Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75481.t1 | XP_003601945.1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 2.30E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75481.t1 | Q8LAM0 | 82.4 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 1.6e-173 | 610.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75481.t1 | G7J3R1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 1.7e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene75481 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene75481 | 0.8154 | 9.43E-52 | -1.69E-46 |
| MS.gene050752 | MS.gene75481 | 0.802913 | 4.48E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene75481 | 0.801632 | 8.22E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene75481 | 0.804086 | 2.56E-49 | -1.69E-46 |
| MS.gene052197 | MS.gene75481 | 0.871755 | 5.37E-67 | -1.69E-46 |
| MS.gene052342 | MS.gene75481 | 0.802136 | 6.47E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene75481 | 0.802658 | 5.05E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene75481 | 0.803685 | 3.10E-49 | -1.69E-46 |
| MS.gene057890 | MS.gene75481 | -0.836084 | 1.15E-56 | -1.69E-46 |
| MS.gene06010 | MS.gene75481 | 0.813814 | 2.12E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene75481 | 0.814128 | 1.80E-51 | -1.69E-46 |
| MS.gene060259 | MS.gene75481 | 0.813046 | 3.12E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75481.t1 | MTR_3g087140 | 98.361 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 0.0 | 752 |
| MS.gene75481.t1 | MTR_8g090190 | 86.501 | 363 | 49 | 0 | 1 | 363 | 1 | 363 | 0.0 | 662 |
| MS.gene75481.t1 | MTR_3g100480 | 30.347 | 346 | 190 | 10 | 23 | 360 | 584 | 886 | 3.54e-37 | 143 |
| MS.gene75481.t1 | MTR_6g022290 | 28.531 | 354 | 192 | 9 | 17 | 360 | 23 | 325 | 3.15e-35 | 135 |
| MS.gene75481.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 5.71e-35 | 136 |
| MS.gene75481.t1 | MTR_3g100480 | 28.226 | 372 | 194 | 10 | 23 | 360 | 584 | 916 | 6.45e-35 | 136 |
| MS.gene75481.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 6.65e-35 | 136 |
| MS.gene75481.t1 | MTR_6g022310 | 28.933 | 356 | 188 | 10 | 17 | 360 | 121 | 423 | 7.18e-35 | 135 |
| MS.gene75481.t1 | MTR_5g030360 | 29.855 | 345 | 182 | 10 | 24 | 360 | 155 | 447 | 7.55e-35 | 135 |
| MS.gene75481.t1 | MTR_5g066000 | 31.481 | 324 | 186 | 10 | 23 | 340 | 542 | 835 | 1.41e-34 | 135 |
| MS.gene75481.t1 | MTR_6g022300 | 27.666 | 347 | 190 | 9 | 24 | 360 | 68 | 363 | 1.68e-31 | 125 |
| MS.gene75481.t1 | MTR_1g014680 | 29.781 | 319 | 186 | 8 | 24 | 334 | 182 | 470 | 2.89e-31 | 125 |
| MS.gene75481.t1 | MTR_4g115880 | 26.450 | 431 | 189 | 14 | 15 | 360 | 191 | 578 | 1.60e-30 | 122 |
| MS.gene75481.t1 | MTR_1g014260 | 29.539 | 369 | 186 | 14 | 16 | 340 | 176 | 514 | 2.01e-30 | 122 |
| MS.gene75481.t1 | MTR_5g032380 | 29.102 | 323 | 190 | 8 | 23 | 338 | 424 | 714 | 3.68e-30 | 122 |
| MS.gene75481.t1 | MTR_2g070390 | 27.746 | 346 | 211 | 8 | 23 | 365 | 22 | 331 | 4.81e-29 | 119 |
| MS.gene75481.t1 | MTR_2g071620 | 30.172 | 348 | 187 | 12 | 24 | 360 | 465 | 767 | 2.30e-28 | 117 |
| MS.gene75481.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 3.89e-28 | 116 |
| MS.gene75481.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 4.17e-28 | 116 |
| MS.gene75481.t1 | MTR_5g430360 | 29.655 | 290 | 150 | 8 | 78 | 360 | 37 | 279 | 8.59e-28 | 114 |
| MS.gene75481.t1 | MTR_8g471100 | 26.744 | 344 | 193 | 9 | 24 | 360 | 213 | 504 | 9.19e-26 | 108 |
| MS.gene75481.t1 | MTR_8g067060 | 26.744 | 344 | 193 | 9 | 24 | 360 | 204 | 495 | 1.19e-25 | 108 |
| MS.gene75481.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.60e-25 | 108 |
| MS.gene75481.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.67e-25 | 108 |
| MS.gene75481.t1 | MTR_2g060050 | 27.100 | 369 | 221 | 13 | 24 | 363 | 183 | 532 | 8.43e-22 | 97.1 |
| MS.gene75481.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 201 | 477 | 3.60e-21 | 95.9 |
| MS.gene75481.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 202 | 478 | 3.98e-21 | 95.5 |
| MS.gene75481.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 200 | 476 | 4.05e-21 | 95.5 |
| MS.gene75481.t1 | MTR_8g064910 | 25.072 | 347 | 201 | 13 | 24 | 360 | 55 | 352 | 2.97e-19 | 89.0 |
| MS.gene75481.t1 | MTR_4g111860 | 25.496 | 353 | 195 | 11 | 24 | 360 | 88 | 388 | 7.74e-19 | 87.8 |
| MS.gene75481.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 754 | 901 | 3.27e-16 | 80.9 |
| MS.gene75481.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 771 | 918 | 3.30e-16 | 80.9 |
