Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75055.t1 | XP_003620871.1 | 98.3 | 238 | 4 | 0 | 1 | 238 | 1 | 238 | 1.50E-131 | 478.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75055.t1 | Q9C5D7 | 62.8 | 223 | 83 | 0 | 15 | 237 | 9 | 231 | 1.7e-80 | 300.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75055.t1 | G7KJ71 | 98.3 | 238 | 4 | 0 | 1 | 238 | 1 | 238 | 1.1e-131 | 478.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene047856 | MS.gene75055 | PPI |
MS.gene35069 | MS.gene75055 | PPI |
MS.gene059423 | MS.gene75055 | PPI |
MS.gene28756 | MS.gene75055 | PPI |
MS.gene75055 | MS.gene053539 | PPI |
MS.gene028389 | MS.gene75055 | PPI |
MS.gene053535 | MS.gene75055 | PPI |
MS.gene26463 | MS.gene75055 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75055.t1 | MTR_6g091680 | 98.319 | 238 | 4 | 0 | 1 | 238 | 1 | 238 | 8.70e-173 | 475 |
MS.gene75055.t1 | MTR_8g021225 | 70.404 | 223 | 65 | 1 | 15 | 236 | 11 | 233 | 7.57e-114 | 326 |
MS.gene75055.t1 | MTR_8g101900 | 71.429 | 231 | 66 | 0 | 8 | 238 | 5 | 235 | 2.33e-109 | 314 |
MS.gene75055.t1 | MTR_4g085590 | 55.804 | 224 | 98 | 1 | 15 | 237 | 23 | 246 | 5.66e-91 | 268 |
MS.gene75055.t1 | MTR_4g094815 | 57.080 | 226 | 94 | 2 | 15 | 238 | 24 | 248 | 2.53e-90 | 266 |
MS.gene75055.t1 | MTR_4g094925 | 55.556 | 225 | 97 | 2 | 15 | 237 | 19 | 242 | 4.62e-87 | 258 |
MS.gene75055.t1 | MTR_4g094898 | 57.080 | 226 | 94 | 2 | 14 | 237 | 23 | 247 | 4.84e-82 | 246 |
MS.gene75055.t1 | MTR_4g094812 | 57.333 | 225 | 93 | 2 | 15 | 237 | 22 | 245 | 2.49e-81 | 244 |
MS.gene75055.t1 | MTR_4g094925 | 55.851 | 188 | 80 | 2 | 52 | 237 | 25 | 211 | 2.26e-73 | 222 |
MS.gene75055.t1 | MTR_4g094368 | 49.784 | 231 | 106 | 5 | 8 | 235 | 4 | 227 | 2.09e-72 | 220 |
MS.gene75055.t1 | MTR_4g094898 | 58.242 | 182 | 73 | 2 | 58 | 237 | 6 | 186 | 5.32e-66 | 202 |
MS.gene75055.t1 | MTR_2g070410 | 37.500 | 216 | 126 | 3 | 21 | 236 | 91 | 297 | 4.81e-47 | 158 |
MS.gene75055.t1 | MTR_2g070410 | 38.953 | 172 | 101 | 2 | 21 | 192 | 91 | 258 | 9.67e-36 | 128 |
MS.gene75055.t1 | MTR_6g091635 | 100.000 | 34 | 0 | 0 | 198 | 231 | 1 | 34 | 1.90e-17 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75055.t1 | AT4G26220 | 62.780 | 223 | 83 | 0 | 15 | 237 | 9 | 231 | 9.96e-104 | 300 |
MS.gene75055.t1 | AT4G34050 | 55.310 | 226 | 98 | 2 | 15 | 238 | 35 | 259 | 3.48e-92 | 272 |
MS.gene75055.t1 | AT4G34050 | 55.310 | 226 | 98 | 2 | 15 | 238 | 62 | 286 | 5.46e-92 | 272 |
MS.gene75055.t1 | AT1G67980 | 54.425 | 226 | 96 | 3 | 15 | 237 | 10 | 231 | 2.60e-84 | 251 |
