Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77503.t1 | XP_024633668.1 | 88.6 | 185 | 19 | 1 | 1 | 183 | 1 | 185 | 3.90E-71 | 277.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77503.t1 | O64864 | 44.1 | 118 | 64 | 1 | 7 | 122 | 12 | 129 | 3.2e-26 | 119.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77503.t1 | A0A396IUN5 | 88.6 | 185 | 19 | 1 | 1 | 183 | 1 | 185 | 2.8e-71 | 277.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene77503 | 0.827644 | 1.40E-54 | -1.69E-46 |
| MS.gene052209 | MS.gene77503 | 0.809129 | 2.20E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene77503 | 0.809888 | 1.51E-50 | -1.69E-46 |
| MS.gene05652 | MS.gene77503 | 0.803114 | 4.07E-49 | -1.69E-46 |
| MS.gene057669 | MS.gene77503 | 0.840553 | 8.11E-58 | -1.69E-46 |
| MS.gene05926 | MS.gene77503 | 0.824069 | 9.86E-54 | -1.69E-46 |
| MS.gene059616 | MS.gene77503 | 0.816156 | 6.40E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene77503 | MS.gene59892 | PPI |
| MS.gene77503 | MS.gene016280 | PPI |
| MS.gene77503 | MS.gene066915 | PPI |
| MS.gene77503 | MS.gene067247 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77503.t1 | MTR_3g083760 | 82.673 | 202 | 16 | 1 | 1 | 183 | 1 | 202 | 1.18e-94 | 273 |
| MS.gene77503.t1 | MTR_3g083760 | 87.413 | 143 | 16 | 1 | 1 | 141 | 1 | 143 | 6.48e-81 | 236 |
| MS.gene77503.t1 | MTR_8g085560 | 50.829 | 181 | 83 | 3 | 9 | 183 | 14 | 194 | 5.45e-66 | 201 |
| MS.gene77503.t1 | MTR_7g014880 | 42.222 | 180 | 93 | 3 | 8 | 176 | 12 | 191 | 3.99e-41 | 137 |
| MS.gene77503.t1 | MTR_8g446830 | 39.487 | 195 | 105 | 6 | 1 | 182 | 1 | 195 | 1.05e-36 | 126 |
| MS.gene77503.t1 | MTR_1g103450 | 31.333 | 150 | 79 | 4 | 12 | 161 | 15 | 140 | 7.10e-13 | 63.5 |
| MS.gene77503.t1 | MTR_1g103490 | 36.667 | 90 | 55 | 2 | 12 | 101 | 10 | 97 | 2.34e-12 | 62.0 |
| MS.gene77503.t1 | MTR_1g103470 | 39.189 | 74 | 42 | 2 | 28 | 101 | 25 | 95 | 1.66e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77503.t1 | AT1G55260 | 43.258 | 178 | 93 | 4 | 8 | 181 | 53 | 226 | 6.91e-44 | 145 |
| MS.gene77503.t1 | AT1G55260 | 43.258 | 178 | 90 | 5 | 8 | 181 | 53 | 223 | 2.21e-43 | 144 |
| MS.gene77503.t1 | AT2G44300 | 39.796 | 196 | 96 | 5 | 7 | 183 | 11 | 203 | 1.38e-40 | 136 |
| MS.gene77503.t1 | AT2G44290 | 38.579 | 197 | 96 | 4 | 9 | 183 | 11 | 204 | 1.60e-40 | 136 |
| MS.gene77503.t1 | AT3G58550 | 38.926 | 149 | 84 | 4 | 4 | 145 | 9 | 157 | 6.51e-30 | 108 |
| MS.gene77503.t1 | AT1G03103 | 31.915 | 94 | 64 | 0 | 8 | 101 | 2 | 95 | 1.91e-14 | 68.2 |
| MS.gene77503.t1 | AT5G09370 | 37.736 | 106 | 61 | 2 | 24 | 127 | 21 | 123 | 3.16e-14 | 66.6 |
