Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79209.t1 | XP_003601945.1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 2.30E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79209.t1 | Q8LAM0 | 82.4 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 1.6e-173 | 610.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79209.t1 | G7J3R1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 1.7e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene79209 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene79209 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene050941 | MS.gene79209 | 0.812233 | 4.70E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene79209 | 0.800183 | 1.62E-48 | -1.69E-46 |
| MS.gene051631 | MS.gene79209 | -0.803636 | 3.17E-49 | -1.69E-46 |
| MS.gene052197 | MS.gene79209 | 0.888504 | 5.57E-73 | -1.69E-46 |
| MS.gene052342 | MS.gene79209 | 0.801197 | 1.01E-48 | -1.69E-46 |
| MS.gene054893 | MS.gene79209 | 0.806093 | 9.73E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene79209 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene057320 | MS.gene79209 | 0.806939 | 6.45E-50 | -1.69E-46 |
| MS.gene057890 | MS.gene79209 | -0.824301 | 8.69E-54 | -1.69E-46 |
| MS.gene058429 | MS.gene79209 | 0.801658 | 8.11E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene79209 | 0.818228 | 2.19E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene79209 | 0.807484 | 4.94E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79209.t1 | MTR_3g087140 | 98.361 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 0.0 | 752 |
| MS.gene79209.t1 | MTR_8g090190 | 86.501 | 363 | 49 | 0 | 1 | 363 | 1 | 363 | 0.0 | 662 |
| MS.gene79209.t1 | MTR_3g100480 | 30.347 | 346 | 190 | 10 | 23 | 360 | 584 | 886 | 3.54e-37 | 143 |
| MS.gene79209.t1 | MTR_6g022290 | 28.531 | 354 | 192 | 9 | 17 | 360 | 23 | 325 | 3.15e-35 | 135 |
| MS.gene79209.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 5.71e-35 | 136 |
| MS.gene79209.t1 | MTR_3g100480 | 28.226 | 372 | 194 | 10 | 23 | 360 | 584 | 916 | 6.45e-35 | 136 |
| MS.gene79209.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 6.65e-35 | 136 |
| MS.gene79209.t1 | MTR_6g022310 | 28.933 | 356 | 188 | 10 | 17 | 360 | 121 | 423 | 7.18e-35 | 135 |
| MS.gene79209.t1 | MTR_5g030360 | 29.855 | 345 | 182 | 10 | 24 | 360 | 155 | 447 | 7.55e-35 | 135 |
| MS.gene79209.t1 | MTR_5g066000 | 31.481 | 324 | 186 | 10 | 23 | 340 | 542 | 835 | 1.41e-34 | 135 |
| MS.gene79209.t1 | MTR_6g022300 | 27.666 | 347 | 190 | 9 | 24 | 360 | 68 | 363 | 1.68e-31 | 125 |
| MS.gene79209.t1 | MTR_1g014680 | 29.781 | 319 | 186 | 8 | 24 | 334 | 182 | 470 | 2.89e-31 | 125 |
| MS.gene79209.t1 | MTR_4g115880 | 26.450 | 431 | 189 | 14 | 15 | 360 | 191 | 578 | 1.60e-30 | 122 |
| MS.gene79209.t1 | MTR_1g014260 | 29.539 | 369 | 186 | 14 | 16 | 340 | 176 | 514 | 2.01e-30 | 122 |
| MS.gene79209.t1 | MTR_5g032380 | 29.102 | 323 | 190 | 8 | 23 | 338 | 424 | 714 | 3.68e-30 | 122 |
| MS.gene79209.t1 | MTR_2g070390 | 27.746 | 346 | 211 | 8 | 23 | 365 | 22 | 331 | 4.81e-29 | 119 |
| MS.gene79209.t1 | MTR_2g071620 | 30.172 | 348 | 187 | 12 | 24 | 360 | 465 | 767 | 2.30e-28 | 117 |
| MS.gene79209.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 3.89e-28 | 116 |
| MS.gene79209.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 4.17e-28 | 116 |
| MS.gene79209.t1 | MTR_5g430360 | 29.655 | 290 | 150 | 8 | 78 | 360 | 37 | 279 | 8.59e-28 | 114 |
| MS.gene79209.t1 | MTR_8g471100 | 26.744 | 344 | 193 | 9 | 24 | 360 | 213 | 504 | 9.19e-26 | 108 |
| MS.gene79209.t1 | MTR_8g067060 | 26.744 | 344 | 193 | 9 | 24 | 360 | 204 | 495 | 1.19e-25 | 108 |
| MS.gene79209.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.60e-25 | 108 |
| MS.gene79209.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.67e-25 | 108 |
| MS.gene79209.t1 | MTR_2g060050 | 27.100 | 369 | 221 | 13 | 24 | 363 | 183 | 532 | 8.43e-22 | 97.1 |
| MS.gene79209.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 201 | 477 | 3.60e-21 | 95.9 |
| MS.gene79209.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 202 | 478 | 3.98e-21 | 95.5 |
| MS.gene79209.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 200 | 476 | 4.05e-21 | 95.5 |
| MS.gene79209.t1 | MTR_8g064910 | 25.072 | 347 | 201 | 13 | 24 | 360 | 55 | 352 | 2.97e-19 | 89.0 |
| MS.gene79209.t1 | MTR_4g111860 | 25.496 | 353 | 195 | 11 | 24 | 360 | 88 | 388 | 7.74e-19 | 87.8 |
| MS.gene79209.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 754 | 901 | 3.27e-16 | 80.9 |
| MS.gene79209.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 771 | 918 | 3.30e-16 | 80.9 |
