AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79771


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79771.t1 MTR_6g069000 98.673 452 6 0 1 452 1 452 0.0 928
MS.gene79771.t1 MTR_6g069000 98.673 452 6 0 1 452 11 462 0.0 928
MS.gene79771.t1 MTR_8g077810 36.142 451 281 4 32 475 25 475 3.19e-107 328
MS.gene79771.t1 MTR_5g020020 34.802 454 284 5 30 475 26 475 1.54e-104 320
MS.gene79771.t1 MTR_5g082520 35.165 455 282 5 31 480 19 465 5.88e-104 319
MS.gene79771.t1 MTR_7g033040 35.244 471 292 6 12 477 5 467 2.00e-103 318
MS.gene79771.t1 MTR_8g016180 32.979 470 301 6 5 469 1 461 6.13e-102 313
MS.gene79771.t1 MTR_3g070380 34.735 452 284 6 39 485 28 473 2.67e-101 312
MS.gene79771.t1 MTR_8g076510 33.036 448 279 10 41 478 40 476 1.11e-91 287
MS.gene79771.t1 MTR_5g021220 30.515 485 296 9 11 469 9 478 3.21e-87 276
MS.gene79771.t1 MTR_8g016180 31.931 404 269 4 5 403 1 403 4.53e-83 263
MS.gene79771.t1 MTR_5g010750 31.729 457 293 7 38 483 29 477 1.83e-82 263
MS.gene79771.t1 MTR_6g015910 29.362 470 306 8 12 475 10 459 4.51e-78 251
MS.gene79771.t1 MTR_7g016040 30.556 468 306 6 10 475 8 458 7.80e-78 251
MS.gene79771.t1 MTR_3g007320 28.723 470 309 8 12 475 10 459 1.09e-77 250
MS.gene79771.t1 MTR_5g010750 32.227 422 271 6 38 452 29 442 3.60e-77 248
MS.gene79771.t1 MTR_8g089800 30.805 435 276 10 40 459 43 467 8.16e-71 233
MS.gene79771.t1 MTR_5g020020 33.432 338 213 6 146 475 68 401 1.18e-67 223
MS.gene79771.t1 MTR_5g025610 29.958 474 306 11 10 477 7 460 2.79e-67 223
MS.gene79771.t1 MTR_2g031930 29.673 428 281 8 40 456 45 463 2.17e-65 219
MS.gene79771.t1 MTR_2g031920 29.231 455 295 10 40 479 41 483 2.57e-65 219
MS.gene79771.t1 MTR_2g031930 29.717 424 278 8 40 452 41 455 3.83e-65 218
MS.gene79771.t1 MTR_5g025610 29.867 452 292 10 10 456 7 438 6.04e-65 216
MS.gene79771.t1 MTR_8g072260 29.754 447 290 10 40 480 37 465 9.73e-64 214
MS.gene79771.t1 MTR_0045s0060 28.913 460 304 10 30 479 30 476 3.68e-63 213
MS.gene79771.t1 MTR_8g072260 29.904 418 270 9 40 452 37 436 6.30e-61 206
MS.gene79771.t1 MTR_4g086130 31.591 440 269 11 28 454 21 441 4.50e-60 204
MS.gene79771.t1 MTR_1g019410 28.698 453 302 8 7 452 2 440 5.27e-60 204
MS.gene79771.t1 MTR_5g014250 27.033 492 305 15 9 468 9 478 1.73e-57 198
MS.gene79771.t1 MTR_1g037580 30.932 472 304 11 13 478 19 474 1.92e-57 197
MS.gene79771.t1 MTR_5g091760 28.106 491 326 9 5 481 1 478 3.54e-56 194
MS.gene79771.t1 MTR_0045s0060 28.079 406 275 7 79 479 1 394 6.43e-55 189
MS.gene79771.t1 MTR_6g034940 27.872 470 297 13 10 459 12 459 1.97e-54 190
MS.gene79771.t1 MTR_5g092150 26.464 461 317 7 32 480 21 471 2.49e-54 189
MS.gene79771.t1 MTR_4g005230 29.605 456 287 16 40 479 43 480 3.38e-53 186
MS.gene79771.t1 MTR_5g025610 29.073 399 266 8 10 403 7 393 3.44e-53 184
MS.gene79771.t1 MTR_0045s0070 26.247 461 315 9 30 479 30 476 1.31e-52 185
MS.gene79771.t1 MTR_4g086040 29.009 424 277 9 39 454 37 444 4.87e-52 183
MS.gene79771.t1 MTR_0045s0070 27.021 433 292 8 30 452 30 448 5.67e-51 179
MS.gene79771.t1 MTR_5g014240 28.283 495 313 18 9 479 9 485 3.42e-50 179
MS.gene79771.t1 MTR_1g032950 26.222 450 300 13 40 479 43 470 3.88e-50 178
MS.gene79771.t1 MTR_8g012970 27.252 433 283 13 40 456 45 461 1.60e-49 177
MS.gene79771.t1 MTR_8g072260 28.726 369 248 7 40 403 37 395 4.06e-49 175
MS.gene79771.t1 MTR_8g100135 25.799 438 305 7 33 459 27 455 7.85e-49 174
MS.gene79771.t1 MTR_8g076940 26.386 451 309 9 13 453 19 456 9.91e-48 172
MS.gene79771.t1 MTR_7g016040 29.787 329 223 4 40 366 33 355 7.31e-47 167
MS.gene79771.t1 MTR_8g089190 26.484 438 290 10 40 460 1 423 7.70e-47 168
MS.gene79771.t1 MTR_3g112120 24.625 467 320 11 9 459 11 461 1.56e-45 166
MS.gene79771.t1 MTR_3g467130 25.866 433 298 7 37 456 30 452 4.36e-45 164
MS.gene79771.t1 MTR_3g467140 26.998 463 305 12 10 456 7 452 1.07e-44 163
MS.gene79771.t1 MTR_8g076940 26.000 400 283 7 13 403 19 414 9.67e-39 146
MS.gene79771.t1 MTR_0045s0080 25.000 384 266 8 30 403 30 401 6.66e-38 143
MS.gene79771.t1 MTR_8g100135 25.140 358 255 6 33 379 27 382 1.19e-33 131
MS.gene79771.t1 MTR_8g076940 26.039 361 254 7 13 364 19 375 6.57e-33 129
MS.gene79771.t1 MTR_8g076940 26.039 361 254 7 13 364 19 375 7.96e-33 129
MS.gene79771.t1 MTR_8g089190 25.779 353 236 9 40 375 1 344 3.53e-32 126
MS.gene79771.t1 MTR_1g032980 25.685 292 204 7 40 320 16 305 1.55e-29 120
MS.gene79771.t1 MTR_3g467140 29.167 312 195 9 158 456 21 319 2.41e-28 115
MS.gene79771.t1 MTR_5g007550 24.738 477 313 16 4 454 8 464 6.48e-27 114
MS.gene79771.t1 MTR_5g007450 24.628 471 309 15 10 454 14 464 5.93e-26 110
MS.gene79771.t1 MTR_1g037370 24.777 448 289 16 39 454 30 461 2.97e-22 100
MS.gene79771.t1 MTR_5g094570 21.980 505 340 16 10 482 10 492 1.49e-21 97.8
MS.gene79771.t1 MTR_0181s0030 22.245 481 322 15 9 454 6 469 3.62e-21 96.7
MS.gene79771.t1 MTR_5g094550 21.849 476 323 14 10 454 10 467 3.96e-21 96.7
MS.gene79771.t1 MTR_7g096340 22.708 480 310 20 45 480 40 502 4.42e-21 96.3
MS.gene79771.t1 MTR_7g075610 21.667 480 326 15 11 454 5 470 1.29e-20 95.1
MS.gene79771.t1 MTR_5g073250 22.244 499 340 16 13 482 13 492 1.34e-20 95.1
MS.gene79771.t1 MTR_5g072980 23.163 449 299 13 40 454 33 469 2.74e-20 94.0
MS.gene79771.t1 MTR_5g072930 23.163 449 299 13 40 454 33 469 2.74e-20 94.0
MS.gene79771.t1 MTR_5g094560 21.457 508 339 18 10 482 10 492 3.41e-20 93.6
MS.gene79771.t1 MTR_5g094520 21.869 503 343 17 10 482 41 523 5.92e-20 93.2
MS.gene79771.t1 MTR_1g035140 22.756 479 326 14 6 454 3 467 7.59e-20 92.8
MS.gene79771.t1 MTR_5g007460 24.945 457 289 19 35 454 4 443 8.55e-20 92.4
MS.gene79771.t1 MTR_3g057910 23.422 491 317 19 29 482 27 495 2.12e-19 91.3
MS.gene79771.t1 MTR_3g057980 22.814 469 323 12 15 454 5 463 2.52e-19 90.9
MS.gene79771.t1 MTR_5g094540 22.445 499 340 17 13 477 10 495 3.36e-19 90.9
MS.gene79771.t1 MTR_5g073230 21.400 500 303 18 27 482 28 481 3.42e-19 90.5
MS.gene79771.t1 MTR_3g057900 21.012 514 335 16 13 482 3 489 4.24e-19 90.5
MS.gene79771.t1 MTR_1g492820 22.105 475 323 15 13 453 22 483 4.46e-19 90.5
MS.gene79771.t1 MTR_1g031700 22.979 470 320 15 14 454 8 464 6.14e-19 89.7
MS.gene79771.t1 MTR_4g029690 24.042 287 196 10 40 312 43 321 6.23e-19 88.2
MS.gene79771.t1 MTR_3g057970 20.682 469 332 13 13 454 3 458 9.07e-19 89.4
MS.gene79771.t1 MTR_8g046240 22.567 483 325 17 6 454 6 473 9.30e-19 89.4
MS.gene79771.t1 MTR_5g021390 24.544 493 308 20 3 454 11 480 1.38e-18 89.0
MS.gene79771.t1 MTR_4g102310 21.973 446 303 14 40 453 39 471 1.99e-18 88.2
MS.gene79771.t1 MTR_0171s0010 30.151 199 129 4 257 454 288 477 3.14e-18 87.8
MS.gene79771.t1 MTR_4g095050 22.691 498 302 18 13 461 8 471 3.30e-18 87.8
MS.gene79771.t1 MTR_5g019010 24.254 503 328 21 15 477 9 498 3.66e-18 87.4
MS.gene79771.t1 MTR_4g025970 24.444 450 295 14 38 454 27 464 4.16e-18 87.4
MS.gene79771.t1 MTR_5g016410 22.638 508 325 18 9 477 5 483 4.25e-18 87.4
MS.gene79771.t1 MTR_4g109470 27.155 232 155 5 233 454 243 470 1.46e-17 85.9
MS.gene79771.t1 MTR_0171s0020 23.810 483 311 17 14 454 8 475 1.54e-17 85.5
MS.gene79771.t1 MTR_2g073480 25.784 287 193 9 183 460 111 386 1.78e-17 84.7
