Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79865.t1 | RHN69131.1 | 91.9 | 789 | 45 | 1 | 1 | 770 | 16 | 804 | 0.00E+00 | 1378.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79865.t1 | Q9LU44 | 32.3 | 186 | 108 | 3 | 79 | 253 | 157 | 335 | 3.6e-18 | 95.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79865.t1 | A0A396IWT8 | 91.9 | 789 | 45 | 1 | 1 | 770 | 16 | 804 | 0.0e+00 | 1378.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene79865 | -0.802837 | 4.64E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene79865 | -0.80638 | 8.46E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene79865 | 0.834648 | 2.65E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene79865 | -0.812886 | 3.38E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene79865 | -0.814588 | 1.43E-51 | -1.69E-46 |
| MS.gene056776 | MS.gene79865 | -0.807814 | 4.21E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene79865 | -0.818899 | 1.54E-52 | -1.69E-46 |
| MS.gene058279 | MS.gene79865 | -0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene79865 | 0.818372 | 2.03E-52 | -1.69E-46 |
| MS.gene060134 | MS.gene79865 | -0.839176 | 1.85E-57 | -1.69E-46 |
| MS.gene060135 | MS.gene79865 | -0.814373 | 1.59E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene79865 | -0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene79865 | 0.848005 | 8.07E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79865.t1 | MTR_3g083770 | 92.776 | 789 | 38 | 1 | 1 | 770 | 16 | 804 | 0.0 | 1429 |
| MS.gene79865.t1 | MTR_3g083770 | 92.649 | 789 | 38 | 2 | 1 | 770 | 16 | 803 | 0.0 | 1422 |
| MS.gene79865.t1 | MTR_3g083770 | 91.297 | 563 | 30 | 1 | 227 | 770 | 1 | 563 | 0.0 | 977 |
| MS.gene79865.t1 | MTR_4g036415 | 30.736 | 231 | 113 | 6 | 53 | 253 | 95 | 308 | 4.22e-23 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79865.t1 | AT3G32940 | 48.062 | 258 | 106 | 5 | 8 | 261 | 2 | 235 | 1.15e-66 | 232 |
| MS.gene79865.t1 | AT5G51300 | 30.702 | 228 | 107 | 7 | 60 | 253 | 125 | 335 | 1.75e-22 | 103 |
| MS.gene79865.t1 | AT5G51300 | 30.702 | 228 | 107 | 7 | 60 | 253 | 125 | 335 | 1.75e-22 | 103 |
| MS.gene79865.t1 | AT5G51300 | 30.702 | 228 | 107 | 7 | 60 | 253 | 125 | 335 | 1.75e-22 | 103 |
Find 249 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCAACCTCCACCTGTTTC+TGG | 0.078271 | 3.1:+65730166 | MS.gene79865:CDS |