| MS.gene79209.t1 | MTR_2g087710 | 27.234 | 235 | 141 | 8 | 137 | 364 | 652 | 863 | 1.22e-14 | 75.9 |
| MS.gene79209.t1 | MTR_7g106570 | 29.778 | 225 | 127 | 10 | 153 | 363 | 681 | 888 | 4.60e-14 | 73.9 |
| MS.gene79209.t1 | MTR_1g077980 | 29.091 | 165 | 96 | 5 | 208 | 366 | 765 | 914 | 4.47e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79209.t1 | AT2G22310 | 82.418 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 0.0 | 629 |
| MS.gene79209.t1 | AT4G39910 | 81.471 | 367 | 64 | 3 | 1 | 363 | 1 | 367 | 0.0 | 624 |
| MS.gene79209.t1 | AT2G22310 | 81.763 | 329 | 57 | 2 | 36 | 363 | 4 | 330 | 0.0 | 561 |
| MS.gene79209.t1 | AT2G22310 | 81.846 | 325 | 56 | 2 | 40 | 363 | 3 | 325 | 0.0 | 555 |
| MS.gene79209.t1 | AT4G24560 | 28.280 | 343 | 199 | 10 | 24 | 360 | 543 | 844 | 4.17e-36 | 140 |
| MS.gene79209.t1 | AT5G57990 | 29.070 | 344 | 193 | 13 | 24 | 360 | 108 | 407 | 7.49e-34 | 133 |
| MS.gene79209.t1 | AT3G14400 | 28.530 | 347 | 211 | 7 | 23 | 365 | 24 | 337 | 2.43e-32 | 128 |
| MS.gene79209.t1 | AT5G65450 | 30.063 | 316 | 181 | 10 | 23 | 330 | 348 | 631 | 1.99e-31 | 125 |
| MS.gene79209.t1 | AT5G65450 | 29.747 | 316 | 182 | 9 | 23 | 330 | 329 | 612 | 2.50e-31 | 125 |
| MS.gene79209.t1 | AT4G31670 | 28.213 | 319 | 191 | 10 | 24 | 334 | 169 | 457 | 1.15e-30 | 123 |
| MS.gene79209.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 5 | 293 | 2.99e-28 | 115 |
| MS.gene79209.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 175 | 463 | 3.55e-28 | 116 |
| MS.gene79209.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene79209.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene79209.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 443 | 745 | 7.30e-27 | 112 |
| MS.gene79209.t1 | AT4G17895 | 29.014 | 355 | 176 | 12 | 24 | 360 | 177 | 473 | 4.22e-25 | 107 |
| MS.gene79209.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene79209.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene79209.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 4.06e-24 | 104 |
| MS.gene79209.t1 | AT5G46740 | 28.696 | 345 | 196 | 10 | 24 | 360 | 164 | 466 | 1.83e-22 | 99.4 |
| MS.gene79209.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene79209.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene79209.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene79209.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene79209.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 1.61e-20 | 94.0 |
| MS.gene79209.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 197 | 520 | 1.94e-20 | 93.6 |
| MS.gene79209.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 2.12e-20 | 93.6 |
| MS.gene79209.t1 | AT5G10790 | 24.737 | 380 | 200 | 11 | 15 | 339 | 42 | 390 | 1.11e-18 | 87.4 |
| MS.gene79209.t1 | AT5G10790 | 24.474 | 380 | 201 | 11 | 15 | 339 | 171 | 519 | 2.89e-18 | 86.7 |
| MS.gene79209.t1 | AT5G46740 | 28.405 | 257 | 139 | 7 | 110 | 360 | 40 | 257 | 2.70e-16 | 80.5 |
| MS.gene79209.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 761 | 911 | 9.60e-14 | 73.2 |
| MS.gene79209.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 719 | 869 | 1.02e-13 | 73.2 |
| MS.gene79209.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene79209.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene79209.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene79209.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene79209.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene79209.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene79209.t1 | AT4G10570 | 31.325 | 166 | 93 | 6 | 204 | 363 | 745 | 895 | 1.07e-11 | 67.0 |
| MS.gene79209.t1 | AT1G32850 | 29.651 | 172 | 96 | 7 | 203 | 366 | 729 | 883 | 2.44e-11 | 65.9 |
Find 62 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAGTGCAGACATTCTT+TGG | 0.226632 | 3.1:+70141752 | MS.gene79209:CDS |
| TCACACCTGTCTTCCTCTTC+TGG | 0.239068 | 3.1:-70139628 | None:intergenic |
| GAACAATTGCTACAATATTA+TGG | 0.282416 | 3.1:+70138527 | MS.gene79209:CDS |
| AAATGAACTTGTTGACATTC+TGG | 0.297380 | 3.1:+70140507 | MS.gene79209:CDS |
| CAACCTCTGTACAAATCGTT+TGG | 0.322213 | 3.1:-70139657 | None:intergenic |
| CCAAAGTAATGTTCTCCTTC+AGG | 0.328815 | 3.1:-70137661 | None:intergenic |
| TACTTTGGCCTCGAGAATTT+CGG | 0.330275 | 3.1:+70137676 | MS.gene79209:CDS |
| CAAAACATAACCAGTGGTTA+TGG | 0.364423 | 3.1:-70141700 | None:intergenic |
| TTGCAAGCACCTTGTCTCAT+TGG | 0.376816 | 3.1:-70140875 | None:intergenic |
| TTGCAGTAGTTGTCCATGTT+GGG | 0.380146 | 3.1:+70141636 | MS.gene79209:CDS |
| CCATTAGCTAAACCACTCTT+TGG | 0.383199 | 3.1:-70140598 | None:intergenic |
