.1:-17359100 | None:intergenic |
| ACTACGATGATTTCTGGATT+TGG | 0.314338 | 5.1:-17357495 | None:intergenic |
| TTCTGCCAATTCCTCTGATT+GGG | 0.327914 | 5.1:-17359028 | None:intergenic |
| ATTCTGCCAATTCCTCTGAT+TGG | 0.336830 | 5.1:-17359029 | None:intergenic |
| AATACCAACTGAACTTAATT+GGG | 0.364604 | 5.1:-17357216 | None:intergenic |
| CTAGAAGACCTTCTTAATTC+GGG | 0.376595 | 5.1:-17359099 | None:intergenic |
| ATGGTGCGGACTTTGGCTTT+TGG | 0.377376 | 5.1:+17356871 | MS.gene72817:CDS |
| TAGTTTATGTATCTACTGTT+TGG | 0.377907 | 5.1:-17359132 | None:intergenic |
| ATTTCTGGATTTGGATCGTC+TGG | 0.389287 | 5.1:-17357486 | None:intergenic |
| CATGCTTCATCATAATCTTC+AGG | 0.392057 | 5.1:-17359180 | None:intergenic |
| GTAGAGATGGATGATGTTCC+AGG | 0.394130 | 5.1:+17358985 | MS.gene72817:CDS |
| GATTCCCCAATCAGAGGAAT+TGG | 0.403290 | 5.1:+17359023 | MS.gene72817:CDS |
| TGTCTTCCCTACCGGATAGT+TGG | 0.403395 | 5.1:+17357273 | MS.gene72817:CDS |
| TCATCCATCTCTACATAAAC+AGG | 0.414467 | 5.1:-17358976 | None:intergenic |
| GACCTTCTTAATTCGGGAAC+TGG | 0.415598 | 5.1:-17359093 | None:intergenic |
| AGAAATTCAACCAGAGGAAA+TGG | 0.417568 | 5.1:+17357446 | MS.gene72817:CDS |
| ATTTGATGATGTTCGTGATC+TGG | 0.433721 | 5.1:+17357346 | MS.gene72817:CDS |
| GCAAATGTTGCTTCCACCTC+AGG | 0.445655 | 5.1:+17357620 | MS.gene72817:CDS |
| GAAATCAGACGAAGAGAGTT+GGG | 0.452321 | 5.1:+17357380 | MS.gene72817:CDS |
| AAGTTCGATGGTGCGGACTT+TGG | 0.452497 | 5.1:+17356864 | MS.gene72817:CDS |
| ACCTTTGTTAACATATCTGC+AGG | 0.453202 | 5.1:-17360650 | None:intergenic |
| TGAACTTTATTTGATGCTGA+AGG | 0.474628 | 5.1:-17357110 | None:intergenic |
| TTTACCACGTCCATTTCCTC+TGG | 0.487326 | 5.1:-17357456 | None:intergenic |
| ACAGTAGCGCTCCAACTATC+CGG | 0.504765 | 5.1:-17357284 | None:intergenic |
| TGAGGCGGTTGTTTACGCTT+CGG | 0.506448 | 5.1:+17357138 | MS.gene72817:CDS |
| ACAGCTGTGAGTAGCTCCTC+AGG | 0.511518 | 5.1:+17357308 | MS.gene72817:CDS |
| TCTATCGAGTGTTGGAATTG+TGG | 0.512167 | 5.1:+17357533 | MS.gene72817:CDS |
| AACTACATGTTGTTAACTGA+TGG | 0.513907 | 5.1:+17359150 | MS.gene72817:CDS |
| CGCGTCACCTCCTCCTGAGG+TGG | 0.515832 | 5.1:-17357633 | None:intergenic |
| AGAAATCAGACGAAGAGAGT+TGG | 0.518723 | 5.1:+17357379 | MS.gene72817:CDS |
| CTCCAGTTCCCGAATTAAGA+AGG | 0.522663 | 5.1:+17359091 | MS.gene72817:CDS |
| AAAGAAACCAGAATCGATGA+AGG | 0.539324 | 5.1:+17356950 | MS.gene72817:CDS |
| TGTTGGAATTGTGGAAAGAC+GGG | 0.540082 | 5.1:+17357542 | MS.gene72817:CDS |
| GATTGGGGAATCTCATCTGT+GGG | 0.541163 | 5.1:-17359012 | None:intergenic |
| TGATTGGGGAATCTCATCTG+TGG | 0.543207 | 5.1:-17359013 | None:intergenic |
| GCTCCCAGCAAAGAATCAAA+AGG | 0.550240 | 5.1:+17357586 | MS.gene72817:CDS |
| CAAATAAAGTTCATTTGATG+AGG | 0.550433 | 5.1:+17357120 | MS.gene72817:CDS |
| ACTCGAAATCTATCGAGTGT+TGG | 0.561027 | 5.1:+17357525 | MS.gene72817:CDS |
| TTTACGCTTCGGATGACAGA+AGG | 0.562705 | 5.1:+17357149 | MS.gene72817:CDS |
| GTGAAAATTGAAAAGTTCGA+TGG | 0.563926 | 5.1:+17356852 | MS.gene72817:CDS |
| AACCACCGCTGGTCTTATGA+AGG | 0.564679 | 5.1:+17357064 | MS.gene72817:CDS |
| GTGTTGGAATTGTGGAAAGA+CGG | 0.567490 | 5.1:+17357541 | MS.gene72817:CDS |
| CTCTGTATGCAATACTGAAG+AGG | 0.567853 | 5.1:-17357414 | None:intergenic |
| ACAACCCAATTAAGTTCAGT+TGG | 0.568124 | 5.1:+17357212 | MS.gene72817:CDS |
| AAGTTGTGCTCAACTTCAGT+TGG | 0.568559 | 5.1:+17360692 | MS.gene72817:CDS |
| GTTGCTTCCACCTCAGGAGG+AGG | 0.568689 | 5.1:+17357626 | MS.gene72817:CDS |
| TCTGCCAATTCCTCTGATTG+GGG | 0.571085 | 5.1:-17359027 | None:intergenic |
| TGCAGATATGTTAACAAAGG+TGG | 0.579513 | 5.1:+17360652 | MS.gene72817:CDS |
| CTCCCACTTACTAGCATCCG+TGG | 0.588137 | 5.1:-17359208 | None:intergenic |
| GGAACTGGAGTATGATGCAC+TGG | 0.590441 | 5.1:-17359078 | None:intergenic |
| GATGACAGAAGGCGCATCAG+TGG | 0.593273 | 5.1:+17357160 | MS.gene72817:CDS |
| AAATGGACGTGGTAAATCAA+AGG | 0.596335 | 5.1:+17357463 | MS.gene72817:CDS |
| ATAAAGTTCATTTGATGAGG+CGG | 0.598437 | 5.1:+17357123 | MS.gene72817:CDS |
| TAGCGCTCCAACTATCCGGT+AGG | 0.600270 | 5.1:-17357280 | None:intergenic |
| CTTCTCGATAGACAAGCACT+TGG | 0.601850 | 5.1:+17356987 | MS.gene72817:CDS |
| CGAGCCTGTTTATGTAGAGA+TGG | 0.602356 | 5.1:+17358972 | MS.gene72817:CDS |
| CATGGCTGCAGACGAAGGAA+AGG | 0.603913 | 5.1:+17356830 | None:intergenic |
| AATGTTGCTTCCACCTCAGG+AGG | 0.603928 | 5.1:+17357623 | MS.gene72817:CDS |
| AATCGATGAAGGATGATGAG+TGG | 0.606445 | 5.1:+17356961 | MS.gene72817:CDS |