| MS.gene77503.t1 | AT5G09370 | 37.600 | 125 | 64 | 5 | 24 | 138 | 21 | 141 | 3.74e-14 | 67.0 |
| MS.gene77503.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene77503.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene77503.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene77503.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene77503.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene77503.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene77503.t1 | AT5G09370 | 39.175 | 97 | 54 | 2 | 24 | 118 | 21 | 114 | 6.05e-14 | 66.6 |
| MS.gene77503.t1 | AT1G73890 | 39.189 | 74 | 45 | 0 | 31 | 104 | 30 | 103 | 7.41e-14 | 67.0 |
| MS.gene77503.t1 | AT3G22600 | 28.188 | 149 | 95 | 5 | 10 | 150 | 6 | 150 | 2.51e-12 | 62.4 |
| MS.gene77503.t1 | AT4G14815 | 30.000 | 90 | 62 | 1 | 12 | 101 | 7 | 95 | 4.42e-11 | 58.9 |
Find 51 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAATTACCGCTGGAAAT+AGG | 0.158824 | 3.2:+72340472 | None:intergenic |
| TCTTATCAAGGACTTGTTTA+AGG | 0.173161 | 3.2:+72341168 | None:intergenic |
| ACCTTAGCTTCAGGGGATTT+AGG | 0.238114 | 3.2:+72340538 | None:intergenic |
| AATAATTACCGCTGGAAATA+GGG | 0.274317 | 3.2:+72340473 | None:intergenic |
| AAGGAGGTGGCTGGTGGCAG+AGG | 0.280788 | 3.2:-72340313 | MS.gene77503:CDS |
| ATTCAACTTGATACCAAGTT+TGG | 0.282616 | 3.2:+72341103 | None:intergenic |
| GATAAACTTGTTACTCTTGC+TGG | 0.316761 | 3.2:-72341248 | MS.gene77503:CDS |
| CCTTCAAACACCTTAGCTTC+AGG | 0.355634 | 3.2:+72340529 | None:intergenic |
| TTCAACTTGATACCAAGTTT+GGG | 0.358716 | 3.2:+72341104 | None:intergenic |
| ACACATTCAGTTATATTAGA+TGG | 0.359046 | 3.2:+72341041 | None:intergenic |
| TGGATTGGGAAGGAGGTGGC+TGG | 0.375917 | 3.2:-72340322 | MS.gene77503:CDS |
| AGGGGAGGAACTGTTTGTTT+TGG | 0.377595 | 3.2:+72340492 | None:intergenic |
| GAAAAGAGTGGTGGTGGATT+GGG | 0.380896 | 3.2:-72340336 | MS.gene77503:CDS |
| TGCATTATTATTTCTACTGT+TGG | 0.388007 | 3.2:-72341318 | MS.gene77503:CDS |
| TTATTATTTCTACTGTTGGC+TGG | 0.403176 | 3.2:-72341314 | MS.gene77503:CDS |
| CTTATCAAGGACTTGTTTAA+GGG | 0.407090 | 3.2:+72341169 | None:intergenic |
| GATGGTATGTGACAAGCGTT+TGG | 0.413443 | 3.2:+72341059 | None:intergenic |
| GGAAAAGAGTGGTGGTGGAT+TGG | 0.435272 | 3.2:-72340337 | MS.gene77503:CDS |
| GCTAAGGTGTTTGAAGGACT+TGG | 0.437073 | 3.2:-72340523 | MS.gene77503:CDS |
| GAGGTGGCTGGTGGCAGAGG+TGG | 0.447551 | 3.2:-72340310 | MS.gene77503:CDS |
| AAGTGAGATATGAAAAGAAA+TGG | 0.450601 | 3.2:+72340273 | None:intergenic |
| GGAAGTACAACAATCTATAG+TGG | 0.456166 | 3.2:+72341190 | None:intergenic |
| CTTCAAACACCTTAGCTTCA+GGG | 0.472455 | 3.2:+72340530 | None:intergenic |
