Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24542.t1 | XP_003589038.1 | 100 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 8.20E-147 | 529.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24542.t1 | Q9SGW3 | 83.5 | 267 | 44 | 0 | 1 | 267 | 1 | 267 | 1.7e-124 | 446.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24542.t1 | B7FL82 | 100.0 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 5.9e-147 | 529.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051630 | MS.gene24542 | 0.953059 | 6.30E-111 | -1.69E-46 |
| MS.gene056063 | MS.gene24542 | 0.831408 | 1.70E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24542.t1 | MTR_1g016750 | 100.000 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24542.t1 | AT1G64520 | 83.521 | 267 | 44 | 0 | 1 | 267 | 1 | 267 | 4.37e-159 | 442 |
| MS.gene24542.t1 | AT5G42040 | 62.921 | 267 | 65 | 2 | 1 | 267 | 1 | 233 | 6.97e-113 | 324 |
Find 67 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGAAACTTCTGTGAATT+TGG | 0.038934 | 1.2:+5995738 | None:intergenic |
| CCGTTCTTGATTTCCCATTC+AGG | 0.264023 | 1.2:+5990996 | None:intergenic |
| CACTTGCAGGTGTTACTAAC+AGG | 0.267676 | 1.2:-5994524 | MS.gene24542:intron |
| GGAGTTGGAGCAATCCTTTA+TGG | 0.271340 | 1.2:-5991748 | MS.gene24542:CDS |
| TGTGTATTTCATGGATCTTT+TGG | 0.284808 | 1.2:-5991670 | MS.gene24542:CDS |
| TTCCAAGAGTTCCTGGTCTT+TGG | 0.286082 | 1.2:+5991215 | None:intergenic |
| AAATCTCCTTTCCCAGCTTA+AGG | 0.331927 | 1.2:-5995662 | MS.gene24542:intron |
| GTTAGCTCTTGAACTGCATT+AGG | 0.332972 | 1.2:+5994467 | None:intergenic |
| GGAACTCTTGGAATATATTA+AGG | 0.340067 | 1.2:-5991205 | MS.gene24542:CDS |
| TGCTGAATTCCATACTGAAT+TGG | 0.350776 | 1.2:-5991820 | MS.gene24542:CDS |
| TGAGAAACTTCTGTGAATTT+GGG | 0.351752 | 1.2:+5995739 | None:intergenic |
| CCCTAGCATAACTAAGTGTT+TGG | 0.361635 | 1.2:+5990904 | None:intergenic |
| TAATATATTCCAAGAGTTCC+TGG | 0.370117 | 1.2:+5991208 | None:intergenic |
| TGGGTACTCCTGAGGAGATT+GGG | 0.370608 | 1.2:+5991887 | None:intergenic |
| GTGTTTGGTTGATGAGTTGC+AGG | 0.382114 | 1.2:+5990919 | None:intergenic |
| TGAGACTTCTTGTGCAGAAT+AGG | 0.396052 | 1.2:-5991845 | MS.gene24542:CDS |
| CGTTCTTGATTTCCCATTCA+GGG | 0.400779 | 1.2:+5990997 | None:intergenic |
| TGAAACATATGTGTATTTCA+TGG | 0.407221 | 1.2:-5991679 | MS.gene24542:CDS |
| AAAGCAATTCCAATTCAGTA+TGG | 0.408550 | 1.2:+5991811 | None:intergenic |
| TTGGGTACTCCTGAGGAGAT+TGG | 0.426130 | 1.2:+5991886 | None:intergenic |
| CACCAAAGACCAGGAACTCT+TGG | 0.427127 | 1.2:-5991217 | MS.gene24542:CDS |
| TACCGTGCATCAGTGTAGTA+AGG | 0.430307 | 1.2:+5992166 | None:intergenic |
| ATTGCTTTCATCCACTGCTC+TGG | 0.436359 | 1.2:-5991796 | MS.gene24542:CDS |
| GTTGTATGCCCCTTCCATAA+AGG | 0.451259 | 1.2:+5991734 | None:intergenic |
| CCTCAGGAGTACCCAATACT+TGG | 0.457349 | 1.2:-5991879 | MS.gene24542:CDS |
| ACAGGTTGAGACCAAGTATT+GGG | 0.478577 | 1.2:+5991868 | None:intergenic |
| GGTTAGAGTGTACCTTAAGC+TGG | 0.480510 | 1.2:+5995650 | None:intergenic |
| TCTGCACAAGAAGTCTCAAC+AGG | 0.487747 | 1.2:+5991850 | None:intergenic |
| ACTTAGTTATGCTAGGGAGT+TGG | 0.495838 | 1.2:-5990898 | MS.gene24542:CDS |
| TATTAAGCATGCCGTGGAGT+TGG | 0.497949 | 1.2:-5991763 | MS.gene24542:CDS |
| GATTTCAGGAGCACCCTGAA+TGG | 0.499374 | 1.2:-5991010 | MS.gene24542:intron |
| ATTTCAGGAGCACCCTGAAT+GGG | 0.504260 | 1.2:-5991009 | MS.gene24542:intron |
| TCGTCTTCCCCAATCTCCTC+AGG | 0.513848 | 1.2:-5991895 | MS.gene24542:CDS |
| AGGGAGGGTATTTCTTTGCA+AGG | 0.516901 | 1.2:+5990939 | None:intergenic |
| TTGAAAGAAATCTCTTTCAA+AGG | 0.524033 | 1.2:+5992195 | None:intergenic |
| TGGTTGATGAGTTGCAGGGA+GGG | 0.525378 | 1.2:+5990924 | None:intergenic |
| GGAGCAATCCTTTATGGAAG+GGG | 0.535947 | 1.2:-5991742 | MS.gene24542:CDS |
| TTGGAGCAATCCTTTATGGA+AGG | 0.551519 | 1.2:-5991744 | MS.gene24542:CDS |
| ATTAGGTGTATCTGCAAACA+AGG | 0.554484 | 1.2:+5994484 | None:intergenic |
| AACAGGTTGAGACCAAGTAT+TGG | 0.562540 | 1.2:+5991867 | None:intergenic |
| GTTAGAGTGTACCTTAAGCT+GGG | 0.574520 | 1.2:+5995651 | None:intergenic |
| TGGAGCAATCCTTTATGGAA+GGG | 0.575444 | 1.2:-5991743 | MS.gene24542:CDS |
| ACGTTCAGAGATGAGATAGC+AGG | 0.577525 | 1.2:-5991300 | MS.gene24542:intron |
| GATAGCAGGATGCAGTGAGA+AGG | 0.587670 | 1.2:-5991286 | MS.gene24542:CDS |
| CCAAACACTTAGTTATGCTA+GGG | 0.588753 | 1.2:-5990904 | MS.gene24542:CDS |
| TATCTGCAAACAAGGGTGGA+AGG | 0.590332 | 1.2:+5994492 | None:intergenic |
| GGGTACTCCTGAGGAGATTG+GGG | 0.592535 | 1.2:+5991888 | None:intergenic |
| ACCAAACACTTAGTTATGCT+AGG | 0.593116 | 1.2:-5990905 | MS.gene24542:CDS |
| TCCACGGCATGCTTAATACA+AGG | 0.594862 | 1.2:+5991768 | None:intergenic |
| TTGGTTGATGAGTTGCAGGG+AGG | 0.604694 | 1.2:+5990923 | None:intergenic |
