Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57218.t1 | XP_003589038.1 | 100 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 8.20E-147 | 529.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57218.t1 | Q9SGW3 | 83.5 | 267 | 44 | 0 | 1 | 267 | 1 | 267 | 1.7e-124 | 446.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57218.t1 | B7FL82 | 100.0 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 5.9e-147 | 529.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051630 | MS.gene57218 | 0.953252 | 4.12E-111 | -1.69E-46 |
| MS.gene056063 | MS.gene57218 | 0.82548 | 4.58E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57218.t1 | MTR_1g016750 | 100.000 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57218.t1 | AT1G64520 | 83.521 | 267 | 44 | 0 | 1 | 267 | 1 | 267 | 4.37e-159 | 442 |
| MS.gene57218.t1 | AT5G42040 | 62.921 | 267 | 65 | 2 | 1 | 267 | 1 | 233 | 6.97e-113 | 324 |
Find 67 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGAAACTTCTGTGAATT+TGG | 0.038934 | 1.4:+5875913 | None:intergenic |
| CCGTTCTTGATTTCCCATTC+AGG | 0.264023 | 1.4:+5871291 | None:intergenic |
| CACTTGCAGGTGTTACTAAC+AGG | 0.267676 | 1.4:-5874699 | MS.gene57218:intron |
| GGAGTTGGAGCAATCCTTTA+TGG | 0.271340 | 1.4:-5872043 | MS.gene57218:CDS |
| TGTGTATTTCATGGATCTTT+TGG | 0.284808 | 1.4:-5871965 | MS.gene57218:CDS |
| TTCCAAGAGTTCCTGGTCTT+TGG | 0.286082 | 1.4:+5871510 | None:intergenic |
| AAATCTCCTTTCCCAGCTTA+AGG | 0.331927 | 1.4:-5875837 | MS.gene57218:intron |
| GTTAGCTCTTGAACTGCATT+AGG | 0.332972 | 1.4:+5874642 | None:intergenic |
| GGAACTCTTGGAATATATTA+AGG | 0.340067 | 1.4:-5871500 | MS.gene57218:CDS |
| TGCTGAATTCCATACTGAAT+TGG | 0.350776 | 1.4:-5872115 | MS.gene57218:CDS |
| TGAGAAACTTCTGTGAATTT+GGG | 0.351752 | 1.4:+5875914 | None:intergenic |
| CCCTAGCATAACTAAGTGTT+TGG | 0.361635 | 1.4:+5871199 | None:intergenic |
| TAATATATTCCAAGAGTTCC+TGG | 0.370117 | 1.4:+5871503 | None:intergenic |
| TGGGTACTCCTGAGGAGATT+GGG | 0.370608 | 1.4:+5872182 | None:intergenic |
| GTGTTTGGTTGATGAGTTGC+AGG | 0.382114 | 1.4:+5871214 | None:intergenic |
| TGAGACTTCTTGTGCAGAAT+AGG | 0.396052 | 1.4:-5872140 | MS.gene57218:CDS |
| CGTTCTTGATTTCCCATTCA+GGG | 0.400779 | 1.4:+5871292 | None:intergenic |
| TGAAACATATGTGTATTTCA+TGG | 0.407221 | 1.4:-5871974 | MS.gene57218:CDS |
| AAAGCAATTCCAATTCAGTA+TGG | 0.408550 | 1.4:+5872106 | None:intergenic |
| TTGGGTACTCCTGAGGAGAT+TGG | 0.426130 | 1.4:+5872181 | None:intergenic |
| CACCAAAGACCAGGAACTCT+TGG | 0.427127 | 1.4:-5871512 | MS.gene57218:CDS |
| TACCGTGCATCAGTGTAGTA+AGG | 0.430307 | 1.4:+5872461 | None:intergenic |
| ATTGCTTTCATCCACTGCTC+TGG | 0.436359 | 1.4:-5872091 | MS.gene57218:CDS |
| GTTGTATGCCCCTTCCATAA+AGG | 0.451259 | 1.4:+5872029 | None:intergenic |
| CCTCAGGAGTACCCAATACT+TGG | 0.457349 | 1.4:-5872174 | MS.gene57218:CDS |
| ACAGGTTGAGACCAAGTATT+GGG | 0.478577 | 1.4:+5872163 | None:intergenic |
| GGTTAGAGTGTACCTTAAGC+TGG | 0.480510 | 1.4:+5875825 | None:intergenic |
| TCTGCACAAGAAGTCTCAAC+AGG | 0.487747 | 1.4:+5872145 | None:intergenic |
| ACTTAGTTATGCTAGGGAGT+TGG | 0.495838 | 1.4:-5871193 | MS.gene57218:CDS |
| TATTAAGCATGCCGTGGAGT+TGG | 0.497949 | 1.4:-5872058 | MS.gene57218:CDS |
| GATTTCAGGAGCACCCTGAA+TGG | 0.499374 | 1.4:-5871305 | MS.gene57218:intron |
| ATTTCAGGAGCACCCTGAAT+GGG | 0.504260 | 1.4:-5871304 | MS.gene57218:intron |
| TCGTCTTCCCCAATCTCCTC+AGG | 0.513848 | 1.4:-5872190 | MS.gene57218:CDS |
| AGGGAGGGTATTTCTTTGCA+AGG | 0.516901 | 1.4:+5871234 | None:intergenic |
| TTGAAAGAAATCTCTTTCAA+AGG | 0.524033 | 1.4:+5872490 | None:intergenic |
| TGGTTGATGAGTTGCAGGGA+GGG | 0.525378 | 1.4:+5871219 | None:intergenic |
| GGAGCAATCCTTTATGGAAG+GGG | 0.535947 | 1.4:-5872037 | MS.gene57218:CDS |
| TTGGAGCAATCCTTTATGGA+AGG | 0.551519 | 1.4:-5872039 | MS.gene57218:CDS |
| ATTAGGTGTATCTGCAAACA+AGG | 0.554484 | 1.4:+5874659 | None:intergenic |
| AACAGGTTGAGACCAAGTAT+TGG | 0.562540 | 1.4:+5872162 | None:intergenic |
| GTTAGAGTGTACCTTAAGCT+GGG | 0.574520 | 1.4:+5875826 | None:intergenic |
| TGGAGCAATCCTTTATGGAA+GGG | 0.575444 | 1.4:-5872038 | MS.gene57218:CDS |
| ACGTTCAGAGATGAGATAGC+AGG | 0.577525 | 1.4:-5871595 | MS.gene57218:intron |
| GATAGCAGGATGCAGTGAGA+AGG | 0.587670 | 1.4:-5871581 | MS.gene57218:CDS |
| CCAAACACTTAGTTATGCTA+GGG | 0.588753 | 1.4:-5871199 | MS.gene57218:CDS |
| TATCTGCAAACAAGGGTGGA+AGG | 0.590332 | 1.4:+5874667 | None:intergenic |
| GGGTACTCCTGAGGAGATTG+GGG | 0.592535 | 1.4:+5872183 | None:intergenic |
| ACCAAACACTTAGTTATGCT+AGG | 0.593116 | 1.4:-5871200 | MS.gene57218:CDS |