MS.gene75055.t1 | AT1G24735 | 52.863 | 227 | 100 | 4 | 15 | 237 | 16 | 239 | 3.14e-79 | 238 |
MS.gene75055.t1 | AT1G67990 | 50.442 | 226 | 106 | 3 | 15 | 237 | 10 | 232 | 1.06e-74 | 226 |
MS.gene75055.t1 | AT1G24735 | 44.043 | 277 | 99 | 4 | 15 | 237 | 16 | 290 | 7.11e-73 | 224 |
MS.gene75055.t1 | AT1G24735 | 55.866 | 179 | 76 | 2 | 60 | 237 | 18 | 194 | 4.40e-69 | 211 |
MS.gene75055.t1 | AT1G67980 | 52.663 | 169 | 69 | 4 | 73 | 237 | 2 | 163 | 1.03e-52 | 168 |
MS.gene75055.t1 | AT3G62000 | 37.447 | 235 | 135 | 5 | 4 | 236 | 53 | 277 | 2.95e-48 | 160 |
MS.gene75055.t1 | AT3G61990 | 37.179 | 234 | 134 | 6 | 4 | 236 | 68 | 289 | 8.20e-46 | 154 |
MS.gene75055.t1 | AT3G62000 | 36.889 | 225 | 130 | 5 | 4 | 226 | 53 | 267 | 2.79e-41 | 144 |
MS.gene75055.t1 | AT4G34050 | 51.200 | 125 | 58 | 2 | 116 | 238 | 25 | 148 | 6.56e-40 | 135 |
Find 39 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCTCCAGCTCTACCAATTT+TGG | 0.186253 | 6.3:-83710411 | MS.gene75055:CDS |
GACAGGAAAACTTATGAAAT+TGG | 0.203207 | 6.3:-83710485 | MS.gene75055:CDS |
TCTAGCAGTTTATCCAAAAT+TGG | 0.261995 | 6.3:+83710398 | None:intergenic |
TCAAATGTTCCTTCATTTGT+AGG | 0.273170 | 6.3:+83709607 | None:intergenic |
TGCATTGGAACTTTCTCTTC+AGG | 0.294646 | 6.3:+83709460 | None:intergenic |
TCAATTGCTGCTATTCTTTG+TGG | 0.314753 | 6.3:+83709430 | None:intergenic |
AATGGTATTGCAGTATATAT+TGG | 0.318254 | 6.3:-83711204 | MS.gene75055:intron |
TTGAGAGGCTCAGGCTCTCT+AGG | 0.392368 | 6.3:+83711167 | None:intergenic |
CTCAGCTCTTTGAGAGGCTC+AGG | 0.393899 | 6.3:+83711158 | None:intergenic |
CCATGAAAGACTGATAAAAC+TGG | 0.437778 | 6.3:-83709542 | MS.gene75055:CDS |
GAATTTGCTCTCACTTCTGT+TGG | 0.447217 | 6.3:-83709373 | MS.gene75055:CDS |
TTATCCAAAATTGGTAGAGC+TGG | 0.462919 | 6.3:+83710407 | None:intergenic |
GCTCTCACTTCTGTTGGTGA+TGG | 0.468535 | 6.3:-83709367 | MS.gene75055:CDS |
ATGCAAACCTTTCCATCGTC+GGG | 0.470357 | 6.3:+83710609 | None:intergenic |
CTACCTGTCATAAGAAAGGC+TGG | 0.478364 | 6.3:-83710461 | MS.gene75055:CDS |
CTGATAAAACTGGTCAAAGT+TGG | 0.482685 | 6.3:-83709532 | MS.gene75055:CDS |
CTTTGTGGTCTAGAATGCAT+TGG | 0.490543 | 6.3:+83709445 | None:intergenic |
ATAGCAACTTTACCTGAGGC+TGG | 0.500969 | 6.3:-83710732 | MS.gene75055:CDS |
ATGATGCAGCCTACAAATGA+AGG | 0.509526 | 6.3:-83709616 | MS.gene75055:intron |
ACTCCAGCCTTTCTTATGAC+AGG | 0.521115 | 6.3:+83710458 | None:intergenic |
TCCTCACTCTGCAATATGAC+AGG | 0.523248 | 6.3:+83711322 | None:intergenic |