MS.gene79771.t1 MTR_4g048580 21.962 469 324 14 41 482 39 492 2.78e-17 84.7
MS.gene79771.t1 MTR_2g073440 25.784 287 193 9 183 460 178 453 3.13e-17 84.3
MS.gene79771.t1 MTR_5g018980 25.000 452 282 20 39 447 33 470 4.07e-17 84.3
MS.gene79771.t1 MTR_1g101040 24.581 358 241 11 118 454 138 487 4.54e-17 84.3
MS.gene79771.t1 MTR_5g016440 21.792 491 329 15 13 467 6 477 5.17e-17 84.0
MS.gene79771.t1 MTR_8g046210 22.453 481 328 15 6 454 6 473 5.46e-17 84.0
MS.gene79771.t1 MTR_5g018990 24.070 511 335 20 7 477 2 499 5.70e-17 84.0
MS.gene79771.t1 MTR_5g045250 28.889 225 146 6 237 453 268 486 6.80e-17 83.6
MS.gene79771.t1 MTR_7g079440 28.947 190 129 3 266 454 435 619 1.35e-16 83.2
MS.gene79771.t1 MTR_8g063280 21.941 474 333 11 8 454 4 467 1.71e-16 82.4
MS.gene79771.t1 MTR_5g073320 22.340 470 322 16 40 477 38 496 1.96e-16 82.0
MS.gene79771.t1 MTR_4g071710 24.215 223 156 4 233 454 270 480 5.16e-16 80.9
MS.gene79771.t1 MTR_8g036185 27.568 185 125 2 277 454 303 485 9.02e-16 80.1
MS.gene79771.t1 MTR_5g095220 22.345 452 292 15 30 454 18 437 9.30e-16 80.1
MS.gene79771.t1 MTR_8g008530 25.243 412 262 17 74 453 93 490 9.91e-16 80.1
MS.gene79771.t1 MTR_8g012590 28.070 228 152 5 262 480 274 498 9.92e-16 80.1
MS.gene79771.t1 MTR_8g020960 21.341 492 312 17 9 454 11 473 1.23e-15 79.7
MS.gene79771.t1 MTR_1g055325 28.226 248 163 7 220 460 252 491 1.26e-15 79.7
MS.gene79771.t1 MTR_2g073420 29.098 244 154 8 220 454 242 475 1.31e-15 79.7
MS.gene79771.t1 MTR_4g094772 24.167 480 282 21 25 461 18 458 1.51e-15 79.3
MS.gene79771.t1 MTR_8g468780 24.296 284 196 6 179 453 131 404 1.59e-15 79.0
MS.gene79771.t1 MTR_3g104560 24.167 240 171 5 223 455 137 372 1.69e-15 78.6
MS.gene79771.t1 MTR_5g045770 23.608 449 299 14 38 454 27 463 1.74e-15 79.3
MS.gene79771.t1 MTR_4g062510 25.000 184 135 2 277 459 307 488 2.29e-15 79.0
MS.gene79771.t1 MTR_5g094520 26.389 216 142 6 272 482 215 418 2.74e-15 78.2
MS.gene79771.t1 MTR_3g104560 24.167 240 171 5 223 455 272 507 3.06e-15 78.6
MS.gene79771.t1 MTR_2g437840 21.648 522 315 19 10 476 5 487 4.27e-15 78.2
MS.gene79771.t1 MTR_1g103670 20.539 482 330 15 5 454 4 464 4.66e-15 77.8
MS.gene79771.t1 MTR_7g012860 21.556 450 311 13 36 454 29 467 4.85e-15 77.8
MS.gene79771.t1 MTR_0287s0060 21.556 450 311 13 36 454 29 467 4.85e-15 77.8
MS.gene79771.t1 MTR_3g057860 22.747 466 312 18 11 442 8 459 6.14e-15 77.4
MS.gene79771.t1 MTR_3g051230 30.579 121 84 0 17 137 3 123 6.85e-15 72.8
MS.gene79771.t1 MTR_0147s0030 25.067 371 216 15 120 452 155 501 7.13e-15 77.4
MS.gene79771.t1 MTR_3g025260 21.853 421 289 11 65 447 52 470 1.04e-14 77.0
MS.gene79771.t1 MTR_1g091010 23.554 484 306 21 8 454 5 461 1.11e-14 76.6
MS.gene79771.t1 MTR_6g022450 27.632 228 153 5 262 480 285 509 1.28e-14 76.6
MS.gene79771.t1 MTR_4g026050 22.697 445 302 12 41 454 30 463 1.79e-14 75.9
MS.gene79771.t1 MTR_8g469300 29.032 186 128 3 269 453 291 473 2.28e-14 75.9
MS.gene79771.t1 MTR_1g015860 26.842 190 134 3 267 455 314 499 3.14e-14 75.5
MS.gene79771.t1 MTR_2g437880 26.577 222 148 5 245 461 261 472 4.14e-14 75.1
MS.gene79771.t1 MTR_4g102280 21.140 421 279 14 72 453 71 477 4.75e-14 74.7
MS.gene79771.t1 MTR_3g020780 19.628 484 339 11 9 454 7 478 4.86e-14 74.7
MS.gene79771.t1 MTR_4g026200 27.053 207 138 6 281 480 294 494 5.05e-14 74.7
MS.gene79771.t1 MTR_5g095260 21.569 459 305 13 30 454 31 468 6.69e-14 74.3
MS.gene79771.t1 MTR_8g098565 26.702 191 134 4 272 457 289 478 1.46e-13 73.2
MS.gene79771.t1 MTR_4g077210 21.780 427 295 13 69 463 59 478 1.59e-13 73.2
MS.gene79771.t1 MTR_7g029275 20.508 512 340 20 16 480 17 508 1.71e-13 73.2
MS.gene79771.t1 MTR_7g055793 22.249 409 274 13 74 452 45 439 1.93e-13 72.8
MS.gene79771.t1 MTR_5g019140 22.344 546 315 24 10 480 19 530 2.06e-13 72.8
MS.gene79771.t1 MTR_8g080520 20.659 455 288 15 43 453 70 495 2.11e-13 72.8
MS.gene79771.t1 MTR_2g010250 25.654 191 137 3 268 454 286 475 2.15e-13 72.8
MS.gene79771.t1 MTR_4g089020 21.896 443 308 12 39 454 29 460 2.42e-13 72.4
MS.gene79771.t1 MTR_0171s0030 26.761 213 144 6 236 441 166 373 2.52e-13 72.0
MS.gene79771.t1 MTR_2g010290 25.888 197 129 4 268 454 313 502 2.69e-13 72.4
MS.gene79771.t1 MTR_5g023680 23.937 447 296 13 40 454 5 439 2.69e-13 72.4
MS.gene79771.t1 MTR_7g055793 22.249 409 274 13 74 452 100 494 2.74e-13 72.4
MS.gene79771.t1 MTR_5g014230 38.554 83 43 3 387 468 1 76 2.95e-13 66.2
MS.gene79771.t1 MTR_0025s0110 22.983 409 276 12 74 454 101 498 3.22e-13 72.0
MS.gene79771.t1 MTR_4g062500 25.000 184 135 2 277 459 303 484 3.34e-13 72.0
MS.gene79771.t1 MTR_4g088400 23.282 451 294 20 39 447 44 484 3.68e-13 72.0
MS.gene79771.t1 MTR_8g076290 21.395 430 289 15 41 434 36 452 5.02e-13 71.6
MS.gene79771.t1 MTR_7g075540 26.882 186 128 4 270 453 287 466 5.35e-13 71.6
MS.gene79771.t1 MTR_8g035760 24.088 411 262 20 90 460 88 488 8.41e-13 70.9
MS.gene79771.t1 MTR_6g034965 23.629 474 315 17 12 454 9 466 8.42e-13 70.9
MS.gene79771.t1 MTR_2g061200 26.257 179 128 2 277 454 326 501 1.09e-12 70.5
MS.gene79771.t1 MTR_7g075580 26.733 202 134 6 260 453 273 468 1.35e-12 70.1
MS.gene79771.t1 MTR_1g107295 24.590 183 134 2 277 459 308 486 1.42e-12 70.1
MS.gene79771.t1 MTR_4g088420 27.059 170 114 5 284 447 31 196 2.01e-12 67.4
MS.gene79771.t1 MTR_5g094510 27.397 219 121 7 269 482 47 232 2.11e-12 67.8
MS.gene79771.t1 MTR_4g088425 23.702 443 288 21 41 447 40 468 2.12e-12 69.7
MS.gene79771.t1 MTR_1g107300 25.000 172 125 2 288 459 7 174 2.12e-12 67.0
MS.gene79771.t1 MTR_1g101050 25.403 248 165 6 221 454 242 483 2.32e-12 69.3
MS.gene79771.t1 MTR_0022s0290 28.652 178 121 3 277 453 310 482 2.66e-12 69.3
MS.gene79771.t1 MTR_6g035115 21.460 452 300 13 32 447 29 461 2.72e-12 69.3
MS.gene79771.t1 MTR_1g103680 23.045 486 313 16 14 463 17 477 2.95e-12 68.9
MS.gene79771.t1 MTR_7g006900 28.175 252 153 10 237 477 235 469 3.56e-12 68.9
MS.gene79771.t1 MTR_1g097220 26.512 215 134 7 262 463 304 507 3.97e-12 68.9
MS.gene79771.t1 MTR_7g028020 20.936 406 287 11 70 444 57 459 4.18e-12 68.6
MS.gene79771.t1 MTR_8g104100 24.651 215 145 5 242 454 29 228 5.64e-12 66.6
MS.gene79771.t1 MTR_1g090987 32.800 125 77 4 332 454 31 150 1.01e-11 63.9
MS.gene79771.t1 MTR_7g027960 21.324 408 283 12 70 444 57 459 1.18e-11 67.4
MS.gene79771.t1 MTR_5g009110 25.980 204 122 6 274 451 190 390 1.31e-11 66.6
MS.gene79771.t1 MTR_2g065360 22.697 445 298 18 37 447 4 436 1.40e-11 67.0
MS.gene79771.t1 MTR_8g469360 22.888 367 231 14 120 453 48 395 1.54e-11 66.6
MS.gene79771.t1 MTR_5g009110 25.980 204 122 6 274 451 338 538 1.73e-11 67.0
MS.gene79771.t1 MTR_4g119660 21.612 546 319 24 10 480 4 515 1.77e-11 66.6
MS.gene79771.t1 MTR_5g018500 27.778 198 131 6 296 484 1 195 1.89e-11 63.5
MS.gene79771.t1 MTR_8g035680 22.330 412 269 17 90 460 88 489 2.05e-11 66.6
MS.gene79771.t1 MTR_1g085680 22.273 440 279 20 58 453 67 487 2.22e-11 66.2
MS.gene79771.t1 MTR_6g008430 20.950 463 297 19 38 447 36 482 2.89e-11 66.2
MS.gene79771.t1 MTR_3g080580 21.053 475 316 21 54 483 60 520 4.52e-11 65.5
MS.gene79771.t1 MTR_4g025980 28.125 192 129 5 265 454 279 463 5.97e-11 65.1
MS.gene79771.t1 MTR_7g079440 28.986 138 95 1 266 403 435 569 6.52e-11 65.1