| ACACCTTCTGTATCTGTTTC+TGG | 0.104761 | 3.1:+65729863 | MS.gene79865:CDS |
| AAATTTGTTGGTCTTATTTA+TGG | 0.107351 | 3.1:+65729246 | MS.gene79865:CDS |
| TCATTGTTTGTGATGGAAAA+TGG | 0.154644 | 3.1:-65730114 | None:intergenic |
| TCAACTGGAAACCATTTATT+AGG | 0.187606 | 3.1:+65730685 | MS.gene79865:CDS |
| ATTCCAACATCTTTGAAATT+TGG | 0.207413 | 3.1:-65727955 | None:intergenic |
| TAGCAAGGTGTTGTGGATTT+GGG | 0.209191 | 3.1:-65730084 | None:intergenic |
| ACCCCTTTATTTGCTTCTTC+TGG | 0.217183 | 3.1:+65730049 | MS.gene79865:CDS |
| CTAGCAAGGTGTTGTGGATT+TGG | 0.220109 | 3.1:-65730085 | None:intergenic |
| TCTAAATTTGGTGCCAAATC+TGG | 0.242872 | 3.1:+65727566 | MS.gene79865:CDS |
| TACGTCTCTGCTGCTCCTTT+TGG | 0.246885 | 3.1:+65731039 | MS.gene79865:CDS |
| GGCCTCCATGCCTTCAAATT+CGG | 0.255606 | 3.1:+65730810 | MS.gene79865:CDS |
| GAGCCAGACTTGCTTTCATC+TGG | 0.258694 | 3.1:-65728031 | None:intergenic |
| CACCAAATTTAGAGAGCTTT+TGG | 0.259191 | 3.1:-65727556 | None:intergenic |
| TCAAGTCTGATTTCAGCTTT+TGG | 0.264980 | 3.1:+65730142 | MS.gene79865:CDS |
| GTCCGCGCACGCCGCCATTT+AGG | 0.269653 | 3.1:+65730941 | MS.gene79865:CDS |
| ATTAACCCCTCACGGCAATA+TGG | 0.272987 | 3.1:+65730474 | MS.gene79865:CDS |
| TGCATAGAAAACTGCTGATT+TGG | 0.275514 | 3.1:-65730205 | None:intergenic |
| AGCCAAAAGCTCTCTAAATT+TGG | 0.276842 | 3.1:+65727554 | MS.gene79865:CDS |
| CTTATTACAGAAGGATTTCT+TGG | 0.280524 | 3.1:-65730301 | None:intergenic |
| ATGAAACAGGTCCTAATAAA+TGG | 0.288884 | 3.1:-65730696 | None:intergenic |
| GCCTCCATGCCTTCAAATTC+GGG | 0.291164 | 3.1:+65730811 | MS.gene79865:CDS |
| ACCTAGACCACCATCGTCTT+TGG | 0.295110 | 3.1:+65730639 | MS.gene79865:CDS |
| AATTTGTTGGTCTTATTTAT+GGG | 0.300271 | 3.1:+65729247 | MS.gene79865:CDS |
| GCAACAGATGTAGGTGAAAA+TGG | 0.302046 | 3.1:-65731336 | None:intergenic |
| ATTTGTACCCGGGATATTCT+TGG | 0.303465 | 3.1:-65729227 | None:intergenic |
| CGTGGAATCAGCAACATATT+TGG | 0.304574 | 3.1:-65730580 | None:intergenic |
| TGTCAGGAAGGCTAAGGTTT+TGG | 0.306598 | 3.1:+65727742 | MS.gene79865:CDS |
| CACCTTCTGTATCTGTTTCT+GGG | 0.315121 | 3.1:+65729864 | MS.gene79865:CDS |
| GTCGATTGTGCATACCTCTT+TGG | 0.316372 | 3.1:-65731209 | None:intergenic |
| AACTGCTGATTTGGAATAAA+CGG | 0.317481 | 3.1:-65730196 | None:intergenic |
| ACTTTCAATACTTTGGTTCA+TGG | 0.318180 | 3.1:+65730005 | MS.gene79865:CDS |
