Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75415.t1 | XP_003602068.1 | 98.8 | 328 | 4 | 0 | 1 | 328 | 86 | 413 | 3.50E-184 | 654.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75415.t1 | P43210 | 94.5 | 328 | 18 | 0 | 1 | 328 | 85 | 412 | 2.9e-179 | 629.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75415.t1 | B7FJZ6 | 98.8 | 328 | 4 | 0 | 1 | 328 | 86 | 413 | 2.5e-184 | 654.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene75415 | -0.817524 | 3.15E-52 | -1.69E-46 |
| MS.gene05087 | MS.gene75415 | 0.830117 | 3.52E-55 | -1.69E-46 |
| MS.gene052040 | MS.gene75415 | -0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene75415 | 0.812384 | 4.36E-51 | -1.69E-46 |
| MS.gene053495 | MS.gene75415 | 0.804597 | 2.00E-49 | -1.69E-46 |
| MS.gene055150 | MS.gene75415 | -0.815402 | 9.42E-52 | -1.69E-46 |
| MS.gene055634 | MS.gene75415 | 0.803449 | 3.47E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene75415 | 0.913786 | 4.11E-84 | -1.69E-46 |
| MS.gene059026 | MS.gene75415 | 0.84917 | 3.84E-60 | -1.69E-46 |
| MS.gene05985 | MS.gene75415 | 0.806987 | 6.30E-50 | -1.69E-46 |
| MS.gene059901 | MS.gene75415 | 0.806585 | 7.66E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene75415 | -0.826807 | 2.21E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75415.t1 | MTR_3g088610 | 98.780 | 328 | 4 | 0 | 1 | 328 | 86 | 413 | 0.0 | 673 |
| MS.gene75415.t1 | MTR_3g088610 | 98.905 | 274 | 3 | 0 | 1 | 274 | 86 | 359 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75415.t1 | AT1G69740 | 90.826 | 327 | 30 | 0 | 2 | 328 | 104 | 430 | 0.0 | 625 |
| MS.gene75415.t1 | AT1G69740 | 90.826 | 327 | 30 | 0 | 2 | 328 | 104 | 430 | 0.0 | 625 |
| MS.gene75415.t1 | AT1G69740 | 90.826 | 327 | 30 | 0 | 2 | 328 | 104 | 430 | 0.0 | 625 |
| MS.gene75415.t1 | AT1G44318 | 73.089 | 327 | 82 | 1 | 2 | 328 | 81 | 401 | 3.23e-178 | 499 |
Find 81 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAAGCATCTGGAATTT+TGG | 0.073758 | 3.3:-73546005 | None:intergenic |
| CTTTATTCACAACAGGTTTC+TGG | 0.142989 | 3.3:+73548892 | MS.gene75415:intron |
| GAAGCCTGGGCTTCCTTATT+TGG | 0.157019 | 3.3:+73548103 | MS.gene75415:CDS |
| TACACATCGATCCGCGTTTC+AGG | 0.190551 | 3.3:+73545001 | MS.gene75415:CDS |
| GAGTCCAATGCTTCCCTAAA+TGG | 0.193544 | 3.3:-73547774 | None:intergenic |
| TCATGCCCATCTGAAGAATA+TGG | 0.266166 | 3.3:-73546310 | None:intergenic |
| CGACGAGGACGCCTCTGAAT+TGG | 0.335567 | 3.3:-73544963 | None:intergenic |
| TGGTGAGTACTCGATGATTA+AGG | 0.335831 | 3.3:+73548912 | MS.gene75415:CDS |
| CAAAATTCCAGATGCTTTGA+AGG | 0.350403 | 3.3:+73546006 | MS.gene75415:CDS |
| AGCCTTATGATATCCAAATA+AGG | 0.360550 | 3.3:-73548116 | None:intergenic |
| AAAGCCTCTCTGTAGTTTGC+CGG | 0.370396 | 3.3:-73547937 | None:intergenic |
| TTCCTTATTTGGATATCATA+AGG | 0.373814 | 3.3:+73548114 | MS.gene75415:CDS |
| CTGTGTTCACTTACAAGATC+AGG | 0.387731 | 3.3:-73546181 | None:intergenic |
| AATAGAACCTTCAAAGCATC+TGG | 0.395086 | 3.3:-73546013 | None:intergenic |
| TGTCAGCACCGGCACGTCTA+AGG | 0.398953 | 3.3:-73548993 | None:intergenic |
| CTTGTAGAGCAAAATATGTT+AGG | 0.407581 | 3.3:-73549020 | None:intergenic |
| CATCCGGGCATAGCACCAAT+TGG | 0.415152 | 3.3:-73545358 | None:intergenic |
| AGTCCAATGCTTCCCTAAAT+GGG | 0.431083 | 3.3:-73547773 | None:intergenic |
| AGAAGGAGCTGATATTCTAT+TGG | 0.434691 | 3.3:+73547984 | MS.gene75415:CDS |
| ATCCGGGCATAGCACCAATT+GGG | 0.443550 | 3.3:-73545357 | None:intergenic |
| CCAACCAAGCCTGTAGCATC+CGG | 0.454753 | 3.3:-73545374 | None:intergenic |
| TAAAATGATTGATGAAGAAA+AGG | 0.462660 | 3.3:+73548948 | MS.gene75415:CDS |
| TGGCCCATTTAGGGAAGCAT+TGG | 0.464040 | 3.3:+73547770 | MS.gene75415:CDS |
| TCGAACTATACGATTACTTA+AGG | 0.469401 | 3.3:+73546150 | MS.gene75415:CDS |
| AGAACCTGGTATGCTGCAAT+TGG | 0.471730 | 3.3:-73548161 | None:intergenic |
| TTGCATGTGCAGGTGAAGCC+TGG | 0.473131 | 3.3:+73548089 | MS.gene75415:intron |
| TTGTATGCCTCATCTCCTGT+GGG | 0.474392 | 3.3:-73546109 | None:intergenic |
| GGTGAGGAGGACACCCCAAT+TGG | 0.474774 | 3.3:+73545343 | MS.gene75415:intron |
| GTGCTATGCCCGGATGCTAC+AGG | 0.477134 | 3.3:+73545365 | MS.gene75415:CDS |
| ACCCCAATTGGTGCTATGCC+CGG | 0.482806 | 3.3:+73545355 | MS.gene75415:CDS |
| GACCACATCTGCTCCAGCAC+GGG | 0.485822 | 3.3:-73547014 | None:intergenic |
| AAGCCTCTCTGTAGTTTGCC+GGG | 0.500631 | 3.3:-73547936 | None:intergenic |