| AATTGAAAAGTTCGATGGTG+CGG | 0.608192 | 5.1:+17356857 | MS.gene72817:CDS |
| AACCTTCATAAGACCAGCGG+TGG | 0.609150 | 5.1:-17357066 | None:intergenic |
| TGGTATTGAATTTGACGATG+AGG | 0.610535 | 5.1:+17357232 | MS.gene72817:CDS |
| AGCGCTCCAACTATCCGGTA+GGG | 0.611409 | 5.1:-17357279 | None:intergenic |
| CAAGTGCTTGTCTATCGAGA+AGG | 0.612004 | 5.1:-17356986 | None:intergenic |
| GGAGTCATGGCTGCAGACGA+AGG | 0.612637 | 5.1:+17356825 | None:intergenic |
| TACATGTTGTTAACTGATGG+AGG | 0.616383 | 5.1:+17359153 | MS.gene72817:CDS |
| GAATCAAAAGGCGAAAGATG+AGG | 0.623736 | 5.1:+17357598 | MS.gene72817:CDS |
| GCAAAAGAGAAAACCACCGC+TGG | 0.626545 | 5.1:+17357053 | MS.gene72817:CDS |
| AGATGAGATTCCCCAATCAG+AGG | 0.627217 | 5.1:+17359017 | MS.gene72817:CDS |
| TCCTGCAGATATGTTAACAA+AGG | 0.629429 | 5.1:+17360649 | MS.gene72817:CDS |
| CAACGCGTCACCTCCTCCTG+AGG | 0.630580 | 5.1:-17357636 | None:intergenic |
| AGAGGAAGAAATTCAACCAG+AGG | 0.643795 | 5.1:+17357440 | MS.gene72817:CDS |
| TCAACCAGAGGAAATGGACG+TGG | 0.665050 | 5.1:+17357452 | MS.gene72817:CDS |
| TGATGCACTGGTGTGTCAGA+CGG | 0.673844 | 5.1:-17359066 | None:intergenic |
| GTATTGCATACAGAGTCAAG+AGG | 0.682691 | 5.1:+17357422 | MS.gene72817:CDS |
| TGATGAAGCATGTCAGACCA+CGG | 0.691661 | 5.1:+17359191 | MS.gene72817:CDS |
| AAGAACCTTCATAAGACCAG+CGG | 0.716246 | 5.1:-17357069 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTAAGATTAAGTTAAAT+GGG | + | chr5.1:17357819-17357838 | MS.gene72817:intron | 15.0% |
| !! | ATAACAAAACTTCTTGAATT+TGG | - | chr5.1:17358476-17358495 | None:intergenic | 20.0% |
| !! | GAAGTTAAGATTAAGTTAAA+TGG | + | chr5.1:17357818-17357837 | MS.gene72817:intron | 20.0% |
| !!! | CTAACATTGATTAAAATTCA+AGG | + | chr5.1:17360617-17360636 | MS.gene72817:intron | 20.0% |
| ! | AAAGGAGAAATAAAAGTAGA+AGG | + | chr5.1:17360251-17360270 | MS.gene72817:intron | 25.0% |
| ! | AATACCAACTGAACTTAATT+GGG | - | chr5.1:17357219-17357238 | None:intergenic | 25.0% |
| ! | AATTCTTGAACAATTCTTTC+TGG | - | chr5.1:17357730-17357749 | None:intergenic | 25.0% |
| ! | ACTGGTTATATATTTACTGT+TGG | + | chr5.1:17360323-17360342 | MS.gene72817:intron | 25.0% |
| ! | ATATGTGAAGATTGTATACT+TGG | + | chr5.1:17358163-17358182 | MS.gene72817:intron | 25.0% |
| ! | ATTCTTGAACAATTCTTTCT+GGG | - | chr5.1:17357729-17357748 | None:intergenic | 25.0% |
| ! | CAAATAAAGTTCATTTGATG+AGG | + | chr5.1:17357120-17357139 | MS.gene72817:CDS | 25.0% |
| ! | CAAATGAAAATCCTAATCTA+TGG | + | chr5.1:17358050-17358069 | MS.gene72817:intron | 25.0% |
| ! | TAGTTTATGTATCTACTGTT+TGG | - | chr5.1:17359135-17359154 | None:intergenic | 25.0% |
| ! | TATATATTTACTGTTGGTAC+TGG | + | chr5.1:17360329-17360348 | MS.gene72817:intron | 25.0% |
| AAAGAATTGATATGGCTTCA+AGG | + | chr5.1:17360437-17360456 | MS.gene72817:intron | 30.0% | |
| AACTACATGTTGTTAACTGA+TGG | + | chr5.1:17359150-17359169 | MS.gene72817:CDS | 30.0% | |
| AAGCTAGCAAAGAATTGATA+TGG | + | chr5.1:17360429-17360448 | MS.gene72817:intron | 30.0% | |
| ACAGAGAAATGTTTGTACTT+CGG | + | chr5.1:17360227-17360246 | MS.gene72817:intron | 30.0% | |
| ACGAAAAACTTAATCTCTGT+AGG | + | chr5.1:17357884-17357903 | MS.gene72817:intron | 30.0% | |
| AGAAAAAGGGAAAGAGAATA+TGG | + | chr5.1:17359581-17359600 | MS.gene72817:intron | 30.0% | |
| ATAAAGTTCATTTGATGAGG+CGG | + | chr5.1:17357123-17357142 | MS.gene72817:CDS | 30.0% | |
| CAATACCAACTGAACTTAAT+TGG | - | chr5.1:17357220-17357239 | None:intergenic | 30.0% | |
| GAATTTGACATGAAGGATTT+AGG | + | chr5.1:17359837-17359856 | MS.gene72817:intron | 30.0% | |
| GATGATTGGAAGATTTCTAA+AGG | + | chr5.1:17357947-17357966 | MS.gene72817:intron | 30.0% | |
| GGATGATGAAAACAAAAAGA+TGG | + | chr5.1:17358867-17358886 | MS.gene72817:intron | 30.0% | |
| GTCAAAAGAATTTGACATGA+AGG | + | chr5.1:17359830-17359849 | MS.gene72817:intron | 30.0% | |
| GTGAAAATTGAAAAGTTCGA+TGG | + | chr5.1:17356852-17356871 | MS.gene72817:CDS | 30.0% | |
| TAAGTTAAATGGGTCTGTAT+GGG | + | chr5.1:17357829-17357848 | MS.gene72817:intron | 30.0% | |
| TACAAGATTGTTCATTTCCA+AGG | - | chr5.1:17357781-17357800 | None:intergenic | 30.0% | |
| TATAACCAGTTGTACTTCTT+CGG | - | chr5.1:17360313-17360332 | None:intergenic | 30.0% | |
| TCTAGAAGACCTTCTTAATT+CGG | - | chr5.1:17359103-17359122 | None:intergenic | 30.0% | |
| TGGAAATGAACAATCTTGTA+AGG | + | chr5.1:17357781-17357800 | MS.gene72817:intron | 30.0% | |
