Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74138.t1 | GAU33112.1 | 88.4 | 303 | 35 | 0 | 1 | 303 | 9 | 311 | 2.30E-153 | 551.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74138.t1 | P09189 | 74.9 | 303 | 74 | 1 | 1 | 303 | 1 | 301 | 5.2e-130 | 465.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74138.t1 | A0A2Z6N8I6 | 88.4 | 303 | 35 | 0 | 1 | 303 | 9 | 311 | 1.6e-153 | 551.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene74138 | 0.827723 | 1.34E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene74138 | 0.803969 | 2.70E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene74138 | 0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene74138 | 0.808339 | 3.25E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene74138 | 0.809292 | 2.03E-50 | -1.69E-46 |
| MS.gene05191 | MS.gene74138 | 0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene74138 | -0.804243 | 2.37E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene74138 | 0.827281 | 1.71E-54 | -1.69E-46 |
| MS.gene055103 | MS.gene74138 | 0.801141 | 1.04E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene74138 | 0.807249 | 5.54E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene74138 | 0.815013 | 1.15E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene74138 | 0.805492 | 1.30E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene74138 | 0.829409 | 5.23E-55 | -1.69E-46 |
| MS.gene057444 | MS.gene74138 | 0.810444 | 1.15E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene74138 | 0.802592 | 5.21E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene74138 | 0.80167 | 8.07E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene74138 | 0.814112 | 1.82E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene74138 | 0.809741 | 1.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74138.t1 | MTR_7g025760 | 88.449 | 303 | 35 | 0 | 1 | 303 | 1 | 303 | 0.0 | 570 |
| MS.gene74138.t1 | MTR_8g032650 | 88.119 | 303 | 36 | 0 | 1 | 303 | 1 | 303 | 0.0 | 560 |
| MS.gene74138.t1 | MTR_7g025740 | 86.799 | 303 | 40 | 0 | 1 | 303 | 1 | 303 | 0.0 | 556 |
| MS.gene74138.t1 | MTR_7g025620 | 85.149 | 303 | 45 | 0 | 1 | 303 | 1 | 303 | 0.0 | 550 |
| MS.gene74138.t1 | MTR_7g025720 | 87.459 | 303 | 38 | 0 | 1 | 303 | 1 | 303 | 0.0 | 546 |
| MS.gene74138.t1 | MTR_7g025630 | 87.129 | 303 | 25 | 2 | 1 | 303 | 1 | 289 | 0.0 | 536 |
| MS.gene74138.t1 | MTR_7g026030 | 82.838 | 303 | 52 | 0 | 1 | 303 | 1 | 303 | 0.0 | 533 |
| MS.gene74138.t1 | MTR_7g025820 | 80.198 | 303 | 60 | 0 | 1 | 303 | 1 | 303 | 0.0 | 526 |
| MS.gene74138.t1 | MTR_7g024030 | 81.395 | 301 | 56 | 0 | 1 | 301 | 1 | 301 | 0.0 | 524 |
| MS.gene74138.t1 | MTR_7g025790 | 79.734 | 301 | 61 | 0 | 1 | 301 | 1 | 301 | 0.0 | 514 |
| MS.gene74138.t1 | MTR_7g078190 | 80.921 | 304 | 57 | 1 | 1 | 303 | 1 | 304 | 2.18e-179 | 509 |
| MS.gene74138.t1 | MTR_7g026090 | 76.898 | 303 | 70 | 0 | 1 | 303 | 1 | 303 | 4.04e-175 | 498 |
| MS.gene74138.t1 | MTR_2g032160 | 73.927 | 303 | 79 | 0 | 1 | 303 | 1 | 303 | 1.91e-173 | 488 |
| MS.gene74138.t1 | MTR_7g026170 | 75.578 | 303 | 74 | 0 | 1 | 303 | 1 | 303 | 7.78e-173 | 493 |
| MS.gene74138.t1 | MTR_2g032580 | 75.083 | 301 | 75 | 0 | 1 | 301 | 1 | 301 | 2.08e-172 | 490 |
| MS.gene74138.t1 | MTR_7g078210 | 80.528 | 303 | 59 | 0 | 1 | 303 | 1 | 303 | 9.00e-172 | 490 |
| MS.gene74138.t1 | MTR_2g038260 | 74.587 | 303 | 77 | 0 | 1 | 303 | 1 | 303 | 2.19e-171 | 489 |
| MS.gene74138.t1 | MTR_2g032550 | 75.329 | 304 | 74 | 1 | 1 | 303 | 1 | 304 | 2.81e-171 | 488 |