| TGATGAAGAAAAGGTGATGA+TGG | 0.507074 | 3.3:+73548957 | MS.gene75415:CDS |
| CGACCATCCATCATATCGCT+GGG | 0.509074 | 3.3:-73547040 | None:intergenic |
| GACGGCATTGTTAGAGAAGA+TGG | 0.510196 | 3.3:+73546331 | MS.gene75415:CDS |
| CATGCCCATCTGAAGAATAT+GGG | 0.510541 | 3.3:-73546309 | None:intergenic |
| ACGACCATCCATCATATCGC+TGG | 0.517199 | 3.3:-73547041 | None:intergenic |
| AGTGGATAAACAAAATTAGC+AGG | 0.519439 | 3.3:-73545038 | None:intergenic |
| TTAAGTAATCGTATAGTTCG+AGG | 0.519833 | 3.3:-73546148 | None:intergenic |
| CGAGCAGCTCTCGATGCTGA+AGG | 0.524524 | 3.3:+73547076 | MS.gene75415:CDS |
| GCTGCCAATTGCAGCATACC+AGG | 0.526983 | 3.3:+73548157 | MS.gene75415:CDS |
| GGCCCGTGCTGGAGCAGATG+TGG | 0.528623 | 3.3:+73547012 | MS.gene75415:intron |
| CTCGATGATTAAGGCTGGTG+GGG | 0.530917 | 3.3:+73548921 | MS.gene75415:CDS |
| TGACCACATCTGCTCCAGCA+CGG | 0.535344 | 3.3:-73547015 | None:intergenic |
| TAATTCAGGTTGCAAAAGCA+CGG | 0.536608 | 3.3:+73545951 | MS.gene75415:intron |
| GTTGCAAAAGCACGGGATGT+TGG | 0.543180 | 3.3:+73545959 | MS.gene75415:CDS |
| GGTCAGCCCCAGCGATATGA+TGG | 0.544470 | 3.3:+73547033 | MS.gene75415:CDS |
| TACAGGCTTGGTTGGAGACA+CGG | 0.544880 | 3.3:+73545382 | MS.gene75415:CDS |
| TACTCGATGATTAAGGCTGG+TGG | 0.549281 | 3.3:+73548919 | MS.gene75415:CDS |
| TTAGACCCATATTCTTCAGA+TGG | 0.549974 | 3.3:+73546304 | MS.gene75415:CDS |
| ATTGTATGCCTCATCTCCTG+TGG | 0.553141 | 3.3:-73546110 | None:intergenic |
| GATGAGGCATACAATGAGAA+TGG | 0.554516 | 3.3:+73546118 | MS.gene75415:CDS |
| ATGCCCGGATGCTACAGGCT+TGG | 0.560235 | 3.3:+73545370 | MS.gene75415:CDS |
| TGCATGTGCAGGTGAAGCCT+GGG | 0.561269 | 3.3:+73548090 | MS.gene75415:intron |
| ATATCCAAATAAGGAAGCCC+AGG | 0.561431 | 3.3:-73548107 | None:intergenic |
| GAGAGGCTTTGACTGAAATG+AGG | 0.562495 | 3.3:+73547950 | MS.gene75415:CDS |
| AATTCAGGTTGCAAAAGCAC+GGG | 0.565064 | 3.3:+73545952 | MS.gene75415:intron |
| TAGACCCATATTCTTCAGAT+GGG | 0.565926 | 3.3:+73546305 | MS.gene75415:CDS |
| ACTCGATGATTAAGGCTGGT+GGG | 0.569222 | 3.3:+73548920 | MS.gene75415:CDS |
| CCGGATGCTACAGGCTTGGT+TGG | 0.571140 | 3.3:+73545374 | MS.gene75415:CDS |
| CAACCAAGCCTGTAGCATCC+GGG | 0.572018 | 3.3:-73545373 | None:intergenic |
| TGGTATGCTGCAATTGGCAG+CGG | 0.572258 | 3.3:-73548155 | None:intergenic |
| TTGTAAACAAGCTGTAGCCC+AGG | 0.575741 | 3.3:+73546816 | MS.gene75415:CDS |
| TTACTGTGCCTTAGACGTGC+CGG | 0.589296 | 3.3:+73548985 | MS.gene75415:CDS |
| GTATGCCTCATCTCCTGTGG+GGG | 0.598288 | 3.3:-73546107 | None:intergenic |
| AGAGGCTTTGACTGAAATGA+GGG | 0.601731 | 3.3:+73547951 | MS.gene75415:CDS |
| TATTCTTCAGATGGGCATGA+CGG | 0.608908 | 3.3:+73546313 | MS.gene75415:CDS |
| GAGACACGGACTGTTGCAAG+AGG | 0.609699 | 3.3:+73545396 | MS.gene75415:CDS |
| TGTTAGGATGATGTCAGCAC+CGG | 0.612290 | 3.3:-73549004 | None:intergenic |
| TGTGTTCACTTACAAGATCA+GGG | 0.616355 | 3.3:-73546180 | None:intergenic |
| AGCCCCAGCGATATGATGGA+TGG | 0.618898 | 3.3:+73547037 | MS.gene75415:CDS |
| ATGAGGGAAGATGAATCAGA+AGG | 0.619265 | 3.3:+73547967 | MS.gene75415:CDS |
| GAGTACTCGATGATTAAGGC+TGG | 0.624101 | 3.3:+73548916 | MS.gene75415:CDS |
| TCCGGGCATAGCACCAATTG+GGG | 0.638719 | 3.3:-73545356 | None:intergenic |
| TGTATGCCTCATCTCCTGTG+GGG | 0.643917 | 3.3:-73546108 | None:intergenic |
| CAAAAGCTATCAGATGAACC+CGG | 0.644138 | 3.3:+73547918 | MS.gene75415:intron |
| GATATGATGGATGGTCGTGT+TGG | 0.663532 | 3.3:+73547046 | MS.gene75415:CDS |
| TAAAGTTGTTTCCTGAAACG+CGG | 0.676695 | 3.3:-73545012 | None:intergenic |
| GACCATCCATCATATCGCTG+GGG | 0.723541 | 3.3:-73547039 | None:intergenic |
| GAACCCGGCAAACTACAGAG+AGG | 0.774109 | 3.3:+73547933 | MS.gene75415:CDS |
| GCTGATCTTCTATTACGACG+AGG | 0.800899 | 3.3:-73544978 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGTTTAGTAAAAAGA+AGG | + | chr3.3:73547237-73547256 | MS.gene75415:intron | 15.0% |
| !! | TAAACTAAAATTCAATACTA+AGG | - | chr3.3:73545913-73545932 | None:intergenic | 15.0% |
| !! | TTTAGAAGATAAAAAAGAAA+AGG | - | chr3.3:73545856-73545875 | None:intergenic | 15.0% |
| !!! | AATTTCTATTTTTGTAGAAT+TGG | - | chr3.3:73547626-73547645 | None:intergenic | 15.0% |
| !!! | TAATCTAAACATTTTACATT+TGG | + | chr3.3:73546472-73546491 | MS.gene75415:intron | 15.0% |
| !!! | TTGTGTTTTTATTTTATGAA+AGG | + | chr3.3:73546991-73547010 | MS.gene75415:intron | 15.0% |