| TGTTGAATCTTTGCAAAACA+CGG | - | chr5.1:17359947-17359966 | None:intergenic | 30.0% | |
| TTAAGTTAAATGGGTCTGTA+TGG | + | chr5.1:17357828-17357847 | MS.gene72817:intron | 30.0% | |
| ! | ATACCAAGAATTTTCTTTGC+CGG | - | chr5.1:17359864-17359883 | None:intergenic | 30.0% |
| ! | GTTTTGCAAAGATTCAACAT+GGG | + | chr5.1:17359948-17359967 | MS.gene72817:intron | 30.0% |
| ! | TATTTGAAGCTTTCAAGAGA+TGG | + | chr5.1:17358374-17358393 | MS.gene72817:intron | 30.0% |
| ! | TGAACTTTATTTGATGCTGA+AGG | - | chr5.1:17357113-17357132 | None:intergenic | 30.0% |
| ! | TGTTTTGCAAAGATTCAACA+TGG | + | chr5.1:17359947-17359966 | MS.gene72817:intron | 30.0% |
| !! | AAGCAGTTAAATGGATTTTG+AGG | + | chr5.1:17360189-17360208 | MS.gene72817:intron | 30.0% |
| !! | CTTTTATTGATGATCACTCT+AGG | + | chr5.1:17358314-17358333 | MS.gene72817:intron | 30.0% |
| !!! | AAGAAGTTTTGTTATGAGCA+CGG | + | chr5.1:17358481-17358500 | MS.gene72817:intron | 30.0% |
| AAACTTTACCAAGGTTACCA+GGG | - | chr5.1:17357757-17357776 | None:intergenic | 35.0% | |
| AAAGAAACCAGAATCGATGA+AGG | + | chr5.1:17356950-17356969 | MS.gene72817:CDS | 35.0% | |
| AAAGAGTGATGTACAAAGAC+AGG | + | chr5.1:17358917-17358936 | MS.gene72817:intron | 35.0% | |
| AAAGTGCACTTCTTGGATTT+GGG | - | chr5.1:17358808-17358827 | None:intergenic | 35.0% | |
| AAATCCAGGTAAAGCTCATT+GGG | + | chr5.1:17360166-17360185 | MS.gene72817:intron | 35.0% | |
| AAATGGACGTGGTAAATCAA+AGG | + | chr5.1:17357463-17357482 | MS.gene72817:CDS | 35.0% | |
| AAATGTTTGTACTTCGGCAA+AGG | + | chr5.1:17360233-17360252 | MS.gene72817:intron | 35.0% | |
| AACCTTGGTAAAGTTTACCT+TGG | + | chr5.1:17357761-17357780 | MS.gene72817:intron | 35.0% | |
| AATCTATGGCACAAGAGATT+AGG | + | chr5.1:17358064-17358083 | MS.gene72817:intron | 35.0% | |
| AATCTCTTGTGCCATAGATT+AGG | - | chr5.1:17358064-17358083 | None:intergenic | 35.0% | |
| AATTGAAAAGTTCGATGGTG+CGG | + | chr5.1:17356857-17356876 | MS.gene72817:CDS | 35.0% | |
| ACAACCCAATTAAGTTCAGT+TGG | + | chr5.1:17357212-17357231 | MS.gene72817:CDS | 35.0% | |
| ACCTTTGTTAACATATCTGC+AGG | - | chr5.1:17360653-17360672 | None:intergenic | 35.0% | |
| AGAAATTCAACCAGAGGAAA+TGG | + | chr5.1:17357446-17357465 | MS.gene72817:CDS | 35.0% | |
| AGACTTCATTTCGTCTTTCA+TGG | - | chr5.1:17359238-17359257 | None:intergenic | 35.0% | |
| AGGTTAAAGAAGAGCTTGTA+TGG | + | chr5.1:17359609-17359628 | MS.gene72817:intron | 35.0% | |
| ATATACATGCATCAACCAGA+AGG | + | chr5.1:17359552-17359571 | MS.gene72817:intron | 35.0% | |
| ATCACGAGAGATAAGCAAAA+AGG | + | chr5.1:17359888-17359907 | MS.gene72817:intron | 35.0% | |
| ATCTCTTGAAGAAGCAACAA+TGG | - | chr5.1:17359716-17359735 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCACTCAAA+AGG | + | chr5.1:17358106-17358125 | MS.gene72817:intron | 35.0% | |
| ATTAGGCCATATGAGTGAAA+AGG | + | chr5.1:17358081-17358100 | MS.gene72817:intron | 35.0% | |
| ATTCCATATGCTTCAGCAAT+TGG | + | chr5.1:17360068-17360087 | MS.gene72817:intron | 35.0% | |
| CAAGGATTGTTAACAGAGTT+AGG | + | chr5.1:17360455-17360474 | MS.gene72817:intron | 35.0% | |
| CAGAAGGATTCTCAGAAAAA+GGG | + | chr5.1:17359568-17359587 | MS.gene72817:intron | 35.0% | |
| CATGCTTCATCATAATCTTC+AGG | - | chr5.1:17359183-17359202 | None:intergenic | 35.0% | |
| CTAGAAGACCTTCTTAATTC+GGG | - | chr5.1:17359102-17359121 | None:intergenic | 35.0% | |
| CTTCATTAGATCTCTTCTTG+AGG | + | chr5.1:17360586-17360605 | MS.gene72817:intron | 35.0% | |
| GAACAATCTTGTAAGGTTGT+GGG | + | chr5.1:17357788-17357807 | MS.gene72817:intron | 35.0% | |
| GAAGTACAAACATTTCTCTG+TGG | - | chr5.1:17360228-17360247 | None:intergenic | 35.0% | |
| GACACTTCAAAAATCAGTGT+AGG | + | chr5.1:17357564-17357583 | MS.gene72817:CDS | 35.0% | |
| GTGAAAACTGCATTTCTTCA+TGG | + | chr5.1:17359513-17359532 | MS.gene72817:intron | 35.0% | |
| TAAACTTTACCAAGGTTACC+AGG | - | chr5.1:17357758-17357777 | None:intergenic | 35.0% | |
| TACATGTTGTTAACTGATGG+AGG | + | chr5.1:17359153-17359172 | MS.gene72817:CDS | 35.0% | |
| TATGTGCACATTAGTGATCA+AGG | + | chr5.1:17358766-17358785 | MS.gene72817:intron | 35.0% | |
| TCATCCATCTCTACATAAAC+AGG | - | chr5.1:17358979-17358998 | None:intergenic | 35.0% | |
| TCCTGCAGATATGTTAACAA+AGG | + | chr5.1:17360649-17360668 | MS.gene72817:CDS | 35.0% | |
| TCTTCATGGAGACTTAAATG+AGG | + | chr5.1:17359527-17359546 | MS.gene72817:intron | 35.0% | |
| TGAACAATCTTGTAAGGTTG+TGG | + | chr5.1:17357787-17357806 | MS.gene72817:intron | 35.0% | |