| TCCACGGCATGCTTAATACA+AGG | 0.594862 | 1.4:+5872063 | None:intergenic |
| TTGGTTGATGAGTTGCAGGG+AGG | 0.604694 | 1.4:+5871218 | None:intergenic |
| AGTGTACCTTAAGCTGGGAA+AGG | 0.604789 | 1.4:+5875831 | None:intergenic |
| TGTTTGGTTGATGAGTTGCA+GGG | 0.615391 | 1.4:+5871215 | None:intergenic |
| GGTGTATCTGCAAACAAGGG+TGG | 0.618117 | 1.4:+5874663 | None:intergenic |
| ACAAGGATTCTCCAGAGCAG+TGG | 0.619513 | 1.4:+5872080 | None:intergenic |
| AAAGGATTGCTCCAACTCCA+CGG | 0.630188 | 1.4:+5872047 | None:intergenic |
| GTTATGCTAGGGAGTTGGAG+AGG | 0.631284 | 1.4:-5871188 | MS.gene57218:CDS |
| ACTTGCAGGTGTTACTAACA+GGG | 0.633305 | 1.4:-5874698 | MS.gene57218:intron |
| AACCTTACTACACTGATGCA+CGG | 0.640807 | 1.4:-5872463 | MS.gene57218:intron |
| TCTGTCGAGCACTCAAGACA+CGG | 0.643446 | 1.4:+5872007 | None:intergenic |
| TCCTTGTATTAAGCATGCCG+TGG | 0.644930 | 1.4:-5872064 | MS.gene57218:CDS |
| CCAAGTATTGGGTACTCCTG+AGG | 0.648239 | 1.4:+5872174 | None:intergenic |
| GTTGCTGTTCACCAAAGACC+AGG | 0.651601 | 1.4:-5871521 | MS.gene57218:CDS |
| AAATACACATATGTTTCATG+TGG | 0.652663 | 1.4:+5871979 | None:intergenic |
| ACTCTTGGAATATATTAAGG+AGG | 0.657443 | 1.4:-5871497 | MS.gene57218:intron |
| CCTGAATGGGAAATCAAGAA+CGG | 0.657945 | 1.4:-5871291 | MS.gene57218:CDS |
| CTGGGAAAGGAGATTTGAAG+CGG | 0.672348 | 1.4:+5875844 | None:intergenic |
| TTAGGTGTATCTGCAAACAA+GGG | 0.724231 | 1.4:+5874660 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAAAATAAATAGA+TGG | + | chr1.4:5875244-5875263 | None:intergenic | 10.0% |
| !! | ATTTGTATAAAAAAATTAAG+AGG | - | chr1.4:5871432-5871451 | MS.gene57218:intron | 10.0% |
| !! | TATATGTATATTACTAAAAT+AGG | + | chr1.4:5873944-5873963 | None:intergenic | 10.0% |
| !! | TTTGTATAAAAAAATTAAGA+GGG | - | chr1.4:5871433-5871452 | MS.gene57218:intron | 10.0% |
| !!! | AAATTAATTATGTCAATTTT+GGG | - | chr1.4:5871369-5871388 | MS.gene57218:intron | 10.0% |
| !!! | ATAGTTTTTATTTCTAAAAT+TGG | - | chr1.4:5873719-5873738 | MS.gene57218:intron | 10.0% |
| !!! | TAAATTAATTATGTCAATTT+TGG | - | chr1.4:5871368-5871387 | MS.gene57218:intron | 10.0% |
| !!! | TTTATTTTGTATAATTGATA+TGG | + | chr1.4:5874393-5874412 | None:intergenic | 10.0% |
| !! | AATCTTAAATTAAATTAGGT+TGG | - | chr1.4:5874157-5874176 | MS.gene57218:intron | 15.0% |
| !! | AATTATTTCATAATCAATTC+TGG | - | chr1.4:5874089-5874108 | MS.gene57218:intron | 15.0% |
| !! | AGTGAATCTTAAATTAAATT+AGG | - | chr1.4:5874153-5874172 | MS.gene57218:intron | 15.0% |
| !! | ATTACTAATAACACAAAATA+CGG | + | chr1.4:5873876-5873895 | None:intergenic | 15.0% |
| !! | TTGTATAAAAAAATTAAGAG+GGG | - | chr1.4:5871434-5871453 | MS.gene57218:intron | 15.0% |
| !!! | AAGAGTTTTTATACTAAAAT+TGG | - | chr1.4:5874318-5874337 | MS.gene57218:intron | 15.0% |
| !!! | CACTAAAATCTTTTATTTTT+AGG | + | chr1.4:5871897-5871916 | None:intergenic | 15.0% |
| !!! | CTAAAAATAAAAGATTTTAG+TGG | - | chr1.4:5871895-5871914 | MS.gene57218:intron | 15.0% |
| !!! | CTAAAATATGTTTCTTTTAT+AGG | + | chr1.4:5871660-5871679 | None:intergenic | 15.0% |
| !!! | TAACATAATTGATTTATGTT+TGG | + | chr1.4:5874033-5874052 | None:intergenic | 15.0% |
| !!! | TATTGTAAATGACATTTTAA+TGG | - | chr1.4:5873503-5873522 | MS.gene57218:intron | 15.0% |
| !! | AAATTCTCGACAAATAATTA+TGG | + | chr1.4:5872285-5872304 | None:intergenic | 20.0% |
| !! | AGATATACTAATTATAGAAC+CGG | + | chr1.4:5875771-5875790 | None:intergenic | 20.0% |
| !! | ATATGAGTGAATCTTAAATT+AGG | - | chr1.4:5873477-5873496 | MS.gene57218:intron | 20.0% |
| !! | CAAAGAAAAAGTAAAAATAC+AGG | + | chr1.4:5872569-5872588 | None:intergenic | 20.0% |
| !! | TAATAAACTCAGTTATTGTA+GGG | - | chr1.4:5872240-5872259 | MS.gene57218:intron | 20.0% |
| !! | TCATATGATATTTGATAAGA+TGG | + | chr1.4:5873463-5873482 | None:intergenic | 20.0% |
| !! | TGTATAATTGATATGGAAAA+TGG | + | chr1.4:5874386-5874405 | None:intergenic | 20.0% |
| !! | TGTGTTAATTTATGATGTTT+GGG | + | chr1.4:5873989-5874008 | None:intergenic | 20.0% |
| !! | TTAATAAACTCAGTTATTGT+AGG | - | chr1.4:5872239-5872258 | MS.gene57218:intron | 20.0% |
| !! | TTATGGAAAACTAAATGATA+AGG | + | chr1.4:5872268-5872287 | None:intergenic | 20.0% |
| !! | TTGTGTTAATTTATGATGTT+TGG | + | chr1.4:5873990-5874009 | None:intergenic | 20.0% |
| !!! | AAAAGAAACATATTTTAGAG+AGG | - | chr1.4:5871662-5871681 | MS.gene57218:intron | 20.0% |
| !!! | ATTTTTTTTACTTCTGAAGT+TGG | - | chr1.4:5875251-5875270 | MS.gene57218:intron | 20.0% |
| !!! | GATAGATAAATTTTTCTATC+TGG | - | chr1.4:5874222-5874241 | MS.gene57218:intron | 20.0% |