| MS.gene74138.t1 | MTR_7g026110 | 75.578 | 303 | 73 | 1 | 1 | 303 | 1 | 302 | 1.41e-170 | 486 |
| MS.gene74138.t1 | MTR_7g021440 | 74.587 | 303 | 77 | 0 | 1 | 303 | 1 | 303 | 4.29e-170 | 485 |
| MS.gene74138.t1 | MTR_5g066800 | 72.930 | 314 | 74 | 1 | 1 | 303 | 1 | 314 | 2.18e-169 | 484 |
| MS.gene74138.t1 | MTR_7g035155 | 73.267 | 303 | 81 | 0 | 1 | 303 | 1 | 303 | 3.78e-169 | 481 |
| MS.gene74138.t1 | MTR_7g099680 | 75.908 | 303 | 71 | 1 | 1 | 303 | 1 | 301 | 1.12e-168 | 483 |
| MS.gene74138.t1 | MTR_7g029415 | 74.751 | 301 | 74 | 1 | 3 | 303 | 12 | 310 | 3.94e-168 | 481 |
| MS.gene74138.t1 | MTR_2g437440 | 74.257 | 303 | 78 | 0 | 1 | 303 | 1 | 303 | 1.28e-167 | 478 |
| MS.gene74138.t1 | MTR_7g026130 | 74.587 | 303 | 77 | 0 | 1 | 303 | 1 | 303 | 2.97e-167 | 481 |
| MS.gene74138.t1 | MTR_7g024390 | 75.415 | 301 | 72 | 1 | 1 | 301 | 1 | 299 | 1.27e-166 | 478 |
| MS.gene74138.t1 | MTR_4g063720 | 74.419 | 301 | 75 | 1 | 1 | 301 | 1 | 299 | 1.64e-164 | 472 |
| MS.gene74138.t1 | MTR_7g024580 | 74.419 | 301 | 75 | 1 | 1 | 301 | 1 | 299 | 2.86e-164 | 471 |
| MS.gene74138.t1 | MTR_7g451380 | 71.947 | 303 | 85 | 0 | 1 | 303 | 1 | 303 | 3.95e-164 | 470 |
| MS.gene74138.t1 | MTR_4g130540 | 74.751 | 301 | 73 | 2 | 1 | 301 | 1 | 298 | 5.12e-164 | 471 |
| MS.gene74138.t1 | MTR_4g063710 | 73.754 | 301 | 77 | 1 | 1 | 301 | 1 | 299 | 6.69e-164 | 471 |
| MS.gene74138.t1 | MTR_7g025770 | 71.947 | 303 | 85 | 0 | 1 | 303 | 1 | 303 | 2.49e-163 | 468 |
| MS.gene74138.t1 | MTR_1g077230 | 76.241 | 282 | 67 | 0 | 1 | 282 | 1 | 282 | 3.69e-162 | 453 |
| MS.gene74138.t1 | MTR_4g079590 | 70.957 | 303 | 88 | 0 | 1 | 303 | 1 | 303 | 6.34e-161 | 462 |
| MS.gene74138.t1 | MTR_7g011590 | 71.287 | 303 | 75 | 1 | 1 | 303 | 1 | 291 | 5.84e-159 | 456 |
| MS.gene74138.t1 | MTR_2g022050 | 73.597 | 303 | 80 | 0 | 1 | 303 | 1 | 303 | 2.09e-158 | 456 |
| MS.gene74138.t1 | MTR_7g007000 | 68.977 | 303 | 76 | 1 | 1 | 303 | 1 | 285 | 7.78e-154 | 443 |
| MS.gene74138.t1 | MTR_7g026140 | 69.307 | 303 | 77 | 1 | 1 | 303 | 1 | 287 | 8.85e-154 | 444 |
| MS.gene74138.t1 | MTR_4g027145 | 67.937 | 315 | 89 | 2 | 1 | 303 | 1 | 315 | 1.66e-152 | 441 |
| MS.gene74138.t1 | MTR_8g103930 | 68.790 | 314 | 69 | 4 | 1 | 301 | 1 | 298 | 1.77e-152 | 440 |
| MS.gene74138.t1 | MTR_6g033760 | 69.637 | 303 | 90 | 1 | 1 | 303 | 1 | 301 | 2.98e-150 | 435 |
| MS.gene74138.t1 | MTR_2g038270 | 66.667 | 312 | 94 | 2 | 1 | 303 | 1 | 311 | 1.61e-149 | 433 |
| MS.gene74138.t1 | MTR_6g033850 | 68.977 | 303 | 92 | 1 | 1 | 303 | 1 | 301 | 8.14e-147 | 428 |
| MS.gene74138.t1 | MTR_7g025260 | 78.431 | 255 | 53 | 1 | 51 | 303 | 21 | 275 | 1.06e-145 | 422 |
| MS.gene74138.t1 | MTR_7g074460 | 67.987 | 303 | 79 | 1 | 1 | 303 | 1 | 285 | 7.85e-145 | 420 |
| MS.gene74138.t1 | MTR_2g040370 | 72.333 | 300 | 79 | 2 | 2 | 301 | 1022 | 1317 | 1.33e-144 | 446 |
| MS.gene74138.t1 | MTR_2g040370 | 69.103 | 301 | 88 | 3 | 2 | 301 | 1406 | 1702 | 5.95e-136 | 422 |
| MS.gene74138.t1 | MTR_2g040370 | 72.333 | 300 | 79 | 2 | 2 | 301 | 1022 | 1317 | 2.03e-144 | 446 |
| MS.gene74138.t1 | MTR_2g040370 | 69.103 | 301 | 88 | 3 | 2 | 301 | 1406 | 1702 | 8.83e-136 | 422 |
| MS.gene74138.t1 | MTR_6g033955 | 68.919 | 296 | 90 | 1 | 8 | 303 | 8 | 301 | 8.67e-144 | 419 |
| MS.gene74138.t1 | MTR_6g033870 | 68.243 | 296 | 93 | 1 | 8 | 303 | 9 | 303 | 7.63e-142 | 416 |
| MS.gene74138.t1 | MTR_2g040160 | 68.317 | 303 | 92 | 2 | 1 | 303 | 1101 | 1399 | 4.35e-138 | 425 |