| CTTCAGTGCAGACATTCTTT+GGG | 0.391927 | 3.1:+70141753 | MS.gene79209:CDS |
| TGTAGCAATTGTTCTCGAAA+TGG | 0.394146 | 3.1:-70138518 | None:intergenic |
| AACCTCTGTACAAATCGTTT+GGG | 0.398526 | 3.1:-70139656 | None:intergenic |
| AACGCGCTTATGGGTGGTTC+TGG | 0.402741 | 3.1:+70137604 | None:intergenic |
| TTGTCTTTCCCCTTGAACTC+AGG | 0.435602 | 3.1:+70141570 | MS.gene79209:CDS |
| CACACCTGTCTTCCTCTTCT+GGG | 0.437291 | 3.1:-70139627 | None:intergenic |
| TATCACTCAACCTGAGTTCA+AGG | 0.443968 | 3.1:-70141580 | None:intergenic |
| CCTGAAGGAGAACATTACTT+TGG | 0.451777 | 3.1:+70137661 | MS.gene79209:CDS |
| CCAAAGAGTGGTTTAGCTAA+TGG | 0.456689 | 3.1:+70140598 | MS.gene79209:CDS |
| CAAAGTAATGTTCTCCTTCA+GGG | 0.463000 | 3.1:-70137660 | None:intergenic |
| AAAAGAGCCTTTAGCTACTT+GGG | 0.466028 | 3.1:+70140627 | MS.gene79209:CDS |
| TTGTGCACCCAAGTAGCTAA+AGG | 0.471803 | 3.1:-70140634 | None:intergenic |
| TTTGCAGTAGTTGTCCATGT+TGG | 0.472175 | 3.1:+70141635 | MS.gene79209:CDS |
| ACAAATAGTTCAAGAACTCA+TGG | 0.473994 | 3.1:-70140483 | None:intergenic |
| CAGACATAATGTCCGTGGTT+GGG | 0.501159 | 3.1:-70141665 | None:intergenic |
| AAAGAGACCTCCACGTGTCT+TGG | 0.509264 | 3.1:+70141481 | MS.gene79209:CDS |
| TAGTTGTCCATGTTGGGAGT+GGG | 0.524445 | 3.1:+70141642 | MS.gene79209:CDS |
| TCTAAACTCGAGAAGGCTCT+CGG | 0.528934 | 3.1:+70137628 | MS.gene79209:CDS |
| AGTTCCCAGAAGAGGAAGAC+AGG | 0.531654 | 3.1:+70139623 | MS.gene79209:CDS |
| GTAGTTGTCCATGTTGGGAG+TGG | 0.545060 | 3.1:+70141641 | MS.gene79209:CDS |
| GGTTGGGCCCACTCCCAACA+TGG | 0.549398 | 3.1:-70141649 | None:intergenic |
| GTTTGCAAGAAGCTCAGAAG+AGG | 0.550711 | 3.1:+70141450 | MS.gene79209:intron |
| ATCACTCAACCTGAGTTCAA+GGG | 0.571357 | 3.1:-70141579 | None:intergenic |
| GCAGACATAATGTCCGTGGT+TGG | 0.577071 | 3.1:-70141666 | None:intergenic |
| CTCCCAAACGATTTGTACAG+AGG | 0.577523 | 3.1:+70139654 | MS.gene79209:CDS |
| TATAGATAAGTTCCCAGAAG+AGG | 0.577641 | 3.1:+70139615 | MS.gene79209:intron |
| CTTCCGTAGCTATATGCACC+AGG | 0.590612 | 3.1:+70139697 | MS.gene79209:CDS |
| TTCTGGTTCTAAACTCGAGA+AGG | 0.590698 | 3.1:+70137621 | MS.gene79209:CDS |
| CAAATAGTTCAAGAACTCAT+GGG | 0.594052 | 3.1:-70140482 | None:intergenic |
| GTTGGGAGTGGGCCCAACCA+CGG | 0.596385 | 3.1:+70141653 | MS.gene79209:CDS |
| AATGTGAAACTGTTACCGCT+AGG | 0.596426 | 3.1:+70140896 | MS.gene79209:CDS |
| CCATTCGCAATCTTCTCAGA+AGG | 0.599118 | 3.1:-70140574 | None:intergenic |
| CAATTCAACGCGCTTATGGG+TGG | 0.601033 | 3.1:+70137598 | None:intergenic |
| TTTAAGTACATGGAACAGCT+GGG | 0.603531 | 3.1:+70141521 | MS.gene79209:CDS |
| GTACCTGGTGCATATAGCTA+CGG | 0.605797 | 3.1:-70139700 | None:intergenic |
| ATTGCGAATGGACCAAAGAG+TGG | 0.607250 | 3.1:+70140586 | MS.gene79209:CDS |
| CGTAAAACAAAATGTAACCA+TGG | 0.617281 | 3.1:-70141805 | None:intergenic |
| CTCGGCGATAATTTCCCTGA+AGG | 0.623448 | 3.1:+70137646 | MS.gene79209:CDS |
| TCACTCAACCTGAGTTCAAG+GGG | 0.625682 | 3.1:-70141578 | None:intergenic |
| TTCAACAATAATACAGACCA+TGG | 0.626392 | 3.1:+70141788 | MS.gene79209:CDS |
| CCTTCTGAGAAGATTGCGAA+TGG | 0.627827 | 3.1:+70140574 | MS.gene79209:CDS |
| CGTCGTCAAAACATAACCAG+TGG | 0.628688 | 3.1:-70141706 | None:intergenic |
| ATGTGAAACTGTTACCGCTA+GGG | 0.633533 | 3.1:+70140897 | MS.gene79209:CDS |
| CAAGGCAGACATAATGTCCG+TGG | 0.637860 | 3.1:-70141670 | None:intergenic |
| TGACGACGAAACTGTCGAGG+TGG | 0.668810 | 3.1:+70141721 | MS.gene79209:CDS |
| TGAATGACCAAGACACGTGG+AGG | 0.677606 | 3.1:-70141488 | None:intergenic |
| AAGTATTGCCGAAATTCTCG+AGG | 0.684941 | 3.1:-70137684 | None:intergenic |
| GGTAAGACAGCTTCTTGTAG+CGG | 0.692354 | 3.1:-70141544 | None:intergenic |
| AGATGAATGACCAAGACACG+TGG | 0.706612 | 3.1:-70141491 | None:intergenic |
| GTTCAAGGGGAAAGACAACA+CGG | 0.707575 | 3.1:-70141565 | None:intergenic |
| GAATACTTACCAATGAGACA+AGG | 0.751910 | 3.1:+70140866 | MS.gene79209:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATTTATTATATGTATTT+GGG | + | chr3.1:70138266-70138285 | MS.gene79209:intron | 10.0% |
| !! | TACTATTTATTATATGTATT+TGG | + | chr3.1:70138265-70138284 | MS.gene79209:intron | 10.0% |
| !! | TTAAAAAAAAGTAGTAAAAT+AGG | - | chr3.1:70141084-70141103 | None:intergenic | 10.0% |
| !!! | AGATTTTTAAATTTTCATTT+CGG | + | chr3.1:70140812-70140831 | MS.gene79209:intron | 10.0% |
| !!! | ATTTTACTACTTTTTTTTAA+AGG | + | chr3.1:70141084-70141103 | MS.gene79209:intron | 10.0% |
| !!! | TTTTACTACTTTTTTTTAAA+GGG | + | chr3.1:70141085-70141104 | MS.gene79209:intron | 10.0% |
| !! | AGATATTATTAAAAAAGAGA+CGG | + | chr3.1:70138835-70138854 | MS.gene79209:intron | 15.0% |
| !! | TAAATCAGAATTATAAACAA+TGG | - | chr3.1:70138985-70139004 | None:intergenic | 15.0% |