| MS.gene75481.t1 | MTR_2g087710 | 27.234 | 235 | 141 | 8 | 137 | 364 | 652 | 863 | 1.22e-14 | 75.9 |
| MS.gene75481.t1 | MTR_7g106570 | 29.778 | 225 | 127 | 10 | 153 | 363 | 681 | 888 | 4.60e-14 | 73.9 |
| MS.gene75481.t1 | MTR_1g077980 | 29.091 | 165 | 96 | 5 | 208 | 366 | 765 | 914 | 4.47e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75481.t1 | AT2G22310 | 82.418 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 0.0 | 629 |
| MS.gene75481.t1 | AT4G39910 | 81.471 | 367 | 64 | 3 | 1 | 363 | 1 | 367 | 0.0 | 624 |
| MS.gene75481.t1 | AT2G22310 | 81.763 | 329 | 57 | 2 | 36 | 363 | 4 | 330 | 0.0 | 561 |
| MS.gene75481.t1 | AT2G22310 | 81.846 | 325 | 56 | 2 | 40 | 363 | 3 | 325 | 0.0 | 555 |
| MS.gene75481.t1 | AT4G24560 | 28.280 | 343 | 199 | 10 | 24 | 360 | 543 | 844 | 4.17e-36 | 140 |
| MS.gene75481.t1 | AT5G57990 | 29.070 | 344 | 193 | 13 | 24 | 360 | 108 | 407 | 7.49e-34 | 133 |
| MS.gene75481.t1 | AT3G14400 | 28.530 | 347 | 211 | 7 | 23 | 365 | 24 | 337 | 2.43e-32 | 128 |
| MS.gene75481.t1 | AT5G65450 | 30.063 | 316 | 181 | 10 | 23 | 330 | 348 | 631 | 1.99e-31 | 125 |
| MS.gene75481.t1 | AT5G65450 | 29.747 | 316 | 182 | 9 | 23 | 330 | 329 | 612 | 2.50e-31 | 125 |
| MS.gene75481.t1 | AT4G31670 | 28.213 | 319 | 191 | 10 | 24 | 334 | 169 | 457 | 1.15e-30 | 123 |
| MS.gene75481.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 5 | 293 | 2.99e-28 | 115 |
| MS.gene75481.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 175 | 463 | 3.55e-28 | 116 |
| MS.gene75481.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene75481.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene75481.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 443 | 745 | 7.30e-27 | 112 |
| MS.gene75481.t1 | AT4G17895 | 29.014 | 355 | 176 | 12 | 24 | 360 | 177 | 473 | 4.22e-25 | 107 |
| MS.gene75481.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene75481.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene75481.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 4.06e-24 | 104 |
| MS.gene75481.t1 | AT5G46740 | 28.696 | 345 | 196 | 10 | 24 | 360 | 164 | 466 | 1.83e-22 | 99.4 |
| MS.gene75481.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene75481.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene75481.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene75481.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene75481.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 1.61e-20 | 94.0 |
| MS.gene75481.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 197 | 520 | 1.94e-20 | 93.6 |
| MS.gene75481.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 2.12e-20 | 93.6 |
| MS.gene75481.t1 | AT5G10790 | 24.737 | 380 | 200 | 11 | 15 | 339 | 42 | 390 | 1.11e-18 | 87.4 |
| MS.gene75481.t1 | AT5G10790 | 24.474 | 380 | 201 | 11 | 15 | 339 | 171 | 519 | 2.89e-18 | 86.7 |
| MS.gene75481.t1 | AT5G46740 | 28.405 | 257 | 139 | 7 | 110 | 360 | 40 | 257 | 2.70e-16 | 80.5 |
| MS.gene75481.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 761 | 911 | 9.60e-14 | 73.2 |
| MS.gene75481.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 719 | 869 | 1.02e-13 | 73.2 |
| MS.gene75481.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene75481.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene75481.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene75481.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene75481.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene75481.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene75481.t1 | AT4G10570 | 31.325 | 166 | 93 | 6 | 204 | 363 | 745 | 895 | 1.07e-11 | 67.0 |
| MS.gene75481.t1 | AT1G32850 | 29.651 | 172 | 96 | 7 | 203 | 366 | 729 | 883 | 2.44e-11 | 65.9 |
Find 62 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAGTGCAGACATTCTT+TGG | 0.226632 | 3.3:+72685080 | MS.gene75481:CDS |
| TCACACCTGTCTTCCTCTTC+TGG | 0.239068 | 3.3:-72682956 | None:intergenic |
| GAACAATTGCTACAATATTA+TGG | 0.282416 | 3.3:+72681856 | MS.gene75481:CDS |
| AAATGAACTTGTTGACATTC+TGG | 0.297380 | 3.3:+72683835 | MS.gene75481:CDS |
| CAACCTCTGTACAAATCGTT+TGG | 0.322213 | 3.3:-72682985 | None:intergenic |
| CCAAAGTAATGTTCTCCTTC+AGG | 0.328815 | 3.3:-72681000 | None:intergenic |
| TACTTTGGCCTCGAGAATTT+CGG | 0.330275 | 3.3:+72681015 | MS.gene75481:CDS |
| CAAAACATAACCAGTGGTTA+TGG | 0.364423 | 3.3:-72685028 | None:intergenic |
| TTGCAAGCACCTTGTCTCAT+TGG | 0.376816 | 3.3:-72684203 | None:intergenic |
| TTGCAGTAGTTGTCCATGTT+GGG | 0.380146 | 3.3:+72684964 | MS.gene75481:CDS |
| CCATTAGCTAAACCACTCTT+TGG | 0.383199 | 3.3:-72683926 | None:intergenic |