| MS.gene74138.t1 | MTR_2g040260 | 66.667 | 303 | 97 | 2 | 1 | 303 | 1030 | 1328 | 8.79e-138 | 424 |
| MS.gene74138.t1 | MTR_6g033820 | 66.007 | 303 | 101 | 1 | 1 | 303 | 1 | 301 | 1.37e-137 | 404 |
| MS.gene74138.t1 | MTR_1g017130 | 72.137 | 262 | 73 | 0 | 1 | 262 | 1 | 262 | 9.42e-137 | 400 |
| MS.gene74138.t1 | MTR_7g026080 | 73.469 | 245 | 65 | 0 | 1 | 245 | 1 | 245 | 1.53e-135 | 384 |
| MS.gene74138.t1 | MTR_7g451360 | 63.036 | 303 | 82 | 1 | 1 | 303 | 1 | 273 | 1.70e-133 | 390 |
| MS.gene74138.t1 | MTR_2g017730 | 64.407 | 295 | 101 | 2 | 9 | 301 | 8 | 300 | 1.28e-132 | 389 |
| MS.gene74138.t1 | MTR_2g040350 | 66.118 | 304 | 95 | 4 | 2 | 301 | 813 | 1112 | 1.03e-131 | 404 |
| MS.gene74138.t1 | MTR_2g040350 | 66.118 | 304 | 95 | 4 | 2 | 301 | 1031 | 1330 | 1.94e-130 | 404 |
| MS.gene74138.t1 | MTR_2g040220 | 63.934 | 305 | 106 | 2 | 1 | 303 | 1010 | 1312 | 1.37e-129 | 403 |
| MS.gene74138.t1 | MTR_4g088515 | 71.260 | 254 | 55 | 1 | 9 | 262 | 276 | 511 | 2.21e-126 | 374 |
| MS.gene74138.t1 | MTR_2g031670 | 71.111 | 225 | 65 | 0 | 21 | 245 | 43 | 267 | 5.66e-119 | 345 |
| MS.gene74138.t1 | MTR_1g041565 | 61.074 | 298 | 63 | 4 | 6 | 303 | 2 | 246 | 3.62e-118 | 350 |
| MS.gene74138.t1 | MTR_8g099945 | 58.923 | 297 | 115 | 4 | 7 | 302 | 36 | 326 | 1.24e-116 | 350 |
| MS.gene74138.t1 | MTR_8g099795 | 59.259 | 297 | 114 | 4 | 7 | 302 | 36 | 326 | 4.88e-116 | 349 |
| MS.gene74138.t1 | MTR_4g063720 | 71.681 | 226 | 62 | 1 | 1 | 226 | 1 | 224 | 1.46e-112 | 337 |
| MS.gene74138.t1 | MTR_6g033800 | 66.029 | 209 | 71 | 0 | 95 | 303 | 4 | 212 | 7.10e-94 | 289 |
| MS.gene74138.t1 | MTR_5g097190 | 56.574 | 251 | 62 | 3 | 3 | 253 | 152 | 355 | 3.23e-91 | 276 |
| MS.gene74138.t1 | MTR_6g478100 | 63.679 | 212 | 63 | 2 | 38 | 249 | 10 | 207 | 4.13e-88 | 266 |
| MS.gene74138.t1 | MTR_2g010020 | 51.568 | 287 | 126 | 5 | 10 | 295 | 57 | 331 | 1.82e-87 | 275 |
| MS.gene74138.t1 | MTR_2g010020 | 51.568 | 287 | 126 | 5 | 10 | 295 | 58 | 332 | 1.86e-87 | 275 |
| MS.gene74138.t1 | MTR_4g092920 | 49.129 | 287 | 134 | 4 | 10 | 295 | 54 | 329 | 3.00e-87 | 275 |
| MS.gene74138.t1 | MTR_1207s0010 | 66.854 | 178 | 58 | 1 | 109 | 286 | 2 | 178 | 2.54e-81 | 244 |
| MS.gene74138.t1 | MTR_2g005690 | 48.630 | 292 | 139 | 5 | 10 | 300 | 72 | 353 | 4.62e-77 | 248 |
| MS.gene74138.t1 | MTR_6g034005 | 52.995 | 217 | 100 | 2 | 82 | 298 | 2 | 216 | 4.15e-70 | 230 |
| MS.gene74138.t1 | MTR_7g026180 | 69.697 | 132 | 37 | 1 | 78 | 209 | 23 | 151 | 2.52e-59 | 193 |
| MS.gene74138.t1 | MTR_4g012050 | 37.979 | 287 | 175 | 2 | 10 | 295 | 4 | 288 | 1.79e-58 | 201 |
| MS.gene74138.t1 | MTR_4g092920 | 49.010 | 202 | 94 | 2 | 94 | 295 | 3 | 195 | 2.35e-58 | 196 |
| MS.gene74138.t1 | MTR_2g102180 | 36.934 | 287 | 178 | 2 | 10 | 295 | 4 | 288 | 4.39e-58 | 200 |
| MS.gene74138.t1 | MTR_6g033810 | 47.706 | 218 | 64 | 2 | 88 | 303 | 8 | 177 | 6.35e-58 | 188 |
| MS.gene74138.t1 | MTR_6g033910 | 47.847 | 209 | 58 | 3 | 74 | 280 | 19 | 178 | 9.11e-55 | 176 |
| MS.gene74138.t1 | MTR_5g092570 | 34.843 | 287 | 184 | 2 | 10 | 295 | 4 | 288 | 6.15e-50 | 176 |
| MS.gene74138.t1 | MTR_3g051300 | 33.798 | 287 | 187 | 2 | 10 | 295 | 4 | 288 | 6.33e-50 | 176 |
| MS.gene74138.t1 | MTR_6g033855 | 47.826 | 184 | 46 | 2 | 88 | 269 | 8 | 143 | 8.51e-46 | 157 |
| MS.gene74138.t1 | MTR_5g005890 | 36.564 | 227 | 93 | 4 | 74 | 299 | 5 | 181 | 3.14e-43 | 146 |
| MS.gene74138.t1 | MTR_4g027235 | 74.667 | 75 | 19 | 0 | 1 | 75 | 1 | 75 | 1.92e-36 | 125 |