| CTTGGTTGGCTTAAAGAAAC+TGG | 0.336385 | 3.1:-65730367 | None:intergenic |
| ACCAGGTGGAGGCTTGTAAC+TGG | 0.338773 | 3.1:-65728329 | None:intergenic |
| GGGGATAACAAATCCAGATT+TGG | 0.341770 | 3.1:-65727579 | None:intergenic |
| TGCAGGATGTGCTGGCTTAC+CGG | 0.350397 | 3.1:-65731298 | None:intergenic |
| TGAGTAGTAGCTTGACTGTT+TGG | 0.351937 | 3.1:-65730892 | None:intergenic |
| TTTCTCTCCTGTGTCTGCTT+TGG | 0.356329 | 3.1:-65729454 | None:intergenic |
| CCACACCAGAAAGGTAATTC+TGG | 0.358228 | 3.1:+65731363 | MS.gene79865:CDS |
| GTGAAAATGGATCATAAATT+TGG | 0.358289 | 3.1:-65731323 | None:intergenic |
| TGCATTTGTGTACTGGCTGC+AGG | 0.363665 | 3.1:-65729974 | None:intergenic |
| CTGCCAGAAGAAGCAAATAA+AGG | 0.376448 | 3.1:-65730052 | None:intergenic |
| ATATACATTTATTAGGAAAC+TGG | 0.377746 | 3.1:+65729408 | MS.gene79865:intron |
| ATATTGCCGTGAGGGGTTAA+TGG | 0.379988 | 3.1:-65730472 | None:intergenic |
| ATTCCTGATTGCTGAGCTAA+TGG | 0.386076 | 3.1:-65730748 | None:intergenic |
| CCAGGTACTGTTCATTCAAC+TGG | 0.391421 | 3.1:+65730670 | MS.gene79865:CDS |
| TGGAGTTGTCCAGTTGGTCT+TGG | 0.392756 | 3.1:-65730385 | None:intergenic |
| TGCCAGAAGAAGCAAATAAA+GGG | 0.395738 | 3.1:-65730051 | None:intergenic |
| TGGCCTCAAACAAATCCTTT+TGG | 0.396828 | 3.1:+65730265 | MS.gene79865:CDS |
| ATCTCCTTGCATTTGTGTAC+TGG | 0.400307 | 3.1:-65729981 | None:intergenic |
| GGAGATCACTTTCAATACTT+TGG | 0.401354 | 3.1:+65729998 | MS.gene79865:CDS |
| CATTGTTTGTGATGGAAAAT+GGG | 0.401368 | 3.1:-65730113 | None:intergenic |
| AAGCTTTGAAGAGGCTGATC+AGG | 0.402278 | 3.1:-65730973 | None:intergenic |
| CGAGAGAAACGGGTCTTGTA+AGG | 0.409298 | 3.1:-65730522 | None:intergenic |
| TTAACCCCTCACGGCAATAT+GGG | 0.412774 | 3.1:+65730475 | MS.gene79865:CDS |
| TTCTGAGTGTCTCTAATCTC+TGG | 0.413004 | 3.1:-65727986 | None:intergenic |
| TCAGGCACAGCAAACCTAAA+TGG | 0.414543 | 3.1:-65730955 | None:intergenic |
| AAAGAGAAATTGCATGAGAA+GGG | 0.421152 | 3.1:-65729925 | None:intergenic |
| GGTACACAAGAGCCACCTTC+TGG | 0.421759 | 3.1:+65730919 | MS.gene79865:CDS |
| CTCGAAAAGCGGGAAGCAAT+AGG | 0.424171 | 3.1:+65728189 | MS.gene79865:CDS |
| GGTGGCTTATATTCAACATC+TGG | 0.425251 | 3.1:-65730553 | None:intergenic |
| TGCATACCTCTTTGGACATC+AGG | 0.425484 | 3.1:-65731201 | None:intergenic |
| AAAGCTGAAATCAGACTTGA+AGG | 0.427089 | 3.1:-65730139 | None:intergenic |
| GGAAGTGGAGGGGATATTCT+TGG | 0.428190 | 3.1:-65730727 | None:intergenic |
