AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74446


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74446.t1 MTR_6g023665 95.425 306 14 0 1 306 8 313 0.0 602
MS.gene74446.t1 MTR_6g023665 96.078 51 2 0 305 355 421 471 1.16e-22 99.0
MS.gene74446.t1 MTR_6g488280 91.176 306 27 0 1 306 1 306 0.0 576
MS.gene74446.t1 MTR_6g488280 90.196 51 5 0 305 355 414 464 4.88e-21 94.4
MS.gene74446.t1 MTR_0428s0010 91.176 306 27 0 1 306 1 306 0.0 576
MS.gene74446.t1 MTR_0428s0010 90.196 51 5 0 305 355 414 464 4.88e-21 94.4
MS.gene74446.t1 MTR_8g006730 68.405 326 97 4 1 322 1 324 1.59e-156 447
MS.gene74446.t1 MTR_8g006730 80.000 50 10 0 305 354 416 465 2.25e-16 80.5
MS.gene74446.t1 MTR_8g006710 67.077 325 102 3 1 322 1 323 2.20e-155 445
MS.gene74446.t1 MTR_8g006710 75.000 48 12 0 305 352 415 462 3.55e-14 73.9
MS.gene74446.t1 MTR_8g465670 55.375 307 132 3 2 306 3 306 1.37e-120 357
MS.gene74446.t1 MTR_8g006220 55.519 308 132 3 1 306 1 305 4.83e-120 355
MS.gene74446.t1 MTR_0184s0040 45.714 315 163 6 1 310 16 327 3.74e-86 268
MS.gene74446.t1 MTR_0078s0190 45.714 315 163 6 1 310 16 327 3.74e-86 268
MS.gene74446.t1 MTR_8g009073 44.586 314 167 6 1 310 1 311 1.18e-82 259
MS.gene74446.t1 MTR_0078s0010 43.810 315 169 6 1 310 1 312 8.54e-82 257
MS.gene74446.t1 MTR_8g009067 45.541 314 164 5 1 310 1 311 1.25e-81 256
MS.gene74446.t1 MTR_0078s0200 43.131 313 167 6 1 306 1 309 4.88e-81 250
MS.gene74446.t1 MTR_7g047030 43.730 311 167 6 1 306 1 308 1.16e-80 254
MS.gene74446.t1 MTR_7g047270 43.730 311 167 6 1 306 1 308 1.16e-80 254
MS.gene74446.t1 MTR_8g009050 44.805 308 163 6 1 304 1 305 1.53e-80 253
MS.gene74446.t1 MTR_8g009055 44.805 308 163 5 1 304 1 305 2.28e-80 253
MS.gene74446.t1 MTR_0078s0060 44.586 314 167 6 1 310 1 311 2.97e-80 253
MS.gene74446.t1 MTR_8g008990 44.481 308 164 5 1 304 1 305 7.19e-80 252
MS.gene74446.t1 MTR_1g019510 41.875 320 181 4 1 318 1 317 3.88e-79 250
MS.gene74446.t1 MTR_0184s0030 43.131 313 167 6 1 306 1 309 4.00e-79 250
MS.gene74446.t1 MTR_8g009063 45.098 306 161 5 1 302 8 310 6.38e-79 250
MS.gene74446.t1 MTR_7g046490 43.732 343 185 5 1 342 1 336 8.87e-79 249
MS.gene74446.t1 MTR_8g008970 45.223 314 165 5 1 310 1 311 4.98e-78 255
MS.gene74446.t1 MTR_8g008970 39.645 169 91 6 127 289 466 629 2.21e-19 90.1
MS.gene74446.t1 MTR_7g117170 44.013 309 165 6 7 310 16 321 3.50e-75 240
MS.gene74446.t1 MTR_8g027885 42.525 301 166 7 7 306 19 313 1.48e-74 238
MS.gene74446.t1 MTR_8g077590 42.434 304 164 6 7 304 10 308 2.81e-72 232
MS.gene74446.t1 MTR_8g027870 40.864 301 171 7 7 306 19 313 1.69e-70 228
MS.gene74446.t1 MTR_8g006270 41.956 317 170 8 1 311 1 309 6.05e-70 226
MS.gene74446.t1 MTR_6g005600 39.032 310 182 5 1 306 1 307 4.55e-66 216
MS.gene74446.t1 MTR_8g006260 40.741 324 170 11 1 310 1 316 1.57e-64 212
MS.gene74446.t1 MTR_8g012635 39.286 336 187 8 1 325 1 330 4.32e-62 206
MS.gene74446.t1 MTR_8g012745 40.705 312 173 6 1 304 1 308 3.52e-61 203
MS.gene74446.t1 MTR_8g012650 39.514 329 184 7 1 318 1 325 7.77e-61 202
MS.gene74446.t1 MTR_3g009510 30.838 334 215 7 3 323 2 332 2.47e-51 177
MS.gene74446.t1 MTR_8g006230 44.554 202 106 5 108 306 51 249 1.15e-49 168
MS.gene74446.t1 MTR_8g012630 35.505 307 140 4 1 304 1 252 5.81e-49 170
MS.gene74446.t1 MTR_8g009067 46.667 195 97 5 120 310 2 193 6.39e-48 166
MS.gene74446.t1 MTR_8g074550 34.783 322 188 11 3 311 5 317 8.78e-46 164
MS.gene74446.t1 MTR_5g019580 33.013 312 189 9 9 306 10 315 1.33e-45 162
MS.gene74446.t1 MTR_6g033625 32.808 317 190 7 4 303 2 312 3.63e-43 155
MS.gene74446.t1 MTR_8g009073 44.865 185 95 6 130 310 1 182 1.74e-42 151
MS.gene74446.t1 MTR_6g033615 30.547 311 191 6 4 303 2 298 1.97e-40 148
MS.gene74446.t1 MTR_5g090630 33.333 312 185 11 3 304 2 300 2.70e-40 148
MS.gene74446.t1 MTR_5g090670 31.464 321 190 11 3 304 2 311 7.25e-40 147
MS.gene74446.t1 MTR_6g005660 35.200 250 155 5 1 246 1 247 1.42e-39 141
MS.gene74446.t1 MTR_5g090700 30.818 318 196 10 3 304 2 311 2.70e-39 145
MS.gene74446.t1 MTR_6g033660 29.618 314 197 8 7 303 5 311 1.84e-38 143
MS.gene74446.t1 MTR_5g070040 31.437 334 203 13 1 317 6 330 8.26e-38 141
MS.gene74446.t1 MTR_6g033725 29.874 318 201 7 4 306 2 312 1.99e-37 140
MS.gene74446.t1 MTR_5g070090 30.247 324 199 9 1 307 6 319 8.99e-37 138
MS.gene74446.t1 MTR_5g090600 31.310 313 195 9 3 304 2 305 1.02e-36 138
MS.gene74446.t1 MTR_5g098930 31.090 312 194 11 3 304 2 302 1.53e-36 138
MS.gene74446.t1 MTR_6g033675 29.193 322 195 10 4 303 2 312 2.30e-36 137
MS.gene74446.t1 MTR_5g019580 30.868 311 169 9 9 306 62 339 1.67e-35 135