| TGCAGATATGTTAACAAAGG+TGG | + | chr5.1:17360652-17360671 | MS.gene72817:CDS | 35.0% | |
| TTAGGCCATATGAGTGAAAA+GGG | + | chr5.1:17358082-17358101 | MS.gene72817:intron | 35.0% | |
| TTCATATTCACCACCATTGT+CGG | - | chr5.1:17358449-17358468 | None:intergenic | 35.0% | |
| TTCCAAGGTAAACTTTACCA+AGG | - | chr5.1:17357766-17357785 | None:intergenic | 35.0% | |
| TTGTTCAAGAATTATGTCCC+TGG | + | chr5.1:17357737-17357756 | MS.gene72817:intron | 35.0% | |
| TTTGATCTCCAATCAGACAT+GGG | + | chr5.1:17359257-17359276 | MS.gene72817:intron | 35.0% | |
| ! | ACTACGATGATTTCTGGATT+TGG | - | chr5.1:17357498-17357517 | None:intergenic | 35.0% |
| ! | ATTAAGTTTTTCGTGAGGTC+GGG | - | chr5.1:17357878-17357897 | None:intergenic | 35.0% |
| ! | CAGAGATTAAGTTTTTCGTG+AGG | - | chr5.1:17357883-17357902 | None:intergenic | 35.0% |
| ! | CTCTCACATCTTAGAGTTTT+TGG | + | chr5.1:17358733-17358752 | MS.gene72817:intron | 35.0% |
| ! | GATTAAGTTTTTCGTGAGGT+CGG | - | chr5.1:17357879-17357898 | None:intergenic | 35.0% |
| ! | TATTGATGATCACTCTAGGA+AGG | + | chr5.1:17358318-17358337 | MS.gene72817:intron | 35.0% |
| ! | TCTGGTATTTTATGCTCCAA+TGG | - | chr5.1:17358685-17358704 | None:intergenic | 35.0% |
| ! | TGGTATTGAATTTGACGATG+AGG | + | chr5.1:17357232-17357251 | MS.gene72817:CDS | 35.0% |
| ! | TTTCATCTTTTTGCTTCCTG+AGG | - | chr5.1:17357327-17357346 | None:intergenic | 35.0% |
| !! | ATTTGATGATGTTCGTGATC+TGG | + | chr5.1:17357346-17357365 | MS.gene72817:CDS | 35.0% |
| !! | GATTGTTGCTTTATCCACTA+CGG | + | chr5.1:17360382-17360401 | MS.gene72817:intron | 35.0% |
| !! | GTTGATGATATGTTAGTAGC+AGG | + | chr5.1:17359768-17359787 | MS.gene72817:intron | 35.0% |
| !!! | AGAAGTTTTGTTATGAGCAC+GGG | + | chr5.1:17358482-17358501 | MS.gene72817:intron | 35.0% |
| !!! | TGGATTTTGAGGTATCTAAG+AGG | + | chr5.1:17360200-17360219 | MS.gene72817:intron | 35.0% |
| AAAAAGCTCAGAACCGACAA+TGG | + | chr5.1:17358433-17358452 | MS.gene72817:intron | 40.0% | |
| AAATCTTCCAATCATCACCG+TGG | - | chr5.1:17357943-17357962 | None:intergenic | 40.0% | |
| AACAGAGTTAGGATTCATGC+AGG | + | chr5.1:17360466-17360485 | MS.gene72817:intron | 40.0% | |
| AACTTCATATACCACTGCCT+TGG | - | chr5.1:17359648-17359667 | None:intergenic | 40.0% | |
| AAGAAAAAGAACTCATGGCC+AGG | + | chr5.1:17360045-17360064 | MS.gene72817:intron | 40.0% | |
| AAGAACCTTCATAAGACCAG+CGG | - | chr5.1:17357072-17357091 | None:intergenic | 40.0% | |
| AAGGAAAACTACCAGGTCTT+CGG | + | chr5.1:17358125-17358144 | MS.gene72817:intron | 40.0% | |
| AAGTTGTGCTCAACTTCAGT+TGG | + | chr5.1:17360692-17360711 | MS.gene72817:CDS | 40.0% | |
| AATCGATGAAGGATGATGAG+TGG | + | chr5.1:17356961-17356980 | MS.gene72817:CDS | 40.0% | |
| AATTATGTCCCTGGTAACCT+TGG | + | chr5.1:17357746-17357765 | MS.gene72817:intron | 40.0% | |
| ACTCGAAATCTATCGAGTGT+TGG | + | chr5.1:17357525-17357544 | MS.gene72817:CDS | 40.0% | |
| AGAAATCAGACGAAGAGAGT+TGG | + | chr5.1:17357379-17357398 | MS.gene72817:CDS | 40.0% | |
| AGAGGAAGAAATTCAACCAG+AGG | + | chr5.1:17357440-17357459 | MS.gene72817:CDS | 40.0% | |
| AGCAGGTTTATGTCAAATCC+AGG | + | chr5.1:17360152-17360171 | MS.gene72817:intron | 40.0% | |
| AGCTCAAGTTTCTCCTTCTT+TGG | - | chr5.1:17358229-17358248 | None:intergenic | 40.0% | |
| AGGCTTACCAAAGAACTTCT+GGG | + | chr5.1:17358609-17358628 | MS.gene72817:intron | 40.0% | |
| ATTCTGCCAATTCCTCTGAT+TGG | - | chr5.1:17359032-17359051 | None:intergenic | 40.0% | |
| ATTTCTATTGACCGAAGACC+TGG | - | chr5.1:17358139-17358158 | None:intergenic | 40.0% | |
| CAAATCCAGGTAAAGCTCAT+TGG | + | chr5.1:17360165-17360184 | MS.gene72817:intron | 40.0% | |
| CAAATGGGTGTATCGAGTAA+AGG | + | chr5.1:17359320-17359339 | MS.gene72817:intron | 40.0% | |
| CACTCAAAAGGAAAACTACC+AGG | + | chr5.1:17358118-17358137 | MS.gene72817:intron | 40.0% | |
| CATTCGAGAACAAAGCACAT+AGG | + | chr5.1:17360551-17360570 | MS.gene72817:intron | 40.0% | |
| CCAGAAGGATTCTCAGAAAA+AGG | + | chr5.1:17359567-17359586 | MS.gene72817:intron | 40.0% | |
| CTCAAGTTTCTCCTTCTTTG+GGG | - | chr5.1:17358227-17358246 | None:intergenic | 40.0% | |
| CTCATTGGGAAGCAGTTAAA+TGG | + | chr5.1:17360180-17360199 | MS.gene72817:intron | 40.0% | |
| CTCTGTATGCAATACTGAAG+AGG | - | chr5.1:17357417-17357436 | None:intergenic | 40.0% | |
| CTGAGAACTACGATGATTTC+TGG | - | chr5.1:17357504-17357523 | None:intergenic | 40.0% | |
| CTTCCAATTGCTGAAGCATA+TGG | - | chr5.1:17360074-17360093 | None:intergenic | 40.0% | |