ATAAAACTGGTCAAAGTTGG+TGG | 0.527329 | 6.3:-83709529 | MS.gene75055:CDS |
TGGACTACCTGTCATAAGAA+AGG | 0.529586 | 6.3:-83710465 | MS.gene75055:CDS |
CGGGAATGTTGAGTGCAGTA+AGG | 0.537602 | 6.3:+83710628 | None:intergenic |
GTGATTAGTTGACCAGCCTC+AGG | 0.545407 | 6.3:+83710720 | None:intergenic |
GCATTCCTCAGCTCTTTGAG+AGG | 0.548288 | 6.3:+83711152 | None:intergenic |
TTACAGCCATAGATATTGAC+AGG | 0.548694 | 6.3:-83710502 | MS.gene75055:CDS |
TATGGGGTGGACGTGTTGCA+TGG | 0.558956 | 6.3:-83709483 | MS.gene75055:CDS |
TATGCAAACCTTTCCATCGT+CGG | 0.561122 | 6.3:+83710608 | None:intergenic |
TGAGAGGCTCAGGCTCTCTA+GGG | 0.570036 | 6.3:+83711168 | None:intergenic |
CAACATTCCCGACGATGGAA+AGG | 0.570116 | 6.3:-83710616 | MS.gene75055:intron |
TGTCATAAGAAAGGCTGGAG+TGG | 0.586841 | 6.3:-83710456 | MS.gene75055:CDS |
TCCTGTCATATTGCAGAGTG+AGG | 0.598598 | 6.3:-83711323 | MS.gene75055:CDS |
ATGCCACTGAGAATCATCCT+TGG | 0.600903 | 6.3:-83711133 | MS.gene75055:intron |
GCACTCAACATTCCCGACGA+TGG | 0.616697 | 6.3:-83710621 | MS.gene75055:CDS |
TTTCATAGCAACTTTACCTG+AGG | 0.618675 | 6.3:-83710736 | MS.gene75055:CDS |
CTGAGCCTCTCAAAGAGCTG+AGG | 0.634468 | 6.3:-83711157 | MS.gene75055:CDS |
GCAGAGTGAGGACTTAACAA+AGG | 0.657033 | 6.3:-83711311 | MS.gene75055:intron |
TTACCAAGGATGATTCTCAG+TGG | 0.746004 | 6.3:+83711130 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATATGACAACATTTTAT+GGG | - | chr6.3:83711197-83711216 | MS.gene75055:intron | 15.0% |
!!! | TTATATATGACAACATTTTA+TGG | - | chr6.3:83711196-83711215 | MS.gene75055:intron | 15.0% |
!!! | TTTAATTTCGTAAACTAAAT+TGG | - | chr6.3:83711015-83711034 | MS.gene75055:intron | 15.0% |
!! | ACAATATCGAATTATATCTA+CGG | + | chr6.3:83710124-83710143 | None:intergenic | 20.0% |
!! | CATAGTAAGAAGAAATAAAA+GGG | + | chr6.3:83709443-83709462 | None:intergenic | 20.0% |
!! | CTTAAAATGGAAATAGATTT+AGG | + | chr6.3:83710536-83710555 | None:intergenic | 20.0% |
!! | CTTCAAGATTATGATTTAAT+TGG | - | chr6.3:83709645-83709664 | MS.gene75055:intron | 20.0% |
!!! | AATGATTTTTAATGTTACGT+AGG | + | chr6.3:83710986-83711005 | None:intergenic | 20.0% |
!!! | AATTTTTTCATACATGTCAT+AGG | + | chr6.3:83710425-83710444 | None:intergenic | 20.0% |
!!! | ATATATGACAACATTTTATG+GGG | - | chr6.3:83711198-83711217 | MS.gene75055:intron | 20.0% |
!!! | ATTTTTTGACAATTTTTGTG+TGG | - | chr6.3:83711052-83711071 | MS.gene75055:intron | 20.0% |
!!! | TATGTTATCAACAACTTTTA+GGG | + | chr6.3:83710593-83710612 | None:intergenic | 20.0% |
!!! | TTCTCTTTTTATTATCTGTT+TGG | - | chr6.3:83710339-83710358 | MS.gene75055:intron | 20.0% |