MS.gene74446.t1 MTR_5g090620 31.348 319 193 10 3 305 2 310 3.38e-35 134
MS.gene74446.t1 MTR_5g090660 29.524 315 200 9 3 304 2 307 6.42e-35 134
MS.gene74446.t1 MTR_5g090580 30.408 319 194 10 3 304 2 309 2.69e-33 129
MS.gene74446.t1 MTR_2g040530 29.193 322 208 8 4 313 3 316 4.24e-32 125
MS.gene74446.t1 MTR_2g046750 28.981 314 196 8 7 304 6 308 4.89e-32 125
MS.gene74446.t1 MTR_5g090610 29.167 312 193 9 3 304 2 295 9.34e-32 124
MS.gene74446.t1 MTR_2g046820 29.338 317 206 7 7 313 6 314 2.34e-30 120
MS.gene74446.t1 MTR_4g082810 29.874 318 187 10 7 302 8 311 6.59e-27 110
MS.gene74446.t1 MTR_8g012730 37.640 178 89 4 144 318 4 162 1.20e-25 105
MS.gene74446.t1 MTR_3g009500 29.412 255 163 6 4 244 3 254 2.61e-25 103
MS.gene74446.t1 MTR_3g009520 28.295 258 168 6 1 244 1 255 7.01e-25 102
MS.gene74446.t1 MTR_5g464760 28.488 344 186 15 2 302 8 334 7.40e-25 105
MS.gene74446.t1 MTR_6g078320 27.794 349 217 11 7 329 12 351 1.10e-23 102
MS.gene74446.t1 MTR_5g090650 26.433 314 180 13 3 304 2 276 1.64e-23 99.8
MS.gene74446.t1 MTR_5g464810 28.698 338 181 17 7 302 13 332 1.08e-22 99.4
MS.gene74446.t1 MTR_5g064240 28.698 338 181 17 7 302 13 332 1.08e-22 99.4
MS.gene74446.t1 MTR_7g013180 26.220 328 181 8 10 305 9 307 1.56e-22 98.6
MS.gene74446.t1 MTR_0036s0220 28.080 349 169 18 7 302 13 332 3.93e-21 94.7
MS.gene74446.t1 MTR_8g068330 26.190 378 227 12 2 353 4 355 3.99e-21 94.4
MS.gene74446.t1 MTR_3g069690 28.528 326 181 12 2 302 3 301 4.58e-21 94.4
MS.gene74446.t1 MTR_4g082820 28.125 320 187 10 7 302 8 308 3.96e-20 91.7
MS.gene74446.t1 MTR_6g014290 26.409 337 200 12 3 302 7 332 6.30e-20 91.3
MS.gene74446.t1 MTR_1g019520 72.222 54 15 0 255 308 3 56 1.22e-19 86.7
MS.gene74446.t1 MTR_2g008210 27.647 340 187 16 3 302 8 328 1.38e-19 90.1
MS.gene74446.t1 MTR_8g068340 25.067 375 235 14 2 353 8 359 1.58e-19 89.7
MS.gene74446.t1 MTR_2g098430 26.048 334 198 14 1 304 1 315 2.34e-19 89.4
MS.gene74446.t1 MTR_6g038300 27.300 337 193 15 7 316 12 323 2.78e-19 89.0
MS.gene74446.t1 MTR_7g013240 25.890 309 191 9 10 302 10 296 5.00e-19 88.2
MS.gene74446.t1 MTR_8g068360 25.974 385 218 15 2 353 8 358 9.35e-19 87.4
MS.gene74446.t1 MTR_7g013200 25.962 312 190 11 9 302 8 296 1.76e-18 86.7
MS.gene74446.t1 MTR_3g069710 27.010 311 193 10 7 302 13 304 3.12e-18 85.9
MS.gene74446.t1 MTR_7g013260 26.045 311 191 9 9 302 9 297 3.80e-18 85.5
MS.gene74446.t1 MTR_3g479490 25.872 344 196 14 1 302 1 327 3.98e-18 85.9
MS.gene74446.t1 MTR_4g064987 26.384 307 203 11 7 302 9 303 4.26e-18 85.5
MS.gene74446.t1 MTR_3g479470 26.113 337 200 13 3 302 10 334 4.92e-18 85.5
MS.gene74446.t1 MTR_3g008010 25.978 358 209 15 9 326 13 354 5.45e-18 85.5
MS.gene74446.t1 MTR_6g014220 25.519 337 203 12 3 302 7 332 1.31e-17 84.3
MS.gene74446.t1 MTR_5g090690 27.801 241 131 8 75 304 31 239 1.38e-17 83.6
MS.gene74446.t1 MTR_5g058320 26.814 317 201 11 8 302 12 319 2.30e-17 83.6
MS.gene74446.t1 MTR_6g038200 27.273 341 184 18 2 307 4 315 2.50e-17 83.2
MS.gene74446.t1 MTR_5g087620 26.331 338 204 13 2 304 6 333 2.88e-17 83.2
MS.gene74446.t1 MTR_4g064987 26.299 308 196 12 7 302 9 297 3.91e-17 82.8
MS.gene74446.t1 MTR_6g038230 28.190 337 186 17 2 307 4 315 4.86e-17 82.4
MS.gene74446.t1 MTR_6g014040 28.696 345 185 17 3 302 7 335 6.24e-17 82.0
MS.gene74446.t1 MTR_7g013220 25.633 316 197 12 9 302 8 307 6.65e-17 82.0
MS.gene74446.t1 MTR_6g038240 25.000 320 191 11 9 302 14 310 1.36e-16 80.9
MS.gene74446.t1 MTR_4g094220 25.513 341 193 13 7 302 8 332 1.46e-16 80.9
MS.gene74446.t1 MTR_7g080935 26.036 338 192 15 1 306 1 312 1.54e-16 80.9
MS.gene74446.t1 MTR_4g095008 26.199 271 177 9 80 338 82 341 3.08e-16 80.1
MS.gene74446.t1 MTR_7g067120 25.078 319 183 11 3 302 6 287 4.44e-16 79.3
MS.gene74446.t1 MTR_8g059425 27.515 338 197 15 2 302 6 332 4.58e-16 79.7
MS.gene74446.t1 MTR_3g479520 24.927 341 203 12 1 302 10 336 5.16e-16 79.3
MS.gene74446.t1 MTR_5g035580 24.189 339 198 11 7 313 14 325 5.40e-16 79.3
MS.gene74446.t1 MTR_5g040030 26.404 356 222 13 3 333 11 351 5.72e-16 79.3
MS.gene74446.t1 MTR_4g008630 23.944 355 228 10 2 340 10 338 5.83e-16 79.3
MS.gene74446.t1 MTR_4g485640 26.087 299 197 8 14 301 217 502 7.43e-16 79.3
MS.gene74446.t1 MTR_7g055710 25.697 323 200 11 7 302 12 321 8.71e-16 78.6
MS.gene74446.t1 MTR_5g072860 25.697 323 211 8 7 311 19 330 8.82e-16 78.6
MS.gene74446.t1 MTR_6g013960 26.225 347 194 16 2 303 6 335 9.89e-16 78.6
MS.gene74446.t1 MTR_2g008220 26.036 338 215 10 7 326 15 335 1.18e-15 78.2