| !! | TTATGATTATAGAATTTATC+TGG | + | chr3.1:70138697-70138716 | MS.gene79209:intron | 15.0% |
| !!! | GTTATTTTATTTTTGTTAGA+AGG | + | chr3.1:70140208-70140227 | MS.gene79209:intron | 15.0% |
| !!! | TCTCTTTTTTAATAATATCT+GGG | - | chr3.1:70138835-70138854 | None:intergenic | 15.0% |
| !!! | TTTACTCTAAAATAAACTTA+AGG | - | chr3.1:70137959-70137978 | None:intergenic | 15.0% |
| !!! | TTTTTATTACTTTTAGTAAG+AGG | + | chr3.1:70141108-70141127 | MS.gene79209:intron | 15.0% |
| !! | AAATACAATAGCTAACAAAA+AGG | - | chr3.1:70139206-70139225 | None:intergenic | 20.0% |
| !! | ATAGTAAGTTGTTAAAATAC+GGG | + | chr3.1:70138107-70138126 | MS.gene79209:intron | 20.0% |
| !! | ATCTATATCAAGAAATAACA+TGG | - | chr3.1:70139602-70139621 | None:intergenic | 20.0% |
| !! | ATGAAATGAATGTTTCAAAA+AGG | + | chr3.1:70138022-70138041 | MS.gene79209:intron | 20.0% |
| !! | ATTAACAACTTCACAATTTA+TGG | - | chr3.1:70140730-70140749 | None:intergenic | 20.0% |
| !! | GAGATTATGAATATATCAAA+AGG | - | chr3.1:70138195-70138214 | None:intergenic | 20.0% |
| !! | GATAGTAAGTTGTTAAAATA+CGG | + | chr3.1:70138106-70138125 | MS.gene79209:intron | 20.0% |
| !! | TGGTTAAAAAGTTACTAATT+TGG | - | chr3.1:70138789-70138808 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTACTAATTTGG+TGG | - | chr3.1:70138786-70138805 | None:intergenic | 20.0% |
| !! | TTGAAACATTCATTTCATAA+TGG | - | chr3.1:70138020-70138039 | None:intergenic | 20.0% |
| !! | TTGATATATTCATAATCTCA+AGG | + | chr3.1:70138196-70138215 | MS.gene79209:intron | 20.0% |
| !!! | ATTATTGTTTTGCTGAATTT+AGG | + | chr3.1:70137877-70137896 | MS.gene79209:intron | 20.0% |
| !!! | CTAATTTTTAGTCTTACTAT+TGG | + | chr3.1:70138335-70138354 | MS.gene79209:intron | 20.0% |
| !!! | CTCTTTTTTAATAATATCTG+GGG | - | chr3.1:70138834-70138853 | None:intergenic | 20.0% |
| !!! | GTCTCTTTTTTAATAATATC+TGG | - | chr3.1:70138836-70138855 | None:intergenic | 20.0% |
| !!! | TAAAAATATTTTCTGCTCAA+GGG | - | chr3.1:70140103-70140122 | None:intergenic | 20.0% |
| !!! | TATTTTCTAAATTCTGAATC+TGG | - | chr3.1:70137760-70137779 | None:intergenic | 20.0% |
| !!! | TCTTATTTTTGTGATCATTA+TGG | - | chr3.1:70140795-70140814 | None:intergenic | 20.0% |
| !!! | TTAAAAATATTTTCTGCTCA+AGG | - | chr3.1:70140104-70140123 | None:intergenic | 20.0% |
| !!! | TTAATCTTCTCATATTTTGT+AGG | + | chr3.1:70140456-70140475 | MS.gene79209:intron | 20.0% |
| !!! | TTTTTGTTAGCTATTGTATT+TGG | + | chr3.1:70139205-70139224 | MS.gene79209:intron | 20.0% |
| ! | AAACATTCATTTCATAATGG+TGG | - | chr3.1:70138017-70138036 | None:intergenic | 25.0% |
| ! | AAACCACAAATTTAGTTACA+AGG | - | chr3.1:70138462-70138481 | None:intergenic | 25.0% |
| ! | AAACTACACATTTGAAAAAC+AGG | - | chr3.1:70140360-70140379 | None:intergenic | 25.0% |
| ! | AACATTCATTTCATAATGGT+GGG | - | chr3.1:70138016-70138035 | None:intergenic | 25.0% |
| ! | AGGAACATAAATGTTAACTA+AGG | - | chr3.1:70139186-70139205 | None:intergenic | 25.0% |
| ! | ATACCTTGTAACTAAATTTG+TGG | + | chr3.1:70138456-70138475 | MS.gene79209:intron | 25.0% |
| ! | ATGAATATATCAAAAGGTTC+CGG | - | chr3.1:70138189-70138208 | None:intergenic | 25.0% |
| ! | ATTATATTCATAACCCTTTC+AGG | - | chr3.1:70141349-70141368 | None:intergenic | 25.0% |
| ! | GAACAATTGCTACAATATTA+TGG | + | chr3.1:70138527-70138546 | MS.gene79209:CDS | 25.0% |
| ! | GATAAACTTAACCAATAGTA+GGG | - | chr3.1:70139124-70139143 | None:intergenic | 25.0% |
| ! | TAGATAATATTGAAGCCATT+TGG | - | chr3.1:70141162-70141181 | None:intergenic | 25.0% |
| ! | TCAAAAGAAAGATTGCATTT+CGG | - | chr3.1:70141425-70141444 | None:intergenic | 25.0% |
| ! | TGATAAACTTAACCAATAGT+AGG | - | chr3.1:70139125-70139144 | None:intergenic | 25.0% |
| ! | TTAGTCAATCAAATACGAAA+AGG | - | chr3.1:70138669-70138688 | None:intergenic | 25.0% |
| ! | TTCGTCAAACAATGAATATT+AGG | + | chr3.1:70137903-70137922 | MS.gene79209:intron | 25.0% |
| !! | AAAATTAGTTGGTCTAAGTA+TGG | - | chr3.1:70138809-70138828 | None:intergenic | 25.0% |
| !! | AAATGATGCCATTCTAATTT+TGG | - | chr3.1:70138902-70138921 | None:intergenic | 25.0% |
| !! | AATATTAGGATGAGTTTGTT+TGG | + | chr3.1:70137917-70137936 | MS.gene79209:intron | 25.0% |
| !! | ACTAGTAATATGATGTTTTC+TGG | + | chr3.1:70141243-70141262 | MS.gene79209:intron | 25.0% |
| !! | ATGTATGTACTTTGTTTATG+AGG | + | chr3.1:70138291-70138310 | MS.gene79209:intron | 25.0% |
| !! | CTAGTAATATGATGTTTTCT+GGG | + | chr3.1:70141244-70141263 | MS.gene79209:intron | 25.0% |
| !! | TAACTAAGGAAACAGATTTT+AGG | - | chr3.1:70139172-70139191 | None:intergenic | 25.0% |
| !! | TACTATTGGTTAAGTTTATC+AGG | + | chr3.1:70139124-70139143 | MS.gene79209:intron | 25.0% |
| !!! | GTTTTAAATTGCTTTGATCA+GGG | + | chr3.1:70140844-70140863 | MS.gene79209:intron | 25.0% |