| CTTCAGTGCAGACATTCTTT+GGG | 0.391927 | 3.3:+72685081 | MS.gene75481:CDS |
| TGTAGCAATTGTTCTCGAAA+TGG | 0.394146 | 3.3:-72681847 | None:intergenic |
| AACCTCTGTACAAATCGTTT+GGG | 0.398526 | 3.3:-72682984 | None:intergenic |
| AACGCGCTTATGGGTGGTTC+TGG | 0.402741 | 3.3:+72680943 | None:intergenic |
| TTGTCTTTCCCCTTGAACTC+AGG | 0.435602 | 3.3:+72684898 | MS.gene75481:CDS |
| CACACCTGTCTTCCTCTTCT+GGG | 0.437291 | 3.3:-72682955 | None:intergenic |
| TATCACTCAACCTGAGTTCA+AGG | 0.443968 | 3.3:-72684908 | None:intergenic |
| CCTGAAGGAGAACATTACTT+TGG | 0.451777 | 3.3:+72681000 | MS.gene75481:CDS |
| CCAAAGAGTGGTTTAGCTAA+TGG | 0.456689 | 3.3:+72683926 | MS.gene75481:CDS |
| CAAAGTAATGTTCTCCTTCA+GGG | 0.463000 | 3.3:-72680999 | None:intergenic |
| AAAAGAGCCTTTAGCTACTT+GGG | 0.466028 | 3.3:+72683955 | MS.gene75481:CDS |
| TTGTGCACCCAAGTAGCTAA+AGG | 0.471803 | 3.3:-72683962 | None:intergenic |
| TTTGCAGTAGTTGTCCATGT+TGG | 0.472175 | 3.3:+72684963 | MS.gene75481:CDS |
| ACAAATAGTTCAAGAACTCA+TGG | 0.473994 | 3.3:-72683811 | None:intergenic |
| CAGACATAATGTCCGTGGTT+GGG | 0.501159 | 3.3:-72684993 | None:intergenic |
| AAAGAGACCTCCACGTGTCT+TGG | 0.509264 | 3.3:+72684809 | MS.gene75481:CDS |
| TAGTTGTCCATGTTGGGAGT+GGG | 0.524445 | 3.3:+72684970 | MS.gene75481:CDS |
| TCTAAACTCGAGAAGGCTCT+CGG | 0.528934 | 3.3:+72680967 | MS.gene75481:CDS |
| AGTTCCCAGAAGAGGAAGAC+AGG | 0.531654 | 3.3:+72682951 | MS.gene75481:CDS |
| GTAGTTGTCCATGTTGGGAG+TGG | 0.545060 | 3.3:+72684969 | MS.gene75481:CDS |
| GGTTGGGCCCACTCCCAACA+TGG | 0.549398 | 3.3:-72684977 | None:intergenic |
| GTTTGCAAGAAGCTCAGAAG+AGG | 0.550711 | 3.3:+72684778 | MS.gene75481:intron |
| ATCACTCAACCTGAGTTCAA+GGG | 0.571357 | 3.3:-72684907 | None:intergenic |
| GCAGACATAATGTCCGTGGT+TGG | 0.577071 | 3.3:-72684994 | None:intergenic |
| CTCCCAAACGATTTGTACAG+AGG | 0.577523 | 3.3:+72682982 | MS.gene75481:CDS |
| TATAGATAAGTTCCCAGAAG+AGG | 0.577641 | 3.3:+72682943 | MS.gene75481:intron |
| CTTCCGTAGCTATATGCACC+AGG | 0.590612 | 3.3:+72683025 | MS.gene75481:CDS |
| TTCTGGTTCTAAACTCGAGA+AGG | 0.590698 | 3.3:+72680960 | MS.gene75481:CDS |
| CAAATAGTTCAAGAACTCAT+GGG | 0.594052 | 3.3:-72683810 | None:intergenic |
| GTTGGGAGTGGGCCCAACCA+CGG | 0.596385 | 3.3:+72684981 | MS.gene75481:CDS |
| AATGTGAAACTGTTACCGCT+AGG | 0.596426 | 3.3:+72684224 | MS.gene75481:CDS |
| CCATTCGCAATCTTCTCAGA+AGG | 0.599118 | 3.3:-72683902 | None:intergenic |
| CAATTCAACGCGCTTATGGG+TGG | 0.601033 | 3.3:+72680937 | None:intergenic |
| TTTAAGTACATGGAACAGCT+GGG | 0.603531 | 3.3:+72684849 | MS.gene75481:CDS |
| GTACCTGGTGCATATAGCTA+CGG | 0.605797 | 3.3:-72683028 | None:intergenic |
| ATTGCGAATGGACCAAAGAG+TGG | 0.607250 | 3.3:+72683914 | MS.gene75481:CDS |
| CGTAAAACAAAATGTAACCA+TGG | 0.617281 | 3.3:-72685133 | None:intergenic |
| CTCGGCGATAATTTCCCTGA+AGG | 0.623448 | 3.3:+72680985 | MS.gene75481:CDS |
| TCACTCAACCTGAGTTCAAG+GGG | 0.625682 | 3.3:-72684906 | None:intergenic |
| TTCAACAATAATACAGACCA+TGG | 0.626392 | 3.3:+72685116 | MS.gene75481:CDS |
| CCTTCTGAGAAGATTGCGAA+TGG | 0.627827 | 3.3:+72683902 | MS.gene75481:CDS |
| CGTCGTCAAAACATAACCAG+TGG | 0.628688 | 3.3:-72685034 | None:intergenic |
| ATGTGAAACTGTTACCGCTA+GGG | 0.633533 | 3.3:+72684225 | MS.gene75481:CDS |
| CAAGGCAGACATAATGTCCG+TGG | 0.637860 | 3.3:-72684998 | None:intergenic |
| TGACGACGAAACTGTCGAGG+TGG | 0.668810 | 3.3:+72685049 | MS.gene75481:CDS |
| TGAATGACCAAGACACGTGG+AGG | 0.677606 | 3.3:-72684816 | None:intergenic |
| AAGTATTGCCGAAATTCTCG+AGG | 0.684941 | 3.3:-72681023 | None:intergenic |
| GGTAAGACAGCTTCTTGTAG+CGG | 0.692354 | 3.3:-72684872 | None:intergenic |
| AGATGAATGACCAAGACACG+TGG | 0.706612 | 3.3:-72684819 | None:intergenic |
| GTTCAAGGGGAAAGACAACA+CGG | 0.707575 | 3.3:-72684893 | None:intergenic |
| GAATACTTACCAATGAGACA+AGG | 0.751910 | 3.3:+72684194 | MS.gene75481:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATTTATTATATGTATTT+GGG | + | chr3.3:72681595-72681614 | MS.gene75481:intron | 10.0% |
| !! | TACTATTTATTATATGTATT+TGG | + | chr3.3:72681594-72681613 | MS.gene75481:intron | 10.0% |
| !! | TTAAAAAAAAGTAGTAAAAT+AGG | - | chr3.3:72684412-72684431 | None:intergenic | 10.0% |
| !!! | AGATTTTTAAATTTTCATTT+CGG | + | chr3.3:72684140-72684159 | MS.gene75481:intron | 10.0% |
| !!! | ATTTTACTACTTTTTTTTAA+AGG | + | chr3.3:72684412-72684431 | MS.gene75481:intron | 10.0% |
| !!! | TTTTACTACTTTTTTTTAAA+GGG | + | chr3.3:72684413-72684432 | MS.gene75481:intron | 10.0% |
| !! | AGATATTATTAAAAAAGAGA+CGG | + | chr3.3:72682164-72682183 | MS.gene75481:intron | 15.0% |
| !! | TAAATCAGAATAATAAACAA+TGG | - | chr3.3:72682314-72682333 | None:intergenic | 15.0% |