| AGTGTACCTTAAGCTGGGAA+AGG | 0.604789 | 1.2:+5995656 | None:intergenic |
| TGTTTGGTTGATGAGTTGCA+GGG | 0.615391 | 1.2:+5990920 | None:intergenic |
| GGTGTATCTGCAAACAAGGG+TGG | 0.618117 | 1.2:+5994488 | None:intergenic |
| ACAAGGATTCTCCAGAGCAG+TGG | 0.619513 | 1.2:+5991785 | None:intergenic |
| AAAGGATTGCTCCAACTCCA+CGG | 0.630188 | 1.2:+5991752 | None:intergenic |
| GTTATGCTAGGGAGTTGGAG+AGG | 0.631284 | 1.2:-5990893 | MS.gene24542:CDS |
| ACTTGCAGGTGTTACTAACA+GGG | 0.633305 | 1.2:-5994523 | MS.gene24542:intron |
| AACCTTACTACACTGATGCA+CGG | 0.640807 | 1.2:-5992168 | MS.gene24542:intron |
| TCTGTCGAGCACTCAAGACA+CGG | 0.643446 | 1.2:+5991712 | None:intergenic |
| TCCTTGTATTAAGCATGCCG+TGG | 0.644930 | 1.2:-5991769 | MS.gene24542:CDS |
| CCAAGTATTGGGTACTCCTG+AGG | 0.648239 | 1.2:+5991879 | None:intergenic |
| GTTGCTGTTCACCAAAGACC+AGG | 0.651601 | 1.2:-5991226 | MS.gene24542:CDS |
| AAATACACATATGTTTCATG+TGG | 0.652663 | 1.2:+5991684 | None:intergenic |
| ACTCTTGGAATATATTAAGG+AGG | 0.657443 | 1.2:-5991202 | MS.gene24542:intron |
| CCTGAATGGGAAATCAAGAA+CGG | 0.657945 | 1.2:-5990996 | MS.gene24542:CDS |
| CTGGGAAAGGAGATTTGAAG+CGG | 0.672348 | 1.2:+5995669 | None:intergenic |
| TTAGGTGTATCTGCAAACAA+GGG | 0.724231 | 1.2:+5994485 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTAAAAAAAAAAATA+CGG | + | chr1.2:5992323-5992342 | None:intergenic | 0.0% |
| !! | AAGTAAAAAAAATAAATAGA+TGG | + | chr1.2:5995069-5995088 | None:intergenic | 10.0% |
| !! | ATTTGTATAAAAAAATTAAG+AGG | - | chr1.2:5991137-5991156 | MS.gene24542:intron | 10.0% |
| !! | TATATGTATATTACTAAAAT+AGG | + | chr1.2:5993769-5993788 | None:intergenic | 10.0% |
| !! | TTTGTATAAAAAAATTAAGA+GGG | - | chr1.2:5991138-5991157 | MS.gene24542:intron | 10.0% |
| !!! | AAATTAATTATGTCAATTTT+GGG | - | chr1.2:5991074-5991093 | MS.gene24542:intron | 10.0% |
| !!! | ATAGTTTTTATTTCTAAAAT+TGG | - | chr1.2:5992608-5992627 | MS.gene24542:intron | 10.0% |
| !!! | TAAATTAATTATGTCAATTT+TGG | - | chr1.2:5991073-5991092 | MS.gene24542:intron | 10.0% |
| !!! | TTTATTTTGTATAATTGATA+TGG | + | chr1.2:5994218-5994237 | None:intergenic | 10.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | + | chr1.2:5992793-5992812 | None:intergenic | 15.0% |
| !! | AATCTTAAATTAAATTAGGT+TGG | - | chr1.2:5993982-5994001 | MS.gene24542:intron | 15.0% |
| !! | AATTATTTCATAATCAATTC+TGG | - | chr1.2:5993914-5993933 | MS.gene24542:intron | 15.0% |
| !! | AGTGAATCTTAAATTAAATT+AGG | - | chr1.2:5993978-5993997 | MS.gene24542:intron | 15.0% |
| !! | ATTACTAATAACACAAAATA+CGG | + | chr1.2:5993701-5993720 | None:intergenic | 15.0% |
| !! | TTGTATAAAAAAATTAAGAG+GGG | - | chr1.2:5991139-5991158 | MS.gene24542:intron | 15.0% |
| !!! | AAGAGTTTTTATACTAAAAT+TGG | - | chr1.2:5994143-5994162 | MS.gene24542:intron | 15.0% |
| !!! | CACTAAAATCTTTTATTTTT+AGG | + | chr1.2:5991602-5991621 | None:intergenic | 15.0% |
| !!! | CTAAAAATAAAAGATTTTAG+TGG | - | chr1.2:5991600-5991619 | MS.gene24542:intron | 15.0% |
| !!! | CTAAAATATGTTTCTTTTAT+AGG | + | chr1.2:5991365-5991384 | None:intergenic | 15.0% |
| !!! | TAACATAATTGATTTATGTT+TGG | + | chr1.2:5993858-5993877 | None:intergenic | 15.0% |
| !!! | TATTGTAAATGACATTTTAA+TGG | - | chr1.2:5992392-5992411 | MS.gene24542:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | - | chr1.2:5992792-5992811 | MS.gene24542:intron | 15.0% |
| !! | AAATTCTCGACAAATAATTA+TGG | + | chr1.2:5991990-5992009 | None:intergenic | 20.0% |
| !! | AGATATACTAATTATAGAAC+CGG | + | chr1.2:5995596-5995615 | None:intergenic | 20.0% |
| !! | ATATGAGTGAATCTTAAATT+AGG | - | chr1.2:5992366-5992385 | MS.gene24542:intron | 20.0% |
| !! | CAAAGAAAAAGTAAAAATAC+AGG | + | chr1.2:5992274-5992293 | None:intergenic | 20.0% |
| !! | TAATAAACTCAGTTATTGTA+GGG | - | chr1.2:5991945-5991964 | MS.gene24542:intron | 20.0% |
| !! | TGTATAATTGATATGGAAAA+TGG | + | chr1.2:5994211-5994230 | None:intergenic | 20.0% |
| !! | TGTGTTAATTTATGATGTTT+GGG | + | chr1.2:5993814-5993833 | None:intergenic | 20.0% |
| !! | TTAATAAACTCAGTTATTGT+AGG | - | chr1.2:5991944-5991963 | MS.gene24542:intron | 20.0% |
| !! | TTATGGAAAACTAAATGATA+AGG | + | chr1.2:5991973-5991992 | None:intergenic | 20.0% |
| !! | TTGTGTTAATTTATGATGTT+TGG | + | chr1.2:5993815-5993834 | None:intergenic | 20.0% |
| !!! | AAAAGAAACATATTTTAGAG+AGG | - | chr1.2:5991367-5991386 | MS.gene24542:intron | 20.0% |
| !!! | ATTTTTTTTACTTCTGAAGT+TGG | - | chr1.2:5995076-5995095 | MS.gene24542:intron | 20.0% |
| !!! | GATAGATAAATTTTTCTATC+TGG | - | chr1.2:5994047-5994066 | MS.gene24542:intron | 20.0% |
| ! | AAATACACATATGTTTCATG+TGG | + | chr1.2:5994948-5994967 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr1.2:5993536-5993555 | MS.gene24542:intron | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | + | chr1.2:5992786-5992805 | None:intergenic | 25.0% |