| !! | AAATTAAAAAAGAAATCGTC+GGG | + | chr3.3:73546600-73546619 | MS.gene75415:intron | 20.0% |
| !! | GAAATTAAAAAAGAAATCGT+CGG | + | chr3.3:73546599-73546618 | MS.gene75415:intron | 20.0% |
| !! | TATATTCTACCAAAAATTGA+TGG | - | chr3.3:73546054-73546073 | None:intergenic | 20.0% |
| !!! | AAAAGGTTTTATGTTTGTTT+GGG | - | chr3.3:73545839-73545858 | None:intergenic | 20.0% |
| !!! | AGATTATGCAGATATTTTTT+TGG | + | chr3.3:73545642-73545661 | MS.gene75415:intron | 20.0% |
| !!! | ATGTTTTTTTTTTACAGCAA+TGG | - | chr3.3:73545612-73545631 | None:intergenic | 20.0% |
| !!! | TCTTTTTTAATTTCTTTTCC+AGG | - | chr3.3:73546593-73546612 | None:intergenic | 20.0% |
| !!! | TTATATTTTTATATCGAGCT+GGG | + | chr3.3:73548226-73548245 | MS.gene75415:intron | 20.0% |
| !!! | TTGAGAATGTTATATTTTTC+TGG | + | chr3.3:73546213-73546232 | MS.gene75415:intron | 20.0% |
| !!! | TTTTCCAGGAATAATATTAA+AGG | - | chr3.3:73546579-73546598 | None:intergenic | 20.0% |
| ! | AAAGATGTAGTTATATTACC+TGG | - | chr3.3:73546837-73546856 | None:intergenic | 25.0% |
| ! | AAATTTAGCTGAGAAAATGT+TGG | + | chr3.3:73545504-73545523 | MS.gene75415:intron | 25.0% |
| ! | AAGATGTAGTTATATTACCT+GGG | - | chr3.3:73546836-73546855 | None:intergenic | 25.0% |
| ! | AATTGACTGCTTTAATCTTA+AGG | - | chr3.3:73548797-73548816 | None:intergenic | 25.0% |
| ! | ACTAAATTATGTTAGTGTCT+TGG | - | chr3.3:73546971-73546990 | None:intergenic | 25.0% |
| ! | AGAAATTATGACTAACAAGA+TGG | + | chr3.3:73547639-73547658 | MS.gene75415:intron | 25.0% |
| ! | AGATAAGATACAAAAACAGT+TGG | + | chr3.3:73548691-73548710 | MS.gene75415:intron | 25.0% |
| ! | ATAACTCCTACAAGATATTA+AGG | - | chr3.3:73546769-73546788 | None:intergenic | 25.0% |
| ! | ATCATGTTCTGTAACAAAAT+AGG | - | chr3.3:73546402-73546421 | None:intergenic | 25.0% |
| ! | ATGATTTGAACTATTCTTGA+AGG | + | chr3.3:73546686-73546705 | MS.gene75415:intron | 25.0% |
| ! | ATTGACTGCTTTAATCTTAA+GGG | - | chr3.3:73548796-73548815 | None:intergenic | 25.0% |
| ! | CATCATTAACATAAAACCAA+AGG | - | chr3.3:73548828-73548847 | None:intergenic | 25.0% |
| ! | GTATATCCTTAATATCTTGT+AGG | + | chr3.3:73546760-73546779 | MS.gene75415:intron | 25.0% |
| ! | GTTGTTCATCATAGATATTA+TGG | + | chr3.3:73548747-73548766 | MS.gene75415:intron | 25.0% |
| ! | TAACCTTCATGTATAAAAAG+TGG | - | chr3.3:73545059-73545078 | None:intergenic | 25.0% |
| ! | TCTTTCCAAAAATGGTTAAT+CGG | + | chr3.3:73548328-73548347 | MS.gene75415:intron | 25.0% |
| ! | TGTACCTTTAATATTATTCC+TGG | + | chr3.3:73546572-73546591 | MS.gene75415:intron | 25.0% |
| ! | TTATGTATACGATCATAGTT+AGG | + | chr3.3:73548021-73548040 | MS.gene75415:intron | 25.0% |
| !! | AACATTTTACATTTGGATGA+TGG | + | chr3.3:73546479-73546498 | MS.gene75415:intron | 25.0% |
| !! | AATTTTATTCTTTACCGATC+TGG | + | chr3.3:73545668-73545687 | MS.gene75415:intron | 25.0% |
| !! | AGAGTTTGGATAGATTTTAT+TGG | + | chr3.3:73545695-73545714 | MS.gene75415:intron | 25.0% |
| !! | ATTCAAAAGTGGTATTGAAT+TGG | + | chr3.3:73545574-73545593 | MS.gene75415:intron | 25.0% |
| !! | CGCTTTATTGTAATAAACTT+TGG | + | chr3.3:73548564-73548583 | MS.gene75415:intron | 25.0% |
| !! | GAGTTTGGATAGATTTTATT+GGG | + | chr3.3:73545696-73545715 | MS.gene75415:intron | 25.0% |
| !! | TATCATGCATATTTTCTTGT+CGG | + | chr3.3:73547683-73547702 | MS.gene75415:intron | 25.0% |
| !! | TTATTGACTACAATCAAGAA+AGG | - | chr3.3:73546725-73546744 | None:intergenic | 25.0% |
| !! | TTCAAAAGTGGTATTGAATT+GGG | + | chr3.3:73545575-73545594 | MS.gene75415:intron | 25.0% |
| !! | TTCCTTATTTGGATATCATA+AGG | + | chr3.3:73548114-73548133 | MS.gene75415:CDS | 25.0% |
| !! | TTCTAAATTATGCCGTTTAT+TGG | + | chr3.3:73547719-73547738 | MS.gene75415:intron | 25.0% |
| !!! | AAAAAGATTTTGACGACAAA+AGG | - | chr3.3:73546373-73546392 | None:intergenic | 25.0% |
| !!! | AAGTTACCATTATTTTGTTC+AGG | + | chr3.3:73546879-73546898 | MS.gene75415:intron | 25.0% |
| !!! | AATTCAATACCACTTTTGAA+TGG | - | chr3.3:73545575-73545594 | None:intergenic | 25.0% |
| !!! | AGTTACCATTATTTTGTTCA+GGG | + | chr3.3:73546880-73546899 | MS.gene75415:intron | 25.0% |
| !!! | CTTATATTTTTATATCGAGC+TGG | + | chr3.3:73548225-73548244 | MS.gene75415:intron | 25.0% |
| !!! | GAAAAGGTTTTATGTTTGTT+TGG | - | chr3.3:73545840-73545859 | None:intergenic | 25.0% |
| !!! | GGCATTTTTTTTTATTGATC+TGG | + | chr3.3:73547299-73547318 | MS.gene75415:intron | 25.0% |