! | AAAACGTTAGTATATTGTGA+TGG | - | chr6.3:83709909-83709928 | MS.gene75055:intron | 25.0% |
! | AATGGTATTGCAGTATATAT+TGG | - | chr6.3:83709493-83709512 | MS.gene75055:CDS | 25.0% |
! | AGAAGATAGAATAATTACCA+AGG | + | chr6.3:83709584-83709603 | None:intergenic | 25.0% |
! | CTAGAAATGTGAACTTAAAA+TGG | + | chr6.3:83710549-83710568 | None:intergenic | 25.0% |
! | GCATAGTAAGAAGAAATAAA+AGG | + | chr6.3:83709444-83709463 | None:intergenic | 25.0% |
!! | GTATGTTATCAACAACTTTT+AGG | + | chr6.3:83710594-83710613 | None:intergenic | 25.0% |
!!! | ATACATTTCTAGTAGATCTT+CGG | - | chr6.3:83710610-83710629 | MS.gene75055:intron | 25.0% |
!!! | CGTTTTAAAATTGAACAGAT+CGG | + | chr6.3:83709895-83709914 | None:intergenic | 25.0% |
!!! | TTGGTTTTCATATTCATTCA+GGG | - | chr6.3:83709937-83709956 | MS.gene75055:intron | 25.0% |
GACAGGAAAACTTATGAAAT+TGG | - | chr6.3:83710212-83710231 | MS.gene75055:intron | 30.0% | |
GTATATTGTGATGGTTAACT+TGG | - | chr6.3:83709918-83709937 | MS.gene75055:intron | 30.0% | |
TCAAATGTTCCTTCATTTGT+AGG | + | chr6.3:83711093-83711112 | None:intergenic | 30.0% | |
TCTAGCAGTTTATCCAAAAT+TGG | + | chr6.3:83710302-83710321 | None:intergenic | 30.0% | |
TTCGGTTAAGGTAATTAGTT+AGG | - | chr6.3:83710628-83710647 | MS.gene75055:CDS | 30.0% | |
! | AATGTTACGTAGGTTGAAAT+TGG | + | chr6.3:83710976-83710995 | None:intergenic | 30.0% |
! | ACAGGATTTTTGTAGATTGA+TGG | + | chr6.3:83709360-83709379 | None:intergenic | 30.0% |
! | AGTTTTCCTGTCAATATCTA+TGG | + | chr6.3:83710204-83710223 | None:intergenic | 30.0% |
! | TGGTTTTCATATTCATTCAG+GGG | - | chr6.3:83709938-83709957 | MS.gene75055:intron | 30.0% |
!! | CTTGGTTTTCATATTCATTC+AGG | - | chr6.3:83709936-83709955 | MS.gene75055:intron | 30.0% |
!! | TTCTGCAATGCTTTGAAATT+CGG | - | chr6.3:83709600-83709619 | MS.gene75055:CDS | 30.0% |
AAATAGAACGTTCAAGTGAG+CGG | - | chr6.3:83710797-83710816 | MS.gene75055:intron | 35.0% | |
AAATAGATTTAGGCCCTGTT+TGG | + | chr6.3:83710526-83710545 | None:intergenic | 35.0% | |
ACACAAGATTTATCGAGGTT+CGG | + | chr6.3:83710930-83710949 | None:intergenic | 35.0% | |
ATAAAACTGGTCAAAGTTGG+TGG | - | chr6.3:83711168-83711187 | MS.gene75055:CDS | 35.0% | |
ATCATGATGTTTGTCCAAAC+AGG | - | chr6.3:83710509-83710528 | MS.gene75055:intron | 35.0% | |
CAAAAAGACAATTGAAGTGG+GGG | - | chr6.3:83710024-83710043 | MS.gene75055:intron | 35.0% | |
CCAAAAAGACAATTGAAGTG+GGG | - | chr6.3:83710023-83710042 | MS.gene75055:intron | 35.0% | |
CCATGAAAGACTGATAAAAC+TGG | - | chr6.3:83711155-83711174 | MS.gene75055:CDS | 35.0% | |