| CTTGAAGAAGCAACAATGGT+CGG | - | chr5.1:17359712-17359731 | None:intergenic | 40.0% | |
| CTTGTTCACTCTGATGTTTG+GGG | + | chr5.1:17358247-17358266 | MS.gene72817:intron | 40.0% | |
| CTTTGATCTCCAATCAGACA+TGG | + | chr5.1:17359256-17359275 | MS.gene72817:intron | 40.0% | |
| GAAATCAGACGAAGAGAGTT+GGG | + | chr5.1:17357380-17357399 | MS.gene72817:CDS | 40.0% | |
| GAACTAGCTAAGTTACCCAT+GGG | + | chr5.1:17359279-17359298 | MS.gene72817:intron | 40.0% | |
| GAATCAAAAGGCGAAAGATG+AGG | + | chr5.1:17357598-17357617 | MS.gene72817:CDS | 40.0% | |
| GAGGTGATTGTTCTTGAGAT+AGG | - | chr5.1:17360016-17360035 | None:intergenic | 40.0% | |
| GCTCAAGTTTCTCCTTCTTT+GGG | - | chr5.1:17358228-17358247 | None:intergenic | 40.0% | |
| GCTTGTTCACTCTGATGTTT+GGG | + | chr5.1:17358246-17358265 | MS.gene72817:intron | 40.0% | |
| GGAGCATAAAATACCAGAAG+AGG | + | chr5.1:17358687-17358706 | MS.gene72817:intron | 40.0% | |
| GGAGGAAGAAAAAGAACTCA+TGG | + | chr5.1:17360040-17360059 | MS.gene72817:intron | 40.0% | |
| GGTTATGGTGAAGATGAGTT+TGG | + | chr5.1:17358832-17358851 | MS.gene72817:intron | 40.0% | |
| GTATTGCATACAGAGTCAAG+AGG | + | chr5.1:17357422-17357441 | MS.gene72817:CDS | 40.0% | |
| GTGTTGGAATTGTGGAAAGA+CGG | + | chr5.1:17357541-17357560 | MS.gene72817:CDS | 40.0% | |
| GTTTGAAAGCTTCATGCACA+AGG | + | chr5.1:17359665-17359684 | MS.gene72817:intron | 40.0% | |
| TAAGTTACCCATGGGAAAGA+AGG | + | chr5.1:17359287-17359306 | MS.gene72817:intron | 40.0% | |
| TAGATCTCTTCTTGAGGATG+AGG | + | chr5.1:17360592-17360611 | MS.gene72817:intron | 40.0% | |
| TAGGCCATATGAGTGAAAAG+GGG | + | chr5.1:17358083-17358102 | MS.gene72817:intron | 40.0% | |
| TATGAGTGAAAAGGGGATGA+AGG | + | chr5.1:17358090-17358109 | MS.gene72817:intron | 40.0% | |
| TCAAGAACAATCACCTCAGA+CGG | + | chr5.1:17360019-17360038 | MS.gene72817:intron | 40.0% | |
| TCAGCTTACTTAATCAACCG+AGG | + | chr5.1:17358649-17358668 | MS.gene72817:intron | 40.0% | |
| TCTTGTAAGGTTGTGGGAAA+AGG | + | chr5.1:17357794-17357813 | MS.gene72817:intron | 40.0% | |
| TGGAAGTTTGATGTACGCAA+TGG | + | chr5.1:17360088-17360107 | MS.gene72817:intron | 40.0% | |
| TGGTGAAGCTCAATACTATC+AGG | + | chr5.1:17359439-17359458 | MS.gene72817:intron | 40.0% | |
| TGTATCTCTTAGAGCCATCA+TGG | - | chr5.1:17359350-17359369 | None:intergenic | 40.0% | |
| TGTTGGAATTGTGGAAAGAC+GGG | + | chr5.1:17357542-17357561 | MS.gene72817:CDS | 40.0% | |
| TTCTGCCAATTCCTCTGATT+GGG | - | chr5.1:17359031-17359050 | None:intergenic | 40.0% | |
| TTTCAAGAGATGGAAAGCCA+TGG | + | chr5.1:17358384-17358403 | MS.gene72817:intron | 40.0% | |
| TTTCCACTTCATACCTCTTC+TGG | - | chr5.1:17358703-17358722 | None:intergenic | 40.0% | |
| ! | AAGTGCACTTTCATCGGTTA+TGG | + | chr5.1:17358817-17358836 | MS.gene72817:intron | 40.0% |
| ! | ACTTGTCTCATTTTCCACCA+TGG | - | chr5.1:17358404-17358423 | None:intergenic | 40.0% |
| ! | AGAGGTATGAAGTGGAAAAG+AGG | + | chr5.1:17358705-17358724 | MS.gene72817:intron | 40.0% |
| ! | AGCTTGTTCACTCTGATGTT+TGG | + | chr5.1:17358245-17358264 | MS.gene72817:intron | 40.0% |
| ! | ATACCAGAAGAGGTATGAAG+TGG | + | chr5.1:17358697-17358716 | MS.gene72817:intron | 40.0% |
| ! | ATAGTATTGAGCTTCACCAC+TGG | - | chr5.1:17359438-17359457 | None:intergenic | 40.0% |
| ! | ATGATCACTCTAGGAAGGTA+TGG | + | chr5.1:17358323-17358342 | MS.gene72817:intron | 40.0% |
| ! | ATTTCTGGATTTGGATCGTC+TGG | - | chr5.1:17357489-17357508 | None:intergenic | 40.0% |
| ! | CTCAAGATAGAGATTTTCGC+TGG | - | chr5.1:17359484-17359503 | None:intergenic | 40.0% |
| ! | GAAAGTGCACTTCTTGGATT+TGG | - | chr5.1:17358809-17358828 | None:intergenic | 40.0% |
| ! | GAACAATTCTTTCTGGGAAG+TGG | - | chr5.1:17357723-17357742 | None:intergenic | 40.0% |
| ! | GATACTTTTGTCTTCCCTAC+CGG | + | chr5.1:17357265-17357284 | MS.gene72817:CDS | 40.0% |
| ! | GATATGTTCTTTGGAGAGCA+AGG | + | chr5.1:17357658-17357677 | MS.gene72817:intron | 40.0% |
| ! | TCATCCCCTTTTCACTCATA+TGG | - | chr5.1:17358090-17358109 | None:intergenic | 40.0% |
| ! | TCCAAGAAGTGCACTTTCAT+CGG | + | chr5.1:17358811-17358830 | MS.gene72817:intron | 40.0% |
| ! | TGACATGAAGGATTTAGGAC+CGG | + | chr5.1:17359842-17359861 | MS.gene72817:intron | 40.0% |
| ! | TGACGCGTTGATATGTTCTT+TGG | + | chr5.1:17357649-17357668 | MS.gene72817:intron | 40.0% |
| ! | TGATCACTCTAGGAAGGTAT+GGG | + | chr5.1:17358324-17358343 | MS.gene72817:intron | 40.0% |