| !!! | TGTCTTGTTTATTTCTTTCA+TGG | + | chr3.1:70139565-70139584 | MS.gene79209:intron | 25.0% |
| !!! | TGTTTTAAATTGCTTTGATC+AGG | + | chr3.1:70140843-70140862 | MS.gene79209:intron | 25.0% |
| !!! | TTTGTAGGTCACTTTTAAAT+AGG | - | chr3.1:70138223-70138242 | None:intergenic | 25.0% |
| !!! | TTTTAGTCTTACTATTGGAA+AGG | + | chr3.1:70138340-70138359 | MS.gene79209:intron | 25.0% |
| AAAAAACATTTCATCCCTAG+CGG | - | chr3.1:70140914-70140933 | None:intergenic | 30.0% | |
| AAAAGTGACCTACAAAATGA+GGG | + | chr3.1:70138227-70138246 | MS.gene79209:intron | 30.0% | |
| AAACCACCAAATTCTTTGTA+GGG | + | chr3.1:70137976-70137995 | MS.gene79209:intron | 30.0% | |
| AACACATGTAGAATGAATAG+TGG | - | chr3.1:70139057-70139076 | None:intergenic | 30.0% | |
| AATTAAATCTAGTATGCGGT+GGG | + | chr3.1:70140755-70140774 | MS.gene79209:intron | 30.0% | |
| ACAAAATGAGGGACTAATAT+GGG | + | chr3.1:70138238-70138257 | MS.gene79209:intron | 30.0% | |
| ACAAATAGTTCAAGAACTCA+TGG | - | chr3.1:70140486-70140505 | None:intergenic | 30.0% | |
| ACACATGTAGAATGAATAGT+GGG | - | chr3.1:70139056-70139075 | None:intergenic | 30.0% | |
| ATCACTTTCTACAAATGTTC+CGG | - | chr3.1:70140149-70140168 | None:intergenic | 30.0% | |
| ATCATTTGCAAATTGTAGCT+AGG | + | chr3.1:70138915-70138934 | MS.gene79209:intron | 30.0% | |
| ATTCTATGCATTACTCTTGA+AGG | - | chr3.1:70139792-70139811 | None:intergenic | 30.0% | |
| CAAATAGTTCAAGAACTCAT+GGG | - | chr3.1:70140485-70140504 | None:intergenic | 30.0% | |
| CAATGATCTACCAATTGAAA+TGG | - | chr3.1:70139951-70139970 | None:intergenic | 30.0% | |
| CACATGTTATTGATGTTACA+TGG | + | chr3.1:70138745-70138764 | MS.gene79209:intron | 30.0% | |
| CAGAATTATAAACAATGGCA+TGG | - | chr3.1:70138980-70138999 | None:intergenic | 30.0% | |
| CATTTCAATTGGTAGATCAT+TGG | + | chr3.1:70139949-70139968 | MS.gene79209:intron | 30.0% | |
| CGTAAAACAAAATGTAACCA+TGG | - | chr3.1:70141808-70141827 | None:intergenic | 30.0% | |
| GATTATAGAATTTATCTGGC+TGG | + | chr3.1:70138701-70138720 | MS.gene79209:intron | 30.0% | |
| GCATATTCAGAATATCTAGA+CGG | + | chr3.1:70138400-70138419 | MS.gene79209:intron | 30.0% | |
| GCTCAATTAAATCTAGTATG+CGG | + | chr3.1:70140751-70140770 | MS.gene79209:intron | 30.0% | |
| TAAAAGTGACCTACAAAATG+AGG | + | chr3.1:70138226-70138245 | MS.gene79209:intron | 30.0% | |
| TAAACCACCAAATTCTTTGT+AGG | + | chr3.1:70137975-70137994 | MS.gene79209:intron | 30.0% | |
| TACAAAATGAGGGACTAATA+TGG | + | chr3.1:70138237-70138256 | MS.gene79209:intron | 30.0% | |
| TAGCTTATAGTTGAACTTGA+TGG | + | chr3.1:70140026-70140045 | MS.gene79209:intron | 30.0% | |
| TAGGTTAACAATCCATTGAT+TGG | + | chr3.1:70141304-70141323 | MS.gene79209:intron | 30.0% | |
| TATTGATGTTACATGGATGA+AGG | + | chr3.1:70138752-70138771 | MS.gene79209:intron | 30.0% | |
| TGAATGTGTTATGGAAACAA+AGG | - | chr3.1:70140252-70140271 | None:intergenic | 30.0% | |
| TGAGAAAAATTGCCAATCAA+TGG | - | chr3.1:70141319-70141338 | None:intergenic | 30.0% | |
| TTAACCACTTACCATCAATT+AGG | - | chr3.1:70138134-70138153 | None:intergenic | 30.0% | |
| TTCAACAATAATACAGACCA+TGG | + | chr3.1:70141788-70141807 | MS.gene79209:CDS | 30.0% | |
| TTCTACAAGGGAAACAAAAA+AGG | - | chr3.1:70139233-70139252 | None:intergenic | 30.0% | |
| TTGTAAAAAACCATAACCAC+TGG | + | chr3.1:70141690-70141709 | MS.gene79209:CDS | 30.0% | |
| ! | AAGTTACTAATTTGGTGGAT+TGG | - | chr3.1:70138781-70138800 | None:intergenic | 30.0% |
| ! | ATATTAGTCCCTCATTTTGT+AGG | - | chr3.1:70138238-70138257 | None:intergenic | 30.0% |
| ! | GTGTTTTACACTATCAATGT+GGG | - | chr3.1:70139012-70139031 | None:intergenic | 30.0% |
| ! | TATAGTTGAACTTGATGGTT+AGG | + | chr3.1:70140031-70140050 | MS.gene79209:intron | 30.0% |
| ! | TATCTGGGGTAAAAATTAGT+TGG | - | chr3.1:70138820-70138839 | None:intergenic | 30.0% |
| ! | TATGATGTTTTCTGGGTATA+TGG | + | chr3.1:70141251-70141270 | MS.gene79209:intron | 30.0% |
| ! | TTCTCATTGATTACCTGAAA+GGG | + | chr3.1:70141333-70141352 | MS.gene79209:intron | 30.0% |
| ! | TTTCTCATTGATTACCTGAA+AGG | + | chr3.1:70141332-70141351 | MS.gene79209:intron | 30.0% |
| !! | AAATGAACTTGTTGACATTC+TGG | + | chr3.1:70140507-70140526 | MS.gene79209:CDS | 30.0% |
| !! | CTAAAAACAGTTTTGCTATC+GGG | - | chr3.1:70140009-70140028 | None:intergenic | 30.0% |
| !! | GCTAAAAACAGTTTTGCTAT+CGG | - | chr3.1:70140010-70140029 | None:intergenic | 30.0% |
| !! | TCTTAAGCGTTTTAAGTACA+TGG | + | chr3.1:70141511-70141530 | MS.gene79209:CDS | 30.0% |
| !! | TTTTTGTTTCCCTTGTAGAA+TGG | + | chr3.1:70139233-70139252 | MS.gene79209:intron | 30.0% |
| !!! | AAATTAGTTTTGCTACTCGT+TGG | - | chr3.1:70138322-70138341 | None:intergenic | 30.0% |