MS.gene74446.t1 MTR_5g075440 25.237 317 210 10 10 311 14 318 1.23e-15 78.2
MS.gene74446.t1 MTR_2g008226 26.875 320 202 11 7 302 11 322 1.49e-15 77.8
MS.gene74446.t1 MTR_5g035560 23.964 338 172 13 7 302 12 306 1.59e-15 77.8
MS.gene74446.t1 MTR_5g031860 25.994 327 198 14 7 302 13 326 1.99e-15 77.4
MS.gene74446.t1 MTR_3g079480 24.260 338 205 13 3 302 18 342 3.77e-15 76.6
MS.gene74446.t1 MTR_6g052375 34.058 138 79 5 169 296 27 162 3.92e-15 75.9
MS.gene74446.t1 MTR_0288s0020 26.126 333 189 15 3 302 7 315 4.56e-15 76.6
MS.gene74446.t1 MTR_6g014187 26.100 341 200 17 2 302 6 334 5.30e-15 76.3
MS.gene74446.t1 MTR_6g014020 26.822 343 195 14 2 302 6 334 9.63e-15 75.5
MS.gene74446.t1 MTR_7g070940 38.129 139 76 4 173 302 173 310 9.78e-15 75.5
MS.gene74446.t1 MTR_7g067330 25.868 317 183 11 3 302 6 287 1.04e-14 75.1
MS.gene74446.t1 MTR_7g080940 24.332 337 199 13 1 306 1 312 1.34e-14 75.1
MS.gene74446.t1 MTR_6g014250 23.739 337 209 12 3 302 7 332 1.66e-14 74.7
MS.gene74446.t1 MTR_5g031840 25.496 353 197 16 7 317 6 334 2.14e-14 74.3
MS.gene74446.t1 MTR_6g014050 33.918 171 89 10 149 302 172 335 2.54e-14 74.3
MS.gene74446.t1 MTR_6g014186 25.872 344 197 16 2 302 3 331 2.86e-14 73.9
MS.gene74446.t1 MTR_7g011470 33.562 146 82 6 170 302 177 320 4.32e-14 73.6
MS.gene74446.t1 MTR_6g013440 27.273 352 180 19 3 302 8 335 4.93e-14 73.6
MS.gene74446.t1 MTR_4g485630 24.590 305 202 8 16 302 19 313 5.09e-14 73.2
MS.gene74446.t1 MTR_6g014200 36.842 152 69 9 170 302 188 331 5.10e-14 73.2
MS.gene74446.t1 MTR_6g011340 25.566 309 178 11 35 302 37 334 5.49e-14 73.2
MS.gene74446.t1 MTR_7g102560 27.753 227 126 9 124 328 133 343 5.59e-14 73.2
MS.gene74446.t1 MTR_4g031800 35.849 106 56 1 210 303 206 311 5.80e-14 73.2
MS.gene74446.t1 MTR_6g013450 27.596 337 189 17 8 302 12 335 5.97e-14 73.2
MS.gene74446.t1 MTR_7g011470 33.813 139 78 5 177 302 179 316 7.07e-14 72.8
MS.gene74446.t1 MTR_8g083290 25.378 331 190 12 7 302 5 313 7.72e-14 72.8
MS.gene74446.t1 MTR_7g102460 25.948 343 215 13 9 324 12 342 9.54e-14 72.4
MS.gene74446.t1 MTR_7g070870 31.148 183 104 7 161 333 173 343 1.13e-13 72.4
MS.gene74446.t1 MTR_6g038220 25.836 329 176 18 9 302 14 309 1.19e-13 72.0
MS.gene74446.t1 MTR_2g008225 25.000 344 211 11 7 326 16 336 1.75e-13 71.6
MS.gene74446.t1 MTR_5g031830 24.620 329 201 16 7 302 13 327 2.41e-13 71.2
MS.gene74446.t1 MTR_3g031450 23.567 314 197 10 7 302 19 307 2.53e-13 71.2
MS.gene74446.t1 MTR_8g083280 23.901 364 252 8 7 351 8 365 2.70e-13 71.2
MS.gene74446.t1 MTR_6g014170 27.011 348 168 15 3 302 7 316 3.43e-13 70.9
MS.gene74446.t1 MTR_5g072810 23.750 320 197 11 7 303 13 308 5.23e-13 70.1
MS.gene74446.t1 MTR_6g042310 25.948 343 204 15 7 326 19 334 5.59e-13 70.1
MS.gene74446.t1 MTR_7g070610 24.928 349 208 15 11 326 20 347 5.98e-13 70.1
MS.gene74446.t1 MTR_8g071070 27.628 333 190 14 4 304 5 318 6.28e-13 70.1
MS.gene74446.t1 MTR_0536s0020 25.155 322 194 14 2 301 14 310 6.42e-13 70.1
MS.gene74446.t1 MTR_7g102490 24.011 354 220 16 4 324 7 344 7.98e-13 69.7
MS.gene74446.t1 MTR_5g016480 29.677 155 93 6 161 302 168 319 8.97e-13 69.7
MS.gene74446.t1 MTR_5g039900 22.636 349 226 10 7 323 14 350 9.36e-13 69.7
MS.gene74446.t1 MTR_7g102550 24.722 360 213 14 9 332 12 349 1.04e-12 69.3
MS.gene74446.t1 MTR_7g070660 24.606 317 206 10 7 302 12 316 1.31e-12 68.9
MS.gene74446.t1 MTR_1g029540 23.625 309 192 13 11 302 19 300 1.31e-12 68.9
MS.gene74446.t1 MTR_7g070800 23.513 353 235 11 1 333 1 338 1.33e-12 68.9
MS.gene74446.t1 MTR_4g123553 25.731 342 206 13 7 326 16 331 1.40e-12 68.9
MS.gene74446.t1 MTR_6g013990 27.485 342 192 15 2 302 6 332 1.73e-12 68.6
MS.gene74446.t1 MTR_2g034990 26.154 325 199 13 1 301 6 313 1.98e-12 68.6
MS.gene74446.t1 MTR_4g485620 25.600 250 165 7 96 332 84 325 2.01e-12 68.6
MS.gene74446.t1 MTR_6g014150 31.414 191 106 10 129 302 149 331 2.06e-12 68.6
MS.gene74446.t1 MTR_6g035265 24.629 337 197 16 12 326 19 320 2.47e-12 68.2
MS.gene74446.t1 MTR_8g064870 30.986 142 84 5 174 303 178 317 2.73e-12 68.2
MS.gene74446.t1 MTR_1g032490 24.159 327 210 13 7 308 11 324 3.57e-12 67.8
MS.gene74446.t1 MTR_8g090095 29.545 132 85 2 209 332 220 351 4.15e-12 67.4
MS.gene74446.t1 MTR_4g094920 29.932 147 85 5 203 338 217 356 4.46e-12 67.4
MS.gene74446.t1 MTR_6g013435 29.452 146 89 4 170 302 61 205 5.19e-12 66.2
MS.gene74446.t1 MTR_4g485590 30.952 168 92 8 169 317 151 313 5.28e-12 67.0
MS.gene74446.t1 MTR_6g036650 25.063 395 221 14 2 351 14 378 6.06e-12 67.0
MS.gene74446.t1 MTR_1g040310 24.796 367 215 13 1 333 8 347 6.23e-12 67.0