| ! | AAATACACATATGTTTCATG+TGG | + | chr1.4:5875123-5875142 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr1.4:5872721-5872740 | None:intergenic | 25.0% |
| ! | AATTAATATGATCGAGTCAT+GGG | + | chr1.4:5874432-5874451 | None:intergenic | 25.0% |
| ! | ATAACCTAATGACCTAAATA+AGG | - | chr1.4:5871546-5871565 | MS.gene57218:CDS | 25.0% |
| ! | CTACAAGGTAATATACTATA+AGG | + | chr1.4:5874770-5874789 | None:intergenic | 25.0% |
| ! | GATATTCTTGTGAAGTAAAA+TGG | - | chr1.4:5871705-5871724 | MS.gene57218:intron | 25.0% |
| ! | TAATTAATATGATCGAGTCA+TGG | + | chr1.4:5874433-5874452 | None:intergenic | 25.0% |
| ! | TGAAACATATGTGTATTTCA+TGG | - | chr1.4:5875125-5875144 | MS.gene57218:intron | 25.0% |
| ! | TGTTGAGCTATTGTAATTTA+TGG | - | chr1.4:5874863-5874882 | MS.gene57218:intron | 25.0% |
| ! | TTAAAATAGTACCTAATTGC+TGG | - | chr1.4:5872326-5872345 | MS.gene57218:intron | 25.0% |
| ! | TTATAATAATGGTTGTGCTT+CGG | + | chr1.4:5875399-5875418 | None:intergenic | 25.0% |
| ! | TTGAAAGAAATCTCTTTCAA+AGG | + | chr1.4:5874612-5874631 | None:intergenic | 25.0% |
| !! | AATTTTTACACTAAGGACAA+CGG | + | chr1.4:5874576-5874595 | None:intergenic | 25.0% |
| !! | ATTGTGTACTTGTTAACAAA+GGG | + | chr1.4:5874676-5874695 | None:intergenic | 25.0% |
| !! | CTTCTTGTTGAAAATTTTCA+GGG | - | chr1.4:5874534-5874553 | MS.gene57218:intron | 25.0% |
| !! | CTTGATACTTGTTAGTTATT+GGG | - | chr1.4:5872003-5872022 | MS.gene57218:CDS | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr1.4:5872738-5872757 | MS.gene57218:intron | 25.0% |
| !! | TATTGTGTACTTGTTAACAA+AGG | + | chr1.4:5874677-5874696 | None:intergenic | 25.0% |
| !! | TCTTCTTGTTGAAAATTTTC+AGG | - | chr1.4:5874533-5874552 | MS.gene57218:intron | 25.0% |
| !! | TCTTGATACTTGTTAGTTAT+TGG | - | chr1.4:5872002-5872021 | MS.gene57218:CDS | 25.0% |
| !! | TGAATATAATTGCGCATTTT+GGG | - | chr1.4:5871754-5871773 | MS.gene57218:intron | 25.0% |
| !! | TTCTTGTTGAAAATTTTCAG+GGG | - | chr1.4:5874535-5874554 | MS.gene57218:intron | 25.0% |
| !!! | AAATAAAAGATTTTAGTGGC+AGG | - | chr1.4:5871899-5871918 | MS.gene57218:intron | 25.0% |
| !!! | AAATTAAATTAGGTTGGAAG+AGG | - | chr1.4:5874163-5874182 | MS.gene57218:intron | 25.0% |
| !!! | AAGATGGTTTTTCAGAAAAT+GGG | - | chr1.4:5871582-5871601 | MS.gene57218:CDS | 25.0% |
| !!! | TAAGATGGTTTTTCAGAAAA+TGG | - | chr1.4:5871581-5871600 | MS.gene57218:CDS | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr1.4:5872863-5872882 | None:intergenic | 25.0% |
| !!! | TGACAAATACTGTATTTTAG+AGG | - | chr1.4:5874283-5874302 | MS.gene57218:intron | 25.0% |
| !!! | TTAGTATATCTACTGATTTC+AGG | - | chr1.4:5875780-5875799 | MS.gene57218:intron | 25.0% |
| AAAACACCATAGAAACTGAA+TGG | + | chr1.4:5872506-5872525 | None:intergenic | 30.0% | |
| AAACTTTGTCTAACCGTTTA+AGG | + | chr1.4:5872165-5872184 | None:intergenic | 30.0% | |
| AAAGAAACTAGGGTTTAGTA+GGG | + | chr1.4:5871298-5871317 | None:intergenic | 30.0% | |
| AAAGCAATTCCAATTCAGTA+TGG | + | chr1.4:5874996-5875015 | None:intergenic | 30.0% | |
| AACTAGTTAGCAAATTGACA+TGG | + | chr1.4:5875473-5875492 | None:intergenic | 30.0% | |
| ACATAAGTGTTTGTGAGAAA+CGG | - | chr1.4:5871800-5871819 | MS.gene57218:intron | 30.0% | |
| ACTCTTGGAATATATTAAGG+AGG | - | chr1.4:5875602-5875621 | MS.gene57218:intron | 30.0% | |
| AGATAGATAACTGTTCTATC+TGG | - | chr1.4:5873747-5873766 | MS.gene57218:intron | 30.0% | |
| AGCAATAGTTTCCTTTCTAT+TGG | + | chr1.4:5871968-5871987 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr1.4:5873202-5873221 | MS.gene57218:intron | 30.0% | |
| ATTGAACTCAACCGTTAAAT+TGG | - | chr1.4:5875214-5875233 | MS.gene57218:intron | 30.0% | |
| CAAGAAAGCAAATAATGAGT+TGG | + | chr1.4:5874845-5874864 | None:intergenic | 30.0% | |
| CTAATGACCTAAATAAGGAA+CGG | - | chr1.4:5871551-5871570 | MS.gene57218:CDS | 30.0% | |
| GAGCTTCAAGGTTATAATAA+TGG | + | chr1.4:5875410-5875429 | None:intergenic | 30.0% | |
| GATAATACTTTCACGTTTCT+TGG | + | chr1.4:5874799-5874818 | None:intergenic | 30.0% | |
| GCAATAGTTTCCTTTCTATT+GGG | + | chr1.4:5871967-5871986 | None:intergenic | 30.0% | |
| GGAAAAACAATATACAACAG+AGG | + | chr1.4:5875438-5875457 | None:intergenic | 30.0% | |
| GGAACTCTTGGAATATATTA+AGG | - | chr1.4:5875599-5875618 | MS.gene57218:intron | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr1.4:5872681-5872700 | MS.gene57218:intron | 30.0% | |
| GTTTCTTGGTATATACTACA+AGG | + | chr1.4:5874785-5874804 | None:intergenic | 30.0% | |
| TAAGATAATAACTGCTTGTC+AGG | - | chr1.4:5874460-5874479 | MS.gene57218:intron | 30.0% | |