| MS.gene74138.t1 | MTR_4g027085 | 74.667 | 75 | 19 | 0 | 1 | 75 | 1 | 75 | 1.92e-36 | 125 |
| MS.gene74138.t1 | MTR_5g006180 | 31.438 | 299 | 184 | 8 | 8 | 293 | 28 | 318 | 1.96e-35 | 134 |
| MS.gene74138.t1 | MTR_3g081170 | 27.974 | 311 | 204 | 6 | 10 | 303 | 27 | 334 | 1.76e-34 | 133 |
| MS.gene74138.t1 | MTR_6g033805 | 75.342 | 73 | 16 | 1 | 1 | 73 | 1 | 71 | 3.91e-31 | 112 |
| MS.gene74138.t1 | MTR_5g090110 | 28.526 | 312 | 183 | 10 | 5 | 302 | 24 | 309 | 1.96e-26 | 108 |
| MS.gene74138.t1 | MTR_4g115780 | 30.818 | 318 | 189 | 12 | 8 | 302 | 139 | 448 | 3.45e-25 | 105 |
| MS.gene74138.t1 | MTR_7g026095 | 67.692 | 65 | 20 | 1 | 86 | 150 | 187 | 250 | 1.74e-21 | 93.2 |
| MS.gene74138.t1 | MTR_7g021430 | 47.253 | 91 | 45 | 1 | 215 | 302 | 1 | 91 | 2.57e-20 | 87.0 |
| MS.gene74138.t1 | MTR_4g107920 | 26.316 | 304 | 195 | 10 | 8 | 295 | 19 | 309 | 1.24e-18 | 86.3 |
| MS.gene74138.t1 | MTR_7g026050 | 57.627 | 59 | 25 | 0 | 245 | 303 | 1 | 59 | 2.44e-16 | 79.0 |
| MS.gene74138.t1 | MTR_7g025680 | 87.879 | 33 | 4 | 0 | 10 | 42 | 10 | 42 | 3.91e-14 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74138.t1 | AT5G02500 | 74.257 | 303 | 76 | 1 | 1 | 303 | 1 | 301 | 1.27e-167 | 476 |
| MS.gene74138.t1 | AT3G12580 | 76.080 | 301 | 70 | 1 | 1 | 301 | 1 | 299 | 1.96e-167 | 480 |
| MS.gene74138.t1 | AT3G09440 | 75.748 | 301 | 71 | 1 | 1 | 301 | 1 | 299 | 2.03e-166 | 477 |
| MS.gene74138.t1 | AT3G09440 | 75.748 | 301 | 71 | 1 | 1 | 301 | 1 | 299 | 2.03e-166 | 477 |
| MS.gene74138.t1 | AT3G09440 | 75.748 | 301 | 71 | 1 | 1 | 301 | 1 | 299 | 2.03e-166 | 477 |
| MS.gene74138.t1 | AT3G09440 | 75.748 | 301 | 71 | 1 | 1 | 301 | 1 | 299 | 2.03e-166 | 477 |
| MS.gene74138.t1 | AT5G02500 | 74.257 | 303 | 76 | 1 | 1 | 303 | 1 | 301 | 5.95e-166 | 476 |
| MS.gene74138.t1 | AT5G02490 | 74.587 | 303 | 75 | 1 | 1 | 303 | 1 | 301 | 6.84e-166 | 476 |
| MS.gene74138.t1 | AT1G56410 | 74.257 | 303 | 76 | 1 | 1 | 303 | 1 | 301 | 1.76e-165 | 474 |
| MS.gene74138.t1 | AT1G16030 | 72.093 | 301 | 81 | 2 | 1 | 301 | 1 | 298 | 9.33e-157 | 452 |
| MS.gene74138.t1 | AT1G09080 | 60.811 | 296 | 110 | 3 | 7 | 302 | 40 | 329 | 3.24e-122 | 365 |
| MS.gene74138.t1 | AT1G09080 | 60.811 | 296 | 110 | 3 | 7 | 302 | 50 | 339 | 4.53e-122 | 365 |
| MS.gene74138.t1 | AT5G28540 | 60.403 | 298 | 111 | 4 | 7 | 303 | 35 | 326 | 5.33e-120 | 359 |
| MS.gene74138.t1 | AT5G42020 | 60.269 | 297 | 111 | 4 | 7 | 302 | 35 | 325 | 1.28e-119 | 356 |
| MS.gene74138.t1 | AT5G42020 | 60.269 | 297 | 111 | 4 | 7 | 302 | 35 | 325 | 2.82e-119 | 357 |
| MS.gene74138.t1 | AT5G42020 | 60.067 | 298 | 112 | 4 | 7 | 303 | 40 | 331 | 5.24e-119 | 357 |
| MS.gene74138.t1 | AT4G37910 | 49.477 | 287 | 133 | 4 | 10 | 295 | 55 | 330 | 2.94e-86 | 272 |
| MS.gene74138.t1 | AT4G37910 | 49.477 | 287 | 133 | 4 | 10 | 295 | 55 | 330 | 2.94e-86 | 272 |
| MS.gene74138.t1 | AT5G09590 | 50.174 | 287 | 131 | 4 | 10 | 295 | 60 | 335 | 4.09e-85 | 269 |
| MS.gene74138.t1 | AT4G24280 | 48.084 | 287 | 138 | 5 | 10 | 295 | 81 | 357 | 8.84e-75 | 243 |
| MS.gene74138.t1 | AT5G49910 | 47.260 | 292 | 143 | 5 | 10 | 300 | 81 | 362 | 1.36e-74 | 242 |
| MS.gene74138.t1 | AT1G79930 | 38.676 | 287 | 173 | 2 | 10 | 295 | 4 | 288 | 2.45e-61 | 208 |
| MS.gene74138.t1 | AT1G79930 | 38.676 | 287 | 173 | 2 | 10 | 295 | 4 | 288 | 4.51e-61 | 208 |
| MS.gene74138.t1 | AT1G79920 | 38.328 | 287 | 174 | 2 | 10 | 295 | 4 | 288 | 3.15e-60 | 204 |
| MS.gene74138.t1 | AT1G79920 | 38.328 | 287 | 174 | 2 | 10 | 295 | 4 | 288 | 3.68e-60 | 204 |