| AGTAGCTTGACTGTTTGGTC+TGG | 0.429015 | 3.1:-65730887 | None:intergenic |
| ATTTGTGGGACTTGAGATCT+TGG | 0.429834 | 3.1:-65731129 | None:intergenic |
| CCTAGACCACCATCGTCTTT+GGG | 0.430690 | 3.1:+65730640 | MS.gene79865:CDS |
| ATTTGGTCTGCAGGATGTGC+TGG | 0.431219 | 3.1:-65731306 | None:intergenic |
| GTTAATGGCTGGTTAGCTAT+TGG | 0.434006 | 3.1:-65730457 | None:intergenic |
| TTAAGCCAACCAAGACCAAC+TGG | 0.434252 | 3.1:+65730376 | MS.gene79865:CDS |
| TGCCCCTCAAATGCAAAACT+TGG | 0.437679 | 3.1:+65731173 | MS.gene79865:CDS |
| GTAAAATTTCCCGAATTTGA+AGG | 0.438768 | 3.1:-65730820 | None:intergenic |
| AACAATCCCTCCTTGGCTTC+CGG | 0.441953 | 3.1:+65731279 | MS.gene79865:CDS |
| CTTCCATTAGCTCAGCAATC+AGG | 0.444772 | 3.1:+65730745 | MS.gene79865:CDS |
| GAAAGAGAAATTGCATGAGA+AGG | 0.446350 | 3.1:-65729926 | None:intergenic |
| TCGACAAAGCTATCCTGCTC+AGG | 0.450978 | 3.1:+65731227 | MS.gene79865:CDS |
| TAAAGGGGTATGAGATGGTA+AGG | 0.453984 | 3.1:-65730035 | None:intergenic |
| AACCCAGATGAAAGCAAGTC+TGG | 0.456417 | 3.1:+65728028 | MS.gene79865:CDS |
| GGATCATAAATTTGGTCTGC+AGG | 0.458027 | 3.1:-65731315 | None:intergenic |
| ATATGGAAATGTAGGGTGTC+TGG | 0.458055 | 3.1:-65731091 | None:intergenic |
| TCAACGCCTCAACCTTTGTC+TGG | 0.458854 | 3.1:+65730421 | MS.gene79865:CDS |
| AGCCAGACTTGCTTTCATCT+GGG | 0.463396 | 3.1:-65728030 | None:intergenic |
| AATGCATCCTGTGTCGGATC+AGG | 0.465476 | 3.1:-65727719 | None:intergenic |
| GGACCAAATTTCAAAGATGT+TGG | 0.466345 | 3.1:+65727952 | MS.gene79865:CDS |
| GGAAATTAGTAGTTCAATGA+TGG | 0.468823 | 3.1:-65729657 | None:intergenic |
| GGTTGTGGACCGAGAGAAAC+GGG | 0.471798 | 3.1:-65730532 | None:intergenic |
| GAATCAGCAACATATTTGGC+TGG | 0.473232 | 3.1:-65730576 | None:intergenic |
| TATGGGGCCGATGGCTCCAC+CGG | 0.473310 | 3.1:+65730492 | MS.gene79865:CDS |
| TGACCAGCATATGGAAATGT+AGG | 0.476055 | 3.1:-65731099 | None:intergenic |
| CTTGGCGAAGGAAATGAAAC+AGG | 0.476112 | 3.1:-65730709 | None:intergenic |
| AAAGGTAATTCTGGAAAATG+AGG | 0.476433 | 3.1:+65731372 | MS.gene79865:CDS |
| AATGAAAGTGAAGCATTTGT+TGG | 0.476455 | 3.1:-65730343 | None:intergenic |
| TGCCGTGAGGGGTTAATGGC+TGG | 0.476961 | 3.1:-65730468 | None:intergenic |
| AAGATCTCAAGTCCCACAAA+TGG | 0.477988 | 3.1:+65731131 | MS.gene79865:CDS |
| AACGGGTGGAATCCAGAAAC+AGG | 0.479063 | 3.1:-65730178 | None:intergenic |
| ATTTCCCGAATTTGAAGGCA+TGG | 0.481988 | 3.1:-65730815 | None:intergenic |