| !! | TTATGATTATAGAATTTATC+TGG | + | chr3.3:72682026-72682045 | MS.gene75481:intron | 15.0% |
| !!! | GTTATTTTATTTTTGTTAGA+AGG | + | chr3.3:72683536-72683555 | MS.gene75481:intron | 15.0% |
| !!! | TCTCTTTTTTAATAATATCT+GGG | - | chr3.3:72682164-72682183 | None:intergenic | 15.0% |
| !!! | TTTACTCTAAAATAAACTTA+AGG | - | chr3.3:72681288-72681307 | None:intergenic | 15.0% |
| !!! | TTTTTATTACTTTTAGTAAG+AGG | + | chr3.3:72684436-72684455 | MS.gene75481:intron | 15.0% |
| !! | AAATACAATAGCTAACAAAA+AGG | - | chr3.3:72682536-72682555 | None:intergenic | 20.0% |
| !! | ATAGTAAGTTGTTAAAATAC+GGG | + | chr3.3:72681436-72681455 | MS.gene75481:intron | 20.0% |
| !! | ATCTATATCAAGAAATAACA+TGG | - | chr3.3:72682930-72682949 | None:intergenic | 20.0% |
| !! | ATGAAATGAATGTTTCAAAA+AGG | + | chr3.3:72681351-72681370 | MS.gene75481:intron | 20.0% |
| !! | ATTAACAACTTCACAATTTA+TGG | - | chr3.3:72684058-72684077 | None:intergenic | 20.0% |
| !! | GAGATTATGAATATATCAAA+AGG | - | chr3.3:72681524-72681543 | None:intergenic | 20.0% |
| !! | GATAGTAAGTTGTTAAAATA+CGG | + | chr3.3:72681435-72681454 | MS.gene75481:intron | 20.0% |
| !! | TGGTTAAAAAGTTACTAATT+TGG | - | chr3.3:72682118-72682137 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTACTAATTTGG+TGG | - | chr3.3:72682115-72682134 | None:intergenic | 20.0% |
| !! | TTGAAACATTCATTTCATAA+TGG | - | chr3.3:72681349-72681368 | None:intergenic | 20.0% |
| !! | TTGATATATTCATAATCTCA+AGG | + | chr3.3:72681525-72681544 | MS.gene75481:intron | 20.0% |
| !!! | ATTATTGTTTTGCTGAATTT+AGG | + | chr3.3:72681206-72681225 | MS.gene75481:intron | 20.0% |
| !!! | CTAATTTTTAGTCTTACTAT+TGG | + | chr3.3:72681664-72681683 | MS.gene75481:intron | 20.0% |
| !!! | CTCTTTTTTAATAATATCTG+GGG | - | chr3.3:72682163-72682182 | None:intergenic | 20.0% |
| !!! | GTCTCTTTTTTAATAATATC+TGG | - | chr3.3:72682165-72682184 | None:intergenic | 20.0% |
| !!! | TAAAAATATTTTCTGCTCAA+GGG | - | chr3.3:72683431-72683450 | None:intergenic | 20.0% |
| !!! | TATTTTCTAAATTCTGAATC+TGG | - | chr3.3:72681099-72681118 | None:intergenic | 20.0% |
| !!! | TCTTATTTTTGTGATCATTA+TGG | - | chr3.3:72684123-72684142 | None:intergenic | 20.0% |
| !!! | TTAAAAATATTTTCTGCTCA+AGG | - | chr3.3:72683432-72683451 | None:intergenic | 20.0% |
| !!! | TTAATCTTCTCATATTTTGT+AGG | + | chr3.3:72683784-72683803 | MS.gene75481:intron | 20.0% |
| !!! | TTTTTGTTAGCTATTGTATT+TGG | + | chr3.3:72682535-72682554 | MS.gene75481:intron | 20.0% |
| ! | AAACATTCATTTCATAATGG+TGG | - | chr3.3:72681346-72681365 | None:intergenic | 25.0% |
| ! | AAACCACAAATTTAGTTACA+AGG | - | chr3.3:72681791-72681810 | None:intergenic | 25.0% |
| ! | AAACTACACATTTGAAAAAC+AGG | - | chr3.3:72683688-72683707 | None:intergenic | 25.0% |
| ! | AACATTCATTTCATAATGGT+GGG | - | chr3.3:72681345-72681364 | None:intergenic | 25.0% |
| ! | AATTAAATCTAGTATGCAGT+GGG | + | chr3.3:72684083-72684102 | MS.gene75481:intron | 25.0% |
| ! | AGGAACATAAATGTTAACTA+AGG | - | chr3.3:72682516-72682535 | None:intergenic | 25.0% |
| ! | ATACCTTGTAACTAAATTTG+TGG | + | chr3.3:72681785-72681804 | MS.gene75481:intron | 25.0% |
| ! | ATGAATATATCAAAAGGTTC+CGG | - | chr3.3:72681518-72681537 | None:intergenic | 25.0% |
| ! | ATTATATTCATAACCCTTTC+AGG | - | chr3.3:72684677-72684696 | None:intergenic | 25.0% |
| ! | GAACAATTGCTACAATATTA+TGG | + | chr3.3:72681856-72681875 | MS.gene75481:CDS | 25.0% |
| ! | GATAAACTTAACCAATAGTA+GGG | - | chr3.3:72682454-72682473 | None:intergenic | 25.0% |
| ! | TAGATAATATTGAAGCCATT+TGG | - | chr3.3:72684490-72684509 | None:intergenic | 25.0% |
| ! | TCAAAAGAAAGATTGCATTT+CGG | - | chr3.3:72684753-72684772 | None:intergenic | 25.0% |
| ! | TGATAAACTTAACCAATAGT+AGG | - | chr3.3:72682455-72682474 | None:intergenic | 25.0% |
| ! | TTAGTCAATCAAATACGAAA+AGG | - | chr3.3:72681998-72682017 | None:intergenic | 25.0% |
| ! | TTCGTCAAACAATGAATATT+AGG | + | chr3.3:72681232-72681251 | MS.gene75481:intron | 25.0% |
| !! | AAAATTAGTTGGTCTAAGTA+TGG | - | chr3.3:72682138-72682157 | None:intergenic | 25.0% |
| !! | AAATGATGCCATTCTAATTT+TGG | - | chr3.3:72682231-72682250 | None:intergenic | 25.0% |
| !! | ACTAGTAATATGATGTTTTC+TGG | + | chr3.3:72684571-72684590 | MS.gene75481:intron | 25.0% |
| !! | ATGTATGTACTTTGTTTATG+AGG | + | chr3.3:72681620-72681639 | MS.gene75481:intron | 25.0% |
| !! | CTAGTAATATGATGTTTTCT+GGG | + | chr3.3:72684572-72684591 | MS.gene75481:intron | 25.0% |
| !! | TAACTAAGGAAACAGATTTT+AGG | - | chr3.3:72682502-72682521 | None:intergenic | 25.0% |
| !! | TACTATTGGTTAAGTTTATC+AGG | + | chr3.3:72682454-72682473 | MS.gene75481:intron | 25.0% |