MS.gene79771.t1 MTR_6g008630 27.174 184 124 5 274 451 224 403 7.20e-11 64.7
MS.gene79771.t1 MTR_2g072380 27.027 222 144 7 231 447 112 320 7.49e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79771.t1 AT1G73340 70.146 479 130 3 6 483 17 483 0.0 720
MS.gene79771.t1 AT3G50660 32.165 485 292 5 30 479 29 511 5.01e-103 318
MS.gene79771.t1 AT5G05690 34.459 444 282 4 40 480 31 468 4.15e-98 304
MS.gene79771.t1 AT3G13730 32.739 449 286 6 39 479 50 490 2.21e-96 300
MS.gene79771.t1 AT3G13730 33.175 422 267 5 39 452 50 464 4.79e-93 290
MS.gene79771.t1 AT4G36380 33.257 439 278 6 40 469 69 501 6.08e-93 292
MS.gene79771.t1 AT5G14400 35.377 424 237 8 46 461 2 396 1.26e-86 272
MS.gene79771.t1 AT3G50660 32.178 404 246 3 30 405 29 432 9.51e-86 271
MS.gene79771.t1 AT5G14400 34.856 416 235 7 46 453 2 389 4.94e-84 265
MS.gene79771.t1 AT1G12740 31.659 458 298 5 32 482 23 472 1.15e-83 266
MS.gene79771.t1 AT3G30180 30.998 471 300 7 10 475 10 460 8.02e-82 261
MS.gene79771.t1 AT1G12740 31.385 462 300 6 32 482 23 478 2.19e-81 261
MS.gene79771.t1 AT1G12740 31.385 462 300 6 32 482 23 478 2.76e-81 260
MS.gene79771.t1 AT5G05690 34.048 373 241 3 40 409 31 401 2.16e-78 251
MS.gene79771.t1 AT5G38970 31.210 471 299 8 10 475 10 460 4.00e-78 252
MS.gene79771.t1 AT4G19230 29.645 479 310 10 12 480 1 462 5.24e-73 238
MS.gene79771.t1 AT5G45340 29.167 480 318 10 4 480 2 462 5.24e-72 236
MS.gene79771.t1 AT4G19230 29.935 461 297 9 12 463 1 444 1.74e-71 235
MS.gene79771.t1 AT5G14400 34.865 370 204 8 100 461 2 342 1.12e-70 229
MS.gene79771.t1 AT3G19270 29.913 458 294 11 5 454 1 439 6.14e-70 230
MS.gene79771.t1 AT5G45340 29.004 462 307 9 4 463 2 444 9.48e-70 229
MS.gene79771.t1 AT3G19270 29.956 454 297 10 5 453 1 438 4.48e-69 228
MS.gene79771.t1 AT5G38970 31.026 390 255 4 94 478 2 382 7.91e-67 220
MS.gene79771.t1 AT5G38970 31.026 390 255 4 94 478 2 382 7.91e-67 220
MS.gene79771.t1 AT5G05690 31.268 355 235 4 129 480 1 349 9.19e-66 216
MS.gene79771.t1 AT2G29090 27.964 447 301 8 39 478 48 480 2.33e-63 213
MS.gene79771.t1 AT2G29090 27.964 447 301 8 39 478 48 480 2.33e-63 213
MS.gene79771.t1 AT5G14400 33.739 329 209 4 46 367 2 328 3.97e-63 208
MS.gene79771.t1 AT1G55940 25.820 488 343 8 5 479 10 491 6.92e-62 210
MS.gene79771.t1 AT1G55940 26.522 460 319 8 5 451 10 463 2.42e-61 208
MS.gene79771.t1 AT4G36380 30.564 337 226 2 40 368 69 405 6.53e-60 203
MS.gene79771.t1 AT2G32440 28.105 459 305 10 9 452 10 458 8.12e-60 204
MS.gene79771.t1 AT2G32440 28.105 459 305 10 9 452 10 458 8.12e-60 204
MS.gene79771.t1 AT5G38970 29.500 400 263 6 10 404 10 395 1.40e-58 199
MS.gene79771.t1 AT3G44970 28.571 455 306 7 35 479 30 475 5.04e-58 199
MS.gene79771.t1 AT1G05160 26.190 462 315 10 34 479 35 486 2.46e-56 195
MS.gene79771.t1 AT1G05160 26.190 462 315 10 34 479 35 486 2.46e-56 195
MS.gene79771.t1 AT1G65670 26.786 448 306 9 13 453 7 439 5.99e-56 194
MS.gene79771.t1 AT4G15300 27.009 448 311 9 10 453 8 443 9.03e-56 193
MS.gene79771.t1 AT1G19630 26.752 471 321 10 22 480 17 475 1.26e-55 193
MS.gene79771.t1 AT4G15300 26.966 445 309 9 13 453 1 433 3.35e-55 191
MS.gene79771.t1 AT4G15396 26.124 467 319 10 4 461 3 452 5.12e-55 191
MS.gene79771.t1 AT4G15393 26.407 462 316 10 12 461 1 450 1.18e-54 190
MS.gene79771.t1 AT2G29090 27.226 393 269 7 93 478 3 385 1.90e-53 185
MS.gene79771.t1 AT1G12740 29.532 342 235 4 35 371 26 366 2.30e-53 184
MS.gene79771.t1 AT4G15396 26.144 459 313 10 4 453 3 444 3.67e-53 186
MS.gene79771.t1 AT5G36110 27.626 438 297 8 29 456 23 450 1.95e-52 184
MS.gene79771.t1 AT1G19630 26.185 443 309 8 22 456 17 449 1.21e-51 181
MS.gene79771.t1 AT1G78490 28.176 433 300 8 35 461 30 457 8.68e-51 180
MS.gene79771.t1 AT5G48000 27.093 454 308 9 38 479 33 475 3.11e-50 178
MS.gene79771.t1 AT5G48000 27.093 454 308 9 38 479 33 475 3.11e-50 178
MS.gene79771.t1 AT5G48000 27.093 454 308 9 38 479 33 475 3.11e-50 178
MS.gene79771.t1 AT5G48000 27.093 454 308 9 38 479 33 475 3.11e-50 178
MS.gene79771.t1 AT5G48000 27.093 454 308 9 38 479 33 475 3.11e-50 178
MS.gene79771.t1 AT5G48000 27.093 454 308 9 38 479 33 475 3.11e-50 178
MS.gene79771.t1 AT2G42850 28.505 428 287 7 40 459 45 461 5.38e-50 178
MS.gene79771.t1 AT5G48000 27.133 457 310 9 35 479 71 516 8.27e-50 178
MS.gene79771.t1 AT4G15396 25.054 467 303 10 4 461 3 431 2.50e-48 173
MS.gene79771.t1 AT4G15300 25.696 467 309 11 13 453 1 455 2.30e-47 171
MS.gene79771.t1 AT4G15310 27.571 457 301 13 11 453 6 446 7.26e-45 164
MS.gene79771.t1 AT4G15396 25.183 409 285 8 4 403 3 399 2.77e-43 158
MS.gene79771.t1 AT4G15393 25.248 404 283 8 12 403 1 397 6.14e-43 157
MS.gene79771.t1 AT3G30290 27.273 385 267 8 78 458 3 378 8.01e-43 157
MS.gene79771.t1 AT1G19630 24.872 390 283 6 22 403 17 404 4.03e-41 153
MS.gene79771.t1 AT1G78490 26.400 375 270 5 35 403 30 404 1.75e-38 145
MS.gene79771.t1 AT4G15393 24.257 404 254 8 12 403 1 364 2.12e-36 138
MS.gene79771.t1 AT5G36110 26.611 357 249 6 29 375 23 376 8.53e-36 137
MS.gene79771.t1 AT2G42850 28.779 344 234 6 40 375 45 385 1.15e-34 134
MS.gene79771.t1 AT2G29090 25.540 278 199 4 39 313 48 320 5.24e-29 117
MS.gene79771.t1 AT5G36140 25.263 285 198 4 40 315 33 311 4.70e-27 111
MS.gene79771.t1 AT1G74550 24.043 470 305 15 12 453 3 448 2.53e-23 103
MS.gene79771.t1 AT3G44970 23.824 319 229 5 35 343 30 344 2.71e-23 101
MS.gene79771.t1 AT3G10560 24.255 470 316 16 17 453 18 480 1.21e-22 101
MS.gene79771.t1 AT2G45550 21.593 477 330 11 11 454 9 474 2.58e-22 100
MS.gene79771.t1 AT4G37430 23.200 500 319 17 12 469 1 477 2.00e-21 97.4
MS.gene79771.t1 AT5G57220 23.319 476 309 18 13 456 4 455 1.57e-20 94.7
MS.gene79771.t1 AT5G04630 21.941 474 334 13 11 453 8 476 6.33e-20 93.2
MS.gene79771.t1 AT4G37400 24.286 420 283 13 65 456 49 461 1.21e-19 92.0
MS.gene79771.t1 AT4G37410 23.844 411 276 13 76 458 62 463 1.80e-19 91.7
MS.gene79771.t1 AT2G45560 20.751 453 311 14 40 457 38 477 1.70e-18 88.6
MS.gene79771.t1 AT5G07990 23.207 474 326 13 11 454 4 469 1.82e-18 88.6
MS.gene79771.t1 AT5G67310 22.803 478 315 16 10 455 15 470 2.17e-18 88.2
MS.gene79771.t1 AT4G37370 26.429 280 176 10 195 459 198 462 2.25e-18 88.2
MS.gene79771.t1 AT1G74540 28.218 202 134 5 257 453 259 454 5.06e-18 87.0
MS.gene79771.t1 AT2G28860 20.190 421 301 13 84 480 79 488 7.67e-18 86.7
MS.gene79771.t1 AT4G15380 28.070 228 154 4 236 458 256 478 1.14e-17 86.3
MS.gene79771.t1 AT2G34490 22.716 405 245 14 118 480 114 492 1.36e-17 85.9
MS.gene79771.t1 AT3G28740 22.951 427 274 14 77 468 74 480 1.39e-17 85.9
MS.gene79771.t1 AT1G11600 21.111 450 313 15 40 453 35 478 4.71e-17 84.3
MS.gene79771.t1 AT3G20950 21.268 489 320 14 11 454 14 482 8.43e-17 83.6
MS.gene79771.t1 AT2G45580 27.128 188 128 4 269 454 141 321 9.76e-17 82.0
MS.gene79771.t1 AT3G26270 23.504 468 309 19 26 458 20 473 1.22e-16 82.8
MS.gene79771.t1 AT2G45580 27.128 188 128 4 269 454 295 475 1.81e-16 82.4
MS.gene79771.t1 AT2G46660 21.542 441 310 13 38 453 68 497 1.90e-16 82.4
MS.gene79771.t1 AT2G45570 20.941 425 296 9 64 454 57 475 2.05e-16 82.0
MS.gene79771.t1 AT2G28850 19.906 427 295 13 84 480 79 488 2.57e-16 81.6