MS.gene74446.t1 MTR_6g013680 24.820 278 167 10 64 302 7 281 7.17e-12 66.2
MS.gene74446.t1 MTR_8g064880 27.014 211 134 6 105 302 115 318 9.51e-12 66.2
MS.gene74446.t1 MTR_8g066610 25.419 358 212 14 7 330 10 346 1.37e-11 65.9
MS.gene74446.t1 MTR_6g013920 30.872 149 82 7 170 302 190 333 1.46e-11 65.9
MS.gene74446.t1 MTR_7g102450 24.855 346 216 12 8 332 13 335 1.48e-11 65.9
MS.gene74446.t1 MTR_4g117950 24.845 322 196 11 1 301 1 297 2.02e-11 65.5
MS.gene74446.t1 MTR_3g479610 32.075 106 57 2 211 302 62 166 2.18e-11 64.7
MS.gene74446.t1 MTR_6g013900 32.192 146 84 5 170 302 190 333 2.62e-11 65.1
MS.gene74446.t1 MTR_8g043470 25.000 268 157 9 58 311 4 241 2.63e-11 64.7
MS.gene74446.t1 MTR_1g107350 28.692 237 143 10 83 304 92 317 2.77e-11 65.1
MS.gene74446.t1 MTR_1g062380 23.164 354 230 15 7 332 17 356 3.31e-11 64.7
MS.gene74446.t1 MTR_7g080950 23.494 332 203 13 1 306 1 307 5.25e-11 63.9
MS.gene74446.t1 MTR_7g070810 29.885 174 100 7 170 333 175 336 5.71e-11 63.9
MS.gene74446.t1 MTR_4g117890 25.617 324 190 17 2 301 9 305 6.22e-11 63.9
MS.gene74446.t1 MTR_6g014190 31.655 139 81 5 177 302 4 141 6.54e-11 62.8
MS.gene74446.t1 MTR_4g117960 25.223 337 208 15 10 326 15 327 6.93e-11 63.9
MS.gene74446.t1 MTR_1g107380 25.481 208 138 6 108 303 122 324 7.08e-11 63.5
MS.gene74446.t1 MTR_3g084520 25.229 218 138 6 109 305 106 319 7.85e-11 63.5
MS.gene74446.t1 MTR_0891s0010 29.787 141 83 4 177 302 4 143 8.45e-11 62.4
MS.gene74446.t1 MTR_1g107315 24.012 329 213 11 2 306 4 319 9.09e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74446.t1 AT4G01070 41.853 313 173 7 3 310 5 313 2.26e-73 231
MS.gene74446.t1 AT1G01420 41.479 311 169 9 7 310 9 313 2.29e-72 233
MS.gene74446.t1 AT4G01070 42.071 309 170 7 7 310 9 313 2.30e-72 233
MS.gene74446.t1 AT1G01420 41.479 311 169 9 7 310 12 316 2.49e-72 233
MS.gene74446.t1 AT1G01390 40.000 310 175 8 7 310 9 313 6.59e-67 219
MS.gene74446.t1 AT1G01390 40.000 310 175 8 7 310 26 330 9.30e-67 219
MS.gene74446.t1 AT5G26310 32.459 305 187 11 8 304 9 302 2.11e-44 159
MS.gene74446.t1 AT5G66690 32.792 308 182 12 8 304 9 302 1.07e-41 152
MS.gene74446.t1 AT3G50740 32.372 312 191 11 4 304 5 307 1.84e-41 151
MS.gene74446.t1 AT3G16520 31.410 312 202 8 7 309 6 314 1.74e-37 140
MS.gene74446.t1 AT3G16520 31.410 312 202 8 7 309 6 314 2.06e-37 140
MS.gene74446.t1 AT3G16520 31.410 312 202 8 7 309 6 314 2.09e-37 140
MS.gene74446.t1 AT3G21780 31.210 314 189 7 4 302 2 303 7.32e-37 139
MS.gene74446.t1 AT2G18570 30.696 316 196 12 9 311 8 313 1.47e-36 138
MS.gene74446.t1 AT3G21790 29.560 318 192 8 7 302 5 312 2.40e-36 137
MS.gene74446.t1 AT1G07250 27.222 360 227 10 1 335 1 350 8.98e-36 136
MS.gene74446.t1 AT3G21800 29.321 324 206 8 4 311 3 319 3.51e-34 131
MS.gene74446.t1 AT1G07260 29.794 339 207 12 2 317 4 334 9.04e-34 130
MS.gene74446.t1 AT4G36770 31.833 311 188 11 8 306 6 304 5.16e-33 128
MS.gene74446.t1 AT2G29750 30.564 337 200 14 7 317 9 337 1.04e-32 127
MS.gene74446.t1 AT2G29730 28.125 320 200 9 10 309 9 318 4.36e-32 125
MS.gene74446.t1 AT3G21750 28.571 308 203 8 4 302 2 301 7.39e-32 125
MS.gene74446.t1 AT2G29710 27.885 312 197 8 10 302 9 311 1.33e-31 124
MS.gene74446.t1 AT1G07240 27.812 320 208 8 3 302 2 318 6.42e-31 122
MS.gene74446.t1 AT3G21760 27.554 323 195 8 7 302 5 315 6.17e-30 120
MS.gene74446.t1 AT4G15280 27.532 316 203 8 4 302 2 308 7.77e-29 116
MS.gene74446.t1 AT4G15280 27.532 316 203 8 4 302 34 340 9.18e-29 117
MS.gene74446.t1 AT2G29740 28.529 340 195 12 2 308 4 328 2.58e-27 112
MS.gene74446.t1 AT4G15260 30.366 191 126 3 116 302 1 188 5.65e-26 107
MS.gene74446.t1 AT2G18560 32.093 215 134 6 96 304 8 216 5.86e-26 107
MS.gene74446.t1 AT1G05675 29.268 328 185 14 1 302 1 307 2.38e-23 100
MS.gene74446.t1 AT1G05680 26.708 322 201 12 1 302 1 307 1.19e-19 90.1
MS.gene74446.t1 AT1G22360 28.402 338 191 14 3 302 7 331 1.50e-19 90.1
MS.gene74446.t1 AT1G22360 28.402 338 191 14 3 302 7 331 1.53e-19 90.1
MS.gene74446.t1 AT3G46650 24.437 311 198 9 1 303 5 286 3.03e-19 89.0
MS.gene74446.t1 AT2G30140 26.797 306 203 9 7 303 14 307 3.07e-19 89.0
MS.gene74446.t1 AT2G36770 26.331 338 216 13 16 330 24 351 4.47e-19 88.6
MS.gene74446.t1 AT2G30140 26.797 306 202 10 7 303 14 306 8.02e-19 87.8
MS.gene74446.t1 AT1G10400 26.389 360 224 14 3 332 4 352 1.25e-18 87.4
MS.gene74446.t1 AT2G36780 26.087 345 222 12 9 330 17 351 1.28e-18 87.4
MS.gene74446.t1 AT3G55710 26.183 317 195 11 7 302 9 307 1.78e-18 86.7
MS.gene74446.t1 AT2G36800 24.773 331 219 10 16 324 22 344 2.02e-18 86.7