| !!! | TAAACTTATTTCTAAAGCTC+AGG | - | chr3.3:73547228-73547247 | None:intergenic | 25.0% |
| !!! | TAACCATTTTTGGAAAGAAT+CGG | - | chr3.3:73548326-73548345 | None:intergenic | 25.0% |
| !!! | TATATTTTTATATCGAGCTG+GGG | + | chr3.3:73548227-73548246 | MS.gene75415:intron | 25.0% |
| !!! | TATCCACTTTTTATACATGA+AGG | + | chr3.3:73545053-73545072 | MS.gene75415:CDS | 25.0% |
| AAACTCTTGTGAAACTGTTT+CGG | + | chr3.3:73545127-73545146 | MS.gene75415:intron | 30.0% | |
| AAATCGACAATTGCTAATGA+TGG | + | chr3.3:73547277-73547296 | MS.gene75415:intron | 30.0% | |
| AAGTATAGCAAGAAAAACCT+TGG | - | chr3.3:73546937-73546956 | None:intergenic | 30.0% | |
| AATCCGATTCTTTCCAAAAA+TGG | + | chr3.3:73548320-73548339 | MS.gene75415:intron | 30.0% | |
| AATCGACAATTGCTAATGAT+GGG | + | chr3.3:73547278-73547297 | MS.gene75415:intron | 30.0% | |
| AGAAACCTGTTGTGAATAAA+GGG | - | chr3.3:73548893-73548912 | None:intergenic | 30.0% | |
| AGAATCCCTGAACAAAATAA+TGG | - | chr3.3:73546888-73546907 | None:intergenic | 30.0% | |
| AGTCAATTAGAGAAAACCTT+TGG | + | chr3.3:73548809-73548828 | MS.gene75415:intron | 30.0% | |
| AGTGGATAAACAAAATTAGC+AGG | - | chr3.3:73545041-73545060 | None:intergenic | 30.0% | |
| ATGACATTACCATTCAAAAG+TGG | + | chr3.3:73545563-73545582 | MS.gene75415:intron | 30.0% | |
| CAGAACATGATTCATTTCAT+TGG | + | chr3.3:73546411-73546430 | MS.gene75415:intron | 30.0% | |
| CTATTATAGGTTGTAGCATT+GGG | + | chr3.3:73547376-73547395 | MS.gene75415:intron | 30.0% | |
| CTTACAAGTTTGTGTTAAGA+AGG | + | chr3.3:73547328-73547347 | MS.gene75415:intron | 30.0% | |
| CTTGTAGAGCAAAATATGTT+AGG | - | chr3.3:73549023-73549042 | None:intergenic | 30.0% | |
| CTTTCCAAAAATGGTTAATC+GGG | + | chr3.3:73548329-73548348 | MS.gene75415:intron | 30.0% | |
| GCAAAAACAGAAAGTAAGAT+CGG | - | chr3.3:73547167-73547186 | None:intergenic | 30.0% | |
| GTGAAGATATTCAAAATGTG+TGG | + | chr3.3:73547404-73547423 | MS.gene75415:intron | 30.0% | |
| TATACGATCATAGTTAGGAA+TGG | + | chr3.3:73548026-73548045 | MS.gene75415:intron | 30.0% | |
| TATCGATGGCTATCTATTAT+AGG | + | chr3.3:73547363-73547382 | MS.gene75415:intron | 30.0% | |
| TATTTACGTTGCCATATACT+TGG | + | chr3.3:73547885-73547904 | MS.gene75415:intron | 30.0% | |
| TCGAACTATACGATTACTTA+AGG | + | chr3.3:73546150-73546169 | MS.gene75415:CDS | 30.0% | |
| TCTATTATAGGTTGTAGCAT+TGG | + | chr3.3:73547375-73547394 | MS.gene75415:intron | 30.0% | |
| TGTAATGAGAAGTTCAACAT+TGG | - | chr3.3:73545732-73545751 | None:intergenic | 30.0% | |
| TTAAGTAATCGTATAGTTCG+AGG | - | chr3.3:73546151-73546170 | None:intergenic | 30.0% | |
| TTATGACTAACAAGATGGAT+TGG | + | chr3.3:73547644-73547663 | MS.gene75415:intron | 30.0% | |
| TTTAGAAAATTTGCATGTGC+AGG | + | chr3.3:73548079-73548098 | MS.gene75415:intron | 30.0% | |
| TTTATGCCAAGAACTAGAAT+GGG | - | chr3.3:73548194-73548213 | None:intergenic | 30.0% | |
| ! | AATATTTGAACCCTTTTTGC+AGG | + | chr3.3:73545322-73545341 | MS.gene75415:intron | 30.0% |
| ! | AATTCCCGATTAACCATTTT+TGG | - | chr3.3:73548336-73548355 | None:intergenic | 30.0% |
| ! | ACGTCTTTTTATCTCCAAAA+CGG | - | chr3.3:73547806-73547825 | None:intergenic | 30.0% |
| ! | AGCCTTATGATATCCAAATA+AGG | - | chr3.3:73548119-73548138 | None:intergenic | 30.0% |
| ! | CAGTGAGCATTTTATAATTC+AGG | + | chr3.3:73545937-73545956 | MS.gene75415:intron | 30.0% |
| ! | GATTTTTGTGTGGAGAAAAA+AGG | + | chr3.3:73549049-73549068 | MS.gene75415:CDS | 30.0% |
| ! | TCAAAAGTGGTATTGAATTG+GGG | + | chr3.3:73545576-73545595 | MS.gene75415:intron | 30.0% |
| ! | TGTTGCAAGAGGTTTTTATA+TGG | + | chr3.3:73545407-73545426 | MS.gene75415:intron | 30.0% |
| ! | TTCATTTTATGGCCCATTTA+GGG | + | chr3.3:73547761-73547780 | MS.gene75415:CDS | 30.0% |
| !! | ATACATGAAGGTTAGTCTTA+AGG | + | chr3.3:73545065-73545084 | MS.gene75415:intron | 30.0% |
| !! | TACATACATTGTTAGCTTGT+AGG | + | chr3.3:73545262-73545281 | MS.gene75415:intron | 30.0% |
| !! | TTCAAAGCATCTGGAATTTT+GGG | - | chr3.3:73546007-73546026 | None:intergenic | 30.0% |
| AAACCTGTTGTGAATAAAGG+GGG | - | chr3.3:73548891-73548910 | None:intergenic | 35.0% | |
| AATCGTCGGGAATTAAATTG+TGG | + | chr3.3:73546613-73546632 | MS.gene75415:intron | 35.0% | |
| AATTTGAACGCTACGGTTAT+TGG | - | chr3.3:73547521-73547540 | None:intergenic | 35.0% | |
| ACAGAAAGTAAGATCGGAAA+AGG | - | chr3.3:73547161-73547180 | None:intergenic | 35.0% | |