| TCTGCACCACACAAGATGTC+TGG | 0.482394 | 3.1:+65727506 | None:intergenic |
| CCAGTTGAATGAACAGTACC+TGG | 0.485487 | 3.1:-65730670 | None:intergenic |
| CCCAAAGACGATGGTGGTCT+AGG | 0.486702 | 3.1:-65730640 | None:intergenic |
| GTAGCTTGACTGTTTGGTCT+GGG | 0.488055 | 3.1:-65730886 | None:intergenic |
| ACTGCTGATTTGGAATAAAC+GGG | 0.491655 | 3.1:-65730195 | None:intergenic |
| GTTTAGCAACAATCCCTCCT+TGG | 0.492018 | 3.1:+65731272 | MS.gene79865:CDS |
| AGAGGCCATGCTCCCTGAGC+AGG | 0.492143 | 3.1:-65731240 | None:intergenic |
| GGTGGCCCAACTTGACCAAA+AGG | 0.492353 | 3.1:-65730280 | None:intergenic |
| AAACAGTCAAGCTACTACTC+AGG | 0.493193 | 3.1:+65730894 | MS.gene79865:CDS |
| CACTTGATAGTAGTCTGCAT+TGG | 0.494543 | 3.1:-65730860 | None:intergenic |
| GGTGCAGGTTGACCAGCATA+TGG | 0.497213 | 3.1:-65731108 | None:intergenic |
| CGACACAGGATGCATTTGTC+AGG | 0.498014 | 3.1:+65727726 | MS.gene79865:CDS |
| GGAGCTGCCGGTGGAGCCAT+CGG | 0.498991 | 3.1:-65730499 | None:intergenic |
| CTGCAGGTTGAAACACAGCT+TGG | 0.499228 | 3.1:-65729958 | None:intergenic |
| GTTGTCCAGTTGGTCTTGGT+TGG | 0.500438 | 3.1:-65730381 | None:intergenic |
| CACCCTACATTTCCATATGC+TGG | 0.500750 | 3.1:+65731096 | MS.gene79865:CDS |
| TGACCAAAAGGATTTGTTTG+AGG | 0.501608 | 3.1:-65730268 | None:intergenic |
| AAGTTCCTCATACCCATTTG+TGG | 0.502789 | 3.1:-65731144 | None:intergenic |
| TATCCCGGGTACAAATTTGT+TGG | 0.502984 | 3.1:+65729234 | MS.gene79865:CDS |
| ATTCAGGGGAATTCAGCTGC+TGG | 0.502985 | 3.1:+65729836 | MS.gene79865:intron |
| GGCGGCGTGCGCGGACCAGA+AGG | 0.506734 | 3.1:-65730934 | None:intergenic |
| ACTTGATAGTAGTCTGCATT+GGG | 0.509024 | 3.1:-65730859 | None:intergenic |
| CCCAGTTACAAGCCTCCACC+TGG | 0.509104 | 3.1:+65728328 | MS.gene79865:CDS |
| CTTACAAGACCCGTTTCTCT+CGG | 0.509339 | 3.1:+65730523 | MS.gene79865:CDS |
| GGGACTTGAGATCTTGGTGC+AGG | 0.510647 | 3.1:-65731123 | None:intergenic |
| AAGTCCCACAAATGGGTATG+AGG | 0.511470 | 3.1:+65731139 | MS.gene79865:CDS |
| CCAGAATTACCTTTCTGGTG+TGG | 0.515434 | 3.1:-65731363 | None:intergenic |
| AGTTCCTCATACCCATTTGT+GGG | 0.517946 | 3.1:-65731143 | None:intergenic |
| GGTCTTGTAAGGGGAGCTGC+CGG | 0.519830 | 3.1:-65730511 | None:intergenic |
| GATTGCTGAGCTAATGGAAG+TGG | 0.519966 | 3.1:-65730742 | None:intergenic |
| CACTCAGAACTCAACGTTGG+TGG | 0.520133 | 3.1:+65728000 | MS.gene79865:CDS |