| ACCTAAATCCCCTGAAGCTA+AGG | 0.474094 | 3.2:-72340539 | MS.gene77503:CDS |
| CCTGAAGCTAAGGTGTTTGA+AGG | 0.476875 | 3.2:-72340529 | MS.gene77503:CDS |
| GATCGCAATGACCCCAAACT+TGG | 0.492547 | 3.2:-72341116 | MS.gene77503:CDS |
| GTGGTGGATTGGGAAGGAGG+TGG | 0.495091 | 3.2:-72340326 | MS.gene77503:CDS |
| GTGGTGGTGGATTGGGAAGG+AGG | 0.496077 | 3.2:-72340329 | MS.gene77503:CDS |
| TCTGAGGAAAAGAGTGGTGG+TGG | 0.499326 | 3.2:-72340342 | MS.gene77503:CDS |
| TGTTTAAGGTTCTGCTGAGA+GGG | 0.503753 | 3.2:-72340379 | MS.gene77503:intron |
| GAAGTACAACAATCTATAGT+GGG | 0.507467 | 3.2:+72341191 | None:intergenic |
| ATTGGGAAGGAGGTGGCTGG+TGG | 0.530641 | 3.2:-72340319 | MS.gene77503:CDS |
| TCAAACTTGAACTTCAAGCT+AGG | 0.546383 | 3.2:+72340244 | None:intergenic |
| TTCAAACACCTTAGCTTCAG+GGG | 0.554009 | 3.2:+72340531 | None:intergenic |
| ATAATTACCGCTGGAAATAG+GGG | 0.565206 | 3.2:+72340474 | None:intergenic |
| GGTTGTCTTCCATACGTTGG+TGG | 0.578596 | 3.2:-72341227 | MS.gene77503:CDS |
| GCTGGTTGTCTTCCATACGT+TGG | 0.583066 | 3.2:-72341230 | MS.gene77503:CDS |
| TTGGCACTACCACCAACGTA+TGG | 0.586024 | 3.2:+72341218 | None:intergenic |
| TGGAAGCTGTACAGCAAGAG+TGG | 0.593369 | 3.2:+72341079 | None:intergenic |
| TCAACTTGATACCAAGTTTG+GGG | 0.608436 | 3.2:+72341105 | None:intergenic |
| ATGTTTAAGGTTCTGCTGAG+AGG | 0.614875 | 3.2:-72340380 | MS.gene77503:intron |
| AGAGTGGTGGTGGATTGGGA+AGG | 0.615185 | 3.2:-72340332 | MS.gene77503:CDS |
| GGGATCAAGCTCAAGTTCTG+AGG | 0.620498 | 3.2:-72340358 | MS.gene77503:CDS |
| GGTCATTGCGATCTTTGATG+AGG | 0.621163 | 3.2:+72341126 | None:intergenic |
| GTTTAAGGTTCTGCTGAGAG+GGG | 0.633464 | 3.2:-72340378 | MS.gene77503:intron |
| AAGTACAACAATCTATAGTG+GGG | 0.642782 | 3.2:+72341192 | None:intergenic |
| AGTTCCTCCCCTATTTCCAG+CGG | 0.660557 | 3.2:-72340481 | MS.gene77503:intron |
| ATTACCGCTGGAAATAGGGG+AGG | 0.669828 | 3.2:+72340477 | None:intergenic |
| TCAAGTTCTGAGGAAAAGAG+TGG | 0.677014 | 3.2:-72340348 | MS.gene77503:CDS |
| AGTACAACAATCTATAGTGG+GGG | 0.691483 | 3.2:+72341193 | None:intergenic |
| AGTTCTGAGGAAAAGAGTGG+TGG | 0.693229 | 3.2:-72340345 | MS.gene77503:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATGAGAATTTTTTTTTGT+TGG | - | chr3.2:72340921-72340940 | MS.gene77503:intron | 15.0% |
| !! | AAAATTATAATAATTACCGC+TGG | + | chr3.2:72341139-72341158 | None:intergenic | 20.0% |
| !! | ATATAAATAAGGCTTAATCA+TGG | - | chr3.2:72340804-72340823 | MS.gene77503:intron | 20.0% |
| !!! | TAGTTTGCTTTATGTATTAA+GGG | - | chr3.2:72340625-72340644 | MS.gene77503:intron | 20.0% |
| !!! | TTAGTTTGCTTTATGTATTA+AGG | - | chr3.2:72340624-72340643 | MS.gene77503:intron | 20.0% |