| !!! | AGTGGTTATGGTTTTTTACA+AGG | - | chr3.1:70141691-70141710 | None:intergenic | 30.0% |
| !!! | GTTTTTTCTTCTCATTCTAC+AGG | + | chr3.1:70138478-70138497 | MS.gene79209:intron | 30.0% |
| AAAAAGAGCCTTTAGCTACT+TGG | + | chr3.1:70140626-70140645 | MS.gene79209:CDS | 35.0% | |
| AAAAGAGCCTTTAGCTACTT+GGG | + | chr3.1:70140627-70140646 | MS.gene79209:CDS | 35.0% | |
| AAAATACGGGACCTAATTGA+TGG | + | chr3.1:70138120-70138139 | MS.gene79209:intron | 35.0% | |
| AACCTCTGTACAAATCGTTT+GGG | - | chr3.1:70139659-70139678 | None:intergenic | 35.0% | |
| ATACAATGATATGAGTCGCT+TGG | - | chr3.1:70139981-70140000 | None:intergenic | 35.0% | |
| CAAAACATAACCAGTGGTTA+TGG | - | chr3.1:70141703-70141722 | None:intergenic | 35.0% | |
| CAAAATGAGGGACTAATATG+GGG | + | chr3.1:70138239-70138258 | MS.gene79209:intron | 35.0% | |
| CAAAGTAATGTTCTCCTTCA+GGG | - | chr3.1:70137663-70137682 | None:intergenic | 35.0% | |
| CAAAGTTGCACCATTTCAAT+TGG | + | chr3.1:70139938-70139957 | MS.gene79209:intron | 35.0% | |
| CAATTAAATCTAGTATGCGG+TGG | + | chr3.1:70140754-70140773 | MS.gene79209:intron | 35.0% | |
| CATTCAGTGAGGTTGAATAA+CGG | + | chr3.1:70140266-70140285 | MS.gene79209:intron | 35.0% | |
| CTTGACAGTTTAATAGAGTC+CGG | + | chr3.1:70138167-70138186 | MS.gene79209:intron | 35.0% | |
| GAAATTCCCTTAGTAACAAC+TGG | - | chr3.1:70139098-70139117 | None:intergenic | 35.0% | |
| GAATACTTACCAATGAGACA+AGG | + | chr3.1:70140866-70140885 | MS.gene79209:CDS | 35.0% | |
| GAGGTATAAGAAATTGGAAG+AGG | + | chr3.1:70139426-70139445 | MS.gene79209:intron | 35.0% | |
| GATCTTCTGATAGCATATGA+AGG | + | chr3.1:70138075-70138094 | MS.gene79209:intron | 35.0% | |
| GGAATTTCATACCCTACTAT+TGG | + | chr3.1:70139110-70139129 | MS.gene79209:intron | 35.0% | |
| GTGACCATCCAAAATTAGAA+TGG | + | chr3.1:70138891-70138910 | MS.gene79209:intron | 35.0% | |
| GTTTGTTTGGCATTAGCATT+TGG | + | chr3.1:70137930-70137949 | MS.gene79209:intron | 35.0% | |
| TACAATGATATGAGTCGCTT+GGG | - | chr3.1:70139980-70139999 | None:intergenic | 35.0% | |
| TAGTAACAACTGGAGAGAAA+AGG | - | chr3.1:70139088-70139107 | None:intergenic | 35.0% | |
| TATAAACAATGGCATGGAGA+TGG | - | chr3.1:70138974-70138993 | None:intergenic | 35.0% | |
| TATAGATAAGTTCCCAGAAG+AGG | + | chr3.1:70139615-70139634 | MS.gene79209:intron | 35.0% | |
| TCGGTTGAGGTATAAGAAAT+TGG | + | chr3.1:70139420-70139439 | MS.gene79209:intron | 35.0% | |
| TGATGAGCATGAATCTTGAT+AGG | + | chr3.1:70141285-70141304 | MS.gene79209:intron | 35.0% | |
| TGTAGCAATTGTTCTCGAAA+TGG | - | chr3.1:70138521-70138540 | None:intergenic | 35.0% | |
| TGTCAGTTTGAAAATGTACC+TGG | - | chr3.1:70139718-70139737 | None:intergenic | 35.0% | |
| TTCTCTCCAGTTGTTACTAA+GGG | + | chr3.1:70139089-70139108 | MS.gene79209:intron | 35.0% | |
| TTGTACATGTGTACAGTGTT+TGG | + | chr3.1:70139818-70139837 | MS.gene79209:intron | 35.0% | |
| TTTAAGTACATGGAACAGCT+GGG | + | chr3.1:70141521-70141540 | MS.gene79209:CDS | 35.0% | |
| TTTCCATAACACATTCAGTG+AGG | + | chr3.1:70140255-70140274 | MS.gene79209:intron | 35.0% | |
| TTTCTCTCCAGTTGTTACTA+AGG | + | chr3.1:70139088-70139107 | MS.gene79209:intron | 35.0% | |
| ! | CTAATTTTGGATGGTCACAA+AGG | - | chr3.1:70138889-70138908 | None:intergenic | 35.0% |
| ! | CTTAGCTGAACTATTTTCAC+AGG | + | chr3.1:70138595-70138614 | MS.gene79209:CDS | 35.0% |
| ! | GACATGACTAGTTACTTGTA+GGG | + | chr3.1:70139146-70139165 | MS.gene79209:intron | 35.0% |
| ! | GATGCCATTCTAATTTTGGA+TGG | - | chr3.1:70138898-70138917 | None:intergenic | 35.0% |
| ! | GGTGTTTTACACTATCAATG+TGG | - | chr3.1:70139013-70139032 | None:intergenic | 35.0% |
| ! | TCAACCGAAAAGCACAAAAA+GGG | - | chr3.1:70139408-70139427 | None:intergenic | 35.0% |
| ! | TGTACTTTGTTTATGAGGTC+AGG | + | chr3.1:70138296-70138315 | MS.gene79209:intron | 35.0% |
| ! | TTCTCCCTTTTTGTGCTTTT+CGG | + | chr3.1:70139401-70139420 | MS.gene79209:intron | 35.0% |
| !! | TTTTAAGTACATGGAACAGC+TGG | + | chr3.1:70141520-70141539 | MS.gene79209:CDS | 35.0% |
| !!! | AAATTGGAAGAGGTGCTTTT+CGG | + | chr3.1:70139436-70139455 | MS.gene79209:intron | 35.0% |
| AAAGATCTCTCTACCTGAAC+CGG | + | chr3.1:70140127-70140146 | MS.gene79209:intron | 40.0% | |
| AATGTGAAACTGTTACCGCT+AGG | + | chr3.1:70140896-70140915 | MS.gene79209:CDS | 40.0% | |
| ACGTAGATTGCATTTCTGAC+AGG | - | chr3.1:70140190-70140209 | None:intergenic | 40.0% | |
| ATCACTCAACCTGAGTTCAA+GGG | - | chr3.1:70141582-70141601 | None:intergenic | 40.0% | |
| ATCTTTCTTGCAGCAAAGCT+TGG | + | chr3.1:70140699-70140718 | MS.gene79209:intron | 40.0% | |
| ATGTGAAACTGTTACCGCTA+GGG | + | chr3.1:70140897-70140916 | MS.gene79209:CDS | 40.0% | |