| ! | AATTAATATGATCGAGTCAT+GGG | + | chr1.2:5994257-5994276 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | + | chr1.2:5992785-5992804 | None:intergenic | 25.0% |
| ! | ATAACCTAATGACCTAAATA+AGG | - | chr1.2:5991251-5991270 | MS.gene24542:CDS | 25.0% |
| ! | CACTCATATGATATTTGATA+AGG | + | chr1.2:5992355-5992374 | None:intergenic | 25.0% |
| ! | CTACAAGGTAATATACTATA+AGG | + | chr1.2:5994595-5994614 | None:intergenic | 25.0% |
| ! | GATATTCTTGTGAAGTAAAA+TGG | - | chr1.2:5991410-5991429 | MS.gene24542:intron | 25.0% |
| ! | TAATTAATATGATCGAGTCA+TGG | + | chr1.2:5994258-5994277 | None:intergenic | 25.0% |
| ! | TCATATGATATTTGATAAGG+TGG | + | chr1.2:5992352-5992371 | None:intergenic | 25.0% |
| ! | TGAAACATATGTGTATTTCA+TGG | - | chr1.2:5994950-5994969 | MS.gene24542:intron | 25.0% |
| ! | TGTTGAGCTATTGTAATTTA+TGG | - | chr1.2:5994688-5994707 | MS.gene24542:intron | 25.0% |
| ! | TTAAAATAGTACCTAATTGC+TGG | - | chr1.2:5992031-5992050 | MS.gene24542:intron | 25.0% |
| ! | TTATAATAATGGTTGTGCTT+CGG | + | chr1.2:5995224-5995243 | None:intergenic | 25.0% |
| ! | TTGAAAGAAATCTCTTTCAA+AGG | + | chr1.2:5994437-5994456 | None:intergenic | 25.0% |
| !! | AATTTTTACACTAAGGACAA+CGG | + | chr1.2:5994401-5994420 | None:intergenic | 25.0% |
| !! | ATTGTGTACTTGTTAACAAA+GGG | + | chr1.2:5994501-5994520 | None:intergenic | 25.0% |
| !! | CTTCTTGTTGAAAATTTTCA+GGG | - | chr1.2:5994359-5994378 | MS.gene24542:intron | 25.0% |
| !! | CTTGATACTTGTTAGTTATT+GGG | - | chr1.2:5991708-5991727 | MS.gene24542:CDS | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr1.2:5993519-5993538 | None:intergenic | 25.0% |
| !! | TATTGTGTACTTGTTAACAA+AGG | + | chr1.2:5994502-5994521 | None:intergenic | 25.0% |
| !! | TCTTCTTGTTGAAAATTTTC+AGG | - | chr1.2:5994358-5994377 | MS.gene24542:intron | 25.0% |
| !! | TCTTGATACTTGTTAGTTAT+TGG | - | chr1.2:5991707-5991726 | MS.gene24542:CDS | 25.0% |
| !! | TGAATATAATTGCGCATTTT+GGG | - | chr1.2:5991459-5991478 | MS.gene24542:intron | 25.0% |
| !! | TTCTTGTTGAAAATTTTCAG+GGG | - | chr1.2:5994360-5994379 | MS.gene24542:intron | 25.0% |
| !! | TTTTCAATGTGACTTTTTAG+TGG | - | chr1.2:5992075-5992094 | MS.gene24542:intron | 25.0% |
| !!! | AAATAAAAGATTTTAGTGGC+AGG | - | chr1.2:5991604-5991623 | MS.gene24542:intron | 25.0% |
| !!! | AAATTAAATTAGGTTGGAAG+AGG | - | chr1.2:5993988-5994007 | MS.gene24542:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr1.2:5993394-5993413 | MS.gene24542:intron | 25.0% |
| !!! | TGACAAATACTGTATTTTAG+AGG | - | chr1.2:5994108-5994127 | MS.gene24542:intron | 25.0% |
| !!! | TTAGTATATCTACTGATTTC+AGG | - | chr1.2:5995605-5995624 | MS.gene24542:intron | 25.0% |
| AAAACACCATAGAAACTGAA+TGG | + | chr1.2:5992211-5992230 | None:intergenic | 30.0% | |
| AAACTTTGTCTAACCGTTTA+AGG | + | chr1.2:5991870-5991889 | None:intergenic | 30.0% | |
| AAAGAAACTAGGGTTTAGTA+GGG | + | chr1.2:5991003-5991022 | None:intergenic | 30.0% | |
| AAAGCAATTCCAATTCAGTA+TGG | + | chr1.2:5994821-5994840 | None:intergenic | 30.0% | |
| AACTAGTTAGCAAATTGACA+TGG | + | chr1.2:5995298-5995317 | None:intergenic | 30.0% | |
| ACATAAGTGTTTGTGAGAAA+CGG | - | chr1.2:5991505-5991524 | MS.gene24542:intron | 30.0% | |
| ACTCTTGGAATATATTAAGG+AGG | - | chr1.2:5995427-5995446 | MS.gene24542:intron | 30.0% | |
| AGATAGATAACTGTTCTATC+TGG | - | chr1.2:5992636-5992655 | MS.gene24542:intron | 30.0% | |
| AGCAATAGTTTCCTTTCTAT+TGG | + | chr1.2:5991673-5991692 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | + | chr1.2:5993055-5993074 | None:intergenic | 30.0% | |
| ATCTATCTTTCTTACTACCA+TGG | + | chr1.2:5994034-5994053 | None:intergenic | 30.0% | |
| ATTGAACTCAACCGTTAAAT+TGG | - | chr1.2:5995039-5995058 | MS.gene24542:intron | 30.0% | |
| CAAGAAAGCAAATAATGAGT+TGG | + | chr1.2:5994670-5994689 | None:intergenic | 30.0% | |
| CTAATGACCTAAATAAGGAA+CGG | - | chr1.2:5991256-5991275 | MS.gene24542:CDS | 30.0% | |
| GAGCTTCAAGGTTATAATAA+TGG | + | chr1.2:5995235-5995254 | None:intergenic | 30.0% | |
| GATAATACTTTCACGTTTCT+TGG | + | chr1.2:5994624-5994643 | None:intergenic | 30.0% | |
| GCAATAGTTTCCTTTCTATT+GGG | + | chr1.2:5991672-5991691 | None:intergenic | 30.0% | |
| GGAAAAACAATATACAACAG+AGG | + | chr1.2:5995263-5995282 | None:intergenic | 30.0% | |
| GGAACTCTTGGAATATATTA+AGG | - | chr1.2:5995424-5995443 | MS.gene24542:intron | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr1.2:5993576-5993595 | None:intergenic | 30.0% | |
| GTTTCTTGGTATATACTACA+AGG | + | chr1.2:5994610-5994629 | None:intergenic | 30.0% | |
| TAAGATAATAACTGCTTGTC+AGG | - | chr1.2:5994285-5994304 | MS.gene24542:intron | 30.0% | |