| ! | TGTTTTCATCATCCCAGAGA+CGG | - | chr5.1:17358861-17358880 | None:intergenic | 40.0% |
| !! | AGAAGGCACTTCACAACAAA+TGG | + | chr5.1:17359304-17359323 | MS.gene72817:intron | 40.0% |
| !! | CCTTTTTCTGAGAATCCTTC+TGG | - | chr5.1:17359570-17359589 | None:intergenic | 40.0% |
| !! | GAAGGCACTTCACAACAAAT+GGG | + | chr5.1:17359305-17359324 | MS.gene72817:intron | 40.0% |
| !! | TCATCATCCTTCATCGATTC+TGG | - | chr5.1:17356960-17356979 | None:intergenic | 40.0% |
| !! | TCGCCTTTTGATTCTTTGCT+GGG | - | chr5.1:17357592-17357611 | None:intergenic | 40.0% |
| !! | TCTATCGAGTGTTGGAATTG+TGG | + | chr5.1:17357533-17357552 | MS.gene72817:CDS | 40.0% |
| !! | TCTGGTTTCTTTTCTGTGAG+AGG | - | chr5.1:17356942-17356961 | None:intergenic | 40.0% |
| !! | TTCGCCTTTTGATTCTTTGC+TGG | - | chr5.1:17357593-17357612 | None:intergenic | 40.0% |
| AAAGGATTCCAGCAGAAGGA+AGG | + | chr5.1:17359387-17359406 | MS.gene72817:intron | 45.0% | |
| AAGTGGAAGAACCCCAAAGA+AGG | + | chr5.1:17358213-17358232 | MS.gene72817:intron | 45.0% | |
| ACAACTGTCTCATCCATTGG+TGG | + | chr5.1:17358274-17358293 | MS.gene72817:intron | 45.0% | |
| AGAGTCAGCTTTCAGACAAG+TGG | + | chr5.1:17358196-17358215 | MS.gene72817:intron | 45.0% | |
| AGATGAGATTCCCCAATCAG+AGG | + | chr5.1:17359017-17359036 | MS.gene72817:CDS | 45.0% | |
| AGCTAGTTCCCATGTCTGAT+TGG | - | chr5.1:17359268-17359287 | None:intergenic | 45.0% | |
| AGTCAATTCCTTCCTTCTGC+TGG | - | chr5.1:17359398-17359417 | None:intergenic | 45.0% | |
| ATGGGTGTATCGAGTAAAGG+AGG | + | chr5.1:17359323-17359342 | MS.gene72817:intron | 45.0% | |
| CAACTGTCTCATCCATTGGT+GGG | + | chr5.1:17358275-17358294 | MS.gene72817:intron | 45.0% | |
| CAAGTGCTTGTCTATCGAGA+AGG | - | chr5.1:17356989-17357008 | None:intergenic | 45.0% | |
| CACCACTGGAGCAAAAATCT+CGG | - | chr5.1:17359424-17359443 | None:intergenic | 45.0% | |
| CAGGCTTACCAAAGAACTTC+TGG | + | chr5.1:17358608-17358627 | MS.gene72817:intron | 45.0% | |
| CCAACAACTGTCTCATCCAT+TGG | + | chr5.1:17358271-17358290 | MS.gene72817:intron | 45.0% | |
| CCAATGGATGAGACAGTTGT+TGG | - | chr5.1:17358274-17358293 | None:intergenic | 45.0% | |
| CGAGCCTGTTTATGTAGAGA+TGG | + | chr5.1:17358972-17358991 | MS.gene72817:CDS | 45.0% | |
| CTCAGCTACACCATTGTGTT+GGG | - | chr5.1:17358539-17358558 | None:intergenic | 45.0% | |
| CTCCAGTTCCCGAATTAAGA+AGG | + | chr5.1:17359091-17359110 | MS.gene72817:CDS | 45.0% | |
| CTGGCACAGTTCTTTCCATT+CGG | - | chr5.1:17358510-17358529 | None:intergenic | 45.0% | |
| CTTAATCAACCGAGGTCCAT+CGG | + | chr5.1:17358657-17358676 | MS.gene72817:intron | 45.0% | |
| CTTAATCTCTGTAGGCCAGT+TGG | + | chr5.1:17357892-17357911 | MS.gene72817:intron | 45.0% | |
| CTTCTCGATAGACAAGCACT+TGG | + | chr5.1:17356987-17357006 | MS.gene72817:CDS | 45.0% | |
| GAAAGCTTCATGCACAAGGA+AGG | + | chr5.1:17359669-17359688 | MS.gene72817:intron | 45.0% | |
| GAAGTAATGCTTCCCACCAA+TGG | - | chr5.1:17358290-17358309 | None:intergenic | 45.0% | |
| GACCTTCTTAATTCGGGAAC+TGG | - | chr5.1:17359096-17359115 | None:intergenic | 45.0% | |
| GATTCCCCAATCAGAGGAAT+TGG | + | chr5.1:17359023-17359042 | MS.gene72817:CDS | 45.0% | |
| GATTGGGGAATCTCATCTGT+GGG | - | chr5.1:17359015-17359034 | None:intergenic | 45.0% | |
| GCTCCCAGCAAAGAATCAAA+AGG | + | chr5.1:17357586-17357605 | MS.gene72817:CDS | 45.0% | |
| GGAAAGAGAATATGGTGTGC+AGG | + | chr5.1:17359589-17359608 | MS.gene72817:intron | 45.0% | |
| GGAACTAGCTAAGTTACCCA+TGG | + | chr5.1:17359278-17359297 | MS.gene72817:intron | 45.0% | |
| GGACCGGCAAAGAAAATTCT+TGG | + | chr5.1:17359858-17359877 | MS.gene72817:intron | 45.0% | |
| GGTACTCTTTACAAGACAGC+TGG | + | chr5.1:17358001-17358020 | MS.gene72817:intron | 45.0% | |
| GTAGAGATGGATGATGTTCC+AGG | + | chr5.1:17358985-17359004 | MS.gene72817:CDS | 45.0% | |
| TAAGAGATACAAAGCCCGAC+TGG | + | chr5.1:17359359-17359378 | MS.gene72817:intron | 45.0% | |
| TACGTAGATGCAGACTTTGC+TGG | + | chr5.1:17360275-17360294 | MS.gene72817:intron | 45.0% | |
| TAGTCAGAGTGCGATACATC+TGG | + | chr5.1:17360511-17360530 | MS.gene72817:intron | 45.0% | |
| TCAGCTACACCATTGTGTTG+GGG | - | chr5.1:17358538-17358557 | None:intergenic | 45.0% | |
| TCTGCCAATTCCTCTGATTG+GGG | - | chr5.1:17359030-17359049 | None:intergenic | 45.0% | |
| TGATGAAGCATGTCAGACCA+CGG | + | chr5.1:17359191-17359210 | MS.gene72817:CDS | 45.0% | |
| TGATTGGGGAATCTCATCTG+TGG | - | chr5.1:17359016-17359035 | None:intergenic | 45.0% | |