MS.gene79771.t1 AT4G37360 28.042 189 125 4 274 461 287 465 2.82e-16 81.6
MS.gene79771.t1 AT1G31800 20.136 442 315 13 71 480 134 569 3.55e-16 81.6
MS.gene79771.t1 AT2G40890 21.784 482 319 17 8 453 2 461 4.32e-16 81.3
MS.gene79771.t1 AT3G25180 21.814 463 288 15 72 482 68 508 4.82e-16 80.9
MS.gene79771.t1 AT4G12300 21.414 481 315 15 15 454 20 478 6.54e-16 80.5
MS.gene79771.t1 AT2G42250 28.022 182 124 3 280 456 303 482 8.42e-16 80.5
MS.gene79771.t1 AT2G26710 21.800 500 323 17 3 451 2 484 1.07e-15 80.1
MS.gene79771.t1 AT4G37310 20.619 485 328 13 11 455 4 471 1.49e-15 79.7
MS.gene79771.t1 AT1G33730 28.421 190 126 5 268 454 156 338 1.87e-15 78.2
MS.gene79771.t1 AT1G33730 28.421 190 126 5 268 454 156 338 1.87e-15 78.2
MS.gene79771.t1 AT1G66540 26.178 191 130 4 274 463 115 295 2.20e-15 77.8
MS.gene79771.t1 AT3G26170 30.570 193 120 6 269 454 283 468 2.41e-15 79.0
MS.gene79771.t1 AT5G04660 21.531 418 293 10 67 453 66 479 2.88e-15 78.6
MS.gene79771.t1 AT5G25140 19.669 483 325 14 9 454 4 460 3.30e-15 78.6
MS.gene79771.t1 AT4G13770 20.485 454 321 11 14 436 4 448 3.45e-15 78.2
MS.gene79771.t1 AT3G48300 21.030 466 307 20 29 459 19 458 3.76e-15 78.2
MS.gene79771.t1 AT3G48300 21.030 466 307 20 29 459 21 460 3.78e-15 78.2
MS.gene79771.t1 AT1G66540 26.178 191 130 4 274 463 174 354 4.01e-15 77.4
MS.gene79771.t1 AT3G48320 22.661 481 300 21 10 454 12 456 4.35e-15 78.2
MS.gene79771.t1 AT3G26180 26.667 255 153 9 203 454 111 334 4.36e-15 77.0
MS.gene79771.t1 AT4G37340 23.932 234 160 6 236 461 242 465 4.89e-15 77.8
MS.gene79771.t1 AT5G25180 22.642 477 296 17 22 454 13 460 5.78e-15 77.8
MS.gene79771.t1 AT3G26230 28.342 187 130 2 275 460 289 472 6.18e-15 77.4
MS.gene79771.t1 AT4G36220 26.087 184 130 3 272 454 304 482 1.24e-14 76.6
MS.gene79771.t1 AT3G20090 25.668 187 136 2 269 454 157 341 1.27e-14 75.9
MS.gene79771.t1 AT4G15360 25.269 186 135 3 277 462 301 482 1.32e-14 76.6
MS.gene79771.t1 AT3G20120 23.529 187 139 2 269 453 156 340 1.48e-14 75.5
MS.gene79771.t1 AT3G20120 23.529 187 139 2 269 453 156 340 1.48e-14 75.5
MS.gene79771.t1 AT3G20120 23.529 187 139 2 269 453 156 340 1.48e-14 75.5
MS.gene79771.t1 AT5G04330 27.624 181 116 4 275 447 295 468 1.49e-14 76.3
MS.gene79771.t1 AT3G48280 20.158 506 333 22 10 475 1 475 1.70e-14 76.3
MS.gene79771.t1 AT3G20080 26.455 189 134 3 277 463 165 350 1.94e-14 75.5
MS.gene79771.t1 AT3G20080 26.455 189 134 3 277 463 165 350 1.94e-14 75.5
MS.gene79771.t1 AT3G20080 26.455 189 134 3 277 463 165 350 1.94e-14 75.5
MS.gene79771.t1 AT3G20080 26.455 189 134 3 277 463 165 350 1.94e-14 75.5
MS.gene79771.t1 AT3G01900 21.522 460 307 17 54 480 52 490 2.29e-14 75.9
MS.gene79771.t1 AT5G36130 30.496 141 89 3 337 475 1 134 2.30e-14 70.5
MS.gene79771.t1 AT5G10600 26.667 195 133 4 274 466 302 488 2.50e-14 75.9
MS.gene79771.t1 AT2G14100 25.269 186 137 1 269 454 294 477 2.79e-14 75.5
MS.gene79771.t1 AT3G20935 26.590 173 123 2 284 454 134 304 3.08e-14 74.3
MS.gene79771.t1 AT4G31950 32.558 172 107 5 282 447 304 472 3.62e-14 75.1
MS.gene79771.t1 AT3G20090 25.668 187 136 2 269 454 295 479 3.69e-14 75.1
MS.gene79771.t1 AT3G26180 26.772 254 152 9 204 454 246 468 3.72e-14 75.1
MS.gene79771.t1 AT3G20120 23.590 195 144 3 269 461 292 483 3.73e-14 75.1
MS.gene79771.t1 AT3G32047 24.121 199 148 2 269 467 292 487 3.86e-14 75.1
MS.gene79771.t1 AT3G20960 26.966 178 127 2 277 453 198 373 3.98e-14 74.7
MS.gene79771.t1 AT5G10610 27.500 200 135 5 268 465 280 471 4.46e-14 74.7
MS.gene79771.t1 AT2G27010 25.541 231 163 4 236 462 236 461 4.64e-14 74.7
MS.gene79771.t1 AT5G35715 25.368 272 184 8 190 447 134 400 4.74e-14 74.7
MS.gene79771.t1 AT3G20080 26.596 188 133 3 277 462 302 486 4.97e-14 74.7
MS.gene79771.t1 AT3G20080 26.596 188 133 3 277 462 302 486 4.97e-14 74.7
MS.gene79771.t1 AT3G10570 20.286 419 296 11 67 453 68 480 5.55e-14 74.7
MS.gene79771.t1 AT5G09970 25.551 227 158 5 237 455 283 506 5.83e-14 74.7
MS.gene79771.t1 AT3G20960 24.775 222 158 4 236 453 260 476 5.96e-14 74.7
MS.gene79771.t1 AT3G26150 30.601 183 118 5 275 454 292 468 7.05e-14 74.3
MS.gene79771.t1 AT5G25120 19.583 480 329 16 9 454 4 460 7.66e-14 73.9
MS.gene79771.t1 AT1G33720 20.742 458 321 9 29 454 27 474 7.73e-14 74.3
MS.gene79771.t1 AT5G42580 25.556 180 130 2 277 454 286 463 8.43e-14 73.9
MS.gene79771.t1 AT4G31940 30.366 191 122 6 264 447 298 484 1.76e-13 73.2
MS.gene79771.t1 AT1G33720 26.064 188 133 3 268 454 160 342 2.04e-13 72.0
MS.gene79771.t1 AT1G33720 26.064 188 133 3 268 454 160 342 2.04e-13 72.0
MS.gene79771.t1 AT1G33720 26.064 188 133 3 268 454 160 342 2.04e-13 72.0
MS.gene79771.t1 AT3G20940 23.889 180 133 2 277 454 302 479 2.08e-13 72.8
MS.gene79771.t1 AT5G06905 19.748 476 328 13 40 473 31 494 2.59e-13 72.4
MS.gene79771.t1 AT2G30770 23.210 461 278 17 40 454 33 463 2.87e-13 72.4
MS.gene79771.t1 AT3G26160 29.268 164 109 4 275 436 292 450 3.12e-13 72.4
MS.gene79771.t1 AT4G37330 27.411 197 126 5 267 459 277 460 4.74e-13 71.6
MS.gene79771.t1 AT2G34500 21.708 281 197 7 215 480 215 487 7.77e-13 70.9
MS.gene79771.t1 AT5G24900 27.273 176 121 3 277 451 210 379 8.31e-13 70.5
MS.gene79771.t1 AT3G48310 20.430 465 308 18 29 458 23 460 1.05e-12 70.5
MS.gene79771.t1 AT3G20100 25.000 188 137 2 269 454 293 478 1.10e-12 70.5
MS.gene79771.t1 AT1G28430 24.107 224 163 3 236 454 255 476 1.11e-12 70.5
MS.gene79771.t1 AT5G24900 27.273 176 121 3 277 451 327 496 1.50e-12 70.1
MS.gene79771.t1 AT5G24910 26.705 176 122 3 277 451 332 501 1.84e-12 70.1
MS.gene79771.t1 AT4G13290 24.306 288 189 12 180 454 186 457 2.26e-12 69.3
MS.gene79771.t1 AT1G24540 20.909 440 298 16 86 480 86 520 2.39e-12 69.7
MS.gene79771.t1 AT3G61040 25.243 206 142 4 256 454 263 463 2.94e-12 69.3
MS.gene79771.t1 AT1G64930 24.607 191 142 2 268 457 292 481 3.77e-12 68.9
MS.gene79771.t1 AT1G13110 21.721 488 316 20 11 453 3 469 4.32e-12 68.6
MS.gene79771.t1 AT1G13080 24.172 302 185 11 180 453 64 349 6.56e-12 67.4
MS.gene79771.t1 AT2G25160 25.758 198 132 6 262 447 285 479 1.40e-11 67.0
MS.gene79771.t1 AT1G13080 24.172 302 185 11 180 453 182 467 1.94e-11 66.6
MS.gene79771.t1 AT3G26830 24.510 204 138 6 275 474 288 479 2.01e-11 66.6
MS.gene79771.t1 AT2G23190 26.425 193 131 4 268 459 325 507 2.16e-11 66.6
MS.gene79771.t1 AT3G56630 20.741 405 263 16 90 449 77 468 2.92e-11 65.9
MS.gene79771.t1 AT3G61880 21.719 442 304 15 42 453 68 497 3.42e-11 65.9
MS.gene79771.t1 AT5G06900 24.696 247 165 5 234 467 244 482 3.83e-11 65.9
MS.gene79771.t1 AT3G61880 21.591 440 307 14 42 453 68 497 4.29e-11 65.5
MS.gene79771.t1 AT2G12190 23.438 256 177 5 238 481 252 500 4.52e-11 65.5
MS.gene79771.t1 AT5G24950 28.492 179 119 6 280 454 290 463 4.92e-11 65.5
MS.gene79771.t1 AT3G14620 27.064 218 143 8 236 444 267 477 7.31e-11 64.7
MS.gene79771.t1 AT5G42590 22.073 521 319 21 11 480 3 487 7.52e-11 64.7

Find 84 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAATCTCTAAAAGATTT+TGG 0.137226 6.4:+47446242 None:intergenic
TTAATGGTTAATCAACTATT+AGG 0.158968 6.4:-47445910 MS.gene79771:CDS
CATGCAGCCTATTTGGAAAA+TGG 0.161543 6.4:-47446340 MS.gene79771:CDS