| TAATATATTCCAAGAGTTCC+TGG | + | chr1.4:5875599-5875618 | None:intergenic | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | + | chr1.4:5873294-5873313 | None:intergenic | 30.0% | |
| TAGATGGAGTTCCAATTTAA+CGG | + | chr1.4:5875228-5875247 | None:intergenic | 30.0% | |
| TAGTTCCTGCAATGAAAATT+TGG | - | chr1.4:5875373-5875392 | MS.gene57218:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr1.4:5872674-5872693 | None:intergenic | 30.0% | |
| TGAGAAACTTCTGTGAATTT+GGG | + | chr1.4:5871188-5871207 | None:intergenic | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | + | chr1.4:5873274-5873293 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr1.4:5872677-5872696 | None:intergenic | 30.0% | |
| TGTCCTTAGTGTAAAAATTG+AGG | - | chr1.4:5874577-5874596 | MS.gene57218:intron | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr1.4:5873199-5873218 | None:intergenic | 30.0% | |
| TTCATTCCATTCAGTTTCTA+TGG | - | chr1.4:5872497-5872516 | MS.gene57218:CDS | 30.0% | |
| TTCCTTTCTATTGGGTATTA+GGG | + | chr1.4:5871959-5871978 | None:intergenic | 30.0% | |
| TTGTGAAGTAAAATGGTTGT+GGG | - | chr1.4:5871712-5871731 | MS.gene57218:intron | 30.0% | |
| TTGTTAGTTATTGGGCTTAT+AGG | - | chr1.4:5872011-5872030 | MS.gene57218:CDS | 30.0% | |
| TTGTTGTAAGAAAACAATGC+AGG | + | chr1.4:5872600-5872619 | None:intergenic | 30.0% | |
| TTTAAAGACTATAGCCAGTT+TGG | + | chr1.4:5872311-5872330 | None:intergenic | 30.0% | |
| TTTCCTTTCTATTGGGTATT+AGG | + | chr1.4:5871960-5871979 | None:intergenic | 30.0% | |
| TTTCTCACAAACACTTATGT+GGG | + | chr1.4:5871800-5871819 | None:intergenic | 30.0% | |
| ! | AAAATGGGTTTACTCTTGAT+TGG | - | chr1.4:5871597-5871616 | MS.gene57218:intron | 30.0% |
| ! | AACACACAGCATTGAAATTA+GGG | + | chr1.4:5871325-5871344 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr1.4:5872716-5872735 | MS.gene57218:intron | 30.0% |
| ! | GATCCTCAATTTTTACACTA+AGG | + | chr1.4:5874583-5874602 | None:intergenic | 30.0% |
| ! | GTGAATATAATTGCGCATTT+TGG | - | chr1.4:5871753-5871772 | MS.gene57218:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr1.4:5872867-5872886 | MS.gene57218:intron | 30.0% |
| ! | TGTCTATTTTCAAAAGGCAA+AGG | - | chr1.4:5875834-5875853 | MS.gene57218:intron | 30.0% |
| ! | TGTGTATTTCATGGATCTTT+TGG | - | chr1.4:5875134-5875153 | MS.gene57218:intron | 30.0% |
| ! | TGTTAGAGAAATTAGTTTCG+AGG | + | chr1.4:5875304-5875323 | None:intergenic | 30.0% |
| ! | TTCTCAATGTGACTTTTTAG+TGG | - | chr1.4:5872370-5872389 | MS.gene57218:intron | 30.0% |
| ! | TTGTGTACTTGTTAACAAAG+GGG | + | chr1.4:5874675-5874694 | None:intergenic | 30.0% |
| !! | CATTTTTCCGTTCCTTATTT+AGG | + | chr1.4:5871561-5871580 | None:intergenic | 30.0% |
| !!! | CATGTCTATTGTTTTAGATC+CGG | + | chr1.4:5874727-5874746 | None:intergenic | 30.0% |
| !!! | GACATTTTAATGGATTATCC+TGG | - | chr1.4:5873513-5873532 | MS.gene57218:intron | 30.0% |
| AACCCTAATACCCAATAGAA+AGG | - | chr1.4:5871954-5871973 | MS.gene57218:CDS | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | + | chr1.4:5873266-5873285 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr1.4:5873065-5873084 | MS.gene57218:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr1.4:5872793-5872812 | None:intergenic | 35.0% | |
| AAGGCAATAGTTAAGTGATC+AGG | + | chr1.4:5874751-5874770 | None:intergenic | 35.0% | |
| ACCAAACACTTAGTTATGCT+AGG | - | chr1.4:5875899-5875918 | MS.gene57218:CDS | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | chr1.4:5873265-5873284 | None:intergenic | 35.0% | |
| AGAAAGAATCACCAGCAATT+AGG | + | chr1.4:5872340-5872359 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr1.4:5872926-5872945 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr1.4:5872709-5872728 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr1.4:5872874-5872893 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr1.4:5873061-5873080 | None:intergenic | 35.0% | |
| AGGAACGGAAAAATGTAAGA+TGG | - | chr1.4:5871566-5871585 | MS.gene57218:CDS | 35.0% | |
| AGGAGAATGAACAAAGAGAA+AGG | + | chr1.4:5873838-5873857 | None:intergenic | 35.0% | |
| ATAAGTGTTTGTGAGAAACG+GGG | - | chr1.4:5871802-5871821 | MS.gene57218:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr1.4:5873214-5873233 | None:intergenic | 35.0% | |
| ATCTATCTTTCTTACTGCCA+TGG | + | chr1.4:5874209-5874228 | None:intergenic | 35.0% | |
| ATTAGGGTAGGAAAGAAACT+AGG | + | chr1.4:5871309-5871328 | None:intergenic | 35.0% | |
| ATTAGGTGTATCTGCAAACA+AGG | + | chr1.4:5872443-5872462 | None:intergenic | 35.0% | |
| CATAAGTGTTTGTGAGAAAC+GGG | - | chr1.4:5871801-5871820 | MS.gene57218:intron | 35.0% | |