MS.gene74446.t1 AT4G34135 24.642 349 194 9 3 307 8 331 2.44e-18 85.1
MS.gene74446.t1 AT4G34135 24.713 348 193 9 3 306 8 330 2.80e-18 86.3
MS.gene74446.t1 AT1G22340 26.301 346 206 14 3 311 10 343 4.11e-18 85.9
MS.gene74446.t1 AT4G34131 25.150 334 201 9 3 302 7 325 9.30e-18 84.7
MS.gene74446.t1 AT5G38010 26.480 321 197 11 2 302 6 307 1.40e-17 84.0
MS.gene74446.t1 AT2G36750 25.225 333 219 11 16 326 20 344 1.50e-17 84.0
MS.gene74446.t1 AT3G02100 23.460 341 209 11 7 314 14 335 2.10e-17 83.6
MS.gene74446.t1 AT3G55700 24.606 317 204 10 3 302 5 303 2.50e-17 83.2
MS.gene74446.t1 AT5G14860 25.915 328 213 10 16 316 18 342 3.37e-17 83.2
MS.gene74446.t1 AT3G46690 25.538 325 207 12 1 308 1 307 3.62e-17 82.8
MS.gene74446.t1 AT1G22370 26.012 346 201 16 3 311 10 337 3.66e-17 82.8
MS.gene74446.t1 AT2G36760 25.360 347 222 13 9 330 17 351 8.00e-17 82.0
MS.gene74446.t1 AT3G46670 27.974 311 190 12 7 302 10 301 1.38e-16 80.9
MS.gene74446.t1 AT5G03490 26.852 324 185 13 7 302 20 319 1.92e-16 80.9
MS.gene74446.t1 AT2G15480 25.681 257 168 6 92 338 109 352 4.50e-16 79.7
MS.gene74446.t1 AT5G59590 25.159 314 203 10 3 302 7 302 4.51e-16 79.3
MS.gene74446.t1 AT2G15480 25.681 257 168 6 92 338 109 352 4.95e-16 79.7
MS.gene74446.t1 AT1G22380 26.724 348 197 17 2 308 9 339 6.67e-16 79.0
MS.gene74446.t1 AT2G36970 25.680 331 200 15 3 302 7 322 7.83e-16 79.0
MS.gene74446.t1 AT3G53160 25.786 318 203 10 9 302 11 319 8.58e-16 79.0
MS.gene74446.t1 AT2G16890 27.052 329 202 13 7 311 10 324 1.57e-15 77.8
MS.gene74446.t1 AT2G16890 26.748 329 203 13 7 311 10 324 1.66e-15 77.8
MS.gene74446.t1 AT5G37950 30.144 209 125 7 103 302 77 273 1.81e-15 77.0
MS.gene74446.t1 AT5G12890 26.154 325 200 13 7 304 11 322 2.94e-15 77.0
MS.gene74446.t1 AT4G15550 26.623 308 200 11 10 301 17 314 3.68e-15 77.0
MS.gene74446.t1 AT5G37950 29.808 208 133 6 103 302 77 279 7.65e-15 75.1
MS.gene74446.t1 AT2G30150 25.402 311 202 11 7 303 14 308 1.06e-14 75.5
MS.gene74446.t1 AT5G49690 23.952 334 223 11 2 317 6 326 1.71e-14 74.7
MS.gene74446.t1 AT2G30150 25.649 308 199 11 10 303 1 292 1.98e-14 74.3
MS.gene74446.t1 AT3G46680 25.378 331 201 13 1 310 4 309 2.00e-14 74.7
MS.gene74446.t1 AT5G38040 25.839 298 196 12 16 302 20 303 2.09e-14 74.3
MS.gene74446.t1 AT2G36790 26.254 339 217 12 9 324 16 344 4.31e-14 73.6
MS.gene74446.t1 AT3G46700 24.928 349 213 14 1 329 1 320 5.42e-14 73.2
MS.gene74446.t1 AT1G73880 25.595 336 213 14 4 317 12 332 6.93e-14 72.8
MS.gene74446.t1 AT5G59580 24.351 308 210 8 4 302 7 300 7.72e-14 72.8
MS.gene74446.t1 AT2G15490 24.412 340 223 11 16 330 17 347 1.39e-13 72.0
MS.gene74446.t1 AT1G22400 26.254 339 198 16 3 302 10 335 1.63e-13 72.0
MS.gene74446.t1 AT2G15490 24.437 311 204 10 16 301 17 321 2.17e-13 71.6
MS.gene74446.t1 AT1G78270 24.496 347 205 15 10 320 17 342 2.41e-13 71.2
MS.gene74446.t1 AT2G28080 29.412 187 121 6 124 302 142 325 2.54e-13 71.2
MS.gene74446.t1 AT1G51210 28.707 317 189 13 4 302 18 315 2.98e-13 70.9
MS.gene74446.t1 AT2G43820 25.836 329 190 14 3 306 4 303 4.85e-13 70.5
MS.gene74446.t1 AT1G22370 34.483 116 60 4 210 311 54 167 4.94e-13 69.3
MS.gene74446.t1 AT3G21560 26.019 319 205 13 7 302 13 323 5.43e-13 70.5
MS.gene74446.t1 AT2G31750 36.111 108 53 3 209 302 202 307 7.89e-13 69.7
MS.gene74446.t1 AT2G31750 36.111 108 53 3 209 302 202 307 8.15e-13 69.7
MS.gene74446.t1 AT2G23250 27.228 202 121 8 161 353 141 325 1.58e-12 68.6
MS.gene74446.t1 AT2G31790 26.818 220 117 8 111 302 106 309 2.57e-12 68.2
MS.gene74446.t1 AT3G53150 25.789 380 225 17 3 344 19 379 3.18e-12 68.2
MS.gene74446.t1 AT4G15500 25.633 316 211 10 7 306 10 317 6.28e-12 67.0
MS.gene74446.t1 AT2G23260 23.123 333 217 11 3 316 7 319 6.69e-12 67.0
MS.gene74446.t1 AT4G15480 24.051 316 213 10 7 304 20 326 8.15e-12 66.6
MS.gene74446.t1 AT1G05560 28.505 214 106 6 109 301 107 294 1.20e-11 66.2
MS.gene74446.t1 AT3G46660 26.688 311 202 12 4 302 12 308 1.43e-11 65.9
MS.gene74446.t1 AT1G24100 25.460 326 194 11 4 302 9 312 1.71e-11 65.5
MS.gene74446.t1 AT1G05560 28.505 214 106 6 109 301 157 344 1.72e-11 65.9
MS.gene74446.t1 AT3G11340 26.562 320 189 15 2 302 5 297 2.32e-11 65.1

Find 63 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATATTCATTGTGATTT+TGG 0.198018 6.4:+139056 None:intergenic
CAAACATGTCAATGTGTTTA+AGG 0.216637 6.4:-138394 MS.gene74446:CDS
TATGAATACTTTCACTGATT+TGG 0.217613 6.4:-138507 MS.gene74446:CDS
ATGAGTTTCATCTGTGTTGC+AGG 0.273051 6.4:+138902 None:intergenic
CAACTCAACGAGTTAGCTTT+TGG 0.298197 6.4:-138299 MS.gene74446:CDS
CATGATTCTCTTTATAGCTT+TGG 0.321735 6.4:+137893 None:intergenic