ATTACTTTGTTACAAATTAT+AGG 0.221777 6.4:-47443413 MS.gene79771:intron
TCACTTACACATTGAGTAAA+TGG 0.222600 6.4:+47444668 None:intergenic
TAATGGTTAATCAACTATTA+GGG 0.224645 6.4:-47445909 MS.gene79771:CDS
GCAGGTAGCTATAAATTTAA+TGG 0.250391 6.4:-47445926 MS.gene79771:intron
CCTCCAAAGGGTGCATAAAA+TGG 0.261752 6.4:+47443495 None:intergenic
TTATCAAGGAAAAGAGAAAT+TGG 0.273450 6.4:-47443527 MS.gene79771:intron
TAATGCCATGGAACAGCTTC+TGG 0.299807 6.4:-47444887 MS.gene79771:intron
GACTTGGTGGCATTGCAATT+TGG 0.310036 6.4:-47444460 MS.gene79771:CDS
TCCTCAATTTGTTGAAGAAA+TGG 0.332131 6.4:-47446848 MS.gene79771:CDS
TTTGTATATCATTCATGAAA+TGG 0.354787 6.4:+47446126 None:intergenic
AAAGGCCAACCTCTCCTTCC+TGG 0.360202 6.4:+47446919 None:intergenic
CTTATCTAATCGCATCATAT+TGG 0.360450 6.4:+47446157 None:intergenic
GGAACCACAAAACATCCTTT+TGG 0.377881 6.4:+47443722 None:intergenic
CTTGGAGAAGAATGACTTGT+TGG 0.378677 6.4:+47446069 None:intergenic
CCCTCAGCTCGGTTAGTGAA+TGG 0.382876 6.4:-47443053 MS.gene79771:CDS
TTCTCTTGGACAGGATGAAC+AGG 0.393722 6.4:-47444750 MS.gene79771:intron
AGGAGAGGTTGGCCTTTGAT+AGG 0.397236 6.4:-47446913 MS.gene79771:CDS
GGAAACAAATGAAGGAAGAT+AGG 0.406930 6.4:-47443088 MS.gene79771:CDS
TTACCTTTCTACAAACATCT+TGG 0.410837 6.4:+47446051 None:intergenic
AAATGAACTGCTGAGAGAAA+TGG 0.418616 6.4:+47443701 None:intergenic
AGAAGCTGTTCCATGGCATT+AGG 0.421157 6.4:+47444889 None:intergenic
TCTCCAAGATGTTTGTAGAA+AGG 0.429524 6.4:-47446054 MS.gene79771:intron
ATGCAGCCTATTTGGAAAAT+GGG 0.433237 6.4:-47446339 MS.gene79771:CDS
ACCATTTCTTCAACAAATTG+AGG 0.439675 6.4:+47446847 None:intergenic
CCTCCAACAGAAGGTAATAA+TGG 0.446668 6.4:-47445048 MS.gene79771:CDS
ATAGAGGTCCAAAGACAAAA+TGG 0.452346 6.4:-47445072 MS.gene79771:CDS
CCATTATTACCTTCTGTTGG+AGG 0.456644 6.4:+47445048 None:intergenic
AATGGTGTGATTACAGTTCA+AGG 0.481999 6.4:-47446212 MS.gene79771:CDS
AAAATTTCAATCCTTGGAGA+TGG 0.483860 6.4:-47443652 MS.gene79771:CDS
TTCATACCACACTGCTATGA+AGG 0.485579 6.4:-47445794 MS.gene79771:intron
AAGTCTGCAACAGCATCATC+TGG 0.488461 6.4:+47444991 None:intergenic
CTAGAGAAGAATTTCTTACA+TGG 0.490311 6.4:-47444709 MS.gene79771:CDS
AGGATGAACAGGATTCTCTA+AGG 0.491747 6.4:-47444739 MS.gene79771:CDS
ACACCATTATTACCTTCTGT+TGG 0.494158 6.4:+47445045 None:intergenic
GAAGGTAATAATGGTGTACT+TGG 0.498281 6.4:-47445039 MS.gene79771:CDS
TGATAGGTGACAGTATCAAT+TGG 0.505310 6.4:-47446897 MS.gene79771:CDS
TGAAGAGCCAGGGATGTTGA+TGG 0.506248 6.4:+47445813 None:intergenic
TTTCAATCCTTGGAGATGGA+TGG 0.506285 6.4:-47443648 MS.gene79771:CDS
AGAAGAATTTCTTACATGGC+AGG 0.507087 6.4:-47444705 MS.gene79771:CDS
CGAGTCTCAAGTGAATGAAA+TGG 0.507305 6.4:-47445878 MS.gene79771:CDS
AAGTAATTCAAATCAAGAAA+AGG 0.511104 6.4:-47446972 MS.gene79771:CDS
TGGCATTAGGACATTGAGTA+AGG 0.511964 6.4:+47444902 None:intergenic
TACTCAATGTCCTAATGCCA+TGG 0.528632 6.4:-47444899 MS.gene79771:CDS
TGCCACCAGGAAGGAGAGGT+TGG 0.529134 6.4:-47446924 MS.gene79771:CDS
GATGAAACACTTAGACTTGG+TGG 0.531512 6.4:-47444473 MS.gene79771:CDS
AGCAGTTCATTTAGATGAGA+AGG 0.532092 6.4:-47443690 MS.gene79771:CDS
TCCGTTCCCATCAACATCCC+TGG 0.534317 6.4:-47445820 MS.gene79771:CDS
GCAGTGTGGTATGAAGAGCC+AGG 0.536000 6.4:+47445802 None:intergenic
TGTACTTGGAAGACTAATAG+AGG 0.536543 6.4:-47445025 MS.gene79771:CDS
AGGAAGGAAGAGAAAAGCAT+AGG 0.545599 6.4:-47446952 MS.gene79771:CDS
AAATCTAGCACCTCCTCCAA+AGG 0.546715 6.4:+47443482 None:intergenic
ATGGATGGAACCTGAAAATG+AGG 0.553125 6.4:-47443633 MS.gene79771:intron
CAACAGATGGAAACAAATGA+AGG 0.553269 6.4:-47443096 MS.gene79771:intron
GAGAAAATATTTCAGAAACA+TGG 0.568818 6.4:-47447038 MS.gene79771:CDS
AATCTAGCACCTCCTCCAAA+GGG 0.570397 6.4:+47443483 None:intergenic
CCATTCACTAACCGAGCTGA+GGG 0.577408 6.4:+47443053 None:intergenic
CAGTTCAAGGAGAGCAACAA+AGG 0.577934 6.4:-47446199 MS.gene79771:CDS
TCAGGTTCCATCCATCTCCA+AGG 0.578285 6.4:+47443641 None:intergenic
GCCAGGGATGTTGATGGGAA+CGG 0.581255 6.4:+47445819 None:intergenic
AGGCGAGCTAGCTCAGCTCC+AGG 0.584667 6.4:+47443456 None:intergenic
GAAGAGCCAGGGATGTTGAT+GGG 0.585544 6.4:+47445814 None:intergenic
GCCATTCACTAACCGAGCTG+AGG 0.588963 6.4:+47443052 None:intergenic
ACATACCAGAAGCTGTTCCA+TGG 0.591583 6.4:+47444882 None:intergenic
CAAAATGGTCCTCCAACAGA+AGG 0.598360 6.4:-47445057 MS.gene79771:CDS
AGATTGCCACCAGGAAGGAG+AGG 0.600467 6.4:-47446928 MS.gene79771:CDS
ATTACAAAACGATTGAAGCT+CGG 0.600491 6.4:+47446299 None:intergenic
GAGCAACAAAGGAAACTACA+TGG 0.605256 6.4:-47446188 MS.gene79771:CDS
TTGATACTGTCACCTATCAA+AGG 0.616128 6.4:+47446901 None:intergenic
ATTTCTTCAACAAATTGAGG+AGG 0.616451 6.4:+47446850 None:intergenic
CCTATTTGGAAAATGGGCAG+TGG 0.617335 6.4:-47446333 MS.gene79771:CDS
ATTGATGAAACACTTAGACT+TGG 0.618756 6.4:-47444476 MS.gene79771:CDS
TAAAATAAACAAGATCATAG+AGG 0.623444 6.4:-47445088 MS.gene79771:CDS
AATTCAAATCAAGAAAAGGA+AGG 0.625285 6.4:-47446968 MS.gene79771:CDS
TAGGAAGATTGCCACCAGGA+AGG 0.629546 6.4:-47446933 MS.gene79771:CDS
CAGTGTGGTATGAAGAGCCA+GGG 0.630530 6.4:+47445803 None:intergenic
TTGTTGAAGAAATGGTGCAA+AGG 0.636433 6.4:-47446840 MS.gene79771:intron
AATGGTTAATCAACTATTAG+GGG 0.636873 6.4:-47445908 MS.gene79771:CDS
AGCATAGGAAGATTGCCACC+AGG 0.646312 6.4:-47446937 MS.gene79771:CDS
AAAGAAGACATTCAATACCA+AGG 0.657807 6.4:-47444422 MS.gene79771:intron
GGCCAACCTCTCCTTCCTGG+TGG 0.718998 6.4:+47446922 None:intergenic
ATCGTACCTTCATAGCAGTG+TGG 0.752782 6.4:+47445788 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTATAATATTAATC+AGG + chr6.4:47446123-47446142 None:intergenic 10.0%
!! ATTTGATTAAATATACAATT+TGG - chr6.4:47443248-47443267 MS.gene79771:intron 10.0%
!! TAATGAGTAAATATATAATT+TGG + chr6.4:47446205-47446224 None:intergenic 10.0%
!!! ATTTTGAAATATTAATAATG+TGG - chr6.4:47446150-47446169 MS.gene79771:CDS 10.0%
!! AATATGTAGTTAATTATGTT+TGG + chr6.4:47446806-47446825 None:intergenic 15.0%
!! ATTACTTTGTTACAAATTAT+AGG - chr6.4:47446633-47446652 MS.gene79771:intron 15.0%
!! TAATTAACTACATATTAGAT+CGG - chr6.4:47446810-47446829 MS.gene79771:intron 15.0%
!!! AATTTTTTCCTTAATTGTTA+TGG - chr6.4:47446490-47446509 MS.gene79771:intron 15.0%
!!! GCAATTTTAAAGATAATTTT+GGG - chr6.4:47443342-47443361 MS.gene79771:intron 15.0%
!!! TAAATTGATTTTCCTTATTT+AGG - chr6.4:47445204-47445223 MS.gene79771:intron 15.0%
!!! TGCAATTTTAAAGATAATTT+TGG - chr6.4:47443341-47443360 MS.gene79771:intron 15.0%
!! AAGTAATTCAAATCAAGAAA+AGG - chr6.4:47443074-47443093 MS.gene79771:CDS 20.0%
!! ACGTGTTAATTAAATTACTT+AGG - chr6.4:47444861-47444880 MS.gene79771:intron 20.0%
!! ATTTCTATTTCGTAAATTTG+AGG + chr6.4:47444587-47444606 None:intergenic 20.0%
!! TAAAATAAACAAGATCATAG+AGG - chr6.4:47444958-47444977 MS.gene79771:CDS 20.0%
!! TAATGGTTAATCAACTATTA+GGG - chr6.4:47444137-47444156 MS.gene79771:intron 20.0%
!! TCTTTGATTGTTATGTTAAT+CGG - chr6.4:47444799-47444818 MS.gene79771:intron 20.0%
!! TTAATCGGTTAATCTTATAA+GGG - chr6.4:47444814-47444833 MS.gene79771:intron 20.0%
!! TTAATGGTTAATCAACTATT+AGG - chr6.4:47444136-47444155 MS.gene79771:intron 20.0%
!! TTATACTTGCATATACTAAT+AGG + chr6.4:47445802-47445821 None:intergenic 20.0%
!! TTATTCACTAAAATGTTATG+TGG + chr6.4:47446444-47446463 None:intergenic 20.0%