| ACTGCTTTAATCTTAAGGGT+AGG | - | chr3.3:73548792-73548811 | None:intergenic | 35.0% | |
| AGAAGGAGCTGATATTCTAT+TGG | + | chr3.3:73547984-73548003 | MS.gene75415:CDS | 35.0% | |
| AGCAAAGTAATTTGATCGCT+TGG | + | chr3.3:73547129-73547148 | MS.gene75415:intron | 35.0% | |
| AGTAAGATCGGAAAAGGAAA+TGG | - | chr3.3:73547155-73547174 | None:intergenic | 35.0% | |
| ATTATGTTAGTGTCTTGGTG+CGG | - | chr3.3:73546966-73546985 | None:intergenic | 35.0% | |
| CAAAATTCCAGATGCTTTGA+AGG | + | chr3.3:73546006-73546025 | MS.gene75415:CDS | 35.0% | |
| CAAATATAGTGAGATGCTCA+TGG | - | chr3.3:73547566-73547585 | None:intergenic | 35.0% | |
| CAACAGTTGAACAAGGATAT+TGG | - | chr3.3:73546258-73546277 | None:intergenic | 35.0% | |
| CAATAATTTCCAATGCATGC+AGG | - | chr3.3:73547189-73547208 | None:intergenic | 35.0% | |
| CAGAAACCTGTTGTGAATAA+AGG | - | chr3.3:73548894-73548913 | None:intergenic | 35.0% | |
| CTAAAGGAATTTGAACGCTA+CGG | - | chr3.3:73547528-73547547 | None:intergenic | 35.0% | |
| CTGCTTTAATCTTAAGGGTA+GGG | - | chr3.3:73548791-73548810 | None:intergenic | 35.0% | |
| CTTTATTCACAACAGGTTTC+TGG | + | chr3.3:73548892-73548911 | MS.gene75415:intron | 35.0% | |
| GAAAAACCTTGGAACATAGA+AGG | - | chr3.3:73546926-73546945 | None:intergenic | 35.0% | |
| GAAACCTGTTGTGAATAAAG+GGG | - | chr3.3:73548892-73548911 | None:intergenic | 35.0% | |
| GTTCAAATCATGCAAATCCT+AGG | - | chr3.3:73546677-73546696 | None:intergenic | 35.0% | |
| GTTTATGCCAAGAACTAGAA+TGG | - | chr3.3:73548195-73548214 | None:intergenic | 35.0% | |
| TAGACCCATATTCTTCAGAT+GGG | + | chr3.3:73546305-73546324 | MS.gene75415:CDS | 35.0% | |
| TCATGTGAATCTTCCAGTTT+GGG | + | chr3.3:73548386-73548405 | MS.gene75415:intron | 35.0% | |
| TCATGTGTACATCTTCAACT+AGG | + | chr3.3:73546856-73546875 | MS.gene75415:intron | 35.0% | |
| TGAACTATTCTTGAAGGAAG+TGG | + | chr3.3:73546692-73546711 | MS.gene75415:intron | 35.0% | |
| TGTGTTCACTTACAAGATCA+GGG | - | chr3.3:73546183-73546202 | None:intergenic | 35.0% | |
| TTACCAACACAAGTTCATAC+AGG | - | chr3.3:73546651-73546670 | None:intergenic | 35.0% | |
| TTAGACCCATATTCTTCAGA+TGG | + | chr3.3:73546304-73546323 | MS.gene75415:CDS | 35.0% | |
| ! | AATAGAACCTTCAAAGCATC+TGG | - | chr3.3:73546016-73546035 | None:intergenic | 35.0% |
| ! | CGTCTTTTTATCTCCAAAAC+GGG | - | chr3.3:73547805-73547824 | None:intergenic | 35.0% |
| ! | CTTTTTCTGTAGAGCTTTTG+TGG | + | chr3.3:73545227-73545246 | MS.gene75415:intron | 35.0% |
| ! | GTCTTTTTATCTCCAAAACG+GGG | - | chr3.3:73547804-73547823 | None:intergenic | 35.0% |
| ! | GTTCATTTTATGGCCCATTT+AGG | + | chr3.3:73547760-73547779 | MS.gene75415:CDS | 35.0% |
| ! | TAAAGTTGTTTCCTGAAACG+CGG | - | chr3.3:73545015-73545034 | None:intergenic | 35.0% |
| ! | TCACACTTGCCATCAATTTT+TGG | + | chr3.3:73546042-73546061 | MS.gene75415:intron | 35.0% |
| ! | TCTTTTTATCTCCAAAACGG+GGG | - | chr3.3:73547803-73547822 | None:intergenic | 35.0% |
| ! | TTGGACTTTGAAAATGTAGC+AGG | + | chr3.3:73545523-73545542 | MS.gene75415:intron | 35.0% |
| !! | ACATTGCTTGATTGTTTCTG+AGG | + | chr3.3:73545749-73545768 | MS.gene75415:intron | 35.0% |
| !! | CTTCAAAGCATCTGGAATTT+TGG | - | chr3.3:73546008-73546027 | None:intergenic | 35.0% |
| !! | GTTAGTCTTAAGGACATGTT+TGG | + | chr3.3:73545075-73545094 | MS.gene75415:intron | 35.0% |
| !! | TAATTCAGGTTGCAAAAGCA+CGG | + | chr3.3:73545951-73545970 | MS.gene75415:intron | 35.0% |
| !! | TCAAAGCATCTGGAATTTTG+GGG | - | chr3.3:73546006-73546025 | None:intergenic | 35.0% |
| ACCTGAACAACAGTTGAACA+AGG | - | chr3.3:73546265-73546284 | None:intergenic | 40.0% | |
| ACCTGTTGGCAACCAATAAA+CGG | - | chr3.3:73547734-73547753 | None:intergenic | 40.0% | |
| AGAAACCAGCTTGTGCATAA+TGG | - | chr3.3:73547460-73547479 | None:intergenic | 40.0% | |
| AGCAGTTCATATTCCCAAAC+TGG | - | chr3.3:73548402-73548421 | None:intergenic | 40.0% | |
| AGTCCAATGCTTCCCTAAAT+GGG | - | chr3.3:73547776-73547795 | None:intergenic | 40.0% | |
| ATATCCAAATAAGGAAGCCC+AGG | - | chr3.3:73548110-73548129 | None:intergenic | 40.0% | |
| ATGAGGGAAGATGAATCAGA+AGG | + | chr3.3:73547967-73547986 | MS.gene75415:CDS | 40.0% | |
| CAAAAGCTATCAGATGAACC+CGG | + | chr3.3:73547918-73547937 | MS.gene75415:intron | 40.0% | |
| CAACACAAGTTCATACAGGA+AGG | - | chr3.3:73546647-73546666 | None:intergenic | 40.0% | |
| CATGCCCATCTGAAGAATAT+GGG | - | chr3.3:73546312-73546331 | None:intergenic | 40.0% | |