| CAACCTCACTGAATGTGTTA+TGG | - | chr3.1:70140261-70140280 | None:intergenic | 40.0% | |
| CAACCTCTGTACAAATCGTT+TGG | - | chr3.1:70139660-70139679 | None:intergenic | 40.0% | |
| CCAAAGAGTGGTTTAGCTAA+TGG | + | chr3.1:70140598-70140617 | MS.gene79209:CDS | 40.0% | |
| CCAAAGTAATGTTCTCCTTC+AGG | - | chr3.1:70137664-70137683 | None:intergenic | 40.0% | |
| CCATTAGCTAAACCACTCTT+TGG | - | chr3.1:70140601-70140620 | None:intergenic | 40.0% | |
| CCTGAAGGAGAACATTACTT+TGG | + | chr3.1:70137661-70137680 | MS.gene79209:CDS | 40.0% | |
| CCTGCAAATCCATTCTACAA+GGG | - | chr3.1:70139245-70139264 | None:intergenic | 40.0% | |
| CTTCAGTGCAGACATTCTTT+GGG | + | chr3.1:70141753-70141772 | MS.gene79209:CDS | 40.0% | |
| GATAGTGTAAAACACCACAC+TGG | + | chr3.1:70139017-70139036 | MS.gene79209:intron | 40.0% | |
| GGCTACGTTGTTTGTGAATA+TGG | + | chr3.1:70138722-70138741 | MS.gene79209:intron | 40.0% | |
| GTCTAGAGAACTGGATCTAA+AGG | - | chr3.1:70138952-70138971 | None:intergenic | 40.0% | |
| TAAAACACCACACTGGAACT+TGG | + | chr3.1:70139024-70139043 | MS.gene79209:intron | 40.0% | |
| TACTTTGGCCTCGAGAATTT+CGG | + | chr3.1:70137676-70137695 | MS.gene79209:CDS | 40.0% | |
| TATCACTCAACCTGAGTTCA+AGG | - | chr3.1:70141583-70141602 | None:intergenic | 40.0% | |
| TGATGAGCAAAGATGCCAAA+TGG | + | chr3.1:70141144-70141163 | MS.gene79209:intron | 40.0% | |
| TTCTACAAATGTTCCGGTTC+AGG | - | chr3.1:70140143-70140162 | None:intergenic | 40.0% | |
| TTGCAGTAGTTGTCCATGTT+GGG | + | chr3.1:70141636-70141655 | MS.gene79209:CDS | 40.0% | |
| TTGGGTGCACAAAAACTTTC+AGG | + | chr3.1:70140645-70140664 | MS.gene79209:CDS | 40.0% | |
| TTTGCAGTAGTTGTCCATGT+TGG | + | chr3.1:70141635-70141654 | MS.gene79209:CDS | 40.0% | |
| ! | AAGTATTGCCGAAATTCTCG+AGG | - | chr3.1:70137687-70137706 | None:intergenic | 40.0% |
| ! | CTCAACCGAAAAGCACAAAA+AGG | - | chr3.1:70139409-70139428 | None:intergenic | 40.0% |
| ! | CTTTTTGTGCTTTTCGGTTG+AGG | + | chr3.1:70139407-70139426 | MS.gene79209:intron | 40.0% |
| ! | GAACTTGATGGTTAGGATGA+TGG | + | chr3.1:70140038-70140057 | MS.gene79209:intron | 40.0% |
| ! | GGACATGACTAGTTACTTGT+AGG | + | chr3.1:70139145-70139164 | MS.gene79209:intron | 40.0% |
| ! | TTATTGCAACAGCGTTTTGC+AGG | + | chr3.1:70137708-70137727 | MS.gene79209:CDS | 40.0% |
| ! | TTGTAGAATGGATTTGCAGG+CGG | + | chr3.1:70139245-70139264 | MS.gene79209:intron | 40.0% |
| !! | TTCTGGTTCTAAACTCGAGA+AGG | + | chr3.1:70137621-70137640 | MS.gene79209:CDS | 40.0% |
| !!! | CTTGATCGTCTTTTTCAGCA+CGG | - | chr3.1:70140543-70140562 | None:intergenic | 40.0% |
| !!! | TTGATCGTCTTTTTCAGCAC+GGG | - | chr3.1:70140542-70140561 | None:intergenic | 40.0% |
| AGATGAATGACCAAGACACG+TGG | - | chr3.1:70141494-70141513 | None:intergenic | 45.0% | |
| AGCTGAGAAGCAACTAAGCA+GGG | - | chr3.1:70139879-70139898 | None:intergenic | 45.0% | |
| AGGCCCTACAAAGAATTTGG+TGG | - | chr3.1:70137982-70138001 | None:intergenic | 45.0% | |
| ATGGAGATGGTCTAGAGAAC+TGG | - | chr3.1:70138961-70138980 | None:intergenic | 45.0% | |
| ATTGCGAATGGACCAAAGAG+TGG | + | chr3.1:70140586-70140605 | MS.gene79209:CDS | 45.0% | |
| CAAGATTCATGCTCATCACG+TGG | - | chr3.1:70141283-70141302 | None:intergenic | 45.0% | |
| CAGACATAATGTCCGTGGTT+GGG | - | chr3.1:70141668-70141687 | None:intergenic | 45.0% | |
| CCATTCGCAATCTTCTCAGA+AGG | - | chr3.1:70140577-70140596 | None:intergenic | 45.0% | |
| CCTCATATGCAAGCAATGTC+AGG | - | chr3.1:70138646-70138665 | None:intergenic | 45.0% | |
| CCTGACATTGCTTGCATATG+AGG | + | chr3.1:70138643-70138662 | MS.gene79209:intron | 45.0% | |
| CGTCGTCAAAACATAACCAG+TGG | - | chr3.1:70141709-70141728 | None:intergenic | 45.0% | |
| CGTGCTGAAAAAGACGATCA+AGG | + | chr3.1:70140541-70140560 | MS.gene79209:CDS | 45.0% | |
| CTCCCAAACGATTTGTACAG+AGG | + | chr3.1:70139654-70139673 | MS.gene79209:CDS | 45.0% | |
| GAGAGGCCCTACAAAGAATT+TGG | - | chr3.1:70137985-70138004 | None:intergenic | 45.0% | |
| GCCTGCAAATCCATTCTACA+AGG | - | chr3.1:70139246-70139265 | None:intergenic | 45.0% | |
| GCTTCAGTGCAGACATTCTT+TGG | + | chr3.1:70141752-70141771 | MS.gene79209:CDS | 45.0% | |
| GGTAAGACAGCTTCTTGTAG+CGG | - | chr3.1:70141547-70141566 | None:intergenic | 45.0% | |
| GTACCTGGTGCATATAGCTA+CGG | - | chr3.1:70139703-70139722 | None:intergenic | 45.0% | |
| GTTCAAGGGGAAAGACAACA+CGG | - | chr3.1:70141568-70141587 | None:intergenic | 45.0% | |
| GTTTGCAAGAAGCTCAGAAG+AGG | + | chr3.1:70141450-70141469 | MS.gene79209:intron | 45.0% | |
| TAGTTGTCCATGTTGGGAGT+GGG | + | chr3.1:70141642-70141661 | MS.gene79209:CDS | 45.0% | |
| TCACTCAACCTGAGTTCAAG+GGG | - | chr3.1:70141581-70141600 | None:intergenic | 45.0% | |
| TCTAAACTCGAGAAGGCTCT+CGG | + | chr3.1:70137628-70137647 | MS.gene79209:CDS | 45.0% | |