!! TTGAAATATTAATAATGTGG+AGG - chr6.4:47446153-47446172 MS.gene79771:CDS 20.0%
!! TTGTATAATATTAATCAGGT+CGG + chr6.4:47446119-47446138 None:intergenic 20.0%
!! TTTGTATATCATTCATGAAA+TGG + chr6.4:47443923-47443942 None:intergenic 20.0%
!!! TTATCATTTTGAAATGTTGT+TGG + chr6.4:47445924-47445943 None:intergenic 20.0%
! AAATGAGACCATAACAATTA+AGG + chr6.4:47446501-47446520 None:intergenic 25.0%
! AAATGCTGTTAGAAAGTAAA+TGG + chr6.4:47444025-47444044 None:intergenic 25.0%
! AAGCTAAAAATTTCAATCCT+TGG - chr6.4:47446388-47446407 MS.gene79771:intron 25.0%
! AATGGTTAATCAACTATTAG+GGG - chr6.4:47444138-47444157 MS.gene79771:intron 25.0%
! AATTCAAATCAAGAAAAGGA+AGG - chr6.4:47443078-47443097 MS.gene79771:CDS 25.0%
! ACATGAATGAATATCCAATT+TGG - chr6.4:47445860-47445879 MS.gene79771:CDS 25.0%
! ATGTAGTTAATTATGTTTGG+TGG + chr6.4:47446803-47446822 None:intergenic 25.0%
! ATTCTAACCATTGTTTATAG+AGG - chr6.4:47443463-47443482 MS.gene79771:CDS 25.0%
! ATTTCTGCATATAATTCTCT+TGG - chr6.4:47445282-47445301 MS.gene79771:intron 25.0%
! CTACTCTCTTTATATATCAT+TGG + chr6.4:47444299-47444318 None:intergenic 25.0%
! GAACTATAATGACATTATGT+TGG - chr6.4:47445996-47446015 MS.gene79771:intron 25.0%
! GAGAAAATATTTCAGAAACA+TGG - chr6.4:47443008-47443027 MS.gene79771:CDS 25.0%
! GTAAATCATTCAAACATGTT+AGG + chr6.4:47446931-47446950 None:intergenic 25.0%
! GTCAATAATCAACATATTAG+TGG + chr6.4:47445709-47445728 None:intergenic 25.0%
! GTTAATCGGTTAATCTTATA+AGG - chr6.4:47444813-47444832 MS.gene79771:intron 25.0%
! TAAATTGATCCTACAATTTC+AGG - chr6.4:47446178-47446197 MS.gene79771:CDS 25.0%
! TAACAGATAAATCTTCCATT+TGG - chr6.4:47443661-47443680 MS.gene79771:CDS 25.0%
! TCAATATGTAACTCTTTCAT+TGG - chr6.4:47444719-47444738 MS.gene79771:CDS 25.0%
! TCTCAAATTATTAACGATGT+CGG + chr6.4:47446745-47446764 None:intergenic 25.0%
! TCTCTTAAATAAATCAATGC+TGG - chr6.4:47444611-47444630 MS.gene79771:intron 25.0%
! TGAAACTAAGAGAATAATGT+CGG - chr6.4:47446044-47446063 MS.gene79771:intron 25.0%
! TTATCAAGGAAAAGAGAAAT+TGG - chr6.4:47446519-47446538 MS.gene79771:intron 25.0%
! TTCAAGTACTTCATATAAGA+TGG + chr6.4:47444437-47444456 None:intergenic 25.0%
! TTCTAACCATTGTTTATAGA+GGG - chr6.4:47443464-47443483 MS.gene79771:CDS 25.0%
! TTTGAATGATTTACAACAGA+TGG - chr6.4:47446937-47446956 MS.gene79771:CDS 25.0%
!! AATTTAGTACCACAGTTTTA+AGG - chr6.4:47444654-47444673 MS.gene79771:intron 25.0%
!! CATCGTTAATAATTTGAGAT+CGG - chr6.4:47446746-47446765 MS.gene79771:intron 25.0%
!! GTGTAAGTGATTAACATTTT+TGG - chr6.4:47445391-47445410 MS.gene79771:intron 25.0%
!! TGGTTAGAATGATTTTTACA+AGG + chr6.4:47443453-47443472 None:intergenic 25.0%
!!! AAATCTTTTAGAGATTTGGT+TGG - chr6.4:47443807-47443826 MS.gene79771:intron 25.0%
!!! ACCAAATCTCTAAAAGATTT+TGG + chr6.4:47443807-47443826 None:intergenic 25.0%
!!! GAAATTAGTAAGAAAGCATT+AGG + chr6.4:47445267-47445286 None:intergenic 25.0%
!!! TCCAAAATCTTTTAGAGATT+TGG - chr6.4:47443803-47443822 MS.gene79771:intron 25.0%
!!! TGAAATATTGATAATGTGTG+AGG + chr6.4:47443305-47443324 None:intergenic 25.0%
AAAATCGACAGTAATTTGGA+TGG + chr6.4:47446842-47446861 None:intergenic 30.0%
AAAATTTCAATCCTTGGAGA+TGG - chr6.4:47446394-47446413 MS.gene79771:intron 30.0%
AAACTAAGAGAATAATGTCG+GGG - chr6.4:47446046-47446065 MS.gene79771:intron 30.0%
AAAGAAGACATTCAATACCA+AGG - chr6.4:47445624-47445643 MS.gene79771:intron 30.0%
AATCAAAGAATCAGCATTTC+AGG + chr6.4:47444788-47444807 None:intergenic 30.0%
ACAATGAAACCTTAACAAAC+TGG + chr6.4:47445532-47445551 None:intergenic 30.0%
ACCATTTCTTCAACAAATTG+AGG + chr6.4:47443202-47443221 None:intergenic 30.0%
ATCATTCAAACATGTTAGGT+AGG + chr6.4:47446927-47446946 None:intergenic 30.0%
ATGTGTACATGATTTAATGC+AGG - chr6.4:47444102-47444121 MS.gene79771:intron 30.0%
ATTAAGTAGCTTAACTATGC+AGG + chr6.4:47445231-47445250 None:intergenic 30.0%
ATTACAAAACGATTGAAGCT+CGG + chr6.4:47443750-47443769 None:intergenic 30.0%
ATTGATGAAACACTTAGACT+TGG - chr6.4:47445570-47445589 MS.gene79771:intron 30.0%
ATTTCTTCAACAAATTGAGG+AGG + chr6.4:47443199-47443218 None:intergenic 30.0%
CAACAAAATCGACAGTAATT+TGG + chr6.4:47446846-47446865 None:intergenic 30.0%
CAATTTGGTCATGAAAATGT+TGG - chr6.4:47445875-47445894 MS.gene79771:CDS 30.0%
CTAGAGAAGAATTTCTTACA+TGG - chr6.4:47445337-47445356 MS.gene79771:intron 30.0%
CTTATCTAATCGCATCATAT+TGG + chr6.4:47443892-47443911 None:intergenic 30.0%
GAAAAATCTGTGCCTAATTA+TGG + chr6.4:47444487-47444506 None:intergenic 30.0%
GAAACTAAGAGAATAATGTC+GGG - chr6.4:47446045-47446064 MS.gene79771:intron 30.0%
GAAGAAAAAGAGCAATTTGA+AGG + chr6.4:47446613-47446632 None:intergenic 30.0%
GATACAGTTCTATACTTTCA+AGG - chr6.4:47443392-47443411 MS.gene79771:intron 30.0%
GATATTGATGTGACATTCTT+TGG - chr6.4:47444908-47444927 MS.gene79771:CDS 30.0%
GCAGGTAGCTATAAATTTAA+TGG - chr6.4:47444120-47444139 MS.gene79771:intron 30.0%
GTGCTTAAAATTGTAAGAGT+TGG - chr6.4:47444550-47444569 MS.gene79771:intron 30.0%
GTGGTACTAAATTCAGAAAA+AGG + chr6.4:47444647-47444666 None:intergenic 30.0%
TAATTTGGTCCTGAAATTGT+AGG + chr6.4:47446190-47446209 None:intergenic 30.0%
TCACTTACACATTGAGTAAA+TGG + chr6.4:47445381-47445400 None:intergenic 30.0%
TCATATAAGATGGTTCTTGA+AGG + chr6.4:47444427-47444446 None:intergenic 30.0%
TGATACAACTCTACAATTTC+AGG + chr6.4:47443275-47443294 None:intergenic 30.0%
TGTGACATTCTTTGGATATT+AGG - chr6.4:47444916-47444935 MS.gene79771:CDS 30.0%
TGTTATGGTCTCATTTATCA+AGG - chr6.4:47446505-47446524 MS.gene79771:intron 30.0%
TTACCTTTCTACAAACATCT+TGG + chr6.4:47443998-47444017 None:intergenic 30.0%
TTGCCAAATAGAGATTATAG+CGG - chr6.4:47443563-47443582 MS.gene79771:intron 30.0%
TTTATACTCATAGCATATCG+CGG + chr6.4:47443540-47443559 None:intergenic 30.0%
! ATAAATCTTCCATTTGGCTT+AGG - chr6.4:47443667-47443686 MS.gene79771:CDS 30.0%
! ATATTTTCATGCAGCCTATT+TGG - chr6.4:47443699-47443718 MS.gene79771:CDS 30.0%
! ATCATCAATCTTCTTTTTGC+TGG - chr6.4:47445079-47445098 MS.gene79771:CDS 30.0%
! CAACATTTTCATGACCAAAT+TGG + chr6.4:47445877-47445896 None:intergenic 30.0%
! CGTTTTGTAATGCAAAATGA+AGG - chr6.4:47443759-47443778 MS.gene79771:intron 30.0%
! TATACCAAAAGGATGTTTTG+TGG - chr6.4:47446320-47446339 MS.gene79771:CDS 30.0%
! TTGTTTTCTGATTTTGTCGA+TGG - chr6.4:47444196-47444215 MS.gene79771:intron 30.0%
! TTTGAAATGTTGTTGGTGTA+GGG + chr6.4:47445917-47445936 None:intergenic 30.0%
!! ACAAAAGAGTGTTAAGAAGT+TGG - chr6.4:47444334-47444353 MS.gene79771:intron 30.0%
!! AGAGATTTGGTTGGTAAAAA+TGG - chr6.4:47443816-47443835 MS.gene79771:intron 30.0%
!! AGGACTAATTTGATAATGCA+AGG - chr6.4:47443412-47443431 MS.gene79771:intron 30.0%
!! GCAGATTTTGTTATACCAAA+AGG - chr6.4:47446309-47446328 MS.gene79771:CDS 30.0%
!! TCCTCAATTTGTTGAAGAAA+TGG - chr6.4:47443198-47443217 MS.gene79771:intron 30.0%
!!! TTTTGAAATGTTGTTGGTGT+AGG + chr6.4:47445918-47445937 None:intergenic 30.0%
AAATGAACTGCTGAGAGAAA+TGG + chr6.4:47446348-47446367 None:intergenic 35.0%
AACCATTGTTTATAGAGGGA+GGG - chr6.4:47443468-47443487 MS.gene79771:CDS 35.0%
AACTATGCAGGACCTAAATA+AGG + chr6.4:47445219-47445238 None:intergenic 35.0%
AATGGTGTGATTACAGTTCA+AGG - chr6.4:47443834-47443853 MS.gene79771:intron 35.0%
ACACCATTATTACCTTCTGT+TGG + chr6.4:47445004-47445023 None:intergenic 35.0%