CCCAAAAAGACAATTGAAGT+GGG | - | chr6.3:83710022-83710041 | MS.gene75055:intron | 35.0% | |
CGATTCAACCATAGTTTAAC+AGG | - | chr6.3:83709776-83709795 | MS.gene75055:intron | 35.0% | |
CTCACATAAGTGTTTATGCT+AGG | + | chr6.3:83710387-83710406 | None:intergenic | 35.0% | |
CTGATAAAACTGGTCAAAGT+TGG | - | chr6.3:83711165-83711184 | MS.gene75055:CDS | 35.0% | |
GTTAAACTATGGTTGAATCG+TGG | + | chr6.3:83709776-83709795 | None:intergenic | 35.0% | |
TATCTGTCATCCAGTTTAAC+CGG | + | chr6.3:83709686-83709705 | None:intergenic | 35.0% | |
TCAATTGCTGCTATTCTTTG+TGG | + | chr6.3:83711270-83711289 | None:intergenic | 35.0% | |
TCATGATGTTTGTCCAAACA+GGG | - | chr6.3:83710510-83710529 | MS.gene75055:intron | 35.0% | |
TCCCAAAAAGACAATTGAAG+TGG | - | chr6.3:83710021-83710040 | MS.gene75055:intron | 35.0% | |
TGATGACTCTTGATGAACAA+TGG | - | chr6.3:83709475-83709494 | MS.gene75055:CDS | 35.0% | |
TGTACACACAAGATTTATCG+AGG | + | chr6.3:83710935-83710954 | None:intergenic | 35.0% | |
TTACAGCCATAGATATTGAC+AGG | - | chr6.3:83710195-83710214 | MS.gene75055:intron | 35.0% | |
TTATCCAAAATTGGTAGAGC+TGG | + | chr6.3:83710293-83710312 | None:intergenic | 35.0% | |
TTCTAGTAGATCTTCGGTTA+AGG | - | chr6.3:83710616-83710635 | MS.gene75055:intron | 35.0% | |
TTTCATAGCAACTTTACCTG+AGG | - | chr6.3:83709961-83709980 | MS.gene75055:intron | 35.0% | |
! | CCCACTTCAATTGTCTTTTT+GGG | + | chr6.3:83710025-83710044 | None:intergenic | 35.0% |
! | TATGACAACATTTTATGGGG+TGG | - | chr6.3:83711201-83711220 | MS.gene75055:intron | 35.0% |
! | TCTCATTCTCTCGTTTTACA+AGG | + | chr6.3:83710746-83710765 | None:intergenic | 35.0% |
!! | CCAGTTTTATCAGTCTTTCA+TGG | + | chr6.3:83711158-83711177 | None:intergenic | 35.0% |
AATAGAACGTTCAAGTGAGC+GGG | - | chr6.3:83710798-83710817 | MS.gene75055:intron | 40.0% | |
AGAAACTACCTCTAGTATCG+AGG | + | chr6.3:83710147-83710166 | None:intergenic | 40.0% | |
AGGTTCAACCCGATTCAATA+CGG | - | chr6.3:83709796-83709815 | MS.gene75055:intron | 40.0% | |
ATGATGCAGCCTACAAATGA+AGG | - | chr6.3:83711081-83711100 | MS.gene75055:intron | 40.0% | |
CTGGTTGAACCGTATTGAAT+CGG | + | chr6.3:83709808-83709827 | None:intergenic | 40.0% | |
GATATTGTCCTCGATACTAG+AGG | - | chr6.3:83710136-83710155 | MS.gene75055:intron | 40.0% | |
GGGTTGAACCTGTTAAACTA+TGG | + | chr6.3:83709787-83709806 | None:intergenic | 40.0% | |
TATGCAAACCTTTCCATCGT+CGG | + | chr6.3:83710092-83710111 | None:intergenic | 40.0% | |
TGCATTGGAACTTTCTCTTC+AGG | + | chr6.3:83711240-83711259 | None:intergenic | 40.0% | |