| CATTTCCATTATGCACAAGC+TGG | + | chr3.3:73547452-73547471 | MS.gene75415:intron | 40.0% | |
| CTCATGTGAATCTTCCAGTT+TGG | + | chr3.3:73548385-73548404 | MS.gene75415:intron | 40.0% | |
| CTGGAACATCATTTAGACAG+TGG | + | chr3.3:73548652-73548671 | MS.gene75415:intron | 40.0% | |
| CTGTGTTCACTTACAAGATC+AGG | - | chr3.3:73546184-73546203 | None:intergenic | 40.0% | |
| CTTCCTGTATGAACTTGTGT+TGG | + | chr3.3:73546645-73546664 | MS.gene75415:intron | 40.0% | |
| GATGAGGCATACAATGAGAA+TGG | + | chr3.3:73546118-73546137 | MS.gene75415:CDS | 40.0% | |
| GGAGCTGATATTCTATTGGT+TGG | + | chr3.3:73547988-73548007 | MS.gene75415:intron | 40.0% | |
| GGATCTAGACTTACTATCGA+TGG | + | chr3.3:73547349-73547368 | MS.gene75415:intron | 40.0% | |
| GTTCTCCAATGAGCAAATCA+GGG | - | chr3.3:73547604-73547623 | None:intergenic | 40.0% | |
| TACTCACCTTCTATGTTCCA+AGG | + | chr3.3:73546917-73546936 | MS.gene75415:intron | 40.0% | |
| TATTCTTCAGATGGGCATGA+CGG | + | chr3.3:73546313-73546332 | MS.gene75415:CDS | 40.0% | |
| TCATGCCCATCTGAAGAATA+TGG | - | chr3.3:73546313-73546332 | None:intergenic | 40.0% | |
| TCCAAACTCTTAGACCAGAT+CGG | - | chr3.3:73545685-73545704 | None:intergenic | 40.0% | |
| TCCTTGTTCAACTGTTGTTC+AGG | + | chr3.3:73546261-73546280 | MS.gene75415:intron | 40.0% | |
| TGGCACTCAGTTCAATTTCA+AGG | - | chr3.3:73547837-73547856 | None:intergenic | 40.0% | |
| TGGTGAGTACTCGATGATTA+AGG | + | chr3.3:73548912-73548931 | MS.gene75415:CDS | 40.0% | |
| ! | ACTTGTGTTGGTAAAAGCCT+AGG | + | chr3.3:73546657-73546676 | MS.gene75415:intron | 40.0% |
| ! | AGAGGCTTTGACTGAAATGA+GGG | + | chr3.3:73547951-73547970 | MS.gene75415:CDS | 40.0% |
| ! | AGGTACGCGAGTTCATTTTA+TGG | + | chr3.3:73547750-73547769 | MS.gene75415:intron | 40.0% |
| ! | TAATGCTAGAAGTATGCTGC+TGG | - | chr3.3:73546520-73546539 | None:intergenic | 40.0% |
| ! | TAGGTTGTAGCATTGGGTAT+CGG | + | chr3.3:73547382-73547401 | MS.gene75415:intron | 40.0% |
| !! | AATTCAGGTTGCAAAAGCAC+GGG | + | chr3.3:73545952-73545971 | MS.gene75415:intron | 40.0% |
| !! | ATTGTCCCTGATTTGCTCAT+TGG | + | chr3.3:73547596-73547615 | MS.gene75415:intron | 40.0% |
| AAATGAACTCGCGTACCTGT+TGG | - | chr3.3:73547748-73547767 | None:intergenic | 45.0% | |
| ACCGATCTGGTCTAAGAGTT+TGG | + | chr3.3:73545681-73545700 | MS.gene75415:intron | 45.0% | |
| ACGTTGCCATATACTTGGTC+TGG | + | chr3.3:73547890-73547909 | MS.gene75415:intron | 45.0% | |
| ACTCGATGATTAAGGCTGGT+GGG | + | chr3.3:73548920-73548939 | MS.gene75415:CDS | 45.0% | |
| AGAACCTGGTATGCTGCAAT+TGG | - | chr3.3:73548164-73548183 | None:intergenic | 45.0% | |
| ATGTTCCAGACCTTACAGAC+GGG | - | chr3.3:73548641-73548660 | None:intergenic | 45.0% | |
| ATTGTATGCCTCATCTCCTG+TGG | - | chr3.3:73546113-73546132 | None:intergenic | 45.0% | |
| CAGAAAAAGCCGAGAGCAAA+CGG | - | chr3.3:73545216-73545235 | None:intergenic | 45.0% | |
| GACGGCATTGTTAGAGAAGA+TGG | + | chr3.3:73546331-73546350 | MS.gene75415:CDS | 45.0% | |
| GAGTACTCGATGATTAAGGC+TGG | + | chr3.3:73548916-73548935 | MS.gene75415:CDS | 45.0% | |
| GAGTCCAATGCTTCCCTAAA+TGG | - | chr3.3:73547777-73547796 | None:intergenic | 45.0% | |
| GATGTTCCAGACCTTACAGA+CGG | - | chr3.3:73548642-73548661 | None:intergenic | 45.0% | |
| GCAGCTACAAGATGCACTAA+AGG | - | chr3.3:73547544-73547563 | None:intergenic | 45.0% | |
| GCTGATCTTCTATTACGACG+AGG | - | chr3.3:73544981-73545000 | None:intergenic | 45.0% | |
| GGTTCTCCAATGAGCAAATC+AGG | - | chr3.3:73547605-73547624 | None:intergenic | 45.0% | |
| GTTCAGCCAGACCAAGTATA+TGG | - | chr3.3:73547899-73547918 | None:intergenic | 45.0% | |
| TACTCGATGATTAAGGCTGG+TGG | + | chr3.3:73548919-73548938 | MS.gene75415:CDS | 45.0% | |
| TGACCCCCTTTATTCACAAC+AGG | + | chr3.3:73548885-73548904 | MS.gene75415:intron | 45.0% | |
| TGTTAGGATGATGTCAGCAC+CGG | - | chr3.3:73549007-73549026 | None:intergenic | 45.0% | |
| TTACAGACGGGTAAGGGAAA+AGG | - | chr3.3:73548629-73548648 | None:intergenic | 45.0% | |
| TTCTTGAAGGAAGTGGCAAG+TGG | + | chr3.3:73546699-73546718 | MS.gene75415:intron | 45.0% | |
| TTGTAAACAAGCTGTAGCCC+AGG | + | chr3.3:73546816-73546835 | MS.gene75415:CDS | 45.0% | |
| TTGTATGCCTCATCTCCTGT+GGG | - | chr3.3:73546112-73546131 | None:intergenic | 45.0% | |
| ! | AAAGCCTCTCTGTAGTTTGC+CGG | - | chr3.3:73547940-73547959 | None:intergenic | 45.0% |