| !!! | GTTTTAAATTGCTTTGATCA+GGG | + | chr3.3:72684172-72684191 | MS.gene75481:intron | 25.0% |
| !!! | TGTCTTGTTTATTTCTTTCA+TGG | + | chr3.3:72682893-72682912 | MS.gene75481:intron | 25.0% |
| !!! | TGTTTTAAATTGCTTTGATC+AGG | + | chr3.3:72684171-72684190 | MS.gene75481:intron | 25.0% |
| !!! | TTTGTAGGTCACTTTTAAAT+AGG | - | chr3.3:72681552-72681571 | None:intergenic | 25.0% |
| !!! | TTTTAGTCTTACTATTGGAA+AGG | + | chr3.3:72681669-72681688 | MS.gene75481:intron | 25.0% |
| AAAAAACATTTCATCCCTAG+CGG | - | chr3.3:72684242-72684261 | None:intergenic | 30.0% | |
| AAAAGTGACCTACAAAATGA+GGG | + | chr3.3:72681556-72681575 | MS.gene75481:intron | 30.0% | |
| AAATTCCCTTAGTAACAACT+TGG | - | chr3.3:72682427-72682446 | None:intergenic | 30.0% | |
| AACACATGTAGAATGAATAG+TGG | - | chr3.3:72682386-72682405 | None:intergenic | 30.0% | |
| ACAAAATGAGGGACTAATAT+GGG | + | chr3.3:72681567-72681586 | MS.gene75481:intron | 30.0% | |
| ACAAATAGTTCAAGAACTCA+TGG | - | chr3.3:72683814-72683833 | None:intergenic | 30.0% | |
| ACACATGTAGAATGAATAGT+GGG | - | chr3.3:72682385-72682404 | None:intergenic | 30.0% | |
| ATCACTTTCTACAAATGTTC+CGG | - | chr3.3:72683477-72683496 | None:intergenic | 30.0% | |
| ATCATTTGCAAATTGTAGCT+AGG | + | chr3.3:72682244-72682263 | MS.gene75481:intron | 30.0% | |
| ATTCTATGCATTACTCTTGA+AGG | - | chr3.3:72683120-72683139 | None:intergenic | 30.0% | |
| CAAATAGTTCAAGAACTCAT+GGG | - | chr3.3:72683813-72683832 | None:intergenic | 30.0% | |
| CAATGATCTACCAATTGAAA+TGG | - | chr3.3:72683279-72683298 | None:intergenic | 30.0% | |
| CAATTAAATCTAGTATGCAG+TGG | + | chr3.3:72684082-72684101 | MS.gene75481:intron | 30.0% | |
| CACATGTTATTGATGTTACA+TGG | + | chr3.3:72682074-72682093 | MS.gene75481:intron | 30.0% | |
| CAGAATAATAAACAATGGCA+TGG | - | chr3.3:72682309-72682328 | None:intergenic | 30.0% | |
| CATTTCAATTGGTAGATCAT+TGG | + | chr3.3:72683277-72683296 | MS.gene75481:intron | 30.0% | |
| CGTAAAACAAAATGTAACCA+TGG | - | chr3.3:72685136-72685155 | None:intergenic | 30.0% | |
| GATTATAGAATTTATCTGGC+TGG | + | chr3.3:72682030-72682049 | MS.gene75481:intron | 30.0% | |
| GCATATTCAGAATATCTAGA+CGG | + | chr3.3:72681729-72681748 | MS.gene75481:intron | 30.0% | |
| GTTTGTTTGACATTAGCATT+TGG | + | chr3.3:72681259-72681278 | MS.gene75481:intron | 30.0% | |
| TAAAAGTGACCTACAAAATG+AGG | + | chr3.3:72681555-72681574 | MS.gene75481:intron | 30.0% | |
| TAAACCACTTACCATCAATT+AGG | - | chr3.3:72681463-72681482 | None:intergenic | 30.0% | |
| TACAAAATGAGGGACTAATA+TGG | + | chr3.3:72681566-72681585 | MS.gene75481:intron | 30.0% | |
| TAGCTTATAGTTGAACTTGA+TGG | + | chr3.3:72683354-72683373 | MS.gene75481:intron | 30.0% | |
| TAGGTTAACAATCCATTGAT+TGG | + | chr3.3:72684632-72684651 | MS.gene75481:intron | 30.0% | |
| TATTGATGTTACATGGATGA+AGG | + | chr3.3:72682081-72682100 | MS.gene75481:intron | 30.0% | |
| TGAATGTGTTATGGAAACAA+AGG | - | chr3.3:72683580-72683599 | None:intergenic | 30.0% | |
| TGAGAAAAATTGCCAATCAA+TGG | - | chr3.3:72684647-72684666 | None:intergenic | 30.0% | |
| TTCAACAATAATACAGACCA+TGG | + | chr3.3:72685116-72685135 | MS.gene75481:CDS | 30.0% | |
| TTCTACAAGGGAAACAAAAA+AGG | - | chr3.3:72682563-72682582 | None:intergenic | 30.0% | |
| TTGTAAAAAACCATAACCAC+TGG | + | chr3.3:72685018-72685037 | MS.gene75481:CDS | 30.0% | |
| ! | AAGTTACTAATTTGGTGGAT+TGG | - | chr3.3:72682110-72682129 | None:intergenic | 30.0% |
| ! | ATATTAGTCCCTCATTTTGT+AGG | - | chr3.3:72681567-72681586 | None:intergenic | 30.0% |
| ! | GTGTTTTACACTATCAATGT+GGG | - | chr3.3:72682341-72682360 | None:intergenic | 30.0% |
| ! | TATAGTTGAACTTGATGGTT+AGG | + | chr3.3:72683359-72683378 | MS.gene75481:intron | 30.0% |
| ! | TATCTGGGGTAAAAATTAGT+TGG | - | chr3.3:72682149-72682168 | None:intergenic | 30.0% |
| ! | TATGATGTTTTCTGGGTATA+TGG | + | chr3.3:72684579-72684598 | MS.gene75481:intron | 30.0% |
| ! | TTCTCATTGATTACCTGAAA+GGG | + | chr3.3:72684661-72684680 | MS.gene75481:intron | 30.0% |
| ! | TTTCTCATTGATTACCTGAA+AGG | + | chr3.3:72684660-72684679 | MS.gene75481:intron | 30.0% |
| !! | AAATGAACTTGTTGACATTC+TGG | + | chr3.3:72683835-72683854 | MS.gene75481:CDS | 30.0% |
| !! | CTAAAAACAGTTTTGCTATC+GGG | - | chr3.3:72683337-72683356 | None:intergenic | 30.0% |
| !! | GCTAAAAACAGTTTTGCTAT+CGG | - | chr3.3:72683338-72683357 | None:intergenic | 30.0% |
| !! | TCTTAAGCGTTTTAAGTACA+TGG | + | chr3.3:72684839-72684858 | MS.gene75481:CDS | 30.0% |
| !! | TTTTTGTTTCCCTTGTAGAA+TGG | + | chr3.3:72682563-72682582 | MS.gene75481:intron | 30.0% |
| !!! | AAATTAGTTTTGCTACTCGT+TGG | - | chr3.3:72681651-72681670 | None:intergenic | 30.0% |