| TAATATATTCCAAGAGTTCC+TGG | + | chr1.2:5995424-5995443 | None:intergenic | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | - | chr1.2:5992963-5992982 | MS.gene24542:intron | 30.0% | |
| TAGATGGAGTTCCAATTTAA+CGG | + | chr1.2:5995053-5995072 | None:intergenic | 30.0% | |
| TAGTTCCTGCAATGAAAATT+TGG | - | chr1.2:5995198-5995217 | MS.gene24542:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr1.2:5993583-5993602 | MS.gene24542:intron | 30.0% | |
| TGACAACAATTATTACCTGA+TGG | + | chr1.2:5994991-5995010 | None:intergenic | 30.0% | |
| TGAGAAACTTCTGTGAATTT+GGG | + | chr1.2:5990893-5990912 | None:intergenic | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | - | chr1.2:5992983-5993002 | MS.gene24542:intron | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr1.2:5993580-5993599 | MS.gene24542:intron | 30.0% | |
| TGTCCTTAGTGTAAAAATTG+AGG | - | chr1.2:5994402-5994421 | MS.gene24542:intron | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | - | chr1.2:5993058-5993077 | MS.gene24542:intron | 30.0% | |
| TTCATTCCATTCAGTTTCTA+TGG | - | chr1.2:5992202-5992221 | MS.gene24542:CDS | 30.0% | |
| TTCCTTTCTATTGGGTATTA+GGG | + | chr1.2:5991664-5991683 | None:intergenic | 30.0% | |
| TTGTGAAGTAAAATGGTTGT+GGG | - | chr1.2:5991417-5991436 | MS.gene24542:intron | 30.0% | |
| TTGTTAGTTATTGGGCTTAT+AGG | - | chr1.2:5991716-5991735 | MS.gene24542:CDS | 30.0% | |
| TTTAAAGACTATAGCCAGTT+TGG | + | chr1.2:5992016-5992035 | None:intergenic | 30.0% | |
| TTTCCTTTCTATTGGGTATT+AGG | + | chr1.2:5991665-5991684 | None:intergenic | 30.0% | |
| TTTCTCACAAACACTTATGT+GGG | + | chr1.2:5991505-5991524 | None:intergenic | 30.0% | |
| ! | AACACACAGCATTGAAATTA+GGG | + | chr1.2:5991030-5991049 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr1.2:5993541-5993560 | None:intergenic | 30.0% |
| ! | GATCCTCAATTTTTACACTA+AGG | + | chr1.2:5994408-5994427 | None:intergenic | 30.0% |
| ! | GTGAATATAATTGCGCATTT+TGG | - | chr1.2:5991458-5991477 | MS.gene24542:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr1.2:5993390-5993409 | None:intergenic | 30.0% |
| ! | TGTCTATTTTCAAAAGGCAA+AGG | - | chr1.2:5995659-5995678 | MS.gene24542:intron | 30.0% |
| ! | TGTGTATTTCATGGATCTTT+TGG | - | chr1.2:5994959-5994978 | MS.gene24542:intron | 30.0% |
| ! | TGTTAGAGAAATTAGTTTCG+AGG | + | chr1.2:5995129-5995148 | None:intergenic | 30.0% |
| ! | TTGTGTACTTGTTAACAAAG+GGG | + | chr1.2:5994500-5994519 | None:intergenic | 30.0% |
| !! | AAGATGGTTTTTCAGAAACT+GGG | - | chr1.2:5991287-5991306 | MS.gene24542:CDS | 30.0% |
| !! | CATTTTTCCGTTCCTTATTT+AGG | + | chr1.2:5991266-5991285 | None:intergenic | 30.0% |
| !! | TAAGATGGTTTTTCAGAAAC+TGG | - | chr1.2:5991286-5991305 | MS.gene24542:CDS | 30.0% |
| !!! | CATGTCTATTGTTTTAGATC+CGG | + | chr1.2:5994552-5994571 | None:intergenic | 30.0% |
| !!! | GACATTTTAATGGATTATCC+TGG | - | chr1.2:5992402-5992421 | MS.gene24542:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | - | chr1.2:5992804-5992823 | MS.gene24542:intron | 30.0% |
| AAACTGGGTTTACTCTTGAT+TGG | - | chr1.2:5991302-5991321 | MS.gene24542:intron | 35.0% | |
| AACCCTAATACCCAATAGAA+AGG | - | chr1.2:5991659-5991678 | MS.gene24542:CDS | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | - | chr1.2:5992991-5993010 | MS.gene24542:intron | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr1.2:5993192-5993211 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr1.2:5993464-5993483 | MS.gene24542:intron | 35.0% | |
| AAGGCAATAGTTAAGTGATC+AGG | + | chr1.2:5994576-5994595 | None:intergenic | 35.0% | |
| ACCAAACACTTAGTTATGCT+AGG | - | chr1.2:5995724-5995743 | MS.gene24542:CDS | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | - | chr1.2:5992992-5993011 | MS.gene24542:intron | 35.0% | |
| AGAAAGAATCACCAGCAATT+AGG | + | chr1.2:5992045-5992064 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr1.2:5993331-5993350 | MS.gene24542:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr1.2:5993548-5993567 | MS.gene24542:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr1.2:5993383-5993402 | MS.gene24542:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr1.2:5993196-5993215 | MS.gene24542:intron | 35.0% | |
| AGGAACGGAAAAATGTAAGA+TGG | - | chr1.2:5991271-5991290 | MS.gene24542:CDS | 35.0% | |
| AGGAGAATGAACAAAGAGAA+AGG | + | chr1.2:5992727-5992746 | None:intergenic | 35.0% | |
| ATAAGTGTTTGTGAGAAACG+GGG | - | chr1.2:5991507-5991526 | MS.gene24542:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr1.2:5993043-5993062 | MS.gene24542:intron | 35.0% | |
| ATTAGGGTAGGAAAGAAACT+AGG | + | chr1.2:5991014-5991033 | None:intergenic | 35.0% | |
| ATTAGGTGTATCTGCAAACA+AGG | + | chr1.2:5992148-5992167 | None:intergenic | 35.0% | |
| CATAAGTGTTTGTGAGAAAC+GGG | - | chr1.2:5991506-5991525 | MS.gene24542:intron | 35.0% | |