| TGCTGAAGCATATGGAATCC+TGG | - | chr5.1:17360066-17360085 | None:intergenic | 45.0% | |
| TTTACCACGTCCATTTCCTC+TGG | - | chr5.1:17357459-17357478 | None:intergenic | 45.0% | |
| TTTACGCTTCGGATGACAGA+AGG | + | chr5.1:17357149-17357168 | MS.gene72817:CDS | 45.0% | |
| ! | ACCGATGAAAGTGCACTTCT+TGG | - | chr5.1:17358815-17358834 | None:intergenic | 45.0% |
| ! | AGGCGAAAATGACTTGCCAA+CGG | - | chr5.1:17359996-17360015 | None:intergenic | 45.0% |
| ! | GATCACCGAAGAAGTACAAC+TGG | + | chr5.1:17360305-17360324 | MS.gene72817:intron | 45.0% |
| ! | TCTTTTTCTTCCTCCGTCTG+AGG | - | chr5.1:17360035-17360054 | None:intergenic | 45.0% |
| ! | TGAAGTGCCTTCTTTCCCAT+GGG | - | chr5.1:17359297-17359316 | None:intergenic | 45.0% |
| ! | TTGGTACTGGAGCAGTTAGT+TGG | + | chr5.1:17360342-17360361 | MS.gene72817:intron | 45.0% |
| !! | TGTTGCTTTATCCACTACGG+AGG | + | chr5.1:17360385-17360404 | MS.gene72817:intron | 45.0% |
| AACACAACCACCAACGACTC+AGG | + | chr5.1:17358943-17358962 | MS.gene72817:intron | 50.0% | |
| AACCTTCATAAGACCAGCGG+TGG | - | chr5.1:17357069-17357088 | None:intergenic | 50.0% | |
| AAGCTCAGAACCGACAATGG+TGG | + | chr5.1:17358436-17358455 | MS.gene72817:intron | 50.0% | |
| AAGTTCGATGGTGCGGACTT+TGG | + | chr5.1:17356864-17356883 | MS.gene72817:CDS | 50.0% | |
| AATGGTCGGCATTGCACTTC+TGG | - | chr5.1:17359698-17359717 | None:intergenic | 50.0% | |
| ACAGTAGCGCTCCAACTATC+CGG | - | chr5.1:17357287-17357306 | None:intergenic | 50.0% | |
| AGAACAATCACCTCAGACGG+AGG | + | chr5.1:17360022-17360041 | MS.gene72817:intron | 50.0% | |
| AGACCACGGATGCTAGTAAG+TGG | + | chr5.1:17359205-17359224 | MS.gene72817:intron | 50.0% | |
| ATAGCTCGCGGTAGAAAGAG+TGG | + | chr5.1:17357980-17357999 | MS.gene72817:intron | 50.0% | |
| ATCTCATCTGTGGGACTTCC+TGG | - | chr5.1:17359006-17359025 | None:intergenic | 50.0% | |
| ATGAGTTTGGCTACCGTCTC+TGG | + | chr5.1:17358845-17358864 | MS.gene72817:intron | 50.0% | |
| ATGCAGTGGGAGTTGTTAGC+AGG | + | chr5.1:17360135-17360154 | MS.gene72817:intron | 50.0% | |
| ATGGCCTGAAACAAGCTCCA+AGG | + | chr5.1:17359628-17359647 | MS.gene72817:intron | 50.0% | |
| CAAGAGATGGAAAGCCATGG+TGG | + | chr5.1:17358387-17358406 | MS.gene72817:intron | 50.0% | |
| CAGTCTTCCACGGTGATGAT+TGG | + | chr5.1:17357933-17357952 | MS.gene72817:intron | 50.0% | |
| CGAATGGAAAGAACTGTGCC+AGG | + | chr5.1:17358508-17358527 | MS.gene72817:intron | 50.0% | |
| CGAGTAAAGGAGGACCATGA+TGG | + | chr5.1:17359333-17359352 | MS.gene72817:intron | 50.0% | |
| GAATCCTTTGACCACCAGTC+GGG | - | chr5.1:17359376-17359395 | None:intergenic | 50.0% | |
| GACCACGGATGCTAGTAAGT+GGG | + | chr5.1:17359206-17359225 | MS.gene72817:intron | 50.0% | |
| GAGTCTTGGGTGTTAGACTC+TGG | + | chr5.1:17357683-17357702 | MS.gene72817:intron | 50.0% | |
| GCAAAAGAGAAAACCACCGC+TGG | + | chr5.1:17357053-17357072 | MS.gene72817:CDS | 50.0% | |
| GCTCAGCTACACCATTGTGT+TGG | - | chr5.1:17358540-17358559 | None:intergenic | 50.0% | |
| GCTTCCCAATGAGCTTTACC+TGG | - | chr5.1:17360173-17360192 | None:intergenic | 50.0% | |
| GCTTCTGCCCAGAAGTTCTT+TGG | - | chr5.1:17358619-17358638 | None:intergenic | 50.0% | |
| GGAACTGGAGTATGATGCAC+TGG | - | chr5.1:17359081-17359100 | None:intergenic | 50.0% | |
| GGAATCCTTTGACCACCAGT+CGG | - | chr5.1:17359377-17359396 | None:intergenic | 50.0% | |
| GGAGAGCAAGGAAGAGTCTT+GGG | + | chr5.1:17357670-17357689 | MS.gene72817:intron | 50.0% | |
| GGCTACACAACAGTCTTCCA+CGG | + | chr5.1:17357923-17357942 | MS.gene72817:intron | 50.0% | |
| GGTCAAAGGATTCCAGCAGA+AGG | + | chr5.1:17359383-17359402 | MS.gene72817:intron | 50.0% | |
| TACATACTCAGCCTCCGTAG+TGG | - | chr5.1:17360399-17360418 | None:intergenic | 50.0% | |
| TCAACCAGAGGAAATGGACG+TGG | + | chr5.1:17357452-17357471 | MS.gene72817:CDS | 50.0% | |
| TGAAACAAGCTCCAAGGCAG+TGG | + | chr5.1:17359634-17359653 | MS.gene72817:intron | 50.0% | |
| TGAGGCGGTTGTTTACGCTT+CGG | + | chr5.1:17357138-17357157 | MS.gene72817:CDS | 50.0% | |
| TGAGTTTGGCTACCGTCTCT+GGG | + | chr5.1:17358846-17358865 | MS.gene72817:intron | 50.0% | |
| TGCTAACAACTCCCACTGCA+TGG | - | chr5.1:17360136-17360155 | None:intergenic | 50.0% | |
| TGGAGAGCAAGGAAGAGTCT+TGG | + | chr5.1:17357669-17357688 | MS.gene72817:intron | 50.0% | |
| TGTACGCAATGGTCTGTACG+AGG | + | chr5.1:17360099-17360118 | MS.gene72817:intron | 50.0% | |
| TGTCTTCCCTACCGGATAGT+TGG | + | chr5.1:17357273-17357292 | MS.gene72817:CDS | 50.0% | |