| TGAGTTACCTTCACAGGTGA+AGG | + | chr3.1:70140329-70140348 | MS.gene79209:intron | 45.0% | |
| TTGCAAGCACCTTGTCTCAT+TGG | - | chr3.1:70140878-70140897 | None:intergenic | 45.0% | |
| TTGTCTTTCCCCTTGAACTC+AGG | + | chr3.1:70141570-70141589 | MS.gene79209:CDS | 45.0% | |
| TTGTGCACCCAAGTAGCTAA+AGG | - | chr3.1:70140637-70140656 | None:intergenic | 45.0% | |
| ! | AGGATGATGGTTCACTAGCT+GGG | + | chr3.1:70140051-70140070 | MS.gene79209:intron | 45.0% |
| ! | CCCTTGTAGAATGGATTTGC+AGG | + | chr3.1:70139242-70139261 | MS.gene79209:intron | 45.0% |
| ! | CCTTCTGAGAAGATTGCGAA+TGG | + | chr3.1:70140574-70140593 | MS.gene79209:CDS | 45.0% |
| ! | GGGACCTAATTGATGGTAAG+TGG | + | chr3.1:70138127-70138146 | MS.gene79209:intron | 45.0% |
| ! | TAGGATGATGGTTCACTAGC+TGG | + | chr3.1:70140050-70140069 | MS.gene79209:intron | 45.0% |
| ! | TTTTGACGACGAAACTGTCG+AGG | + | chr3.1:70141718-70141737 | MS.gene79209:CDS | 45.0% |
| !! | TTTTCTGTGACAAGTGCTGC+AGG | + | chr3.1:70141025-70141044 | MS.gene79209:CDS | 45.0% |
| AAAGAGACCTCCACGTGTCT+TGG | + | chr3.1:70141481-70141500 | MS.gene79209:CDS | 50.0% | |
| AGTTCCCAGAAGAGGAAGAC+AGG | + | chr3.1:70139623-70139642 | MS.gene79209:CDS | 50.0% | |
| ATGATGGTTCACTAGCTGGG+CGG | + | chr3.1:70140054-70140073 | MS.gene79209:intron | 50.0% | |
| CAAGGCAGACATAATGTCCG+TGG | - | chr3.1:70141673-70141692 | None:intergenic | 50.0% | |
| CACACCTGTCTTCCTCTTCT+GGG | - | chr3.1:70139630-70139649 | None:intergenic | 50.0% | |
| CAGCTGAGAAGCAACTAAGC+AGG | - | chr3.1:70139880-70139899 | None:intergenic | 50.0% | |
| CTCGGCGATAATTTCCCTGA+AGG | + | chr3.1:70137646-70137665 | MS.gene79209:CDS | 50.0% | |
| CTCGTCTGAGTTACCTTCAC+AGG | + | chr3.1:70140323-70140342 | MS.gene79209:intron | 50.0% | |
| CTGTGAAGGTAACTCAGACG+AGG | - | chr3.1:70140325-70140344 | None:intergenic | 50.0% | |
| CTTCCGTAGCTATATGCACC+AGG | + | chr3.1:70139697-70139716 | MS.gene79209:CDS | 50.0% | |
| CTTTGTAGGGCCTCTCAAAC+AGG | + | chr3.1:70137989-70138008 | MS.gene79209:intron | 50.0% | |
| GAAGGTAACTCAGACGAGGA+AGG | - | chr3.1:70140321-70140340 | None:intergenic | 50.0% | |
| GCAGACATAATGTCCGTGGT+TGG | - | chr3.1:70141669-70141688 | None:intergenic | 50.0% | |
| GGAATGACCTTCACCTGTGA+AGG | - | chr3.1:70140339-70140358 | None:intergenic | 50.0% | |
| GTAGTTGTCCATGTTGGGAG+TGG | + | chr3.1:70141641-70141660 | MS.gene79209:CDS | 50.0% | |
| GTGTTTGCCAAGTTCCAGTG+TGG | - | chr3.1:70139034-70139053 | None:intergenic | 50.0% | |
| TCACACCTGTCTTCCTCTTC+TGG | - | chr3.1:70139631-70139650 | None:intergenic | 50.0% | |
| TGAATGACCAAGACACGTGG+AGG | - | chr3.1:70141491-70141510 | None:intergenic | 50.0% | |
| ! | AATGGTGGGACCTGTTTGAG+AGG | - | chr3.1:70138002-70138021 | None:intergenic | 50.0% |
| ! | TAGAATGGATTTGCAGGCGG+TGG | + | chr3.1:70139248-70139267 | MS.gene79209:intron | 50.0% |
| CTAGCTGGGCGGTCAATAGA+AGG | + | chr3.1:70140065-70140084 | MS.gene79209:intron | 55.0% | |
| TGACGACGAAACTGTCGAGG+TGG | + | chr3.1:70141721-70141740 | MS.gene79209:CDS | 55.0% | |
| GGTTGGGCCCACTCCCAACA+TGG | - | chr3.1:70141652-70141671 | None:intergenic | 65.0% | |
| GTTGGGAGTGGGCCCAACCA+CGG | + | chr3.1:70141653-70141672 | MS.gene79209:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 70137613 | 70141847 | 70137613 | ID=MS.gene79209 |
| chr3.1 | mRNA | 70137613 | 70141847 | 70137613 | ID=MS.gene79209.t1;Parent=MS.gene79209 |
| chr3.1 | exon | 70137613 | 70137729 | 70137613 | ID=MS.gene79209.t1.exon1;Parent=MS.gene79209.t1 |
| chr3.1 | CDS | 70137613 | 70137729 | 70137613 | ID=cds.MS.gene79209.t1;Parent=MS.gene79209.t1 |
| chr3.1 | exon | 70138500 | 70138616 | 70138500 | ID=MS.gene79209.t1.exon2;Parent=MS.gene79209.t1 |
| chr3.1 | CDS | 70138500 | 70138616 | 70138500 | ID=cds.MS.gene79209.t1;Parent=MS.gene79209.t1 |
| chr3.1 | exon | 70139620 | 70139718 | 70139620 | ID=MS.gene79209.t1.exon3;Parent=MS.gene79209.t1 |
| chr3.1 | CDS | 70139620 | 70139718 | 70139620 | ID=cds.MS.gene79209.t1;Parent=MS.gene79209.t1 |
| chr3.1 | exon | 70140478 | 70140666 | 70140478 | ID=MS.gene79209.t1.exon4;Parent=MS.gene79209.t1 |
| chr3.1 | CDS | 70140478 | 70140666 | 70140478 | ID=cds.MS.gene79209.t1;Parent=MS.gene79209.t1 |
| chr3.1 | exon | 70140865 | 70141046 | 70140865 | ID=MS.gene79209.t1.exon5;Parent=MS.gene79209.t1 |
| chr3.1 | CDS | 70140865 | 70141046 | 70140865 | ID=cds.MS.gene79209.t1;Parent=MS.gene79209.t1 |
| chr3.1 | exon | 70141451 | 70141847 | 70141451 | ID=MS.gene79209.t1.exon6;Parent=MS.gene79209.t1 |
| chr3.1 | CDS | 70141451 | 70141847 | 70141451 | ID=cds.MS.gene79209.t1;Parent=MS.gene79209.t1 |
| Gene Sequence |
| Protein sequence |