ACTCTCAAAATTGTGTACCT+TGG + chr6.4:47445644-47445663 None:intergenic 35.0%
AGAAGAATTTCTTACATGGC+AGG - chr6.4:47445341-47445360 MS.gene79771:intron 35.0%
AGCAGTTCATTTAGATGAGA+AGG - chr6.4:47446356-47446375 MS.gene79771:CDS 35.0%
AGCATAGAACCTTAAAACTG+TGG + chr6.4:47444666-47444685 None:intergenic 35.0%
ATAGAGGTCCAAAGACAAAA+TGG - chr6.4:47444974-47444993 MS.gene79771:CDS 35.0%
ATGCAGCCTATTTGGAAAAT+GGG - chr6.4:47443707-47443726 MS.gene79771:CDS 35.0%
CAACAGATGGAAACAAATGA+AGG - chr6.4:47446950-47446969 MS.gene79771:CDS 35.0%
GAAGGTAATAATGGTGTACT+TGG - chr6.4:47445007-47445026 MS.gene79771:CDS 35.0%
GGAAACAAATGAAGGAAGAT+AGG - chr6.4:47446958-47446977 MS.gene79771:CDS 35.0%
TAACACTGCAAGCCATAATT+AGG - chr6.4:47444472-47444491 MS.gene79771:CDS 35.0%
TAACCATTGTTTATAGAGGG+AGG - chr6.4:47443467-47443486 MS.gene79771:CDS 35.0%
TCAACTACAAGTCATACAAG+TGG + chr6.4:47446882-47446901 None:intergenic 35.0%
TCTCCAAGATGTTTGTAGAA+AGG - chr6.4:47443992-47444011 MS.gene79771:intron 35.0%
TGATAGGTGACAGTATCAAT+TGG - chr6.4:47443149-47443168 MS.gene79771:intron 35.0%
TGCATATAATTCTCTTGGAC+AGG - chr6.4:47445287-47445306 MS.gene79771:intron 35.0%
TGTACTTGGAAGACTAATAG+AGG - chr6.4:47445021-47445040 MS.gene79771:CDS 35.0%
TTGATACTGTCACCTATCAA+AGG + chr6.4:47443148-47443167 None:intergenic 35.0%
TTGTTGAAGAAATGGTGCAA+AGG - chr6.4:47443206-47443225 MS.gene79771:intron 35.0%
TTTCATCAATGACCTGTTAG+TGG + chr6.4:47445560-47445579 None:intergenic 35.0%
! CGTTAATAATTTGAGATCGG+TGG - chr6.4:47446749-47446768 MS.gene79771:intron 35.0%
! CTTGTATGACTTGTAGTTGA+AGG - chr6.4:47446882-47446901 MS.gene79771:CDS 35.0%
!! AAGGTACACAATTTTGAGAG+TGG - chr6.4:47445643-47445662 MS.gene79771:intron 35.0%
!! GCTTGCAGTGTTATTTGAAA+TGG + chr6.4:47444465-47444484 None:intergenic 35.0%
!! TACACAATTTTGAGAGTGGT+TGG - chr6.4:47445647-47445666 MS.gene79771:intron 35.0%
!! TGTGGATTAACCTCATTTTC+AGG + chr6.4:47446426-47446445 None:intergenic 35.0%
!!! GACTGCAAAAAGCATTGTTT+TGG + chr6.4:47445119-47445138 None:intergenic 35.0%
!!! TGCAAAAAGCATTGTTTTGG+TGG + chr6.4:47445116-47445135 None:intergenic 35.0%
AATCAGATTCGTCTCTCCAT+TGG - chr6.4:47445962-47445981 MS.gene79771:intron 40.0%
AGAAAACAGCGTTGTGATTG+TGG + chr6.4:47443642-47443661 None:intergenic 40.0%
AGGATGAACAGGATTCTCTA+AGG - chr6.4:47445307-47445326 MS.gene79771:intron 40.0%
ATGGATGGAACCTGAAAATG+AGG - chr6.4:47446413-47446432 MS.gene79771:intron 40.0%
CATGCAGCCTATTTGGAAAA+TGG - chr6.4:47443706-47443725 MS.gene79771:CDS 40.0%
CCATTATTACCTTCTGTTGG+AGG + chr6.4:47445001-47445020 None:intergenic 40.0%
CCTCCAACAGAAGGTAATAA+TGG - chr6.4:47444998-47445017 MS.gene79771:CDS 40.0%
CGAGTCTCAAGTGAATGAAA+TGG - chr6.4:47444168-47444187 MS.gene79771:intron 40.0%
CTTACCATACCTAAGCCAAA+TGG + chr6.4:47443679-47443698 None:intergenic 40.0%
GAGCAACAAAGGAAACTACA+TGG - chr6.4:47443858-47443877 MS.gene79771:intron 40.0%
GATGAAACACTTAGACTTGG+TGG - chr6.4:47445573-47445592 MS.gene79771:intron 40.0%
TACTCAATGTCCTAATGCCA+TGG - chr6.4:47445147-47445166 MS.gene79771:intron 40.0%
TCATTGTGTCTTCCACTAAC+AGG - chr6.4:47445545-47445564 MS.gene79771:intron 40.0%
TGGCATTAGGACATTGAGTA+AGG + chr6.4:47445147-47445166 None:intergenic 40.0%
TTCATACCACACTGCTATGA+AGG - chr6.4:47444252-47444271 MS.gene79771:intron 40.0%
TTTCAATCCTTGGAGATGGA+TGG - chr6.4:47446398-47446417 MS.gene79771:intron 40.0%
! AGGAAGGAAGAGAAAAGCAT+AGG - chr6.4:47443094-47443113 MS.gene79771:intron 40.0%
! AGTCCATTTTATGCACCCTT+TGG - chr6.4:47446548-47446567 MS.gene79771:intron 40.0%
! CTTGGAGAAGAATGACTTGT+TGG + chr6.4:47443980-47443999 None:intergenic 40.0%
! GGAACCACAAAACATCCTTT+TGG + chr6.4:47446327-47446346 None:intergenic 40.0%
! GTGCCGCTATAATCTCTATT+TGG + chr6.4:47443569-47443588 None:intergenic 40.0%
! TCTTCCATTTGGCTTAGGTA+TGG - chr6.4:47443672-47443691 MS.gene79771:CDS 40.0%
! TTGGAGGACCATTTTGTCTT+TGG + chr6.4:47444985-47445004 None:intergenic 40.0%
!! CAGTAGAGACCAGTTTGTTA+AGG - chr6.4:47445520-47445539 MS.gene79771:intron 40.0%
AAATCTAGCACCTCCTCCAA+AGG + chr6.4:47446567-47446586 None:intergenic 45.0%
AAGTCTGCAACAGCATCATC+TGG + chr6.4:47445058-47445077 None:intergenic 45.0%
AATCTAGCACCTCCTCCAAA+GGG + chr6.4:47446566-47446585 None:intergenic 45.0%
ACATACCAGAAGCTGTTCCA+TGG + chr6.4:47445167-47445186 None:intergenic 45.0%
AGAAGCTGTTCCATGGCATT+AGG + chr6.4:47445160-47445179 None:intergenic 45.0%
AGTTCGTGCGAATACACCAA+TGG + chr6.4:47445981-47446000 None:intergenic 45.0%
ATCGTACCTTCATAGCAGTG+TGG + chr6.4:47444261-47444280 None:intergenic 45.0%
CAAAATGGTCCTCCAACAGA+AGG - chr6.4:47444989-47445008 MS.gene79771:CDS 45.0%
CAGTTCAAGGAGAGCAACAA+AGG - chr6.4:47443847-47443866 MS.gene79771:intron 45.0%
CCTATTTGGAAAATGGGCAG+TGG - chr6.4:47443713-47443732 MS.gene79771:CDS 45.0%
GTCCCTCCCTCTATAAACAA+TGG + chr6.4:47443473-47443492 None:intergenic 45.0%
GTGTAGGGACTATGTTGATG+CGG + chr6.4:47445902-47445921 None:intergenic 45.0%
TAATGCCATGGAACAGCTTC+TGG - chr6.4:47445159-47445178 MS.gene79771:intron 45.0%
TAGGTCTGCTATGGTCAAGA+GGG + chr6.4:47446677-47446696 None:intergenic 45.0%
TGTGCTTCTTAGGTCTGCTA+TGG + chr6.4:47446686-47446705 None:intergenic 45.0%
TTAGGTCTGCTATGGTCAAG+AGG + chr6.4:47446678-47446697 None:intergenic 45.0%
TTCTCTTGGACAGGATGAAC+AGG - chr6.4:47445296-47445315 MS.gene79771:intron 45.0%
TTGGGAATGTCGATAATGCG+AGG - chr6.4:47443360-47443379 MS.gene79771:intron 45.0%
! AGACCTAAGAAGCACAGACA+CGG - chr6.4:47446690-47446709 MS.gene79771:intron 45.0%
! AGGCACAGATTTTTCTCGTC+TGG - chr6.4:47444492-47444511 MS.gene79771:intron 45.0%
! CCACTGCCCATTTTCCAAAT+AGG + chr6.4:47443716-47443735 None:intergenic 45.0%
! CCATTTTATGCACCCTTTGG+AGG - chr6.4:47446551-47446570 MS.gene79771:intron 45.0%
! CCTCCAAAGGGTGCATAAAA+TGG + chr6.4:47446554-47446573 None:intergenic 45.0%
!! GACTTGGTGGCATTGCAATT+TGG - chr6.4:47445586-47445605 MS.gene79771:intron 45.0%
!! TTTTATGCACCCTTTGGAGG+AGG - chr6.4:47446554-47446573 MS.gene79771:intron 45.0%
!! ATATTAATTAAATTTATAGT+TGG - chr6.4:47445491-47445510 MS.gene79771:intron 5.0%
AGCATAGGAAGATTGCCACC+AGG - chr6.4:47443109-47443128 MS.gene79771:intron 50.0%
ATCAGTGTCAGTGTCGTGTC+TGG + chr6.4:47446719-47446738 None:intergenic 50.0%
CAGTGTGGTATGAAGAGCCA+GGG + chr6.4:47444246-47444265 None:intergenic 50.0%
GAAGAGCCAGGGATGTTGAT+GGG + chr6.4:47444235-47444254 None:intergenic 50.0%
TAGGAAGATTGCCACCAGGA+AGG - chr6.4:47443113-47443132 MS.gene79771:intron 50.0%
TCAGGTTCCATCCATCTCCA+AGG + chr6.4:47446408-47446427 None:intergenic 50.0%
TCTGCTATGGTCAAGAGGGA+GGG + chr6.4:47446673-47446692 None:intergenic 50.0%
TGAAGAGCCAGGGATGTTGA+TGG + chr6.4:47444236-47444255 None:intergenic 50.0%
TGTCCGTGTCTGTGCTTCTT+AGG + chr6.4:47446696-47446715 None:intergenic 50.0%
!! AGGAGAGGTTGGCCTTTGAT+AGG - chr6.4:47443133-47443152 MS.gene79771:intron 50.0%
!!! GGAGGTGCTAGATTTTGTCC+TGG - chr6.4:47446572-47446591 MS.gene79771:intron 50.0%
AAAGGCCAACCTCTCCTTCC+TGG + chr6.4:47443130-47443149 None:intergenic 55.0%
AGATTGCCACCAGGAAGGAG+AGG - chr6.4:47443118-47443137 MS.gene79771:intron 55.0%
GCAGTGTGGTATGAAGAGCC+AGG + chr6.4:47444247-47444266 None:intergenic 55.0%