| TTATGAGCACGGGATCCGAA+TGG | + | chr5.1:17358492-17358511 | MS.gene72817:intron | 50.0% | |
| ! | AATGTTGCTTCCACCTCAGG+AGG | + | chr5.1:17357623-17357642 | MS.gene72817:CDS | 50.0% |
| ! | ACTGCCTTGGAGCTTGTTTC+AGG | - | chr5.1:17359635-17359654 | None:intergenic | 50.0% |
| ! | CACCGAGATTTTTGCTCCAG+TGG | + | chr5.1:17359419-17359438 | MS.gene72817:intron | 50.0% |
| ! | GCAAATGTTGCTTCCACCTC+AGG | + | chr5.1:17357620-17357639 | MS.gene72817:CDS | 50.0% |
| ! | GTGAAGTGCCTTCTTTCCCA+TGG | - | chr5.1:17359298-17359317 | None:intergenic | 50.0% |
| ! | TGATGCACTGGTGTGTCAGA+CGG | - | chr5.1:17359069-17359088 | None:intergenic | 50.0% |
| ! | TTATGCTCCAATGGCACCGA+TGG | - | chr5.1:17358676-17358695 | None:intergenic | 50.0% |
| !! | AACCACCGCTGGTCTTATGA+AGG | + | chr5.1:17357064-17357083 | MS.gene72817:CDS | 50.0% |
| !!! | ATGGTGCGGACTTTGGCTTT+TGG | + | chr5.1:17356871-17356890 | MS.gene72817:CDS | 50.0% |
| AAAGCCCGACTGGTGGTCAA+AGG | + | chr5.1:17359369-17359388 | MS.gene72817:intron | 55.0% | |
| ACAGCTGTGAGTAGCTCCTC+AGG | + | chr5.1:17357308-17357327 | MS.gene72817:CDS | 55.0% | |
| AGAAGCTTGCGTGTGCAGTC+AGG | + | chr5.1:17358589-17358608 | MS.gene72817:intron | 55.0% | |
| AGCGCTCCAACTATCCGGTA+GGG | - | chr5.1:17357282-17357301 | None:intergenic | 55.0% | |
| CAAACCGGTTAGCACACCGT+TGG | + | chr5.1:17359977-17359996 | MS.gene72817:intron | 55.0% | |
| CAACATGGGCGATGCCAAAC+CGG | + | chr5.1:17359962-17359981 | MS.gene72817:intron | 55.0% | |
| CAACGGTGTGCTAACCGGTT+TGG | - | chr5.1:17359979-17359998 | None:intergenic | 55.0% | |
| CCAGACATTGGCCATGCAGT+GGG | + | chr5.1:17360122-17360141 | MS.gene72817:intron | 55.0% | |
| CTCCCACTTACTAGCATCCG+TGG | - | chr5.1:17359211-17359230 | None:intergenic | 55.0% | |
| CTCGCTCAATCCTGAGTCGT+TGG | - | chr5.1:17358956-17358975 | None:intergenic | 55.0% | |
| CTTGCCAACGGTGTGCTAAC+CGG | - | chr5.1:17359984-17360003 | None:intergenic | 55.0% | |
| GAGATACAAAGCCCGACTGG+TGG | + | chr5.1:17359362-17359381 | MS.gene72817:intron | 55.0% | |
| GCTCAATCCTGAGTCGTTGG+TGG | - | chr5.1:17358953-17358972 | None:intergenic | 55.0% | |
| GGTGCAATGACGATAGCTCG+CGG | + | chr5.1:17357968-17357987 | MS.gene72817:intron | 55.0% | |
| GTCTGTACGAGGCCAGACAT+TGG | + | chr5.1:17360110-17360129 | MS.gene72817:intron | 55.0% | |
| TAGCGCTCCAACTATCCGGT+AGG | - | chr5.1:17357283-17357302 | None:intergenic | 55.0% | |
| TGACTGCACACGCAAGCTTC+TGG | - | chr5.1:17358590-17358609 | None:intergenic | 55.0% | |
| TGTAGCCTTCGTCAGCCAAC+TGG | - | chr5.1:17357910-17357929 | None:intergenic | 55.0% | |
| ! | GATGACAGAAGGCGCATCAG+TGG | + | chr5.1:17357160-17357179 | MS.gene72817:CDS | 55.0% |
| CCAGGCACTCCCCAACACAA+TGG | + | chr5.1:17358526-17358545 | MS.gene72817:intron | 60.0% | |
| CCCACTGCATGGCCAATGTC+TGG | - | chr5.1:17360125-17360144 | None:intergenic | 60.0% | |
| GCCAGACATTGGCCATGCAG+TGG | + | chr5.1:17360121-17360140 | MS.gene72817:intron | 60.0% | |
| GTAGGCCAGTTGGCTGACGA+AGG | + | chr5.1:17357902-17357921 | MS.gene72817:intron | 60.0% | |
| GTTGCTTCCACCTCAGGAGG+AGG | + | chr5.1:17357626-17357645 | MS.gene72817:CDS | 60.0% | |
| !! | CCAATGGCACCGATGGACCT+CGG | - | chr5.1:17358669-17358688 | None:intergenic | 60.0% |
| !! | CCATTGTGTTGGGGAGTGCC+TGG | - | chr5.1:17358529-17358548 | None:intergenic | 60.0% |
| CAACGCGTCACCTCCTCCTG+AGG | - | chr5.1:17357639-17357658 | None:intergenic | 65.0% | |
| !! | CCGAGGTCCATCGGTGCCAT+TGG | + | chr5.1:17358666-17358685 | MS.gene72817:intron | 65.0% |
| CGCGTCACCTCCTCCTGAGG+TGG | - | chr5.1:17357636-17357655 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 17356831 | 17360727 | 17356831 | ID=MS.gene72817 |
| chr5.1 | mRNA | 17356831 | 17360727 | 17356831 | ID=MS.gene72817.t1;Parent=MS.gene72817 |
| chr5.1 | exon | 17356831 | 17357647 | 17356831 | ID=MS.gene72817.t1.exon1;Parent=MS.gene72817.t1 |
| chr5.1 | CDS | 17356831 | 17357647 | 17356831 | ID=cds.MS.gene72817.t1;Parent=MS.gene72817.t1 |
| chr5.1 | exon | 17358965 | 17359219 | 17358965 | ID=MS.gene72817.t1.exon2;Parent=MS.gene72817.t1 |
| chr5.1 | CDS | 17358965 | 17359219 | 17358965 | ID=cds.MS.gene72817.t1;Parent=MS.gene72817.t1 |
| chr5.1 | exon | 17360639 | 17360727 | 17360639 | ID=MS.gene72817.t1.exon3;Parent=MS.gene72817.t1 |
| chr5.1 | CDS | 17360639 | 17360727 | 17360639 | ID=cds.MS.gene72817.t1;Parent=MS.gene72817.t1 |
| Gene Sequence |
| Protein sequence |