| ! | AAGTGAGATATGAAAAGAAA+TGG | + | chr3.2:72341331-72341350 | None:intergenic | 25.0% |
| ! | ACACATTCAGTTATATTAGA+TGG | + | chr3.2:72340563-72340582 | None:intergenic | 25.0% |
| ! | AGAACCTTAAACATTATTAG+AGG | + | chr3.2:72341215-72341234 | None:intergenic | 25.0% |
| ! | ATAATCTTCAAAAGTAAGTG+AGG | - | chr3.2:72340835-72340854 | MS.gene77503:intron | 25.0% |
| ! | TCTAATATAACTGAATGTGT+AGG | - | chr3.2:72340563-72340582 | MS.gene77503:intron | 25.0% |
| !!! | CACTTACTTTTGAAGATTAT+TGG | + | chr3.2:72340835-72340854 | None:intergenic | 25.0% |
| !!! | GAGAATTTTTTTTTGTTGGT+CGG | - | chr3.2:72340925-72340944 | MS.gene77503:intron | 25.0% |
| !!! | TGCATTATTATTTCTACTGT+TGG | - | chr3.2:72340283-72340302 | MS.gene77503:CDS | 25.0% |
| AAGTACAACAATCTATAGTG+GGG | + | chr3.2:72340412-72340431 | None:intergenic | 30.0% | |
| AATAATTACCGCTGGAAATA+GGG | + | chr3.2:72341131-72341150 | None:intergenic | 30.0% | |
| ATTCAACTTGATACCAAGTT+TGG | + | chr3.2:72340501-72340520 | None:intergenic | 30.0% | |
| CATATGTATATAGTCCAATC+AGG | + | chr3.2:72340651-72340670 | None:intergenic | 30.0% | |
| GAAGTACAACAATCTATAGT+GGG | + | chr3.2:72340413-72340432 | None:intergenic | 30.0% | |
| TAATAATTACCGCTGGAAAT+AGG | + | chr3.2:72341132-72341151 | None:intergenic | 30.0% | |
| TGTGCCTCTAATAATGTTTA+AGG | - | chr3.2:72341208-72341227 | MS.gene77503:CDS | 30.0% | |
| TTCAACTTGATACCAAGTTT+GGG | + | chr3.2:72340500-72340519 | None:intergenic | 30.0% | |
| ! | CTTATCAAGGACTTGTTTAA+GGG | + | chr3.2:72340435-72340454 | None:intergenic | 30.0% |
| ! | TAATGCAGTTACACTTTTGT+TGG | + | chr3.2:72340270-72340289 | None:intergenic | 30.0% |
| ! | TCTTATCAAGGACTTGTTTA+AGG | + | chr3.2:72340436-72340455 | None:intergenic | 30.0% |
| !! | ACATTCCATTGAGTTGAATT+AGG | + | chr3.2:72340997-72341016 | None:intergenic | 30.0% |
| !! | ACTTTTGAAGATTATTGGAC+CGG | + | chr3.2:72340830-72340849 | None:intergenic | 30.0% |
| !! | TTATTATTTCTACTGTTGGC+TGG | - | chr3.2:72340287-72340306 | MS.gene77503:CDS | 30.0% |
| !!! | TGCATTTTTTGGTCTTATCA+AGG | + | chr3.2:72340448-72340467 | None:intergenic | 30.0% |
| AAATAAGGCTTAATCATGGC+CGG | - | chr3.2:72340808-72340827 | MS.gene77503:intron | 35.0% | |
| AATGTCTCATGTGACAAAAG+AGG | + | chr3.2:72340887-72340906 | None:intergenic | 35.0% | |
| AGTACAACAATCTATAGTGG+GGG | + | chr3.2:72340411-72340430 | None:intergenic | 35.0% | |
| ATAATTACCGCTGGAAATAG+GGG | + | chr3.2:72341130-72341149 | None:intergenic | 35.0% | |
| GAGGAGACATATATTGAACT+TGG | + | chr3.2:72340868-72340887 | None:intergenic | 35.0% | |