| ! | ATTTTATGAAAGGCCCGTGC+TGG | + | chr3.3:73547001-73547020 | MS.gene75415:intron | 45.0% |
| ! | CAAGCTGCGAGATTTTTGTG+TGG | + | chr3.3:73549039-73549058 | MS.gene75415:CDS | 45.0% |
| ! | GAGAGGCTTTGACTGAAATG+AGG | + | chr3.3:73547950-73547969 | MS.gene75415:CDS | 45.0% |
| ! | TTGAACCCTTTTTGCAGGTG+AGG | + | chr3.3:73545327-73545346 | MS.gene75415:intron | 45.0% |
| ! | TTTTCCCTTACCCGTCTGTA+AGG | + | chr3.3:73548628-73548647 | MS.gene75415:intron | 45.0% |
| !! | GATATGATGGATGGTCGTGT+TGG | + | chr3.3:73547046-73547065 | MS.gene75415:CDS | 45.0% |
| !!! | CTGTTTTTGCCTGCATGCAT+TGG | + | chr3.3:73547177-73547196 | MS.gene75415:intron | 45.0% |
| !!! | AAAAAAAAAACATTTTTAAA+GGG | + | chr3.3:73545619-73545638 | MS.gene75415:intron | 5.0% |
| !!! | TAAAAAAAAAACATTTTTAA+AGG | + | chr3.3:73545618-73545637 | MS.gene75415:intron | 5.0% |
| !!! | TTTAAAATAGATTAAATATT+TGG | - | chr3.3:73547857-73547876 | None:intergenic | 5.0% |
| ACGACCATCCATCATATCGC+TGG | - | chr3.3:73547044-73547063 | None:intergenic | 50.0% | |
| ACGCTACGGTTATTGGCGAA+AGG | - | chr3.3:73547514-73547533 | None:intergenic | 50.0% | |
| AGCTTGCATCCGTTTGCTCT+CGG | + | chr3.3:73545204-73545223 | MS.gene75415:intron | 50.0% | |
| ATCCGGGCATAGCACCAATT+GGG | - | chr3.3:73545360-73545379 | None:intergenic | 50.0% | |
| ATCTCCTGTGGGGGTCTAAA+GGG | - | chr3.3:73546101-73546120 | None:intergenic | 50.0% | |
| CAGACCTTACAGACGGGTAA+GGG | - | chr3.3:73548635-73548654 | None:intergenic | 50.0% | |
| CAGCATACCAGGTTCTTCTC+TGG | + | chr3.3:73548168-73548187 | MS.gene75415:intron | 50.0% | |
| CGACCATCCATCATATCGCT+GGG | - | chr3.3:73547043-73547062 | None:intergenic | 50.0% | |
| CTCGATGATTAAGGCTGGTG+GGG | + | chr3.3:73548921-73548940 | MS.gene75415:CDS | 50.0% | |
| GAAGCCTGGGCTTCCTTATT+TGG | + | chr3.3:73548103-73548122 | MS.gene75415:CDS | 50.0% | |
| GACCATCCATCATATCGCTG+GGG | - | chr3.3:73547042-73547061 | None:intergenic | 50.0% | |
| GTCCTCCTCACCTGCAAAAA+GGG | - | chr3.3:73545335-73545354 | None:intergenic | 50.0% | |
| TACACATCGATCCGCGTTTC+AGG | + | chr3.3:73545001-73545020 | MS.gene75415:CDS | 50.0% | |
| TGGTATGCTGCAATTGGCAG+CGG | - | chr3.3:73548158-73548177 | None:intergenic | 50.0% | |
| TGTATGCCTCATCTCCTGTG+GGG | - | chr3.3:73546111-73546130 | None:intergenic | 50.0% | |
| TGTCCTCCTCACCTGCAAAA+AGG | - | chr3.3:73545336-73545355 | None:intergenic | 50.0% | |
| TTACTGTGCCTTAGACGTGC+CGG | + | chr3.3:73548985-73549004 | MS.gene75415:CDS | 50.0% | |
| TTTATATCGAGCTGGGGCAC+AGG | + | chr3.3:73548233-73548252 | MS.gene75415:intron | 50.0% | |
| ! | AACCCTTTTTGCAGGTGAGG+AGG | + | chr3.3:73545330-73545349 | MS.gene75415:intron | 50.0% |
| ! | AAGCCTCTCTGTAGTTTGCC+GGG | - | chr3.3:73547939-73547958 | None:intergenic | 50.0% |
| ! | GCCGTTTATTGGTTGCCAAC+AGG | + | chr3.3:73547730-73547749 | MS.gene75415:intron | 50.0% |
| ! | GTTGCAAAAGCACGGGATGT+TGG | + | chr3.3:73545959-73545978 | MS.gene75415:CDS | 50.0% |
| ! | TACAGGCTTGGTTGGAGACA+CGG | + | chr3.3:73545382-73545401 | MS.gene75415:CDS | 50.0% |
| ! | TGGCCCATTTAGGGAAGCAT+TGG | + | chr3.3:73547770-73547789 | MS.gene75415:CDS | 50.0% |
| ! | TTGGACTCAAACCCCCGTTT+TGG | + | chr3.3:73547789-73547808 | MS.gene75415:CDS | 50.0% |
| !! | CTCTGGCCCATTCTAGTTCT+TGG | + | chr3.3:73548185-73548204 | MS.gene75415:intron | 50.0% |
| CAACCAAGCCTGTAGCATCC+GGG | - | chr3.3:73545376-73545395 | None:intergenic | 55.0% | |
| CATCCGGGCATAGCACCAAT+TGG | - | chr3.3:73545361-73545380 | None:intergenic | 55.0% | |
| CATCTCCTGTGGGGGTCTAA+AGG | - | chr3.3:73546102-73546121 | None:intergenic | 55.0% | |
| CCAACCAAGCCTGTAGCATC+CGG | - | chr3.3:73545377-73545396 | None:intergenic | 55.0% | |
| CCAGACCTTACAGACGGGTA+AGG | - | chr3.3:73548636-73548655 | None:intergenic | 55.0% | |
| CCTTACCCGTCTGTAAGGTC+TGG | + | chr3.3:73548633-73548652 | MS.gene75415:intron | 55.0% | |
| GAACCCGGCAAACTACAGAG+AGG | + | chr3.3:73547933-73547952 | MS.gene75415:CDS | 55.0% | |
| GAATGGGCCAGAGAAGAACC+TGG | - | chr3.3:73548178-73548197 | None:intergenic | 55.0% | |
| GCTGCCAATTGCAGCATACC+AGG | + | chr3.3:73548157-73548176 | MS.gene75415:CDS | 55.0% | |
| GTATGCCTCATCTCCTGTGG+GGG | - | chr3.3:73546110-73546129 | None:intergenic | 55.0% | |
| TCCGGGCATAGCACCAATTG+GGG | - | chr3.3:73545359-73545378 | None:intergenic | 55.0% | |
| TCTCCTGTGGGGGTCTAAAG+GGG | - | chr3.3:73546100-73546119 | None:intergenic | 55.0% | |