| CCAAACACTTAGTTATGCTA+GGG | - | chr1.4:5875900-5875919 | MS.gene57218:CDS | 35.0% | |
| CTAGAAGCTAAATCCTAACT+GGG | + | chr1.4:5872080-5872099 | None:intergenic | 35.0% | |
| CTGAGAAACTTCTGTGAATT+TGG | + | chr1.4:5871189-5871208 | None:intergenic | 35.0% | |
| CTTGTGAAGTAAAATGGTTG+TGG | - | chr1.4:5871711-5871730 | MS.gene57218:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr1.4:5872849-5872868 | None:intergenic | 35.0% | |
| GAAAGAAACTAGGGTTTAGT+AGG | + | chr1.4:5871299-5871318 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr1.4:5873201-5873220 | MS.gene57218:intron | 35.0% | |
| GGAGAATGAACAAAGAGAAA+GGG | + | chr1.4:5873837-5873856 | None:intergenic | 35.0% | |
| GGCTTATCAAGTAAAAGCAA+AGG | + | chr1.4:5875717-5875736 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr1.4:5872796-5872815 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr1.4:5873200-5873219 | None:intergenic | 35.0% | |
| GTTTCTCACAAACACTTATG+TGG | + | chr1.4:5871801-5871820 | None:intergenic | 35.0% | |
| TAATCTCAGACTGTTGAATC+CGG | - | chr1.4:5874705-5874724 | MS.gene57218:intron | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | + | chr1.4:5873139-5873158 | None:intergenic | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr1.4:5873203-5873222 | MS.gene57218:intron | 35.0% | |
| TGATTCTTTGCCTATGAGAA+AGG | - | chr1.4:5872139-5872158 | MS.gene57218:CDS | 35.0% | |
| TGCTGAATTCCATACTGAAT+TGG | - | chr1.4:5874984-5875003 | MS.gene57218:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr1.4:5872854-5872873 | None:intergenic | 35.0% | |
| TTAAGAGGGGTTGTTAGAAA+CGG | - | chr1.4:5871447-5871466 | MS.gene57218:intron | 35.0% | |
| TTAGGGTAGGAAAGAAACTA+GGG | + | chr1.4:5871308-5871327 | None:intergenic | 35.0% | |
| TTAGGTGTATCTGCAAACAA+GGG | + | chr1.4:5872442-5872461 | None:intergenic | 35.0% | |
| TTGACATGGATGTGCAAATA+TGG | + | chr1.4:5875459-5875478 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr1.4:5872797-5872816 | MS.gene57218:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr1.4:5873074-5873093 | None:intergenic | 35.0% |
| ! | AACGGTGTTTTACTCTTGAT+TGG | - | chr1.4:5871465-5871484 | MS.gene57218:intron | 35.0% |
| ! | CAACACACAGCATTGAAATT+AGG | + | chr1.4:5871326-5871345 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr1.4:5872697-5872716 | None:intergenic | 35.0% |
| ! | CGGTTCTGTCTATTTTCAAA+AGG | - | chr1.4:5875828-5875847 | MS.gene57218:intron | 35.0% |
| ! | CGTTCCTTATTTAGGTCATT+AGG | + | chr1.4:5871553-5871572 | None:intergenic | 35.0% |
| ! | TAACCTTTCTGTCTGGTTTA+AGG | - | chr1.4:5873639-5873658 | MS.gene57218:intron | 35.0% |
| ! | TGGGTAGTTTGCATCAAAAT+TGG | + | chr1.4:5873970-5873989 | None:intergenic | 35.0% |
| !! | AGGATTTAGCTTCTAGCTTA+TGG | - | chr1.4:5872084-5872103 | MS.gene57218:CDS | 35.0% |
| !! | CATGCTTTGAAGAACAAAAC+AGG | + | chr1.4:5873606-5873625 | None:intergenic | 35.0% |
| !! | CTGTTTTGTTCTTCAAAGCA+TGG | - | chr1.4:5873604-5873623 | MS.gene57218:intron | 35.0% |
| !! | GGATTTAGCTTCTAGCTTAT+GGG | - | chr1.4:5872085-5872104 | MS.gene57218:CDS | 35.0% |
| !! | TACGGATTAGAAAACAATGC+AGG | + | chr1.4:5873858-5873877 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr1.4:5873172-5873191 | MS.gene57218:intron | 35.0% |
| !! | TTGTTTTGTTCCTCAAACCA+TGG | - | chr1.4:5874189-5874208 | MS.gene57218:intron | 35.0% |
| !! | TTTACTTCTGAAGTTGGACT+TGG | - | chr1.4:5875257-5875276 | MS.gene57218:intron | 35.0% |
| AAAAGACCAGAGCAACTGAT+TGG | + | chr1.4:5873813-5873832 | None:intergenic | 40.0% | |
| AAATCTCCTTTCCCAGCTTA+AGG | - | chr1.4:5871262-5871281 | MS.gene57218:CDS | 40.0% | |
| AACCTTACTACACTGATGCA+CGG | - | chr1.4:5874636-5874655 | MS.gene57218:CDS | 40.0% | |
| AACGGTTGAGTTCAATCATC+AGG | + | chr1.4:5875210-5875229 | None:intergenic | 40.0% | |
| AATGTCGTGCAAAGAGATTC+AGG | + | chr1.4:5875738-5875757 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr1.4:5872899-5872918 | None:intergenic | 40.0% | |
| ACTTAGTTATGCTAGGGAGT+TGG | - | chr1.4:5875906-5875925 | MS.gene57218:CDS | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr1.4:5872768-5872787 | None:intergenic | 40.0% | |
| AGTTCAATCATCAGGTAGGT+AGG | + | chr1.4:5875202-5875221 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | chr1.4:5873235-5873254 | MS.gene57218:intron | 40.0% | |
| CCCTAGCATAACTAAGTGTT+TGG | + | chr1.4:5875903-5875922 | None:intergenic | 40.0% | |
| CCTATGAGAAAGGCCTTAAA+CGG | - | chr1.4:5872149-5872168 | MS.gene57218:CDS | 40.0% | |
| CCTGAATGGGAAATCAAGAA+CGG | - | chr1.4:5875808-5875827 | MS.gene57218:intron | 40.0% | |