| CCAAACACTTAGTTATGCTA+GGG | - | chr1.2:5995725-5995744 | MS.gene24542:CDS | 35.0% | |
| CTAGAAGCTAAATCCTAACT+GGG | + | chr1.2:5991785-5991804 | None:intergenic | 35.0% | |
| CTGAGAAACTTCTGTGAATT+TGG | + | chr1.2:5990894-5990913 | None:intergenic | 35.0% | |
| CTTGTGAAGTAAAATGGTTG+TGG | - | chr1.2:5991416-5991435 | MS.gene24542:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr1.2:5993408-5993427 | MS.gene24542:intron | 35.0% | |
| GAAAGAAACTAGGGTTTAGT+AGG | + | chr1.2:5991004-5991023 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | + | chr1.2:5993056-5993075 | None:intergenic | 35.0% | |
| GGAGAATGAACAAAGAGAAA+GGG | + | chr1.2:5992726-5992745 | None:intergenic | 35.0% | |
| GGCTTATCAAGTAAAAGCAA+AGG | + | chr1.2:5995542-5995561 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr1.2:5993461-5993480 | MS.gene24542:intron | 35.0% | |
| GTCCTATTGTTATGGGAAAA+AGG | + | chr1.2:5992747-5992766 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | - | chr1.2:5993057-5993076 | MS.gene24542:intron | 35.0% | |
| GTTTCTCACAAACACTTATG+TGG | + | chr1.2:5991506-5991525 | None:intergenic | 35.0% | |
| TAATCTCAGACTGTTGAATC+CGG | - | chr1.2:5994530-5994549 | MS.gene24542:intron | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | - | chr1.2:5993118-5993137 | MS.gene24542:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | + | chr1.2:5993054-5993073 | None:intergenic | 35.0% | |
| TGATTCTTTGCCTATGAGAA+AGG | - | chr1.2:5991844-5991863 | MS.gene24542:CDS | 35.0% | |
| TGCTGAATTCCATACTGAAT+TGG | - | chr1.2:5994809-5994828 | MS.gene24542:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr1.2:5993403-5993422 | MS.gene24542:intron | 35.0% | |
| TTAAGAGGGGTTGTTAGAAA+CGG | - | chr1.2:5991152-5991171 | MS.gene24542:intron | 35.0% | |
| TTAGGGTAGGAAAGAAACTA+GGG | + | chr1.2:5991013-5991032 | None:intergenic | 35.0% | |
| TTAGGTGTATCTGCAAACAA+GGG | + | chr1.2:5992147-5992166 | None:intergenic | 35.0% | |
| TTGACATGGATGTGCAAATA+TGG | + | chr1.2:5995284-5995303 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr1.2:5993460-5993479 | None:intergenic | 35.0% | |
| TTTCTTACTACCATGGTTTG+AGG | + | chr1.2:5994027-5994046 | None:intergenic | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr1.2:5993183-5993202 | MS.gene24542:intron | 35.0% |
| ! | AACGGTGTTTTACTCTTGAT+TGG | - | chr1.2:5991170-5991189 | MS.gene24542:intron | 35.0% |
| ! | CAACACACAGCATTGAAATT+AGG | + | chr1.2:5991031-5991050 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr1.2:5993560-5993579 | MS.gene24542:intron | 35.0% |
| ! | CGGTTCTGTCTATTTTCAAA+AGG | - | chr1.2:5995653-5995672 | MS.gene24542:intron | 35.0% |
| ! | CGTTCCTTATTTAGGTCATT+AGG | + | chr1.2:5991258-5991277 | None:intergenic | 35.0% |
| ! | CTCCTTTTTCCCATAACAAT+AGG | - | chr1.2:5992742-5992761 | MS.gene24542:intron | 35.0% |
| ! | TAACCTTTCTGTCTGGTTTA+AGG | - | chr1.2:5992528-5992547 | MS.gene24542:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | + | chr1.2:5992850-5992869 | None:intergenic | 35.0% |
| ! | TGGGTAGTTTGCATCAAAAT+TGG | + | chr1.2:5993795-5993814 | None:intergenic | 35.0% |
| !! | AGGATTTAGCTTCTAGCTTA+TGG | - | chr1.2:5991789-5991808 | MS.gene24542:CDS | 35.0% |
| !! | CATGCTTTGAAGAACAAAAC+AGG | + | chr1.2:5992495-5992514 | None:intergenic | 35.0% |
| !! | CTGTTTTGTTCTTCAAAGCA+TGG | - | chr1.2:5992493-5992512 | MS.gene24542:intron | 35.0% |
| !! | GGATTTAGCTTCTAGCTTAT+GGG | - | chr1.2:5991790-5991809 | MS.gene24542:CDS | 35.0% |
| !! | TACGGATTAGAAAACAATGC+AGG | + | chr1.2:5993683-5993702 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr1.2:5993085-5993104 | None:intergenic | 35.0% |
| !! | TTGTTTTGTTCCTCAAACCA+TGG | - | chr1.2:5994014-5994033 | MS.gene24542:intron | 35.0% |
| !! | TTTACTTCTGAAGTTGGACT+TGG | - | chr1.2:5995082-5995101 | MS.gene24542:intron | 35.0% |
| AAAAGACCAGAGCAACTGAT+TGG | + | chr1.2:5992702-5992721 | None:intergenic | 40.0% | |
| AAATCTCCTTTCCCAGCTTA+AGG | - | chr1.2:5990967-5990986 | MS.gene24542:CDS | 40.0% | |
| AACCTTACTACACTGATGCA+CGG | - | chr1.2:5994461-5994480 | MS.gene24542:CDS | 40.0% | |
| AACGGTTGAGTTCAATCATC+AGG | + | chr1.2:5995035-5995054 | None:intergenic | 40.0% | |
| AATGTCGTGCAAAGAGATTC+AGG | + | chr1.2:5995563-5995582 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr1.2:5993358-5993377 | MS.gene24542:intron | 40.0% | |
| ACTTAGTTATGCTAGGGAGT+TGG | - | chr1.2:5995731-5995750 | MS.gene24542:CDS | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr1.2:5993489-5993508 | MS.gene24542:intron | 40.0% | |
| AGTTCAATCATCAGGTAGGT+AGG | + | chr1.2:5995027-5995046 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | - | chr1.2:5992754-5992773 | MS.gene24542:intron | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr1.2:5993022-5993041 | None:intergenic | 40.0% | |