| MS.gene74138.t1 | AT1G79920 | 38.328 | 287 | 174 | 2 | 10 | 295 | 4 | 288 | 3.68e-60 | 204 |
| MS.gene74138.t1 | AT1G79920 | 38.328 | 287 | 174 | 2 | 10 | 295 | 4 | 288 | 3.68e-60 | 204 |
| MS.gene74138.t1 | AT1G11660 | 36.519 | 293 | 182 | 2 | 10 | 300 | 4 | 294 | 8.10e-58 | 198 |
| MS.gene74138.t1 | AT1G11660 | 36.519 | 293 | 182 | 2 | 10 | 300 | 4 | 294 | 8.10e-58 | 198 |
| MS.gene74138.t1 | AT1G11660 | 36.519 | 293 | 182 | 2 | 10 | 300 | 4 | 294 | 8.10e-58 | 198 |
| MS.gene74138.t1 | AT1G11660 | 38.672 | 256 | 155 | 1 | 47 | 300 | 2 | 257 | 2.61e-51 | 180 |
| MS.gene74138.t1 | AT4G16660 | 27.619 | 315 | 207 | 7 | 6 | 303 | 47 | 357 | 9.20e-35 | 134 |
| MS.gene74138.t1 | AT4G16660 | 27.619 | 315 | 207 | 7 | 6 | 303 | 23 | 333 | 1.15e-34 | 133 |
| MS.gene74138.t1 | AT2G32120 | 30.405 | 296 | 180 | 8 | 8 | 293 | 29 | 308 | 5.27e-29 | 116 |
| MS.gene74138.t1 | AT2G32120 | 30.405 | 296 | 180 | 8 | 8 | 293 | 29 | 308 | 5.27e-29 | 116 |
Find 59 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAACCTCCTCAAGGCTTT+TGG | 0.126998 | 7.4:-75474529 | None:intergenic |
| AACCCAATCAACACTGTATT+TGG | 0.172484 | 7.4:+75473515 | MS.gene74138:CDS |
| GCAGATGCAAAGAGGTTAAT+TGG | 0.250254 | 7.4:+75473953 | MS.gene74138:intron |
| GCACCGGAAATGACCATAAA+AGG | 0.290293 | 7.4:-75474022 | None:intergenic |
| CTTACTCTTGTGTTGGAGTA+TGG | 0.293550 | 7.4:+75473366 | MS.gene74138:CDS |
| GTAATCACTGCATTCTTAAC+AGG | 0.359063 | 7.4:-75474166 | None:intergenic |
| CAGCATCACCAATCAGCCTT+TGG | 0.360159 | 7.4:-75473472 | None:intergenic |
| GTTCAAGAGGAAGAACAAAA+AGG | 0.380579 | 7.4:+75474492 | MS.gene74138:CDS |
| TTACCAAATACAGTGTTGAT+TGG | 0.383287 | 7.4:-75473518 | None:intergenic |
| AATATCACCTGCATCTTTAG+TGG | 0.406579 | 7.4:-75474224 | None:intergenic |
| TACCAAATACAGTGTTGATT+GGG | 0.407934 | 7.4:-75473517 | None:intergenic |
| AGCATCACCAATCAGCCTTT+GGG | 0.410141 | 7.4:-75473471 | None:intergenic |
| ACTGCGGCGGCTCTTGCATA+TGG | 0.414217 | 7.4:+75474283 | MS.gene74138:CDS |
| ACAAATTCCCAAAGGCTGAT+TGG | 0.415818 | 7.4:+75473464 | MS.gene74138:CDS |
| CTGCCTGTGAAAGAGCAAAA+AGG | 0.419527 | 7.4:+75474554 | MS.gene74138:CDS |
| TTTGATGTCAAGGCCACTGC+TGG | 0.427311 | 7.4:+75474409 | MS.gene74138:CDS |
| AAAGATGCAGGTGATATTGC+TGG | 0.430331 | 7.4:+75474229 | MS.gene74138:CDS |
| CTCTTGTGTTGGAGTATGGC+AGG | 0.433498 | 7.4:+75473370 | MS.gene74138:CDS |
| TTTATCTTTGACCTTGGCGG+TGG | 0.462714 | 7.4:+75474346 | MS.gene74138:CDS |
| TTGTAGTTCACAAGAATTGT+CGG | 0.473999 | 7.4:-75474055 | None:intergenic |
| GACCTAGATGCTATATATCA+AGG | 0.488303 | 7.4:+75474607 | MS.gene74138:CDS |
| GAAATTATTCACAATGATCA+AGG | 0.492859 | 7.4:+75473410 | MS.gene74138:CDS |
| GGCACGACTTACTCTTGTGT+TGG | 0.494525 | 7.4:+75473359 | MS.gene74138:CDS |
| TGTGAATCATTAAAATAAGC+AGG | 0.511579 | 7.4:-75474193 | None:intergenic |
| AAATAAGGTCTTTGATGTCA+AGG | 0.528245 | 7.4:+75474399 | MS.gene74138:CDS |
| TGTCGGTTTGTCATCAGCAC+CGG | 0.535167 | 7.4:-75474038 | None:intergenic |
| CGAAGAGCCACTAAAGATGC+AGG | 0.564548 | 7.4:+75474217 | MS.gene74138:CDS |
| GTTGCGATCGGAATTGACCT+TGG | 0.566821 | 7.4:+75473338 | MS.gene74138:CDS |
| TACCTTGATATATAGCATCT+AGG | 0.567285 | 7.4:-75474609 | None:intergenic |
| TATGCAAGAGCCGCCGCAGT+CGG | 0.567463 | 7.4:-75474280 | None:intergenic |
| ATGCAAAGAGGTTAATTGGA+AGG | 0.571352 | 7.4:+75473957 | MS.gene74138:CDS |
| CAATCTCTCGCATCTGTGAG+AGG | 0.572867 | 7.4:-75474123 | None:intergenic |
| GGCAGTTCTCAACCTCCTCA+AGG | 0.573614 | 7.4:-75474536 | None:intergenic |