| !!! | AGTGGTTATGGTTTTTTACA+AGG | - | chr3.3:72685019-72685038 | None:intergenic | 30.0% |
| !!! | GTTTTTTCTTCTCATTCTAC+AGG | + | chr3.3:72681807-72681826 | MS.gene75481:intron | 30.0% |
| AAAAAGAGCCTTTAGCTACT+TGG | + | chr3.3:72683954-72683973 | MS.gene75481:CDS | 35.0% | |
| AAAAGAGCCTTTAGCTACTT+GGG | + | chr3.3:72683955-72683974 | MS.gene75481:CDS | 35.0% | |
| AAAATACGGGACCTAATTGA+TGG | + | chr3.3:72681449-72681468 | MS.gene75481:intron | 35.0% | |
| AAACCACCAAATTCTTTGCA+GGG | + | chr3.3:72681305-72681324 | MS.gene75481:intron | 35.0% | |
| AACCTCTGTACAAATCGTTT+GGG | - | chr3.3:72682987-72683006 | None:intergenic | 35.0% | |
| AATAAACAATGGCATGGAGA+TGG | - | chr3.3:72682303-72682322 | None:intergenic | 35.0% | |
| AGTAACAACTTGGAGAGAAA+AGG | - | chr3.3:72682417-72682436 | None:intergenic | 35.0% | |
| ATACAATGATATGAGTCGCT+TGG | - | chr3.3:72683309-72683328 | None:intergenic | 35.0% | |
| CAAAACATAACCAGTGGTTA+TGG | - | chr3.3:72685031-72685050 | None:intergenic | 35.0% | |
| CAAAATGAGGGACTAATATG+GGG | + | chr3.3:72681568-72681587 | MS.gene75481:intron | 35.0% | |
| CAAAGTAATGTTCTCCTTCA+GGG | - | chr3.3:72681002-72681021 | None:intergenic | 35.0% | |
| CAAAGTTGCACCATTTCAAT+TGG | + | chr3.3:72683266-72683285 | MS.gene75481:intron | 35.0% | |
| CATTCAGTGAGGTTGAATAA+CGG | + | chr3.3:72683594-72683613 | MS.gene75481:intron | 35.0% | |
| CTTGACAGTTTAATAGAGTC+CGG | + | chr3.3:72681496-72681515 | MS.gene75481:intron | 35.0% | |
| GAATACTTACCAATGAGACA+AGG | + | chr3.3:72684194-72684213 | MS.gene75481:CDS | 35.0% | |
| GAGGTATAAGAAATTGGAAG+AGG | + | chr3.3:72682754-72682773 | MS.gene75481:intron | 35.0% | |
| GATCTTCTGATAGCATATGA+AGG | + | chr3.3:72681404-72681423 | MS.gene75481:intron | 35.0% | |
| GGAATTTCATACCCTACTAT+TGG | + | chr3.3:72682440-72682459 | MS.gene75481:intron | 35.0% | |
| GTGACCATCCAAAATTAGAA+TGG | + | chr3.3:72682220-72682239 | MS.gene75481:intron | 35.0% | |
| TAAACCACCAAATTCTTTGC+AGG | + | chr3.3:72681304-72681323 | MS.gene75481:intron | 35.0% | |
| TACAATGATATGAGTCGCTT+GGG | - | chr3.3:72683308-72683327 | None:intergenic | 35.0% | |
| TATAGATAAGTTCCCAGAAG+AGG | + | chr3.3:72682943-72682962 | MS.gene75481:intron | 35.0% | |
| TCGGTTGAGGTATAAGAAAT+TGG | + | chr3.3:72682748-72682767 | MS.gene75481:intron | 35.0% | |
| TCTCTCCAAGTTGTTACTAA+GGG | + | chr3.3:72682419-72682438 | MS.gene75481:intron | 35.0% | |
| TGATGAGCATGAATCTTGAT+AGG | + | chr3.3:72684613-72684632 | MS.gene75481:intron | 35.0% | |
| TGTAGCAATTGTTCTCGAAA+TGG | - | chr3.3:72681850-72681869 | None:intergenic | 35.0% | |
| TGTCAGTTTGAAAATGTACC+TGG | - | chr3.3:72683046-72683065 | None:intergenic | 35.0% | |
| TTCTCTCCAAGTTGTTACTA+AGG | + | chr3.3:72682418-72682437 | MS.gene75481:intron | 35.0% | |
| TTGTACATGTGTACAGTGTT+TGG | + | chr3.3:72683146-72683165 | MS.gene75481:intron | 35.0% | |
| TTTAAGTACATGGAACAGCT+GGG | + | chr3.3:72684849-72684868 | MS.gene75481:CDS | 35.0% | |
| TTTCCATAACACATTCAGTG+AGG | + | chr3.3:72683583-72683602 | MS.gene75481:intron | 35.0% | |
| ! | CTAATTTTGGATGGTCACAA+AGG | - | chr3.3:72682218-72682237 | None:intergenic | 35.0% |
| ! | CTTAGCTGAACTATTTTCAC+AGG | + | chr3.3:72681924-72681943 | MS.gene75481:CDS | 35.0% |
| ! | GACATGACTAGTTACTTGTA+GGG | + | chr3.3:72682476-72682495 | MS.gene75481:intron | 35.0% |
| ! | GATGCCATTCTAATTTTGGA+TGG | - | chr3.3:72682227-72682246 | None:intergenic | 35.0% |
| ! | GGTGTTTTACACTATCAATG+TGG | - | chr3.3:72682342-72682361 | None:intergenic | 35.0% |
| ! | TCAACCGAAAAGCACAAAAA+GGG | - | chr3.3:72682736-72682755 | None:intergenic | 35.0% |
| ! | TGTACTTTGTTTATGAGGTC+AGG | + | chr3.3:72681625-72681644 | MS.gene75481:intron | 35.0% |
| ! | TTCTCCCTTTTTGTGCTTTT+CGG | + | chr3.3:72682729-72682748 | MS.gene75481:intron | 35.0% |
| !! | TTTTAAGTACATGGAACAGC+TGG | + | chr3.3:72684848-72684867 | MS.gene75481:CDS | 35.0% |
| !!! | AAATTGGAAGAGGTGCTTTT+CGG | + | chr3.3:72682764-72682783 | MS.gene75481:intron | 35.0% |
| AAAGATCTCTCTACCTGAAC+CGG | + | chr3.3:72683455-72683474 | MS.gene75481:intron | 40.0% | |
| AATGTGAAACTGTTACCGCT+AGG | + | chr3.3:72684224-72684243 | MS.gene75481:CDS | 40.0% | |
| ACGTAGATTGCATTTCTGAC+AGG | - | chr3.3:72683518-72683537 | None:intergenic | 40.0% | |
| ATCACTCAACCTGAGTTCAA+GGG | - | chr3.3:72684910-72684929 | None:intergenic | 40.0% | |
| ATCTTTCTTGCAGCAAAGCT+TGG | + | chr3.3:72684027-72684046 | MS.gene75481:intron | 40.0% | |
| ATGTGAAACTGTTACCGCTA+GGG | + | chr3.3:72684225-72684244 | MS.gene75481:CDS | 40.0% | |
| CAACCTCACTGAATGTGTTA+TGG | - | chr3.3:72683589-72683608 | None:intergenic | 40.0% | |