TGGACTACCTGTCATAAGAA+AGG | - | chr6.3:83710232-83710251 | MS.gene75055:intron | 40.0% | |
TGGTTGAACCGTATTGAATC+GGG | + | chr6.3:83709807-83709826 | None:intergenic | 40.0% | |
TTACCAAGGATGATTCTCAG+TGG | + | chr6.3:83709570-83709589 | None:intergenic | 40.0% | |
TTCTCTGTTGTATTGCAGTC+TGG | + | chr6.3:83709827-83709846 | None:intergenic | 40.0% | |
TTGGTTCAATCAGTTCACTC+CGG | - | chr6.3:83709664-83709683 | MS.gene75055:intron | 40.0% | |
! | CCCCACTTCAATTGTCTTTT+TGG | + | chr6.3:83710026-83710045 | None:intergenic | 40.0% |
! | CTTTGTGGTCTAGAATGCAT+TGG | + | chr6.3:83711255-83711274 | None:intergenic | 40.0% |
! | GAATTTGCTCTCACTTCTGT+TGG | - | chr6.3:83711324-83711343 | MS.gene75055:CDS | 40.0% |
!! | AGCGTTTTGGACAAGTTAGT+CGG | - | chr6.3:83710658-83710677 | MS.gene75055:CDS | 40.0% |
!! | CATTTCTAGTAGCGAATCAC+TGG | - | chr6.3:83710560-83710579 | MS.gene75055:intron | 40.0% |
ACTCCAGCCTTTCTTATGAC+AGG | + | chr6.3:83710242-83710261 | None:intergenic | 45.0% | |
ACTTGTCCAAAACGCTGAAC+AGG | + | chr6.3:83710654-83710673 | None:intergenic | 45.0% | |
ATAGCAACTTTACCTGAGGC+TGG | - | chr6.3:83709965-83709984 | MS.gene75055:intron | 45.0% | |
ATGCAAACCTTTCCATCGTC+GGG | + | chr6.3:83710091-83710110 | None:intergenic | 45.0% | |
ATGCCACTGAGAATCATCCT+TGG | - | chr6.3:83709564-83709583 | MS.gene75055:CDS | 45.0% | |
CTACCTGTCATAAGAAAGGC+TGG | - | chr6.3:83710236-83710255 | MS.gene75055:intron | 45.0% | |
GAACAAACCAACTGACGAGT+TGG | - | chr6.3:83709844-83709863 | MS.gene75055:intron | 45.0% | |
GCAGAGTGAGGACTTAACAA+AGG | - | chr6.3:83709386-83709405 | MS.gene75055:CDS | 45.0% | |
TCAGTTCACTCCGGTTAAAC+TGG | - | chr6.3:83709673-83709692 | MS.gene75055:intron | 45.0% | |
TCCTCACTCTGCAATATGAC+AGG | + | chr6.3:83709378-83709397 | None:intergenic | 45.0% | |
TCCTGTCATATTGCAGAGTG+AGG | - | chr6.3:83709374-83709393 | MS.gene75055:CDS | 45.0% | |
TGTCATAAGAAAGGCTGGAG+TGG | - | chr6.3:83710241-83710260 | MS.gene75055:intron | 45.0% | |
! | GGACAAGTTAGTCGGTGTTT+CGG | - | chr6.3:83710666-83710685 | MS.gene75055:CDS | 45.0% |
! | GTCTCCAGCTCTACCAATTT+TGG | - | chr6.3:83710286-83710305 | MS.gene75055:intron | 45.0% |
!! | AAACCAACTGACGAGTTGGT+CGG | - | chr6.3:83709848-83709867 | MS.gene75055:intron | 45.0% |
!! | ATTGAAGTGGGGGTGTTTAC+TGG | - | chr6.3:83710034-83710053 | MS.gene75055:intron | 45.0% |
ATCAACCTCGACGAGGATGT+AGG | - | chr6.3:83710891-83710910 | MS.gene75055:intron | 50.0% | |
CAACATTCCCGACGATGGAA+AGG | - | chr6.3:83710081-83710100 | MS.gene75055:intron | 50.0% | |