| CGTTCTTGATTTCCCATTCA+GGG | + | chr1.4:5875810-5875829 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr1.4:5872900-5872919 | None:intergenic | 40.0% | |
| GCTAGAAGCTAAATCCTAAC+TGG | + | chr1.4:5872081-5872100 | None:intergenic | 40.0% | |
| GGATAGATAACCTTTCTGTC+TGG | - | chr1.4:5873632-5873651 | MS.gene57218:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr1.4:5873179-5873198 | None:intergenic | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | + | chr1.4:5873140-5873159 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr1.4:5872932-5872951 | None:intergenic | 40.0% | |
| GTTAGAGTGTACCTTAAGCT+GGG | + | chr1.4:5871276-5871295 | None:intergenic | 40.0% | |
| GTTGAGTTCAATCATCAGGT+AGG | + | chr1.4:5875206-5875225 | None:intergenic | 40.0% | |
| TAACTGCTTGTCAGGTGAAT+AGG | - | chr1.4:5874468-5874487 | MS.gene57218:intron | 40.0% | |
| TAAGTGTTTGTGAGAAACGG+GGG | - | chr1.4:5871803-5871822 | MS.gene57218:intron | 40.0% | |
| TACAGGTAAGAAAACAACGC+AGG | + | chr1.4:5872552-5872571 | None:intergenic | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | + | chr1.4:5873242-5873261 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr1.4:5872901-5872920 | None:intergenic | 40.0% | |
| TGAGACTTCTTGTGCAGAAT+AGG | - | chr1.4:5874959-5874978 | MS.gene57218:intron | 40.0% | |
| TGGAGCAATCCTTTATGGAA+GGG | - | chr1.4:5875061-5875080 | MS.gene57218:intron | 40.0% | |
| TGGTTTATACTGACCCAGTT+AGG | - | chr1.4:5872064-5872083 | MS.gene57218:CDS | 40.0% | |
| TTCATTCCAATCAGTTGCTC+TGG | - | chr1.4:5873804-5873823 | MS.gene57218:intron | 40.0% | |
| TTGGAGCAATCCTTTATGGA+AGG | - | chr1.4:5875060-5875079 | MS.gene57218:intron | 40.0% | |
| TTTCTTACTGCCATGGTTTG+AGG | + | chr1.4:5874202-5874221 | None:intergenic | 40.0% | |
| TTTGTCATGCAGCAAGACAA+AGG | + | chr1.4:5874270-5874289 | None:intergenic | 40.0% | |
| ! | AACAGGTTGAGACCAAGTAT+TGG | + | chr1.4:5874940-5874959 | None:intergenic | 40.0% |
| ! | ACAGGTTGAGACCAAGTATT+GGG | + | chr1.4:5874939-5874958 | None:intergenic | 40.0% |
| ! | ATCTTTTGGCAAAGACCATC+AGG | - | chr1.4:5875148-5875167 | MS.gene57218:intron | 40.0% |
| ! | CACAGCATTGAAATTAGGGT+AGG | + | chr1.4:5871321-5871340 | None:intergenic | 40.0% |
| ! | GTCGAGAATTTTGTCCAAAC+TGG | - | chr1.4:5872294-5872313 | MS.gene57218:intron | 40.0% |
| ! | GTTAGCTCTTGAACTGCATT+AGG | + | chr1.4:5872460-5872479 | None:intergenic | 40.0% |
| ! | TAGTGGCATTTTTCACTTGC+AGG | - | chr1.4:5872387-5872406 | MS.gene57218:intron | 40.0% |
| ! | TTCGGCCAAATTTTCATTGC+AGG | + | chr1.4:5875381-5875400 | None:intergenic | 40.0% |
| !! | ACTTGCAGGTGTTACTAACA+GGG | - | chr1.4:5872401-5872420 | MS.gene57218:intron | 40.0% |
| !! | AGATTTTAGTGGCAGGTTGT+TGG | - | chr1.4:5871906-5871925 | MS.gene57218:intron | 40.0% |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | - | chr1.4:5873297-5873316 | MS.gene57218:intron | 40.0% |
| !! | CACGACATTGTTTTGTTCTC+CGG | - | chr1.4:5875749-5875768 | MS.gene57218:intron | 40.0% |
| !! | CTCTTGATTGGTTGTTTCTG+TGG | - | chr1.4:5871609-5871628 | MS.gene57218:intron | 40.0% |
| !! | GAAGTGTGTGTTTAGTTCTG+CGG | + | chr1.4:5874118-5874137 | None:intergenic | 40.0% |
| !! | GATTTTAGTGGCAGGTTGTT+GGG | - | chr1.4:5871907-5871926 | MS.gene57218:intron | 40.0% |
| !! | TGTTTGGTTGATGAGTTGCA+GGG | + | chr1.4:5875887-5875906 | None:intergenic | 40.0% |
| AAAGGATTGCTCCAACTCCA+CGG | + | chr1.4:5875055-5875074 | None:intergenic | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr1.4:5872627-5872646 | MS.gene57218:intron | 45.0% | |
| AACGGGGGTTTACTCTTGAT+TGG | - | chr1.4:5871818-5871837 | MS.gene57218:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr1.4:5873027-5873046 | None:intergenic | 45.0% | |
| ACGTTCAGAGATGAGATAGC+AGG | - | chr1.4:5875504-5875523 | MS.gene57218:intron | 45.0% | |
| ACTGTTCTATCTGGTTGTGC+TGG | - | chr1.4:5873756-5873775 | MS.gene57218:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr1.4:5872784-5872803 | None:intergenic | 45.0% | |
| AGGTTGTTGGGTGGCAATTT+GGG | - | chr1.4:5871919-5871938 | MS.gene57218:intron | 45.0% | |
| AGTGTACCTTAAGCTGGGAA+AGG | + | chr1.4:5871271-5871290 | None:intergenic | 45.0% | |
| ATCACAAAGAGCTCATAGCC+AGG | + | chr1.4:5873534-5873553 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr1.4:5873136-5873155 | None:intergenic | 45.0% | |
| ATTGCTTTCATCCACTGCTC+TGG | - | chr1.4:5875008-5875027 | MS.gene57218:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr1.4:5872898-5872917 | None:intergenic | 45.0% | |