| TGACCACATCTGCTCCAGCA+CGG | - | chr3.3:73547018-73547037 | None:intergenic | 55.0% | |
| TGCATGTGCAGGTGAAGCCT+GGG | + | chr3.3:73548090-73548109 | MS.gene75415:intron | 55.0% | |
| TTAGACCCCCACAGGAGATG+AGG | + | chr3.3:73546102-73546121 | MS.gene75415:intron | 55.0% | |
| TTGCATGTGCAGGTGAAGCC+TGG | + | chr3.3:73548089-73548108 | MS.gene75415:intron | 55.0% | |
| ! | AGCCCCAGCGATATGATGGA+TGG | + | chr3.3:73547037-73547056 | MS.gene75415:CDS | 55.0% |
| ! | GAGACACGGACTGTTGCAAG+AGG | + | chr3.3:73545396-73545415 | MS.gene75415:CDS | 55.0% |
| ! | GAGCTGGGGCACAGGTTTTA+TGG | + | chr3.3:73548241-73548260 | MS.gene75415:intron | 55.0% |
| ! | GGGTAGGGTGTCAAGCATCA+TGG | - | chr3.3:73548776-73548795 | None:intergenic | 55.0% |
| !! | ACCCCAATTGGTGCTATGCC+CGG | + | chr3.3:73545355-73545374 | MS.gene75415:CDS | 55.0% |
| ATGCCCGGATGCTACAGGCT+TGG | + | chr3.3:73545370-73545389 | MS.gene75415:CDS | 60.0% | |
| CGACGAGGACGCCTCTGAAT+TGG | - | chr3.3:73544966-73544985 | None:intergenic | 60.0% | |
| CGAGCAGCTCTCGATGCTGA+AGG | + | chr3.3:73547076-73547095 | MS.gene75415:CDS | 60.0% | |
| CTCCTGTGGGGGTCTAAAGG+GGG | - | chr3.3:73546099-73546118 | None:intergenic | 60.0% | |
| GACCACATCTGCTCCAGCAC+GGG | - | chr3.3:73547017-73547036 | None:intergenic | 60.0% | |
| GGTCAGCCCCAGCGATATGA+TGG | + | chr3.3:73547033-73547052 | MS.gene75415:CDS | 60.0% | |
| GGTGAGGAGGACACCCCAAT+TGG | + | chr3.3:73545343-73545362 | MS.gene75415:intron | 60.0% | |
| GTGCTATGCCCGGATGCTAC+AGG | + | chr3.3:73545365-73545384 | MS.gene75415:CDS | 60.0% | |
| TTCCCCCTTTAGACCCCCAC+AGG | + | chr3.3:73546094-73546113 | MS.gene75415:intron | 60.0% | |
| ! | CCGGATGCTACAGGCTTGGT+TGG | + | chr3.3:73545374-73545393 | MS.gene75415:CDS | 60.0% |
| !! | TGTCAGCACCGGCACGTCTA+AGG | - | chr3.3:73548996-73549015 | None:intergenic | 60.0% |
| GGCCCGTGCTGGAGCAGATG+TGG | + | chr3.3:73547012-73547031 | MS.gene75415:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 73544963 | 73549074 | 73544963 | ID=MS.gene75415 |
| chr3.3 | mRNA | 73544963 | 73549074 | 73544963 | ID=MS.gene75415.t1;Parent=MS.gene75415 |
| chr3.3 | exon | 73544963 | 73545074 | 73544963 | ID=MS.gene75415.t1.exon1;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73544963 | 73545074 | 73544963 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73545344 | 73545417 | 73545344 | ID=MS.gene75415.t1.exon2;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73545344 | 73545417 | 73545344 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73545959 | 73546027 | 73545959 | ID=MS.gene75415.t1.exon3;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73545959 | 73546027 | 73545959 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73546106 | 73546189 | 73546106 | ID=MS.gene75415.t1.exon4;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73546106 | 73546189 | 73546106 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73546283 | 73546352 | 73546283 | ID=MS.gene75415.t1.exon5;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73546283 | 73546352 | 73546283 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73546782 | 73546837 | 73546782 | ID=MS.gene75415.t1.exon6;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73546782 | 73546837 | 73546782 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73547013 | 73547134 | 73547013 | ID=MS.gene75415.t1.exon7;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73547013 | 73547134 | 73547013 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73547752 | 73547823 | 73547752 | ID=MS.gene75415.t1.exon8;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73547752 | 73547823 | 73547752 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73547924 | 73548005 | 73547924 | ID=MS.gene75415.t1.exon9;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73547924 | 73548005 | 73547924 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73548101 | 73548178 | 73548101 | ID=MS.gene75415.t1.exon10;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73548101 | 73548178 | 73548101 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| chr3.3 | exon | 73548907 | 73549074 | 73548907 | ID=MS.gene75415.t1.exon11;Parent=MS.gene75415.t1 |
| chr3.3 | CDS | 73548907 | 73549074 | 73548907 | ID=cds.MS.gene75415.t1;Parent=MS.gene75415.t1 |
| Gene Sequence |
| Protein sequence |