AAAAGAAAAGGTATGATAAA+AGG 0.327187 6.4:+138756 None:intergenic
TCTATCTTGAAGAACCCTTA+TGG 0.349429 6.4:+138475 None:intergenic
TACGAATCAGTAAATGTTCC+TGG 0.352828 6.4:-138650 MS.gene74446:CDS
TGAAGAACCCTTATGGCTTC+CGG 0.352971 6.4:+138482 None:intergenic
TTTACTTCTTCATGAAGAAA+TGG 0.370204 6.4:+138863 None:intergenic
ATCCGGTTGGACCTATCATT+AGG 0.380479 6.4:-138436 MS.gene74446:CDS
CTTGATCTTTCACAGATAAA+CGG 0.383472 6.4:+138590 None:intergenic
TTTCTTCTCTAGCATTGAAA+TGG 0.396312 6.4:-137773 MS.gene74446:CDS
TTTGACTCATTCCTAATGAT+AGG 0.405133 6.4:+138425 None:intergenic
CACATCAAGAATAGATTTGT+AGG 0.409793 6.4:+138562 None:intergenic
TACTTTCACTGATTTGGAAC+CGG 0.433060 6.4:-138501 MS.gene74446:CDS
ATTTGGAACCGGAAGCCATA+AGG 0.434669 6.4:-138490 MS.gene74446:CDS
GATGCAGCTTCATCAAGGTT+TGG 0.439628 6.4:+138695 None:intergenic
TAAGTGAGCATGGTTCTTCT+AGG 0.444274 6.4:-137803 MS.gene74446:CDS
TTGATCTTTCACAGATAAAC+GGG 0.449212 6.4:+138591 None:intergenic
AGAGAAACCTAGTGTTTATC+CGG 0.451664 6.4:-138453 MS.gene74446:CDS
GTCAATGTGTTTAAGGTGGT+TGG 0.454608 6.4:-138387 MS.gene74446:CDS
AGAACAGTGAAGTTCATGTT+TGG 0.465285 6.4:+138965 None:intergenic
GATTGCATGGAAGGAGTTAG+TGG 0.480920 6.4:+139007 None:intergenic
GAGTAGTCACAAATTCTTGT+GGG 0.481501 6.4:-138267 MS.gene74446:CDS
TTCAAGATGGATTGCATGGA+AGG 0.487127 6.4:+138998 None:intergenic
TTCCTAATGATAGGTCCAAC+CGG 0.502798 6.4:+138434 None:intergenic
ACAGTGAAGTTCATGTTTGG+TGG 0.503055 6.4:+138968 None:intergenic
AAGGTCTTCAATGTTGACTT+GGG 0.511276 6.4:+138940 None:intergenic
TTTGGAACCGGAAGCCATAA+GGG 0.516757 6.4:-138489 MS.gene74446:CDS
ATTGCTATGGTTCCTTCACC+TGG 0.517578 6.4:-139124 MS.gene74446:CDS
GGAATCAAATGGCTCAGTCC+AGG 0.518530 6.4:+139106 None:intergenic
ACATTCCTCATTCCCACACT+TGG 0.525207 6.4:-139031 MS.gene74446:CDS
AAACCTAGTGTTTATCCGGT+TGG 0.530377 6.4:-138449 MS.gene74446:CDS
GTGGACCAAGTGTGGGAATG+AGG 0.530898 6.4:+139026 None:intergenic
CAAAGCTATAAAGAGAATCA+TGG 0.536822 6.4:-137892 MS.gene74446:CDS
GAGTTGATGCAGCTTCATCA+AGG 0.540186 6.4:+138690 None:intergenic
AGGAGTTAGTGGACCAAGTG+TGG 0.541159 6.4:+139018 None:intergenic
CAGCTCCTGAGGAAAAGAAA+AGG 0.541604 6.4:+138744 None:intergenic
GAAGGTCTTCAATGTTGACT+TGG 0.545743 6.4:+138939 None:intergenic
CTTTCACAGATAAACGGGTC+GGG 0.549280 6.4:+138596 None:intergenic
AGTGTTCAAGATGGATTGCA+TGG 0.550670 6.4:+138994 None:intergenic
ACTCAACTAGTGGAATCAAA+TGG 0.555622 6.4:+139095 None:intergenic
CAGGTTCAAGATTATGTGGA+AGG 0.557674 6.4:+138921 None:intergenic
GTTGCAGGTTCAAGATTATG+TGG 0.560124 6.4:+138917 None:intergenic
AAAATCAAAGAATTGAGTGT+TGG 0.569192 6.4:-137840 MS.gene74446:CDS
GCTACTGTGCTAAGTGAGCA+TGG 0.572786 6.4:-137813 MS.gene74446:CDS
TGGTGGAAGAGTGTTCAAGA+TGG 0.583956 6.4:+138985 None:intergenic
TTTCGCAACATCATGTGCAT+CGG 0.587058 6.4:+138787 None:intergenic
AGTTTAGCAAACTCAACTAG+TGG 0.591982 6.4:+139085 None:intergenic
AAATGGCTCAGTCCAGGTGA+AGG 0.593894 6.4:+139112 None:intergenic
TGAGTAGTCACAAATTCTTG+TGG 0.594203 6.4:-138268 MS.gene74446:CDS
GGTCGGGAAGCTCTTTGATA+CGG 0.597353 6.4:+138612 None:intergenic
AGAGAATAAAACAGCTCCTG+AGG 0.607500 6.4:+138733 None:intergenic
TCTTTCACAGATAAACGGGT+CGG 0.613356 6.4:+138595 None:intergenic
GGAGTTAGTGGACCAAGTGT+GGG 0.621400 6.4:+139019 None:intergenic
GCTATAAAGAGAATCATGGA+AGG 0.638274 6.4:-137888 MS.gene74446:CDS
TGCTGAAAACTAAAGCAACT+AGG 0.645210 6.4:+138819 None:intergenic
AGGTCTTCAATGTTGACTTG+GGG 0.654290 6.4:+138941 None:intergenic
GGTCCAACCGGATAAACACT+AGG 0.660497 6.4:+138446 None:intergenic
ACATGTCAATGTGTTTAAGG+TGG 0.665783 6.4:-138391 MS.gene74446:CDS
GGAAGCTCTTTGATACGGAG+AGG 0.674985 6.4:+138617 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATTATCATTGTTTGA+TGG - chr6.4:138373-138392 MS.gene74446:CDS 20.0%
!!! AAAAGAAAAGGTATGATAAA+AGG + chr6.4:138156-138175 None:intergenic 20.0%
!!! TATGATATTCATTGTGATTT+TGG + chr6.4:137856-137875 None:intergenic 20.0%
! AAAATCAAAGAATTGAGTGT+TGG - chr6.4:139069-139088 MS.gene74446:CDS 25.0%
! TTGGAAAGAACAAAAGAAAA+TGG - chr6.4:138751-138770 MS.gene74446:CDS 25.0%
! TTTACTTCTTCATGAAGAAA+TGG + chr6.4:138049-138068 None:intergenic 25.0%
!! TATGAATACTTTCACTGATT+TGG - chr6.4:138402-138421 MS.gene74446:CDS 25.0%
!!! ATTGTTTTGTCCACTAAAAT+AGG + chr6.4:138701-138720 None:intergenic 25.0%
!!! GTATTTACCAAATGGTTTTT+TGG - chr6.4:138732-138751 MS.gene74446:CDS 25.0%
AACTGGGATTATAAAACAAG+AGG - chr6.4:138987-139006 MS.gene74446:CDS 30.0%
CAAACATGTCAATGTGTTTA+AGG - chr6.4:138515-138534 MS.gene74446:CDS 30.0%