| CAACCTCTGTACAAATCGTT+TGG | - | chr3.3:72682988-72683007 | None:intergenic | 40.0% | |
| CCAAAGAGTGGTTTAGCTAA+TGG | + | chr3.3:72683926-72683945 | MS.gene75481:CDS | 40.0% | |
| CCAAAGTAATGTTCTCCTTC+AGG | - | chr3.3:72681003-72681022 | None:intergenic | 40.0% | |
| CCATTAGCTAAACCACTCTT+TGG | - | chr3.3:72683929-72683948 | None:intergenic | 40.0% | |
| CCTGAAGGAGAACATTACTT+TGG | + | chr3.3:72681000-72681019 | MS.gene75481:CDS | 40.0% | |
| CCTGCAAATCCATTCTACAA+GGG | - | chr3.3:72682575-72682594 | None:intergenic | 40.0% | |
| CTTCAGTGCAGACATTCTTT+GGG | + | chr3.3:72685081-72685100 | MS.gene75481:CDS | 40.0% | |
| GATAGTGTAAAACACCACAC+TGG | + | chr3.3:72682346-72682365 | MS.gene75481:intron | 40.0% | |
| GGCTACGTTGTTTGTGAATA+TGG | + | chr3.3:72682051-72682070 | MS.gene75481:intron | 40.0% | |
| GTCTAGAGAACTGGATCTAA+AGG | - | chr3.3:72682281-72682300 | None:intergenic | 40.0% | |
| TAAAACACCACACTGGAACT+TGG | + | chr3.3:72682353-72682372 | MS.gene75481:intron | 40.0% | |
| TACTTTGGCCTCGAGAATTT+CGG | + | chr3.3:72681015-72681034 | MS.gene75481:CDS | 40.0% | |
| TATCACTCAACCTGAGTTCA+AGG | - | chr3.3:72684911-72684930 | None:intergenic | 40.0% | |
| TGATGAGCAAAGATGCCAAA+TGG | + | chr3.3:72684472-72684491 | MS.gene75481:intron | 40.0% | |
| TTCTACAAATGTTCCGGTTC+AGG | - | chr3.3:72683471-72683490 | None:intergenic | 40.0% | |
| TTGCAGTAGTTGTCCATGTT+GGG | + | chr3.3:72684964-72684983 | MS.gene75481:CDS | 40.0% | |
| TTGGGTGCACAAAAACTTTC+AGG | + | chr3.3:72683973-72683992 | MS.gene75481:CDS | 40.0% | |
| TTTGCAGTAGTTGTCCATGT+TGG | + | chr3.3:72684963-72684982 | MS.gene75481:CDS | 40.0% | |
| ! | AAGTATTGCCGAAATTCTCG+AGG | - | chr3.3:72681026-72681045 | None:intergenic | 40.0% |
| ! | CTCAACCGAAAAGCACAAAA+AGG | - | chr3.3:72682737-72682756 | None:intergenic | 40.0% |
| ! | CTTTTTGTGCTTTTCGGTTG+AGG | + | chr3.3:72682735-72682754 | MS.gene75481:intron | 40.0% |
| ! | GAACTTGATGGTTAGGATGA+TGG | + | chr3.3:72683366-72683385 | MS.gene75481:intron | 40.0% |
| ! | GGACATGACTAGTTACTTGT+AGG | + | chr3.3:72682475-72682494 | MS.gene75481:intron | 40.0% |
| ! | TTATTGCAACAGCGTTTTGC+AGG | + | chr3.3:72681047-72681066 | MS.gene75481:CDS | 40.0% |
| ! | TTGTAGAATGGATTTGCAGG+CGG | + | chr3.3:72682575-72682594 | MS.gene75481:intron | 40.0% |
| !! | TTCTGGTTCTAAACTCGAGA+AGG | + | chr3.3:72680960-72680979 | MS.gene75481:CDS | 40.0% |
| !!! | CTTGATCGTCTTTTTCAGCA+CGG | - | chr3.3:72683871-72683890 | None:intergenic | 40.0% |
| !!! | TTGATCGTCTTTTTCAGCAC+GGG | - | chr3.3:72683870-72683889 | None:intergenic | 40.0% |
| AGATGAATGACCAAGACACG+TGG | - | chr3.3:72684822-72684841 | None:intergenic | 45.0% | |
| AGCTGAGAAGCAACTAAGCA+GGG | - | chr3.3:72683207-72683226 | None:intergenic | 45.0% | |
| ATGGAGATGGTCTAGAGAAC+TGG | - | chr3.3:72682290-72682309 | None:intergenic | 45.0% | |
| ATTGCGAATGGACCAAAGAG+TGG | + | chr3.3:72683914-72683933 | MS.gene75481:CDS | 45.0% | |
| CAAGATTCATGCTCATCACG+TGG | - | chr3.3:72684611-72684630 | None:intergenic | 45.0% | |
| CAGACATAATGTCCGTGGTT+GGG | - | chr3.3:72684996-72685015 | None:intergenic | 45.0% | |
| CCATTCGCAATCTTCTCAGA+AGG | - | chr3.3:72683905-72683924 | None:intergenic | 45.0% | |
| CCTCATATGCAAGCAATGTC+AGG | - | chr3.3:72681975-72681994 | None:intergenic | 45.0% | |
| CCTGACATTGCTTGCATATG+AGG | + | chr3.3:72681972-72681991 | MS.gene75481:intron | 45.0% | |
| CGTCGTCAAAACATAACCAG+TGG | - | chr3.3:72685037-72685056 | None:intergenic | 45.0% | |
| CGTGCTGAAAAAGACGATCA+AGG | + | chr3.3:72683869-72683888 | MS.gene75481:CDS | 45.0% | |
| CTCCCAAACGATTTGTACAG+AGG | + | chr3.3:72682982-72683001 | MS.gene75481:CDS | 45.0% | |
| GCCTGCAAATCCATTCTACA+AGG | - | chr3.3:72682576-72682595 | None:intergenic | 45.0% | |
| GCTTCAGTGCAGACATTCTT+TGG | + | chr3.3:72685080-72685099 | MS.gene75481:CDS | 45.0% | |
| GGTAAGACAGCTTCTTGTAG+CGG | - | chr3.3:72684875-72684894 | None:intergenic | 45.0% | |
| GTACCTGGTGCATATAGCTA+CGG | - | chr3.3:72683031-72683050 | None:intergenic | 45.0% | |
| GTTCAAGGGGAAAGACAACA+CGG | - | chr3.3:72684896-72684915 | None:intergenic | 45.0% | |
| GTTTGCAAGAAGCTCAGAAG+AGG | + | chr3.3:72684778-72684797 | MS.gene75481:intron | 45.0% | |
| TAGTTGTCCATGTTGGGAGT+GGG | + | chr3.3:72684970-72684989 | MS.gene75481:CDS | 45.0% | |
| TCACTCAACCTGAGTTCAAG+GGG | - | chr3.3:72684909-72684928 | None:intergenic | 45.0% | |
| TCTAAACTCGAGAAGGCTCT+CGG | + | chr3.3:72680967-72680986 | MS.gene75481:CDS | 45.0% | |
| TGAGTTACCTTCACAGGTGA+AGG | + | chr3.3:72683657-72683676 | MS.gene75481:intron | 45.0% | |
| TTGCAAGCACCTTGTCTCAT+TGG | - | chr3.3:72684206-72684225 | None:intergenic | 45.0% | |