| CCCTAGCATAACTAAGTGTT+TGG | + | chr1.2:5995728-5995747 | None:intergenic | 40.0% | |
| CCTATGAGAAAGGCCTTAAA+CGG | - | chr1.2:5991854-5991873 | MS.gene24542:CDS | 40.0% | |
| CCTGAATGGGAAATCAAGAA+CGG | - | chr1.2:5995633-5995652 | MS.gene24542:intron | 40.0% | |
| CGTTCTTGATTTCCCATTCA+GGG | + | chr1.2:5995635-5995654 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr1.2:5993357-5993376 | MS.gene24542:intron | 40.0% | |
| GCTAGAAGCTAAATCCTAAC+TGG | + | chr1.2:5991786-5991805 | None:intergenic | 40.0% | |
| GGATAGATAACCTTTCTGTC+TGG | - | chr1.2:5992521-5992540 | MS.gene24542:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr1.2:5993078-5993097 | MS.gene24542:intron | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr1.2:5993117-5993136 | MS.gene24542:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr1.2:5993325-5993344 | MS.gene24542:intron | 40.0% | |
| GTTAGAGTGTACCTTAAGCT+GGG | + | chr1.2:5990981-5991000 | None:intergenic | 40.0% | |
| GTTGAGTTCAATCATCAGGT+AGG | + | chr1.2:5995031-5995050 | None:intergenic | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | - | chr1.2:5992755-5992774 | MS.gene24542:intron | 40.0% | |
| TAACTGCTTGTCAGGTGAAT+AGG | - | chr1.2:5994293-5994312 | MS.gene24542:intron | 40.0% | |
| TAAGTGTTTGTGAGAAACGG+GGG | - | chr1.2:5991508-5991527 | MS.gene24542:intron | 40.0% | |
| TACAGGTAAGAAAACAACGC+AGG | + | chr1.2:5992257-5992276 | None:intergenic | 40.0% | |
| TACGGGTAAGAAAACAATGC+AGG | + | chr1.2:5992305-5992324 | None:intergenic | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr1.2:5993015-5993034 | MS.gene24542:intron | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr1.2:5993356-5993375 | MS.gene24542:intron | 40.0% | |
| TGAGACTTCTTGTGCAGAAT+AGG | - | chr1.2:5994784-5994803 | MS.gene24542:intron | 40.0% | |
| TGGAGCAATCCTTTATGGAA+GGG | - | chr1.2:5994886-5994905 | MS.gene24542:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | + | chr1.2:5992754-5992773 | None:intergenic | 40.0% | |
| TGGTTTATACTGACCCAGTT+AGG | - | chr1.2:5991769-5991788 | MS.gene24542:CDS | 40.0% | |
| TTCATTCCAATCAGTTGCTC+TGG | - | chr1.2:5992693-5992712 | MS.gene24542:intron | 40.0% | |
| TTGGAGCAATCCTTTATGGA+AGG | - | chr1.2:5994885-5994904 | MS.gene24542:intron | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | + | chr1.2:5992755-5992774 | None:intergenic | 40.0% | |
| TTTGTCATGCAGCAAGACAA+AGG | + | chr1.2:5994095-5994114 | None:intergenic | 40.0% | |
| ! | AACAGGTTGAGACCAAGTAT+TGG | + | chr1.2:5994765-5994784 | None:intergenic | 40.0% |
| ! | ACAGGTTGAGACCAAGTATT+GGG | + | chr1.2:5994764-5994783 | None:intergenic | 40.0% |
| ! | ATCTTTTGGCAAAGACCATC+AGG | - | chr1.2:5994973-5994992 | MS.gene24542:intron | 40.0% |
| ! | CACAGCATTGAAATTAGGGT+AGG | + | chr1.2:5991026-5991045 | None:intergenic | 40.0% |
| ! | GTCGAGAATTTTGTCCAAAC+TGG | - | chr1.2:5991999-5992018 | MS.gene24542:intron | 40.0% |
| ! | GTTAGCTCTTGAACTGCATT+AGG | + | chr1.2:5992165-5992184 | None:intergenic | 40.0% |
| ! | TAGTGGCATTTTTCACTTGC+AGG | - | chr1.2:5992092-5992111 | MS.gene24542:intron | 40.0% |
| ! | TTCGGCCAAATTTTCATTGC+AGG | + | chr1.2:5995206-5995225 | None:intergenic | 40.0% |
| !! | ACTTGCAGGTGTTACTAACA+GGG | - | chr1.2:5992106-5992125 | MS.gene24542:intron | 40.0% |
| !! | AGATTTTAGTGGCAGGTTGT+TGG | - | chr1.2:5991611-5991630 | MS.gene24542:intron | 40.0% |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | + | chr1.2:5992960-5992979 | None:intergenic | 40.0% |
| !! | CACGACATTGTTTTGTTCTC+CGG | - | chr1.2:5995574-5995593 | MS.gene24542:intron | 40.0% |
| !! | CTCTTGATTGGTTGTTTCTG+TGG | - | chr1.2:5991314-5991333 | MS.gene24542:intron | 40.0% |
| !! | GAAGTGTGTGTTTAGTTCTG+CGG | + | chr1.2:5993943-5993962 | None:intergenic | 40.0% |
| !! | GATTTTAGTGGCAGGTTGTT+GGG | - | chr1.2:5991612-5991631 | MS.gene24542:intron | 40.0% |
| !! | TGTTTGGTTGATGAGTTGCA+GGG | + | chr1.2:5995712-5995731 | None:intergenic | 40.0% |
| AACGCCTTATCCCACTAAGT+GGG | + | chr1.2:5993630-5993649 | None:intergenic | 45.0% | |
| AACGGGGGTTTACTCTTGAT+TGG | - | chr1.2:5991523-5991542 | MS.gene24542:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr1.2:5993230-5993249 | MS.gene24542:intron | 45.0% | |
| ACGTTCAGAGATGAGATAGC+AGG | - | chr1.2:5995329-5995348 | MS.gene24542:intron | 45.0% | |
| ACTGTTCTATCTGGTTGTGC+TGG | - | chr1.2:5992645-5992664 | MS.gene24542:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr1.2:5993473-5993492 | MS.gene24542:intron | 45.0% | |
| AGGTTGTTGGGTGGCAATTT+GGG | - | chr1.2:5991624-5991643 | MS.gene24542:intron | 45.0% | |
| AGTGTACCTTAAGCTGGGAA+AGG | + | chr1.2:5990976-5990995 | None:intergenic | 45.0% | |