CGGGAATGTTGAGTGCAGTA+AGG | + | chr6.3:83710072-83710091 | None:intergenic | 50.0% | |
GCATTCCTCAGCTCTTTGAG+AGG | + | chr6.3:83709548-83709567 | None:intergenic | 50.0% | |
TGAATCCTACATCCTCGTCG+AGG | + | chr6.3:83710899-83710918 | None:intergenic | 50.0% | |
! | GCTCTCACTTCTGTTGGTGA+TGG | - | chr6.3:83711330-83711349 | MS.gene75055:CDS | 50.0% |
! | GTGATTAGTTGACCAGCCTC+AGG | + | chr6.3:83709980-83709999 | None:intergenic | 50.0% |
! | GTTAGGCCTGTTCAGCGTTT+TGG | - | chr6.3:83710645-83710664 | MS.gene75055:CDS | 50.0% |
! | TGGTCGGTTCTCTGTTCAAC+TGG | - | chr6.3:83709864-83709883 | MS.gene75055:intron | 50.0% |
CTGAGCCTCTCAAAGAGCTG+AGG | - | chr6.3:83709540-83709559 | MS.gene75055:CDS | 55.0% | |
GAACCGACCAACTCGTCAGT+TGG | + | chr6.3:83709854-83709873 | None:intergenic | 55.0% | |
GCACTCAACATTCCCGACGA+TGG | - | chr6.3:83710076-83710095 | MS.gene75055:intron | 55.0% | |
TATGGGGTGGACGTGTTGCA+TGG | - | chr6.3:83711214-83711233 | MS.gene75055:intron | 55.0% | |
TGAGAGGCTCAGGCTCTCTA+GGG | + | chr6.3:83709532-83709551 | None:intergenic | 55.0% | |
TGCTGAGATCAACCTCGACG+AGG | - | chr6.3:83710884-83710903 | MS.gene75055:intron | 55.0% | |
TTGAGAGGCTCAGGCTCTCT+AGG | + | chr6.3:83709533-83709552 | None:intergenic | 55.0% | |
! | CTCAGCTCTTTGAGAGGCTC+AGG | + | chr6.3:83709542-83709561 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 83709339 | 83711380 | 83709339 | ID=MS.gene75055 |
chr6.3 | mRNA | 83709339 | 83711380 | 83709339 | ID=MS.gene75055.t1;Parent=MS.gene75055 |
chr6.3 | exon | 83711312 | 83711380 | 83711312 | ID=MS.gene75055.t1.exon1;Parent=MS.gene75055.t1 |
chr6.3 | CDS | 83711312 | 83711380 | 83711312 | ID=cds.MS.gene75055.t1;Parent=MS.gene75055.t1 |
chr6.3 | exon | 83711134 | 83711213 | 83711134 | ID=MS.gene75055.t1.exon2;Parent=MS.gene75055.t1 |
chr6.3 | CDS | 83711134 | 83711213 | 83711134 | ID=cds.MS.gene75055.t1;Parent=MS.gene75055.t1 |
chr6.3 | exon | 83710617 | 83710761 | 83710617 | ID=MS.gene75055.t1.exon3;Parent=MS.gene75055.t1 |
chr6.3 | CDS | 83710617 | 83710761 | 83710617 | ID=cds.MS.gene75055.t1;Parent=MS.gene75055.t1 |
chr6.3 | exon | 83710394 | 83710525 | 83710394 | ID=MS.gene75055.t1.exon4;Parent=MS.gene75055.t1 |
chr6.3 | CDS | 83710394 | 83710525 | 83710394 | ID=cds.MS.gene75055.t1;Parent=MS.gene75055.t1 |
chr6.3 | exon | 83709339 | 83709629 | 83709339 | ID=MS.gene75055.t1.exon5;Parent=MS.gene75055.t1 |
chr6.3 | CDS | 83709339 | 83709629 | 83709339 | ID=cds.MS.gene75055.t1;Parent=MS.gene75055.t1 |
Gene Sequence |
Protein sequence |