| TCTTGTGAACTACAAGGGTG+AGG | 0.592468 | 7.4:+75474063 | MS.gene74138:CDS |
| TTCAGAATGATCTACTGTTG+TGG | 0.596371 | 7.4:+75473999 | MS.gene74138:CDS |
| TATAGCATCTAGGTCAATTG+TGG | 0.597011 | 7.4:-75474599 | None:intergenic |
| TAGGTGAGTGTCTCCAGCAG+TGG | 0.598292 | 7.4:-75474422 | None:intergenic |
| AAATATGAAGGAGTTGCGAT+CGG | 0.598814 | 7.4:+75473326 | MS.gene74138:CDS |
| GACAATTCTTGTGAACTACA+AGG | 0.599895 | 7.4:+75474057 | MS.gene74138:CDS |
| TTTGTGAAAGCAACACAAGA+AGG | 0.603082 | 7.4:-75473446 | None:intergenic |
| TATCAAAGTCTTCACCGCCT+AGG | 0.609377 | 7.4:-75474441 | None:intergenic |
| TGAAGACTTTGATAACAGAA+TGG | 0.610392 | 7.4:+75474450 | MS.gene74138:CDS |
| TTGCTTTCACAAATTCCCAA+AGG | 0.615627 | 7.4:+75473456 | MS.gene74138:CDS |
| CATCAAAAGTTCCACCGCCA+AGG | 0.617660 | 7.4:-75474357 | None:intergenic |
| ACTTTGTGAAGGAGTTCAAG+AGG | 0.618825 | 7.4:+75474479 | MS.gene74138:CDS |
| CAGTAGATCATTCTGAACAA+TGG | 0.620189 | 7.4:-75473993 | None:intergenic |
| CACAAGAGTAAGTCGTGCCA+AGG | 0.620788 | 7.4:-75473355 | None:intergenic |
| ACTGCTGGAGACACTCACCT+AGG | 0.643459 | 7.4:+75474424 | MS.gene74138:CDS |
| AATGGTGAATCACTTTGTGA+AGG | 0.643840 | 7.4:+75474468 | MS.gene74138:CDS |
| GATAATCAATGAACCGACTG+CGG | 0.651446 | 7.4:+75474267 | MS.gene74138:CDS |
| AATCAATGAACCGACTGCGG+CGG | 0.655884 | 7.4:+75474270 | MS.gene74138:CDS |
| GCAGGAGCAGAACGATCGTG+TGG | 0.659349 | 7.4:+75473388 | MS.gene74138:CDS |
| GTGGAAACCCAAAAGCCTTG+AGG | 0.661265 | 7.4:+75474521 | MS.gene74138:CDS |
| GAAACCCAAAAGCCTTGAGG+AGG | 0.662349 | 7.4:+75474524 | MS.gene74138:CDS |
| ACAATTCTTGTGAACTACAA+GGG | 0.663306 | 7.4:+75474058 | MS.gene74138:CDS |
| TTGCTGGTCTCAATGTAATG+CGG | 0.689400 | 7.4:+75474245 | MS.gene74138:CDS |
| GACACTTTCATACGACACTG+AGG | 0.726186 | 7.4:+75474576 | MS.gene74138:CDS |
| ACAGATGCGAGAGATTGCAG+AGG | 0.728184 | 7.4:+75474129 | MS.gene74138:CDS |
| GCTGGAGACACTCACCTAGG+CGG | 0.737514 | 7.4:+75474427 | MS.gene74138:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCTTACAATTAAAAATA+AGG | + | chr7.4:75474384-75474403 | MS.gene74138:CDS | 10.0% |
| !! | GTTGATATGAAAATGAAAAT+AGG | + | chr7.4:75473907-75473926 | MS.gene74138:intron | 20.0% |
| !!! | AATATTTTTATCTTTGACCT+TGG | + | chr7.4:75474340-75474359 | MS.gene74138:CDS | 20.0% |
| !!! | ATTTTTGGAAGTTTTGAAAA+TGG | - | chr7.4:75473813-75473832 | None:intergenic | 20.0% |
| !!! | TATTATAGATCACCATTTTA+GGG | + | chr7.4:75473638-75473657 | MS.gene74138:intron | 20.0% |
| !!! | TCATTTTAAATTGCTAACAT+GGG | + | chr7.4:75473692-75473711 | MS.gene74138:intron | 20.0% |
| !!! | TTACTTTCTAAAAACATTCT+TGG | + | chr7.4:75473666-75473685 | MS.gene74138:intron | 20.0% |
| !!! | TTCATTTTAAATTGCTAACA+TGG | + | chr7.4:75473691-75473710 | MS.gene74138:intron | 20.0% |
| ! | AACTAAAAATTAAACAGTGC+TGG | - | chr7.4:75473562-75473581 | None:intergenic | 25.0% |
| ! | AAGAACAAAAAGGATATTAG+TGG | + | chr7.4:75474502-75474521 | MS.gene74138:CDS | 25.0% |
| ! | GAAATTATTCACAATGATCA+AGG | + | chr7.4:75473410-75473429 | MS.gene74138:CDS | 25.0% |
| ! | TGTGAATCATTAAAATAAGC+AGG | - | chr7.4:75474196-75474215 | None:intergenic | 25.0% |
| ! | TTTGCATCTGCAAAAATTAA+GGG | - | chr7.4:75473944-75473963 | None:intergenic | 25.0% |
| !! | GGTAACATATTTGACATTTT+TGG | - | chr7.4:75473828-75473847 | None:intergenic | 25.0% |
| !! | GTATTATAGATCACCATTTT+AGG | + | chr7.4:75473637-75473656 | MS.gene74138:intron | 25.0% |
| AAAGTAAACAAGCCCTAAAA+TGG | - | chr7.4:75473653-75473672 | None:intergenic | 30.0% | |