GTCTGCTATGGTCAAGAGGG+AGG + chr6.4:47446674-47446693 None:intergenic 55.0%
TCCGTTCCCATCAACATCCC+TGG - chr6.4:47444226-47444245 MS.gene79771:intron 55.0%
! GCCAGGGATGTTGATGGGAA+CGG + chr6.4:47444230-47444249 None:intergenic 55.0%
TGCCACCAGGAAGGAGAGGT+TGG - chr6.4:47443122-47443141 MS.gene79771:intron 60.0%
AGGCGAGCTAGCTCAGCTCC+AGG + chr6.4:47446593-47446612 None:intergenic 65.0%
GGCCAACCTCTCCTTCCTGG+TGG + chr6.4:47443127-47443146 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 47443004 47447064 47443004 ID=MS.gene79771
chr6.4 mRNA 47443004 47447064 47443004 ID=MS.gene79771.t1;Parent=MS.gene79771
chr6.4 exon 47446841 47447064 47446841 ID=MS.gene79771.t1.exon1;Parent=MS.gene79771.t1
chr6.4 CDS 47446841 47447064 47446841 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47446055 47446379 47446055 ID=MS.gene79771.t1.exon2;Parent=MS.gene79771.t1
chr6.4 CDS 47446055 47446379 47446055 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47445795 47445944 47445795 ID=MS.gene79771.t1.exon3;Parent=MS.gene79771.t1
chr6.4 CDS 47445795 47445944 47445795 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47444888 47445130 47444888 ID=MS.gene79771.t1.exon4;Parent=MS.gene79771.t1
chr6.4 CDS 47444888 47445130 47444888 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47444676 47444759 47444676 ID=MS.gene79771.t1.exon5;Parent=MS.gene79771.t1
chr6.4 CDS 47444676 47444759 47444676 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47444423 47444501 47444423 ID=MS.gene79771.t1.exon6;Parent=MS.gene79771.t1
chr6.4 CDS 47444423 47444501 47444423 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47443634 47443755 47443634 ID=MS.gene79771.t1.exon7;Parent=MS.gene79771.t1
chr6.4 CDS 47443634 47443755 47443634 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47443414 47443541 47443414 ID=MS.gene79771.t1.exon8;Parent=MS.gene79771.t1
chr6.4 CDS 47443414 47443541 47443414 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
chr6.4 exon 47443004 47443112 47443004 ID=MS.gene79771.t1.exon9;Parent=MS.gene79771.t1
chr6.4 CDS 47443004 47443112 47443004 ID=cds.MS.gene79771.t1;Parent=MS.gene79771.t1
Gene Sequence

>MS.gene79771

ATGAGAGAAAATATTTCAGAAACATGGTTAGTGATGATCATTGTGATATTGTTCACTGCAATATTTGCAAAAGTAATTCAAATCAAGAAAAGGAAGGAAGAGAAAAGCATAGGAAGATTGCCACCAGGAAGGAGAGGTTGGCCTTTGATAGGTGACAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAATTTGTTGAAGAAATGGTGCAAAGGTATTTACTAGTAATATAAAATTTGATTAAATATACAATTTGGTCCTGAAATTGTAGAGTTGTATCAATTTAGTCCTCACACATTATCAATATTTCAAACTGAATTGAAATTTTGCAATTTTAAAGATAATTTTGGGAATGTCGATAATGCGAGGAACTGAATTGATACAGTTCTATACTTTCAAGGACTAATTTGATAATGCAAGGAATTTGTTAGAAATGCCTTGTAAAAATCATTCTAACCATTGTTTATAGAGGGAGGGACTATAGTACTATATCATAGCAGCATTTGAACAGATCTCTATTGTTCCGCGATATGCTATGAGTATAAAATATTGCCAAATAGAGATTATAGCGGCACTATAGCGCTGTTGTGTCGAGAAATTTAAACAAACTTCTAGTTTTTTCTATCCACAATCACAACGCTGTTTTCTAACAGATAAATCTTCCATTTGGCTTAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGAAAATGGGCAGTGGTGTCATCTGATCCGAGCTTCAATCGTTTTGTAATGCAAAATGAAGGAAAATTATTCATGTCAAGTTATCCAAAATCTTTTAGAGATTTGGTTGGTAAAAATGGTGTGATTACAGTTCAAGGAGAGCAACAAAGGAAACTACATGGAATCGCATCCAATATGATGCGATTAGATAAGCTTAAGTTCCATTTCATGAATGATATACAAAATGTCATGATCAAAACTTTGAGCAATTTTAAAAACCAACAAGTCATTCTTCTCCAAGATGTTTGTAGAAAGGTAACAATCCATTTACTTTCTAACAGCATTTTCATTTTCAATTATGAGAAATTTATCAGATTTAGTACAAGTCACTCATTTTGAACTAATGTGTACATGATTTAATGCAGGTAGCTATAAATTTAATGGTTAATCAACTATTAGGGGTTTCAAGCGAGTCTCAAGTGAATGAAATGGCTCAGTTGTTTTCTGATTTTGTCGATGGTTGTCTATCCGTTCCCATCAACATCCCTGGCTCTTCATACCACACTGCTATGAAGGTACGATGAGTAAACTTTTAGACCAATGATATATAAAGAGAGTAGAATTGCAAAATGAAAACAAAAGAGTGTTAAGAAGTTGGTATTTTTTAGCTACATAACGTTGAACTACATTTCAAAGAAATGAGTTTATTGTTCTCATGATCATGTCCTTCAAGAACCATCTTATATGAAGTACTTGAAATTGTCCATTTCAAATAACACTGCAAGCCATAATTAGGCACAGATTTTTCTCGTCTGGTTTATTGATTGTTATGCAAGTAAATCAGCATTTTAGTGCTTAAAATTGTAAGAGTTGGTCAATTTAGTACCTCAAATTTACGAAATAGAAATTCAGTCTCTTAAATAAATCAATGCTGGTCAATCTAGTCCTTTTTCTGAATTTAGTACCACAGTTTTAAGGTTCTATGCTTGTCAAGATGCAGCAAAAGACTACTCATTCAAGTCAATATGTAACTCTTTCATTGGTTTTGATTAATGTAACTCTTTCTCGACTGTTACAATTTCAAGTCCTGAAATGCTGATTCTTTGATTGTTATGTTAATCGGTTAATCTTATAAGGGTTTTTCTATCATGTGTGAATATGCACGTGTTAATTAAATTACTTAGGCAAAATATAATTCTAGATTAATCAGATATTGATGTGACATTCTTTGGATATTAGGCAAGAGAGAAAATCATAAGTAAAATAAACAAGATCATAGAGGTCCAAAGACAAAATGGTCCTCCAACAGAAGGTAATAATGGTGTACTTGGAAGACTAATAGAGGAAGATAGTTTGCCAGATGATGCTGTTGCAGACTTCATCATCAATCTTCTTTTTGCTGGCAATGAAACAACCACCAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGTCCTAATGCCATGGAACAGCTTCTGGTATGTATCATAGAATTAATCTTTAAATTGATTTTCCTTATTTAGGTCCTGCATAGTTAAGCTACTTAATTAAGTGCTTATGTCCTAATGCTTTCTTACTAATTTCTGCATATAATTCTCTTGGACAGGATGAACAGGATTCTCTAAGGACTAATTCTAGAGAAGAATTTCTTACATGGCAGGACTATAAAGCAATGCCATTTACTCAATGTGTAAGTGATTAACATTTTTGGCTATTTTTCATAACAGATTGTTTTCAACTCAATTTTGATGACGTAGTTCATCTCATAAATATTTTTCAATTTGAAAGATATTAATTAAATTTATAGTTGGCATATTCAGTAGAGACCAGTTTGTTAAGGTTTCATTGTGTCTTCCACTAACAGGTCATTGATGAAACACTTAGACTTGGTGGCATTGCAATTTGGTTACTTAGAGAAGCAAAAGAAGACATTCAATACCAAGGTACACAATTTTGAGAGTGGTTGGTATGCAAGTTCATTGTATAAGAACTTATATCAGTATCCACTAATATGTTGATTATTGACAAGTCATTATCTATAATTATTTTAATTCTCTCAATGATTAAAATAACTTAAATAAATAATGTTTTGTCAACCTATTAGTATATGCAAGTATAATCTCTATTACATTGAAAATGATATCGTTTAATATTAGTACATGAATGAATATCCAATTTGGTCATGAAAATGTTGGACCGCATCAACATAGTCCCTACACCAACAACATTTCAAAATGATAAGTGAAATTGAAAAATGTTAATCAGATTCGTCTCTCCATTGGTGTATTCGCACGAACTATAATGACATTATGTTGGTAATTTTATCGATACATTTGAAAGTTGAAACTAAGAGAATAATGTCGGGGATGTCATGAATGTATTTGATAACATATTTAGAGTCTAGACAGAGAGTCCGACCTGATTAATATTATACAATTTTAAAGATTATTTTGAAATATTAATAATGTGGAGGACTAAATTGATCCTACAATTTCAGGACCAAATTATATATTTACTCATTAGTGCAATAAACTATTATTGCAGCAATGATATGCATGTAAAAGCTTAATACTATAAATTACTGACAAAAGCTTATCTATTTTTGAGCAGATTTTGTTATACCAAAAGGATGTTTTGTGGTTCCATTTCTCTCAGCAGTTCATTTAGATGAGAAGGTGTACAATGAAGCTAAAAATTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGTTAATCCACATAACATTTTAGTGAATAATGTATATAATTTTGTACTTTTATTTCAATTTTTTCCTTAATTGTTATGGTCTCATTTATCAAGGAAAAGAGAAATTGGAGAAGTAGTCCATTTTATGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCTGGAGCTGAGCTAGCTCGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACAAATTATAGGTAATGCATCTCTCTCCCTCCCTCTTGACCATAGCAGACCTAAGAAGCACAGACACGGACACCAGACACGACACTGACACTGATACGCCGACATCGTTAATAATTTGAGATCGGTGGTTAATGATTGTTTATATTCATTAGTCATCCACCAAACATAATTAACTACATATTAGATCGGCGTTAACCATCCAAATTACTGTCGATTTTGTTGTAAAATTTGTGTTCCACTTGTATGACTTGTAGTTGAAGGATAATCTATCAAATTTGATCCTACCTAACATGTTTGAATGATTTACAACAGATGGAAACAAATGAAGGAAGATAGGATGTCCTTTTTTCCCTCAGCTCGGTTAGTGAATGGCTTTGAAATTTGTCTAACAAAAAGACATGATAATAATCAAAGAAACTGA

Protein sequence

>MS.gene79771.t1

MRENISETWLVMIIVILFTAIFAKVIQIKKRKEEKSIGRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVQRYGKIFSCSLFGKWAVVSSDPSFNRFVMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIKTLSNFKNQQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSVPINIPGSSYHTAMKAREKIISKINKIIEVQRQNGPPTEGNNGVLGRLIEEDSLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPNAMEQLLDEQDSLRTNSREEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLLREAKEDIQYQDFVIPKGCFVVPFLSAVHLDEKVYNEAKNFNPWRWMEPENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTNYRWKQMKEDRMSFFPSARLVNGFEICLTKRHDNNQRN