| TTGTCTTTCCCCTTGAACTC+AGG | + | chr3.3:72684898-72684917 | MS.gene75481:CDS | 45.0% | |
| TTGTGCACCCAAGTAGCTAA+AGG | - | chr3.3:72683965-72683984 | None:intergenic | 45.0% | |
| ! | AGGATGATGGTTCACTAGCT+GGG | + | chr3.3:72683379-72683398 | MS.gene75481:intron | 45.0% |
| ! | CCCTTGTAGAATGGATTTGC+AGG | + | chr3.3:72682572-72682591 | MS.gene75481:intron | 45.0% |
| ! | CCTTCTGAGAAGATTGCGAA+TGG | + | chr3.3:72683902-72683921 | MS.gene75481:CDS | 45.0% |
| ! | GGGACCTAATTGATGGTAAG+TGG | + | chr3.3:72681456-72681475 | MS.gene75481:intron | 45.0% |
| ! | TAGGATGATGGTTCACTAGC+TGG | + | chr3.3:72683378-72683397 | MS.gene75481:intron | 45.0% |
| ! | TTTTGACGACGAAACTGTCG+AGG | + | chr3.3:72685046-72685065 | MS.gene75481:CDS | 45.0% |
| !! | TTTTCTGTGACAAGTGCTGC+AGG | + | chr3.3:72684353-72684372 | MS.gene75481:CDS | 45.0% |
| AAAGAGACCTCCACGTGTCT+TGG | + | chr3.3:72684809-72684828 | MS.gene75481:CDS | 50.0% | |
| AGGCCCTGCAAAGAATTTGG+TGG | - | chr3.3:72681311-72681330 | None:intergenic | 50.0% | |
| AGTTCCCAGAAGAGGAAGAC+AGG | + | chr3.3:72682951-72682970 | MS.gene75481:CDS | 50.0% | |
| ATGATGGTTCACTAGCTGGG+CGG | + | chr3.3:72683382-72683401 | MS.gene75481:intron | 50.0% | |
| CAAGGCAGACATAATGTCCG+TGG | - | chr3.3:72685001-72685020 | None:intergenic | 50.0% | |
| CACACCTGTCTTCCTCTTCT+GGG | - | chr3.3:72682958-72682977 | None:intergenic | 50.0% | |
| CAGCTGAGAAGCAACTAAGC+AGG | - | chr3.3:72683208-72683227 | None:intergenic | 50.0% | |
| CTCGGCGATAATTTCCCTGA+AGG | + | chr3.3:72680985-72681004 | MS.gene75481:CDS | 50.0% | |
| CTCGTCTGAGTTACCTTCAC+AGG | + | chr3.3:72683651-72683670 | MS.gene75481:intron | 50.0% | |
| CTGTGAAGGTAACTCAGACG+AGG | - | chr3.3:72683653-72683672 | None:intergenic | 50.0% | |
| CTTCCGTAGCTATATGCACC+AGG | + | chr3.3:72683025-72683044 | MS.gene75481:CDS | 50.0% | |
| GAAGGTAACTCAGACGAGGA+AGG | - | chr3.3:72683649-72683668 | None:intergenic | 50.0% | |
| GAGAGGCCCTGCAAAGAATT+TGG | - | chr3.3:72681314-72681333 | None:intergenic | 50.0% | |
| GCAGACATAATGTCCGTGGT+TGG | - | chr3.3:72684997-72685016 | None:intergenic | 50.0% | |
| GGAATGACCTTCACCTGTGA+AGG | - | chr3.3:72683667-72683686 | None:intergenic | 50.0% | |
| GTAGTTGTCCATGTTGGGAG+TGG | + | chr3.3:72684969-72684988 | MS.gene75481:CDS | 50.0% | |
| GTGTTTGCCAAGTTCCAGTG+TGG | - | chr3.3:72682363-72682382 | None:intergenic | 50.0% | |
| TCACACCTGTCTTCCTCTTC+TGG | - | chr3.3:72682959-72682978 | None:intergenic | 50.0% | |
| TGAATGACCAAGACACGTGG+AGG | - | chr3.3:72684819-72684838 | None:intergenic | 50.0% | |
| ! | AATGGTGGGACCTGTTTGAG+AGG | - | chr3.3:72681331-72681350 | None:intergenic | 50.0% |
| ! | TAGAATGGATTTGCAGGCGG+TGG | + | chr3.3:72682578-72682597 | MS.gene75481:intron | 50.0% |
| CTAGCTGGGCGGTCAATAGA+AGG | + | chr3.3:72683393-72683412 | MS.gene75481:intron | 55.0% | |
| CTTTGCAGGGCCTCTCAAAC+AGG | + | chr3.3:72681318-72681337 | MS.gene75481:intron | 55.0% | |
| TGACGACGAAACTGTCGAGG+TGG | + | chr3.3:72685049-72685068 | MS.gene75481:CDS | 55.0% | |
| GGTTGGGCCCACTCCCAACA+TGG | - | chr3.3:72684980-72684999 | None:intergenic | 65.0% | |
| GTTGGGAGTGGGCCCAACCA+CGG | + | chr3.3:72684981-72685000 | MS.gene75481:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 72680952 | 72685175 | 72680952 | ID=MS.gene75481 |
| chr3.3 | mRNA | 72680952 | 72685175 | 72680952 | ID=MS.gene75481.t1;Parent=MS.gene75481 |
| chr3.3 | exon | 72680952 | 72681068 | 72680952 | ID=MS.gene75481.t1.exon1;Parent=MS.gene75481.t1 |
| chr3.3 | CDS | 72680952 | 72681068 | 72680952 | ID=cds.MS.gene75481.t1;Parent=MS.gene75481.t1 |
| chr3.3 | exon | 72681829 | 72681945 | 72681829 | ID=MS.gene75481.t1.exon2;Parent=MS.gene75481.t1 |
| chr3.3 | CDS | 72681829 | 72681945 | 72681829 | ID=cds.MS.gene75481.t1;Parent=MS.gene75481.t1 |
| chr3.3 | exon | 72682948 | 72683046 | 72682948 | ID=MS.gene75481.t1.exon3;Parent=MS.gene75481.t1 |
| chr3.3 | CDS | 72682948 | 72683046 | 72682948 | ID=cds.MS.gene75481.t1;Parent=MS.gene75481.t1 |
| chr3.3 | exon | 72683806 | 72683994 | 72683806 | ID=MS.gene75481.t1.exon4;Parent=MS.gene75481.t1 |
| chr3.3 | CDS | 72683806 | 72683994 | 72683806 | ID=cds.MS.gene75481.t1;Parent=MS.gene75481.t1 |
| chr3.3 | exon | 72684193 | 72684374 | 72684193 | ID=MS.gene75481.t1.exon5;Parent=MS.gene75481.t1 |
| chr3.3 | CDS | 72684193 | 72684374 | 72684193 | ID=cds.MS.gene75481.t1;Parent=MS.gene75481.t1 |
| chr3.3 | exon | 72684779 | 72685175 | 72684779 | ID=MS.gene75481.t1.exon6;Parent=MS.gene75481.t1 |
| chr3.3 | CDS | 72684779 | 72685175 | 72684779 | ID=cds.MS.gene75481.t1;Parent=MS.gene75481.t1 |
| Gene Sequence |
| Protein sequence |