| AAATAAGGTCTTTGATGTCA+AGG | + | chr7.4:75474399-75474418 | MS.gene74138:CDS | 30.0% | |
| ACAATTCTTGTGAACTACAA+GGG | + | chr7.4:75474058-75474077 | MS.gene74138:CDS | 30.0% | |
| CTCATAGTTAATAATTCTGC+TGG | + | chr7.4:75473724-75473743 | MS.gene74138:intron | 30.0% | |
| CTTTGCATCTGCAAAAATTA+AGG | - | chr7.4:75473945-75473964 | None:intergenic | 30.0% | |
| TACCTTGATATATAGCATCT+AGG | - | chr7.4:75474612-75474631 | None:intergenic | 30.0% | |
| TTGTAGTTCACAAGAATTGT+CGG | - | chr7.4:75474058-75474077 | None:intergenic | 30.0% | |
| ! | ATTTTTATCTTTGACCTTGG+CGG | + | chr7.4:75474343-75474362 | MS.gene74138:CDS | 30.0% |
| ! | CACAATTATCTCTCTTTTGA+AGG | - | chr7.4:75474309-75474328 | None:intergenic | 30.0% |
| ! | GTCATTCTCTTCTACAATTT+TGG | - | chr7.4:75473849-75473868 | None:intergenic | 30.0% |
| ! | TAATTTTTGCAGATGCAAAG+AGG | + | chr7.4:75473945-75473964 | MS.gene74138:intron | 30.0% |
| ! | TGAAGACTTTGATAACAGAA+TGG | + | chr7.4:75474450-75474469 | MS.gene74138:CDS | 30.0% |
| !! | TACCAAATACAGTGTTGATT+GGG | - | chr7.4:75473520-75473539 | None:intergenic | 30.0% |
| !! | TTACCAAATACAGTGTTGAT+TGG | - | chr7.4:75473521-75473540 | None:intergenic | 30.0% |
| AAATATGAAGGAGTTGCGAT+CGG | + | chr7.4:75473326-75473345 | MS.gene74138:CDS | 35.0% | |
| AACCCAATCAACACTGTATT+TGG | + | chr7.4:75473515-75473534 | MS.gene74138:CDS | 35.0% | |
| AATATCACCTGCATCTTTAG+TGG | - | chr7.4:75474227-75474246 | None:intergenic | 35.0% | |
| AATGGTGAATCACTTTGTGA+AGG | + | chr7.4:75474468-75474487 | MS.gene74138:CDS | 35.0% | |
| ATGCAAAGAGGTTAATTGGA+AGG | + | chr7.4:75473957-75473976 | MS.gene74138:CDS | 35.0% | |
| CAGTAGATCATTCTGAACAA+TGG | - | chr7.4:75473996-75474015 | None:intergenic | 35.0% | |
| GACAATTCTTGTGAACTACA+AGG | + | chr7.4:75474057-75474076 | MS.gene74138:CDS | 35.0% | |
| GACCTAGATGCTATATATCA+AGG | + | chr7.4:75474607-75474626 | MS.gene74138:CDS | 35.0% | |
| GTAATCACTGCATTCTTAAC+AGG | - | chr7.4:75474169-75474188 | None:intergenic | 35.0% | |
| GTTCAAGAGGAAGAACAAAA+AGG | + | chr7.4:75474492-75474511 | MS.gene74138:CDS | 35.0% | |
| TATAGCATCTAGGTCAATTG+TGG | - | chr7.4:75474602-75474621 | None:intergenic | 35.0% | |
| TCTGCTGGATAAAAGATAGA+CGG | + | chr7.4:75473739-75473758 | MS.gene74138:intron | 35.0% | |
| TTCAGAATGATCTACTGTTG+TGG | + | chr7.4:75473999-75474018 | MS.gene74138:CDS | 35.0% | |
| TTGCTTTCACAAATTCCCAA+AGG | + | chr7.4:75473456-75473475 | MS.gene74138:CDS | 35.0% | |
| TTTGTGAAAGCAACACAAGA+AGG | - | chr7.4:75473449-75473468 | None:intergenic | 35.0% | |
| ! | GTTAGAAGAAGCCTGATTTT+TGG | - | chr7.4:75473498-75473517 | None:intergenic | 35.0% |
| AAAGATGCAGGTGATATTGC+TGG | + | chr7.4:75474229-75474248 | MS.gene74138:CDS | 40.0% | |
| ACAAATTCCCAAAGGCTGAT+TGG | + | chr7.4:75473464-75473483 | MS.gene74138:CDS | 40.0% | |
| ACTTTGTGAAGGAGTTCAAG+AGG | + | chr7.4:75474479-75474498 | MS.gene74138:CDS | 40.0% | |
| CTTACTCTTGTGTTGGAGTA+TGG | + | chr7.4:75473366-75473385 | MS.gene74138:CDS | 40.0% | |
| GATAATCAATGAACCGACTG+CGG | + | chr7.4:75474267-75474286 | MS.gene74138:CDS | 40.0% | |
| GCAGATGCAAAGAGGTTAAT+TGG | + | chr7.4:75473953-75473972 | MS.gene74138:intron | 40.0% | |
| ! | TCTACTGTTGTGGCCTTTTA+TGG | + | chr7.4:75474009-75474028 | MS.gene74138:CDS | 40.0% |
| ! | TGGCCTTTTATGGTCATTTC+CGG | + | chr7.4:75474019-75474038 | MS.gene74138:CDS | 40.0% |
| ! | TGTCCTTTTTGCTCTTTCAC+AGG | - | chr7.4:75474560-75474579 | None:intergenic | 40.0% |
| ! | TTGCTGGTCTCAATGTAATG+CGG | + | chr7.4:75474245-75474264 | MS.gene74138:CDS | 40.0% |