| ATCACAAAGAGCTCATAGCC+AGG | + | chr1.2:5992423-5992442 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr1.2:5993121-5993140 | MS.gene24542:intron | 45.0% | |
| ATTGCTTTCATCCACTGCTC+TGG | - | chr1.2:5994833-5994852 | MS.gene24542:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr1.2:5993359-5993378 | MS.gene24542:intron | 45.0% | |
| CCACCTTAAACCAGACAGAA+AGG | + | chr1.2:5992534-5992553 | None:intergenic | 45.0% | |
| CCGTTCTTGATTTCCCATTC+AGG | + | chr1.2:5995636-5995655 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr1.2:5993278-5993297 | MS.gene24542:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr1.2:5993275-5993294 | None:intergenic | 45.0% | |
| CTGGGAAAGGAGATTTGAAG+CGG | + | chr1.2:5990963-5990982 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr1.2:5993163-5993182 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr1.2:5993483-5993502 | MS.gene24542:intron | 45.0% | |
| GATCCACTTCCAACTATGAC+AGG | + | chr1.2:5992473-5992492 | None:intergenic | 45.0% | |
| GCAGCTTGAATTCATAGCTC+TGG | - | chr1.2:5991749-5991768 | MS.gene24542:CDS | 45.0% | |
| GGAGCAATCCTTTATGGAAG+GGG | - | chr1.2:5994887-5994906 | MS.gene24542:intron | 45.0% | |
| GGTTAGAGTGTACCTTAAGC+TGG | + | chr1.2:5990982-5991001 | None:intergenic | 45.0% | |
| GTTCTTCAAAGCATGGCAGT+AGG | - | chr1.2:5992500-5992519 | MS.gene24542:intron | 45.0% | |
| GTTGTATGCCCCTTCCATAA+AGG | + | chr1.2:5994898-5994917 | None:intergenic | 45.0% | |
| TACCGTGCATCAGTGTAGTA+AGG | + | chr1.2:5994466-5994485 | None:intergenic | 45.0% | |
| TATCTGCAAACAAGGGTGGA+AGG | + | chr1.2:5992140-5992159 | None:intergenic | 45.0% | |
| TCCAACTATGACAGGAGGTA+TGG | + | chr1.2:5992465-5992484 | None:intergenic | 45.0% | |
| TCCACGGCATGCTTAATACA+AGG | + | chr1.2:5994864-5994883 | None:intergenic | 45.0% | |
| TCCATACCTCCTGTCATAGT+TGG | - | chr1.2:5992461-5992480 | MS.gene24542:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr1.2:5993234-5993253 | None:intergenic | 45.0% | |
| TCCTTGTATTAAGCATGCCG+TGG | - | chr1.2:5994860-5994879 | MS.gene24542:intron | 45.0% | |
| TCTGCACAAGAAGTCTCAAC+AGG | + | chr1.2:5994782-5994801 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr1.2:5993238-5993257 | MS.gene24542:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr1.2:5993130-5993149 | MS.gene24542:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr1.2:5993144-5993163 | MS.gene24542:intron | 45.0% | |
| ! | CCGTTTAAGGCCTTTCTCAT+AGG | + | chr1.2:5991857-5991876 | None:intergenic | 45.0% |
| ! | CCTTTCTGTCTGGTTTAAGG+TGG | - | chr1.2:5992531-5992550 | MS.gene24542:intron | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | - | chr1.2:5992865-5992884 | MS.gene24542:intron | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr1.2:5993239-5993258 | MS.gene24542:intron | 45.0% |
| ! | TTCCAAGAGTTCCTGGTCTT+TGG | + | chr1.2:5995417-5995436 | None:intergenic | 45.0% |
| !! | AGGGAGGGTATTTCTTTGCA+AGG | + | chr1.2:5995693-5995712 | None:intergenic | 45.0% |
| !! | ATTTCAGGAGCACCCTGAAT+GGG | - | chr1.2:5995620-5995639 | MS.gene24542:intron | 45.0% |
| !! | CACTTGCAGGTGTTACTAAC+AGG | - | chr1.2:5992105-5992124 | MS.gene24542:intron | 45.0% |
| !! | GTGTTTGGTTGATGAGTTGC+AGG | + | chr1.2:5995713-5995732 | None:intergenic | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | + | chr1.2:5992837-5992856 | None:intergenic | 45.0% |
| !! | TTTATTAAAAAAAAAAATAC+GGG | + | chr1.2:5992322-5992341 | None:intergenic | 5.0% |
| AAGGACTTAGGGTTGACCCT+TGG | + | chr1.2:5992774-5992793 | None:intergenic | 50.0% | |
| ACAAGGATTCTCCAGAGCAG+TGG | + | chr1.2:5994847-5994866 | None:intergenic | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | + | chr1.2:5993629-5993648 | None:intergenic | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr1.2:5993306-5993325 | MS.gene24542:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | - | chr1.2:5992890-5992909 | MS.gene24542:intron | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | + | chr1.2:5993631-5993650 | None:intergenic | 50.0% | |
| CACCAAAGACCAGGAACTCT+TGG | - | chr1.2:5995412-5995431 | MS.gene24542:intron | 50.0% | |
| CAGGTTGTTGGGTGGCAATT+TGG | - | chr1.2:5991623-5991642 | MS.gene24542:intron | 50.0% | |
| CCACTTCCAACTATGACAGG+AGG | + | chr1.2:5992470-5992489 | None:intergenic | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | - | chr1.2:5992954-5992973 | MS.gene24542:intron | 50.0% | |
| CCTCCTGTCATAGTTGGAAG+TGG | - | chr1.2:5992467-5992486 | MS.gene24542:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1.2:5993625-5993644 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr1.2:5993005-5993024 | MS.gene24542:intron | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | - | chr1.2:5992889-5992908 | MS.gene24542:intron | 50.0% | |