| CCACCTTAAACCAGACAGAA+AGG | + | chr1.4:5873645-5873664 | None:intergenic | 45.0% | |
| CCGTTCTTGATTTCCCATTC+AGG | + | chr1.4:5875811-5875830 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr1.4:5872979-5872998 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr1.4:5872982-5873001 | MS.gene57218:intron | 45.0% | |
| CTGGGAAAGGAGATTTGAAG+CGG | + | chr1.4:5871258-5871277 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr1.4:5873094-5873113 | MS.gene57218:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr1.4:5872774-5872793 | None:intergenic | 45.0% | |
| GATCCACTTCCAACTATGAC+AGG | + | chr1.4:5873584-5873603 | None:intergenic | 45.0% | |
| GCAGCTTGAATTCATAGCTC+TGG | - | chr1.4:5872044-5872063 | MS.gene57218:CDS | 45.0% | |
| GGAGCAATCCTTTATGGAAG+GGG | - | chr1.4:5875062-5875081 | MS.gene57218:intron | 45.0% | |
| GGAGTTGGAGCAATCCTTTA+TGG | - | chr1.4:5875056-5875075 | MS.gene57218:intron | 45.0% | |
| GGTTAGAGTGTACCTTAAGC+TGG | + | chr1.4:5871277-5871296 | None:intergenic | 45.0% | |
| GTTCTTCAAAGCATGGCAGT+AGG | - | chr1.4:5873611-5873630 | MS.gene57218:intron | 45.0% | |
| GTTGTATGCCCCTTCCATAA+AGG | + | chr1.4:5875073-5875092 | None:intergenic | 45.0% | |
| TACCGTGCATCAGTGTAGTA+AGG | + | chr1.4:5874641-5874660 | None:intergenic | 45.0% | |
| TATCTGCAAACAAGGGTGGA+AGG | + | chr1.4:5872435-5872454 | None:intergenic | 45.0% | |
| TATTAAGCATGCCGTGGAGT+TGG | - | chr1.4:5875041-5875060 | MS.gene57218:intron | 45.0% | |
| TCCAACTATGACAGGAGGTA+TGG | + | chr1.4:5873576-5873595 | None:intergenic | 45.0% | |
| TCCACGGCATGCTTAATACA+AGG | + | chr1.4:5875039-5875058 | None:intergenic | 45.0% | |
| TCCATACCTCCTGTCATAGT+TGG | - | chr1.4:5873572-5873591 | MS.gene57218:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr1.4:5873023-5873042 | MS.gene57218:intron | 45.0% | |
| TCCTTGTATTAAGCATGCCG+TGG | - | chr1.4:5875035-5875054 | MS.gene57218:intron | 45.0% | |
| TCTGCACAAGAAGTCTCAAC+AGG | + | chr1.4:5874957-5874976 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr1.4:5873019-5873038 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr1.4:5873127-5873146 | None:intergenic | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr1.4:5873113-5873132 | None:intergenic | 45.0% | |
| ! | CCGTTTAAGGCCTTTCTCAT+AGG | + | chr1.4:5872152-5872171 | None:intergenic | 45.0% |
| ! | CCTTTCTGTCTGGTTTAAGG+TGG | - | chr1.4:5873642-5873661 | MS.gene57218:intron | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr1.4:5873392-5873411 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr1.4:5873018-5873037 | None:intergenic | 45.0% |
| ! | TTCCAAGAGTTCCTGGTCTT+TGG | + | chr1.4:5875592-5875611 | None:intergenic | 45.0% |
| !! | AGGGAGGGTATTTCTTTGCA+AGG | + | chr1.4:5875868-5875887 | None:intergenic | 45.0% |
| !! | ATTTCAGGAGCACCCTGAAT+GGG | - | chr1.4:5875795-5875814 | MS.gene57218:intron | 45.0% |
| !! | CACTTGCAGGTGTTACTAAC+AGG | - | chr1.4:5872400-5872419 | MS.gene57218:intron | 45.0% |
| !! | GTGTTTGGTTGATGAGTTGC+AGG | + | chr1.4:5875888-5875907 | None:intergenic | 45.0% |
| !!! | CTTTTATTAAAAAAAAAATA+CGG | + | chr1.4:5873435-5873454 | None:intergenic | 5.0% |
| !!! | TTTTATTAAAAAAAAAATAC+GGG | + | chr1.4:5873434-5873453 | None:intergenic | 5.0% |
| ACAAGGATTCTCCAGAGCAG+TGG | + | chr1.4:5875022-5875041 | None:intergenic | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr1.4:5872628-5872647 | MS.gene57218:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr1.4:5872951-5872970 | None:intergenic | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr1.4:5873367-5873386 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr1.4:5872626-5872645 | MS.gene57218:intron | 50.0% | |
| CACCAAAGACCAGGAACTCT+TGG | - | chr1.4:5875587-5875606 | MS.gene57218:intron | 50.0% | |
| CAGGTTGTTGGGTGGCAATT+TGG | - | chr1.4:5871918-5871937 | MS.gene57218:intron | 50.0% | |
| CCACTTCCAACTATGACAGG+AGG | + | chr1.4:5873581-5873600 | None:intergenic | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | + | chr1.4:5873303-5873322 | None:intergenic | 50.0% | |
| CCTCCTGTCATAGTTGGAAG+TGG | - | chr1.4:5873578-5873597 | MS.gene57218:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.4:5872632-5872651 | MS.gene57218:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | chr1.4:5873252-5873271 | None:intergenic | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr1.4:5873368-5873387 | None:intergenic | 50.0% | |
| GATAGCAGGATGCAGTGAGA+AGG | - | chr1.4:5875518-5875537 | MS.gene57218:intron | 50.0% | |