| !!! | AGAGATTGCAGAGGCATTTT+TGG | + | chr7.4:75474138-75474157 | MS.gene74138:CDS | 40.0% |
| AGCATCACCAATCAGCCTTT+GGG | - | chr7.4:75473474-75473493 | None:intergenic | 45.0% | |
| CTGCCTGTGAAAGAGCAAAA+AGG | + | chr7.4:75474554-75474573 | MS.gene74138:CDS | 45.0% | |
| GACACTTTCATACGACACTG+AGG | + | chr7.4:75474576-75474595 | MS.gene74138:CDS | 45.0% | |
| GCACCGGAAATGACCATAAA+AGG | - | chr7.4:75474025-75474044 | None:intergenic | 45.0% | |
| TATCAAAGTCTTCACCGCCT+AGG | - | chr7.4:75474444-75474463 | None:intergenic | 45.0% | |
| TCTTGTGAACTACAAGGGTG+AGG | + | chr7.4:75474063-75474082 | MS.gene74138:CDS | 45.0% | |
| TTTATCTTTGACCTTGGCGG+TGG | + | chr7.4:75474346-75474365 | MS.gene74138:CDS | 45.0% | |
| ! | TCAACCTCCTCAAGGCTTTT+GGG | - | chr7.4:75474531-75474550 | None:intergenic | 45.0% |
| ! | TGGTGATGCTGCCAAAAATC+AGG | + | chr7.4:75473484-75473503 | MS.gene74138:CDS | 45.0% |
| AATCAATGAACCGACTGCGG+CGG | + | chr7.4:75474270-75474289 | MS.gene74138:CDS | 50.0% | |
| ACAGATGCGAGAGATTGCAG+AGG | + | chr7.4:75474129-75474148 | MS.gene74138:CDS | 50.0% | |
| CAATCTCTCGCATCTGTGAG+AGG | - | chr7.4:75474126-75474145 | None:intergenic | 50.0% | |
| CACAAGAGTAAGTCGTGCCA+AGG | - | chr7.4:75473358-75473377 | None:intergenic | 50.0% | |
| CAGCATCACCAATCAGCCTT+TGG | - | chr7.4:75473475-75473494 | None:intergenic | 50.0% | |
| CATCAAAAGTTCCACCGCCA+AGG | - | chr7.4:75474360-75474379 | None:intergenic | 50.0% | |
| CGAAGAGCCACTAAAGATGC+AGG | + | chr7.4:75474217-75474236 | MS.gene74138:CDS | 50.0% | |
| CTCTTGTGTTGGAGTATGGC+AGG | + | chr7.4:75473370-75473389 | MS.gene74138:CDS | 50.0% | |
| GAAACCCAAAAGCCTTGAGG+AGG | + | chr7.4:75474524-75474543 | MS.gene74138:CDS | 50.0% | |
| GGCACGACTTACTCTTGTGT+TGG | + | chr7.4:75473359-75473378 | MS.gene74138:CDS | 50.0% | |
| GTGGAAACCCAAAAGCCTTG+AGG | + | chr7.4:75474521-75474540 | MS.gene74138:CDS | 50.0% | |
| GTTGCGATCGGAATTGACCT+TGG | + | chr7.4:75473338-75473357 | MS.gene74138:CDS | 50.0% | |
| TTTGATGTCAAGGCCACTGC+TGG | + | chr7.4:75474409-75474428 | MS.gene74138:CDS | 50.0% | |
| ! | CTCAACCTCCTCAAGGCTTT+TGG | - | chr7.4:75474532-75474551 | None:intergenic | 50.0% |
| !! | TGTCGGTTTGTCATCAGCAC+CGG | - | chr7.4:75474041-75474060 | None:intergenic | 50.0% |
| ACTGCTGGAGACACTCACCT+AGG | + | chr7.4:75474424-75474443 | MS.gene74138:CDS | 55.0% | |
| GGCAGTTCTCAACCTCCTCA+AGG | - | chr7.4:75474539-75474558 | None:intergenic | 55.0% | |
| TAGGTGAGTGTCTCCAGCAG+TGG | - | chr7.4:75474425-75474444 | None:intergenic | 55.0% | |
| ACTGCGGCGGCTCTTGCATA+TGG | + | chr7.4:75474283-75474302 | MS.gene74138:CDS | 60.0% | |
| GCAGGAGCAGAACGATCGTG+TGG | + | chr7.4:75473388-75473407 | MS.gene74138:CDS | 60.0% | |
| GCTGGAGACACTCACCTAGG+CGG | + | chr7.4:75474427-75474446 | MS.gene74138:CDS | 60.0% | |
| TATGCAAGAGCCGCCGCAGT+CGG | - | chr7.4:75474283-75474302 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 75473317 | 75474648 | 75473317 | ID=MS.gene74138 |
| chr7.4 | mRNA | 75473317 | 75474648 | 75473317 | ID=MS.gene74138.t1;Parent=MS.gene74138 |
| chr7.4 | exon | 75473317 | 75473536 | 75473317 | ID=MS.gene74138.t1.exon1;Parent=MS.gene74138.t1 |
| chr7.4 | CDS | 75473317 | 75473536 | 75473317 | ID=cds.MS.gene74138.t1;Parent=MS.gene74138.t1 |
| chr7.4 | exon | 75473957 | 75474648 | 75473957 | ID=MS.gene74138.t1.exon2;Parent=MS.gene74138.t1 |
| chr7.4 | CDS | 75473957 | 75474648 | 75473957 | ID=cds.MS.gene74138.t1;Parent=MS.gene74138.t1 |
| Gene Sequence |
| Protein sequence |