CAAAGCTATAAAGAGAATCA+TGG - chr6.4:139017-139036 MS.gene74446:CDS 30.0%
CACATCAAGAATAGATTTGT+AGG + chr6.4:138350-138369 None:intergenic 30.0%
CATGATTCTCTTTATAGCTT+TGG + chr6.4:139019-139038 None:intergenic 30.0%
CCATTTGGTAAATACTCTAA+TGG + chr6.4:138727-138746 None:intergenic 30.0%
CTTGATCTTTCACAGATAAA+CGG + chr6.4:138322-138341 None:intergenic 30.0%
GAAAAAAACATGCATTGCTA+TGG - chr6.4:137772-137791 MS.gene74446:CDS 30.0%
GTTCTTTCCAAAAAACCATT+TGG + chr6.4:138742-138761 None:intergenic 30.0%
TTGATCTTTCACAGATAAAC+GGG + chr6.4:138321-138340 None:intergenic 30.0%
TTTGACTCATTCCTAATGAT+AGG + chr6.4:138487-138506 None:intergenic 30.0%
! CCATTAGAGTATTTACCAAA+TGG - chr6.4:138724-138743 MS.gene74446:CDS 30.0%
! TCTGTTCTTTTTGTCTCTTT+TGG - chr6.4:138562-138581 MS.gene74446:CDS 30.0%
! TTTCTTCTCTAGCATTGAAA+TGG - chr6.4:139136-139155 MS.gene74446:CDS 30.0%
!! AACAAAAGAAAATGGACTAG+TGG - chr6.4:138759-138778 MS.gene74446:CDS 30.0%
!! CAAAAGTTGATGATGAAACT+GGG - chr6.4:138971-138990 MS.gene74446:CDS 30.0%
ACAAAAAGAACAGAACTTGG+TGG + chr6.4:138556-138575 None:intergenic 35.0%
ACATGTCAATGTGTTTAAGG+TGG - chr6.4:138518-138537 MS.gene74446:CDS 35.0%
ACTCAACTAGTGGAATCAAA+TGG + chr6.4:137817-137836 None:intergenic 35.0%
AGAACAGTGAAGTTCATGTT+TGG + chr6.4:137947-137966 None:intergenic 35.0%
AGAGAAACCTAGTGTTTATC+CGG - chr6.4:138456-138475 MS.gene74446:CDS 35.0%
AGTTTAGCAAACTCAACTAG+TGG + chr6.4:137827-137846 None:intergenic 35.0%
ATCCTTTGTTCTGCAAACAA+TGG + chr6.4:138907-138926 None:intergenic 35.0%
ATTCTTGGTCATGGATCAAT+TGG - chr6.4:138808-138827 MS.gene74446:CDS 35.0%
GAGACAAAAAGAACAGAACT+TGG + chr6.4:138559-138578 None:intergenic 35.0%
GAGTAGTCACAAATTCTTGT+GGG - chr6.4:138642-138661 MS.gene74446:CDS 35.0%
GCAGAACTAGAATGTTTACT+TGG + chr6.4:138679-138698 None:intergenic 35.0%
GCTATAAAGAGAATCATGGA+AGG - chr6.4:139021-139040 MS.gene74446:CDS 35.0%
TACGAATCAGTAAATGTTCC+TGG - chr6.4:138259-138278 MS.gene74446:CDS 35.0%
TCTATCTTGAAGAACCCTTA+TGG + chr6.4:138437-138456 None:intergenic 35.0%
TGAGTAGTCACAAATTCTTG+TGG - chr6.4:138641-138660 MS.gene74446:CDS 35.0%
TGCTGAAAACTAAAGCAACT+AGG + chr6.4:138093-138112 None:intergenic 35.0%
! CCAGTTTCATCATCAACTTT+TGG + chr6.4:138973-138992 None:intergenic 35.0%
! TCATACCTTTTCTTTTCCTC+AGG - chr6.4:138160-138179 MS.gene74446:intron 35.0%
!! AAGGTCTTCAATGTTGACTT+GGG + chr6.4:137972-137991 None:intergenic 35.0%
!! CCAAAAGTTGATGATGAAAC+TGG - chr6.4:138970-138989 MS.gene74446:CDS 35.0%
!! CTTTTTGTCTCTTTTGGAAG+TGG - chr6.4:138568-138587 MS.gene74446:CDS 35.0%
!! TACTTTCACTGATTTGGAAC+CGG - chr6.4:138408-138427 MS.gene74446:CDS 35.0%
!!! GGTTTTTAAGTCATTGTGGT+TGG - chr6.4:138833-138852 MS.gene74446:CDS 35.0%
!!! TCTAGTTCTGCCTATTTTAG+TGG - chr6.4:138688-138707 MS.gene74446:CDS 35.0%
AAACCTAGTGTTTATCCGGT+TGG - chr6.4:138460-138479 MS.gene74446:CDS 40.0%
ACAGTGAAGTTCATGTTTGG+TGG + chr6.4:137944-137963 None:intergenic 40.0%
AGAGAATAAAACAGCTCCTG+AGG + chr6.4:138179-138198 None:intergenic 40.0%
ATGAGTTTCATCTGTGTTGC+AGG + chr6.4:138010-138029 None:intergenic 40.0%
CAGGTTCAAGATTATGTGGA+AGG + chr6.4:137991-138010 None:intergenic 40.0%
GTTGCAGGTTCAAGATTATG+TGG + chr6.4:137995-138014 None:intergenic 40.0%
TAAGTGAGCATGGTTCTTCT+AGG - chr6.4:139106-139125 MS.gene74446:CDS 40.0%
TCTTTCACAGATAAACGGGT+CGG + chr6.4:138317-138336 None:intergenic 40.0%
TGACCAAGAATCTCAACTTG+TGG + chr6.4:138799-138818 None:intergenic 40.0%
TTCCTAATGATAGGTCCAAC+CGG + chr6.4:138478-138497 None:intergenic 40.0%
TTGGTCATGGATCAATTGGT+GGG - chr6.4:138812-138831 MS.gene74446:CDS 40.0%
TTGTGGTTGGAGTTCAACTT+TGG - chr6.4:138846-138865 MS.gene74446:CDS 40.0%
TTTCGCAACATCATGTGCAT+CGG + chr6.4:138125-138144 None:intergenic 40.0%
! ACTTTGGAGAGTGTGGTTAA+CGG - chr6.4:138862-138881 MS.gene74446:CDS 40.0%
! CAACTAGGCGAGTTTTTGAA+AGG + chr6.4:138078-138097 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr6.4:138799-138818 MS.gene74446:CDS 40.0%
! GAAGGTCTTCAATGTTGACT+TGG + chr6.4:137973-137992 None:intergenic 40.0%
! GTCAATGTGTTTAAGGTGGT+TGG - chr6.4:138522-138541 MS.gene74446:CDS 40.0%
!! AGGTCTTCAATGTTGACTTG+GGG + chr6.4:137971-137990 None:intergenic 40.0%
!! AGTGTTCAAGATGGATTGCA+TGG + chr6.4:137918-137937 None:intergenic 40.0%
!! TTCAAGATGGATTGCATGGA+AGG + chr6.4:137914-137933 None:intergenic 40.0%
!! TTTGTCTCTTTTGGAAGTGG+TGG - chr6.4:138571-138590 MS.gene74446:CDS 40.0%
!!! CAACTCAACGAGTTAGCTTT+TGG - chr6.4:138610-138629 MS.gene74446:CDS 40.0%
!!! GGTGGGTTTTTAAGTCATTG+TGG - chr6.4:138829-138848 MS.gene74446:CDS 40.0%