| GGTGTATCTGCAAACAAGGG+TGG | + | chr1.4:5872439-5872458 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr1.4:5873032-5873051 | None:intergenic | 50.0% | |
| GTTATGCTAGGGAGTTGGAG+AGG | - | chr1.4:5875911-5875930 | MS.gene57218:CDS | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | + | chr1.4:5873352-5873371 | None:intergenic | 50.0% | |
| TCTGTCGAGCACTCAAGACA+CGG | + | chr1.4:5875095-5875114 | None:intergenic | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr1.4:5872806-5872825 | MS.gene57218:intron | 50.0% | |
| TGGGTACTCCTGAGGAGATT+GGG | + | chr1.4:5874920-5874939 | None:intergenic | 50.0% | |
| TTGGGTACTCCTGAGGAGAT+TGG | + | chr1.4:5874921-5874940 | None:intergenic | 50.0% | |
| TTTAGTGGCAGGTTGTTGGG+TGG | - | chr1.4:5871910-5871929 | MS.gene57218:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr1.4:5872971-5872990 | None:intergenic | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | + | chr1.4:5873329-5873348 | None:intergenic | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr1.4:5873381-5873400 | None:intergenic | 50.0% |
| ! | GTTGCTGTTCACCAAAGACC+AGG | - | chr1.4:5875578-5875597 | MS.gene57218:intron | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr1.4:5873382-5873401 | None:intergenic | 50.0% |
| !! | CCAAGTATTGGGTACTCCTG+AGG | + | chr1.4:5874928-5874947 | None:intergenic | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr1.4:5873300-5873319 | MS.gene57218:intron | 50.0% |
| !! | CCTCAGGAGTACCCAATACT+TGG | - | chr1.4:5874925-5874944 | MS.gene57218:intron | 50.0% |
| !! | GATTTCAGGAGCACCCTGAA+TGG | - | chr1.4:5875794-5875813 | MS.gene57218:intron | 50.0% |
| !! | TGGTTGATGAGTTGCAGGGA+GGG | + | chr1.4:5875883-5875902 | None:intergenic | 50.0% |
| !! | TTGGTTGATGAGTTGCAGGG+AGG | + | chr1.4:5875884-5875903 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1.4:5872640-5872659 | MS.gene57218:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.4:5872641-5872660 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.4:5872634-5872653 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr1.4:5872959-5872978 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr1.4:5873045-5873064 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr1.4:5872807-5872826 | MS.gene57218:intron | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | - | chr1.4:5873319-5873338 | MS.gene57218:intron | 55.0% | |
| GGGTACTCCTGAGGAGATTG+GGG | + | chr1.4:5874919-5874938 | None:intergenic | 55.0% | |
| TCGTCTTCCCCAATCTCCTC+AGG | - | chr1.4:5874909-5874928 | MS.gene57218:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1.4:5872640-5872659 | None:intergenic | 55.0% | |
| ! | ACAGAGGTGTGCGAGCTTCA+AGG | + | chr1.4:5875422-5875441 | None:intergenic | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr1.4:5873015-5873034 | None:intergenic | 55.0% |
| ACGGGAGGCTAGAGACTTGG+AGG | + | chr1.4:5873349-5873368 | None:intergenic | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | + | chr1.4:5873364-5873383 | None:intergenic | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr1.4:5873378-5873397 | None:intergenic | 60.0% |
| GAGAAGACCCGTAGACGCCG+TGG | + | chr1.4:5872817-5872836 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 5871179 | 5875942 | 5871179 | ID=MS.gene57218 |
| chr1.4 | mRNA | 5871179 | 5875942 | 5871179 | ID=MS.gene57218.t1;Parent=MS.gene57218 |
| chr1.4 | exon | 5875838 | 5875942 | 5875838 | ID=MS.gene57218.t1.exon1;Parent=MS.gene57218.t1 |
| chr1.4 | CDS | 5875838 | 5875942 | 5875838 | ID=cds.MS.gene57218.t1;Parent=MS.gene57218.t1 |
| chr1.4 | exon | 5874634 | 5874712 | 5874634 | ID=MS.gene57218.t1.exon2;Parent=MS.gene57218.t1 |
| chr1.4 | CDS | 5874634 | 5874712 | 5874634 | ID=cds.MS.gene57218.t1;Parent=MS.gene57218.t1 |
| chr1.4 | exon | 5872464 | 5872566 | 5872464 | ID=MS.gene57218.t1.exon3;Parent=MS.gene57218.t1 |
| chr1.4 | CDS | 5872464 | 5872566 | 5872464 | ID=cds.MS.gene57218.t1;Parent=MS.gene57218.t1 |
| chr1.4 | exon | 5871952 | 5872215 | 5871952 | ID=MS.gene57218.t1.exon4;Parent=MS.gene57218.t1 |
| chr1.4 | CDS | 5871952 | 5872215 | 5871952 | ID=cds.MS.gene57218.t1;Parent=MS.gene57218.t1 |
| chr1.4 | exon | 5871498 | 5871609 | 5871498 | ID=MS.gene57218.t1.exon5;Parent=MS.gene57218.t1 |
| chr1.4 | CDS | 5871498 | 5871609 | 5871498 | ID=cds.MS.gene57218.t1;Parent=MS.gene57218.t1 |
| chr1.4 | exon | 5871179 | 5871319 | 5871179 | ID=MS.gene57218.t1.exon6;Parent=MS.gene57218.t1 |
| chr1.4 | CDS | 5871179 | 5871319 | 5871179 | ID=cds.MS.gene57218.t1;Parent=MS.gene57218.t1 |
| Gene Sequence |
| Protein sequence |