| TCAACTTGATACCAAGTTTG+GGG | + | chr3.2:72340499-72340518 | None:intergenic | 35.0% | |
| TTATGTATTAAGGGCCTGAT+TGG | - | chr3.2:72340634-72340653 | MS.gene77503:intron | 35.0% | |
| ! | GGAAGTACAACAATCTATAG+TGG | + | chr3.2:72340414-72340433 | None:intergenic | 35.0% |
| !! | GATAAACTTGTTACTCTTGC+TGG | - | chr3.2:72340353-72340372 | MS.gene77503:CDS | 35.0% |
| !!! | GAGGATACAGATGCATTTTT+TGG | + | chr3.2:72340459-72340478 | None:intergenic | 35.0% |
| CTTCAAACACCTTAGCTTCA+GGG | + | chr3.2:72341074-72341093 | None:intergenic | 40.0% | |
| GGTGACAAATGTAGAAGATC+TGG | + | chr3.2:72341045-72341064 | None:intergenic | 40.0% | |
| TTCAAACACCTTAGCTTCAG+GGG | + | chr3.2:72341073-72341092 | None:intergenic | 40.0% | |
| ! | ACAATCTATAGTGGGGGTAT+TGG | + | chr3.2:72340405-72340424 | None:intergenic | 40.0% |
| ! | ATGTTTAAGGTTCTGCTGAG+AGG | - | chr3.2:72341221-72341240 | MS.gene77503:CDS | 40.0% |
| ! | TGTTTAAGGTTCTGCTGAGA+GGG | - | chr3.2:72341222-72341241 | MS.gene77503:CDS | 40.0% |
| !! | ATTGAGTTGAATTAGGCACG+GGG | + | chr3.2:72340990-72341009 | None:intergenic | 40.0% |
| !! | CATTGAGTTGAATTAGGCAC+GGG | + | chr3.2:72340991-72341010 | None:intergenic | 40.0% |
| !! | CCATTGAGTTGAATTAGGCA+CGG | + | chr3.2:72340992-72341011 | None:intergenic | 40.0% |
| !! | TAGTAGCTTTACTTTTGCGC+CGG | - | chr3.2:72340964-72340983 | MS.gene77503:intron | 40.0% |
| !! | TCAAGTTCTGAGGAAAAGAG+TGG | - | chr3.2:72341253-72341272 | MS.gene77503:CDS | 40.0% |
| ACCTAAATCCCCTGAAGCTA+AGG | - | chr3.2:72341062-72341081 | MS.gene77503:CDS | 45.0% | |
| ACCTTAGCTTCAGGGGATTT+AGG | + | chr3.2:72341066-72341085 | None:intergenic | 45.0% | |
| CCGTGCCTAATTCAACTCAA+TGG | - | chr3.2:72340989-72341008 | MS.gene77503:intron | 45.0% | |
| CCTTCAAACACCTTAGCTTC+AGG | + | chr3.2:72341075-72341094 | None:intergenic | 45.0% | |
| GATGGTATGTGACAAGCGTT+TGG | + | chr3.2:72340545-72340564 | None:intergenic | 45.0% | |
| GGTCATTGCGATCTTTGATG+AGG | + | chr3.2:72340478-72340497 | None:intergenic | 45.0% | |
| ! | AGGGGAGGAACTGTTTGTTT+TGG | + | chr3.2:72341112-72341131 | None:intergenic | 45.0% |
| ! | CCTGAAGCTAAGGTGTTTGA+AGG | - | chr3.2:72341072-72341091 | MS.gene77503:CDS | 45.0% |
| ! | GCTAAGGTGTTTGAAGGACT+TGG | - | chr3.2:72341078-72341097 | MS.gene77503:CDS | 45.0% |
| ! | GTTTAAGGTTCTGCTGAGAG+GGG | - | chr3.2:72341223-72341242 | MS.gene77503:CDS | 45.0% |
| !! | AGTTCTGAGGAAAAGAGTGG+TGG | - | chr3.2:72341256-72341275 | MS.gene77503:CDS | 45.0% |
| !! | GAAAAGAGTGGTGGTGGATT+GGG | - | chr3.2:72341265-72341284 | MS.gene77503:CDS | 45.0% |
| !! | GCTACTAAAGCCGTCGTTTT+TGG | + | chr3.2:72340951-72340970 | None:intergenic | 45.0% |