| GATAGCAGGATGCAGTGAGA+AGG | - | chr1.2:5995343-5995362 | MS.gene24542:intron | 50.0% | |
| GGTGTATCTGCAAACAAGGG+TGG | + | chr1.2:5992144-5992163 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr1.2:5993225-5993244 | MS.gene24542:intron | 50.0% | |
| GTTATGCTAGGGAGTTGGAG+AGG | - | chr1.2:5995736-5995755 | MS.gene24542:CDS | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | - | chr1.2:5992905-5992924 | MS.gene24542:intron | 50.0% | |
| TCTGTCGAGCACTCAAGACA+CGG | + | chr1.2:5994920-5994939 | None:intergenic | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr1.2:5993451-5993470 | None:intergenic | 50.0% | |
| TGGGTACTCCTGAGGAGATT+GGG | + | chr1.2:5994745-5994764 | None:intergenic | 50.0% | |
| TTGGGTACTCCTGAGGAGAT+TGG | + | chr1.2:5994746-5994765 | None:intergenic | 50.0% | |
| TTTAGTGGCAGGTTGTTGGG+TGG | - | chr1.2:5991615-5991634 | MS.gene24542:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr1.2:5993286-5993305 | MS.gene24542:intron | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | - | chr1.2:5992928-5992947 | MS.gene24542:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | - | chr1.2:5992876-5992895 | MS.gene24542:intron | 50.0% |
| ! | GTTGCTGTTCACCAAAGACC+AGG | - | chr1.2:5995403-5995422 | MS.gene24542:intron | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | - | chr1.2:5992875-5992894 | MS.gene24542:intron | 50.0% |
| !! | CCAAGTATTGGGTACTCCTG+AGG | + | chr1.2:5994753-5994772 | None:intergenic | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | + | chr1.2:5992957-5992976 | None:intergenic | 50.0% |
| !! | CCTCAGGAGTACCCAATACT+TGG | - | chr1.2:5994750-5994769 | MS.gene24542:intron | 50.0% |
| !! | GATTTCAGGAGCACCCTGAA+TGG | - | chr1.2:5995619-5995638 | MS.gene24542:intron | 50.0% |
| !! | TGGTTGATGAGTTGCAGGGA+GGG | + | chr1.2:5995708-5995727 | None:intergenic | 50.0% |
| !! | TTGGTTGATGAGTTGCAGGG+AGG | + | chr1.2:5995709-5995728 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1.2:5993617-5993636 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1.2:5993616-5993635 | MS.gene24542:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1.2:5993623-5993642 | MS.gene24542:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr1.2:5993298-5993317 | MS.gene24542:intron | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr1.2:5993212-5993231 | MS.gene24542:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr1.2:5993450-5993469 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | + | chr1.2:5992938-5992957 | None:intergenic | 55.0% | |
| GGGTACTCCTGAGGAGATTG+GGG | + | chr1.2:5994744-5994763 | None:intergenic | 55.0% | |
| TCGTCTTCCCCAATCTCCTC+AGG | - | chr1.2:5994734-5994753 | MS.gene24542:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1.2:5993617-5993636 | MS.gene24542:intron | 55.0% | |
| ! | ACAGAGGTGTGCGAGCTTCA+AGG | + | chr1.2:5995247-5995266 | None:intergenic | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr1.2:5993242-5993261 | MS.gene24542:intron | 55.0% |
| ACGGGAGGCTAGAGACTTGG+AGG | - | chr1.2:5992908-5992927 | MS.gene24542:intron | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | - | chr1.2:5992893-5992912 | MS.gene24542:intron | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | - | chr1.2:5992879-5992898 | MS.gene24542:intron | 60.0% |
| GAGAAGACCCGTAGACGCCG+TGG | - | chr1.2:5993440-5993459 | MS.gene24542:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 5990884 | 5995767 | 5990884 | ID=MS.gene24542 |
| chr1.2 | mRNA | 5990884 | 5995767 | 5990884 | ID=MS.gene24542.t1;Parent=MS.gene24542 |
| chr1.2 | exon | 5995663 | 5995767 | 5995663 | ID=MS.gene24542.t1.exon1;Parent=MS.gene24542.t1 |
| chr1.2 | CDS | 5995663 | 5995767 | 5995663 | ID=cds.MS.gene24542.t1;Parent=MS.gene24542.t1 |
| chr1.2 | exon | 5994459 | 5994537 | 5994459 | ID=MS.gene24542.t1.exon2;Parent=MS.gene24542.t1 |
| chr1.2 | CDS | 5994459 | 5994537 | 5994459 | ID=cds.MS.gene24542.t1;Parent=MS.gene24542.t1 |
| chr1.2 | exon | 5992169 | 5992271 | 5992169 | ID=MS.gene24542.t1.exon3;Parent=MS.gene24542.t1 |
| chr1.2 | CDS | 5992169 | 5992271 | 5992169 | ID=cds.MS.gene24542.t1;Parent=MS.gene24542.t1 |
| chr1.2 | exon | 5991657 | 5991920 | 5991657 | ID=MS.gene24542.t1.exon4;Parent=MS.gene24542.t1 |
| chr1.2 | CDS | 5991657 | 5991920 | 5991657 | ID=cds.MS.gene24542.t1;Parent=MS.gene24542.t1 |
| chr1.2 | exon | 5991203 | 5991314 | 5991203 | ID=MS.gene24542.t1.exon5;Parent=MS.gene24542.t1 |
| chr1.2 | CDS | 5991203 | 5991314 | 5991203 | ID=cds.MS.gene24542.t1;Parent=MS.gene24542.t1 |
| chr1.2 | exon | 5990884 | 5991024 | 5990884 | ID=MS.gene24542.t1.exon6;Parent=MS.gene24542.t1 |
| chr1.2 | CDS | 5990884 | 5991024 | 5990884 | ID=cds.MS.gene24542.t1;Parent=MS.gene24542.t1 |
| Gene Sequence |
| Protein sequence |