ACATTCCTCATTCCCACACT+TGG - chr6.4:137878-137897 MS.gene74446:CDS 45.0%
ACTCACTGATGTGCTCAAAG+TGG - chr6.4:138939-138958 MS.gene74446:CDS 45.0%
ATCCGGTTGGACCTATCATT+AGG - chr6.4:138473-138492 MS.gene74446:CDS 45.0%
ATTGCTATGGTTCCTTCACC+TGG - chr6.4:137785-137804 MS.gene74446:CDS 45.0%
CAGCTCCTGAGGAAAAGAAA+AGG + chr6.4:138168-138187 None:intergenic 45.0%
CGGAGAGGAATAGAAAAACC+AGG + chr6.4:138280-138299 None:intergenic 45.0%
CTTGGTCATGGATCAATTGG+TGG - chr6.4:138811-138830 MS.gene74446:CDS 45.0%
CTTTCACAGATAAACGGGTC+GGG + chr6.4:138316-138335 None:intergenic 45.0%
GATGCAGCTTCATCAAGGTT+TGG + chr6.4:138217-138236 None:intergenic 45.0%
GATTGCATGGAAGGAGTTAG+TGG + chr6.4:137905-137924 None:intergenic 45.0%
GGCCATTGTTTGCAGAACAA+AGG - chr6.4:138902-138921 MS.gene74446:CDS 45.0%
TGAAGAACCCTTATGGCTTC+CGG + chr6.4:138430-138449 None:intergenic 45.0%
! ATTTGGAACCGGAAGCCATA+AGG - chr6.4:138419-138438 MS.gene74446:CDS 45.0%
! GAGTTCAACTTTGGAGAGTG+TGG - chr6.4:138855-138874 MS.gene74446:CDS 45.0%
! GCACCACAAGTTGAGATTCT+TGG - chr6.4:138793-138812 MS.gene74446:CDS 45.0%
! TTTGGAACCGGAAGCCATAA+GGG - chr6.4:138420-138439 MS.gene74446:CDS 45.0%
!! ATGGACTAGTGGTTGCATCA+TGG - chr6.4:138770-138789 MS.gene74446:CDS 45.0%
!! GAGTTGATGCAGCTTCATCA+AGG + chr6.4:138222-138241 None:intergenic 45.0%
!! TGGACTAGTGGTTGCATCAT+GGG - chr6.4:138771-138790 MS.gene74446:CDS 45.0%
!! TGGTGGAAGAGTGTTCAAGA+TGG + chr6.4:137927-137946 None:intergenic 45.0%
AAATGGCTCAGTCCAGGTGA+AGG + chr6.4:137800-137819 None:intergenic 50.0%
GCTACTGTGCTAAGTGAGCA+TGG - chr6.4:139096-139115 MS.gene74446:CDS 50.0%
GGAAGCTCTTTGATACGGAG+AGG + chr6.4:138295-138314 None:intergenic 50.0%
GGAATCAAATGGCTCAGTCC+AGG + chr6.4:137806-137825 None:intergenic 50.0%
GGTCCAACCGGATAAACACT+AGG + chr6.4:138466-138485 None:intergenic 50.0%
GGTCGGGAAGCTCTTTGATA+CGG + chr6.4:138300-138319 None:intergenic 50.0%
! AGGAGTTAGTGGACCAAGTG+TGG + chr6.4:137894-137913 None:intergenic 50.0%
! GGAGTTAGTGGACCAAGTGT+GGG + chr6.4:137893-137912 None:intergenic 50.0%
GTGGACCAAGTGTGGGAATG+AGG + chr6.4:137886-137905 None:intergenic 55.0%
! ACGGCGTGACGTTGATTGCA+TGG - chr6.4:138881-138900 MS.gene74446:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 137767 139164 137767 ID=MS.gene74446
chr6.4 mRNA 137767 139164 137767 ID=MS.gene74446.t1;Parent=MS.gene74446
chr6.4 exon 138252 139164 138252 ID=MS.gene74446.t1.exon1;Parent=MS.gene74446.t1
chr6.4 CDS 138252 139164 138252 ID=cds.MS.gene74446.t1;Parent=MS.gene74446.t1
chr6.4 exon 137767 137924 137767 ID=MS.gene74446.t1.exon2;Parent=MS.gene74446.t1
chr6.4 CDS 137767 137924 137767 ID=cds.MS.gene74446.t1;Parent=MS.gene74446.t1
Gene Sequence

>MS.gene74446

ATGGAGAAAAAAACATGCATTGCTATGGTTCCTTCACCTGGACTGAGCCATTTGATTCCACTAGTTGAGTTTGCTAAACTATTACTCCAAAATCACAATGAATATCATATCACATTCCTCATTCCCACACTTGGTCCACTAACTCCTTCCATGCAATCCATCTTGAACACTCTTCCACCAAACATGAACTTCACTGTTCTTCCCCAAGTCAACATTGAAGACCTTCCACATAATCTTGAACCTGCAACACAGATGAAACTCATAGTGAAACACTCTATTCCATTTCTTCATGAAGAAGTAAAATCACTCCTTTCAAAAACTCGCCTAGTTGCTTTAGTTTTCAGCATGTTTTCAACCGATGCACATGATGTTGCGAAACATTTCAACCTTTTATCATACCTTTTCTTTTCCTCAGGAGCTGTTTTATTCTCTTTATTTCTCACTATTCCAAACCTTGATGAAGCTGCATCAACTCAGTTCTTAGAATCAAGTTACGAATCAGTAAATGTTCCTGGTTTTTCTATTCCTCTCCGTATCAAAGAGCTTCCCGACCCGTTTATCTGTGAAAGATCAAGTGATACCTACAAATCTATTCTTGATGTGTGTCAAAAATTATCATTGTTTGATGGTGTTATTATGAATACTTTCACTGATTTGGAACCGGAAGCCATAAGGGTTCTTCAAGATAGAGAGAAACCTAGTGTTTATCCGGTTGGACCTATCATTAGGAATGAGTCAAATAATGAAGCAAACATGTCAATGTGTTTAAGGTGGTTGGAAAATCAGCCACCAAGTTCTGTTCTTTTTGTCTCTTTTGGAAGTGGTGGAACACTCTCTCAAGATCAACTCAACGAGTTAGCTTTTGGTCTAGAATTGAGTAGTCACAAATTCTTGTGGGTTGTGAGAGCTCCAAGTAAACATTCTAGTTCTGCCTATTTTAGTGGACAAAACAATGATCCATTAGAGTATTTACCAAATGGTTTTTTGGAAAGAACAAAAGAAAATGGACTAGTGGTTGCATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGATCAATTGGTGGGTTTTTAAGTCATTGTGGTTGGAGTTCAACTTTGGAGAGTGTGGTTAACGGCGTGACGTTGATTGCATGGCCATTGTTTGCAGAACAAAGGATGAATGCAAAATTACTCACTGATGTGCTCAAAGTGGCAGTGAGACCAAAAGTTGATGATGAAACTGGGATTATAAAACAAGAGGAAGTTGCCAAAGCTATAAAGAGAATCATGGAAGGAGATGAAAGCTTTGAAATTAGAAAGAAAATCAAAGAATTGAGTGTTGGTGCTGCTACTGTGCTAAGTGAGCATGGTTCTTCTAGGAAAGCACTTTCTTCTCTAGCATTGAAATGGCTTTAA

Protein sequence

>MS.gene74446.t1

MEKKTCIAMVPSPGLSHLIPLVEFAKLLLQNHNEYHITFLIPTLGPLTPSMQSILNTLPPNMNFTVLPQVNIEDLPHNLEPATQMKLIVKHSIPFLHEEVKSLLSKTRLVALVFSMFSTDAHDVAKHFNLLSYLFFSSGAVLFSLFLTIPNLDEAASTQFLESSYESVNVPGFSIPLRIKELPDPFICERSSDTYKSILDVCQKLSLFDGVIMNTFTDLEPEAIRVLQDREKPSVYPVGPIIRNESNNEANMSMCLRWLENQPPSSVLFVSFGSGGTLSQDQLNELAFGLELSSHKFLWVVRAPKEVAKAIKRIMEGDESFEIRKKIKELSVGAATVLSEHGSSRKALSSLALKWL