| !! | TTAAAATGTTTATATAAATA+AGG | - | chr3.2:72340793-72340812 | MS.gene77503:intron | 5.0% |
| AGTTCCTCCCCTATTTCCAG+CGG | - | chr3.2:72341120-72341139 | MS.gene77503:CDS | 50.0% | |
| ATTACCGCTGGAAATAGGGG+AGG | + | chr3.2:72341127-72341146 | None:intergenic | 50.0% | |
| GATCGCAATGACCCCAAACT+TGG | - | chr3.2:72340485-72340504 | MS.gene77503:CDS | 50.0% | |
| GCTGGTTGTCTTCCATACGT+TGG | - | chr3.2:72340371-72340390 | MS.gene77503:CDS | 50.0% | |
| GGGATCAAGCTCAAGTTCTG+AGG | - | chr3.2:72341243-72341262 | MS.gene77503:CDS | 50.0% | |
| GGTTGTCTTCCATACGTTGG+TGG | - | chr3.2:72340374-72340393 | MS.gene77503:CDS | 50.0% | |
| TCTGAGGAAAAGAGTGGTGG+TGG | - | chr3.2:72341259-72341278 | MS.gene77503:CDS | 50.0% | |
| TGGAAGCTGTACAGCAAGAG+TGG | + | chr3.2:72340525-72340544 | None:intergenic | 50.0% | |
| TGTTGGTCGGCCAAAAACGA+CGG | - | chr3.2:72340938-72340957 | MS.gene77503:intron | 50.0% | |
| TTGGCACTACCACCAACGTA+TGG | + | chr3.2:72340386-72340405 | None:intergenic | 50.0% | |
| !! | GGAAAAGAGTGGTGGTGGAT+TGG | - | chr3.2:72341264-72341283 | MS.gene77503:CDS | 50.0% |
| AGTTGAATTAGGCACGGGGC+CGG | + | chr3.2:72340986-72341005 | None:intergenic | 55.0% | |
| !! | AGAGTGGTGGTGGATTGGGA+AGG | - | chr3.2:72341269-72341288 | MS.gene77503:CDS | 55.0% |
| ATTGGGAAGGAGGTGGCTGG+TGG | - | chr3.2:72341282-72341301 | MS.gene77503:CDS | 60.0% | |
| ! | TGGATTGGGAAGGAGGTGGC+TGG | - | chr3.2:72341279-72341298 | MS.gene77503:CDS | 60.0% |
| !! | GTGGTGGATTGGGAAGGAGG+TGG | - | chr3.2:72341275-72341294 | MS.gene77503:CDS | 60.0% |
| !! | GTGGTGGTGGATTGGGAAGG+AGG | - | chr3.2:72341272-72341291 | MS.gene77503:CDS | 60.0% |
| AAGGAGGTGGCTGGTGGCAG+AGG | - | chr3.2:72341288-72341307 | MS.gene77503:CDS | 65.0% | |
| GAGGTGGCTGGTGGCAGAGG+TGG | - | chr3.2:72341291-72341310 | MS.gene77503:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 72340257 | 72341366 | 72340257 | ID=MS.gene77503 |
| chr3.2 | mRNA | 72340257 | 72341366 | 72340257 | ID=MS.gene77503.t1;Parent=MS.gene77503 |
| chr3.2 | exon | 72341045 | 72341366 | 72341045 | ID=MS.gene77503.t1.exon1;Parent=MS.gene77503.t1 |
| chr3.2 | CDS | 72341045 | 72341366 | 72341045 | ID=cds.MS.gene77503.t1;Parent=MS.gene77503.t1 |
| chr3.2 | exon | 72340482 | 72340577 | 72340482 | ID=MS.gene77503.t1.exon2;Parent=MS.gene77503.t1 |
| chr3.2 | CDS | 72340482 | 72340577 | 72340482 | ID=cds.MS.gene77503.t1;Parent=MS.gene77503.t1 |
| chr3.2 | exon | 72340257 | 72340393 | 72340257 | ID=MS.gene77503.t1.exon3;Parent=MS.gene77503.t1 |
| chr3.2 | CDS | 72340257 | 72340393 | 72340257 | ID=cds.MS.gene77503.t1;Parent=MS.gene77503.t1 |
| Gene Sequence |
| Protein sequence |