| CTTGTAAGGGGAGCTGCCGG+TGG | 0.521129 | 3.1:-65730508 | None:intergenic |
| ATATGTTGACATGCATCTCT+TGG | 0.521419 | 3.1:-65729598 | None:intergenic |
| TAATCAGAAGCGACTGGAGA+AGG | 0.523062 | 3.1:+65729281 | MS.gene79865:CDS |
| TCGGCCCCATATTGCCGTGA+GGG | 0.523715 | 3.1:-65730480 | None:intergenic |
| GCGTTGAAGAGACTGATGTC+TGG | 0.527033 | 3.1:-65730405 | None:intergenic |
| AAATTGAGAGGAAATCAAGA+TGG | 0.527290 | 3.1:+65727693 | MS.gene79865:CDS |
| ACCTTCTGTATCTGTTTCTG+GGG | 0.534577 | 3.1:+65729865 | MS.gene79865:CDS |
| AATTGAGAGGAAATCAAGAT+GGG | 0.534663 | 3.1:+65727694 | MS.gene79865:CDS |
| AGCCTCTTCAAAGCTTTCAA+AGG | 0.535341 | 3.1:+65730980 | MS.gene79865:CDS |
| TGCATTTGTCAGGAAGGCTA+AGG | 0.536700 | 3.1:+65727736 | MS.gene79865:CDS |
| GAACCAATACTTACAGGCAA+AGG | 0.537584 | 3.1:-65728382 | None:intergenic |
| GCATCTCTTGGTAACCGCAC+TGG | 0.538752 | 3.1:-65729586 | None:intergenic |
| TGCTGGCTTACCGGAAGCCA+AGG | 0.539294 | 3.1:-65731289 | None:intergenic |
| AGCAAGGTGTTGTGGATTTG+GGG | 0.540900 | 3.1:-65730083 | None:intergenic |
| AGATCTCAAGTCCCACAAAT+GGG | 0.542336 | 3.1:+65731132 | MS.gene79865:CDS |
| GCTATCCTGCTCAGGGAGCA+TGG | 0.543642 | 3.1:+65731235 | MS.gene79865:CDS |
| AATCAGCAACATATTTGGCT+GGG | 0.544073 | 3.1:-65730575 | None:intergenic |
| AGCAACATATTTGGCTGGGG+TGG | 0.546173 | 3.1:-65730571 | None:intergenic |
| TCACGGCAATATGGGGCCGA+TGG | 0.546947 | 3.1:+65730483 | MS.gene79865:CDS |
| GACACAAGTCTCCAACCAGC+TGG | 0.547951 | 3.1:+65731002 | MS.gene79865:CDS |
| TTGCTAAACTTCTGATTCAG+AGG | 0.548374 | 3.1:-65731258 | None:intergenic |
| ATTACAGAAGGATTTCTTGG+TGG | 0.551389 | 3.1:-65730298 | None:intergenic |
| TCGTCTTTGGGACCAATGCC+AGG | 0.551494 | 3.1:+65730652 | MS.gene79865:CDS |
| GCAAATAAAGGGGTATGAGA+TGG | 0.551801 | 3.1:-65730040 | None:intergenic |
| GTCCTTTGAAAGCTTTGAAG+AGG | 0.552634 | 3.1:-65730982 | None:intergenic |
| GAATTACCTTTCTGGTGTGG+AGG | 0.554094 | 3.1:-65731360 | None:intergenic |
| AATGCTAGAACTCGAAAAGC+GGG | 0.554196 | 3.1:+65728179 | MS.gene79865:CDS |
| TTACAGGTCCAAGAATATCC+CGG | 0.556344 | 3.1:+65729219 | MS.gene79865:intron |
| AACCTAAATGGCGGCGTGCG+CGG | 0.558256 | 3.1:-65730943 | None:intergenic |
| TTCCAGGGTGAAATTAAACC+AGG | 0.558811 | 3.1:+65729554 | MS.gene79865:intron |
| CTGACAAATGCATCCTGTGT+CGG | 0.560067 | 3.1:-65727725 | None:intergenic |
| AGGTGATAATCAGAAGCGAC+TGG | 0.560138 | 3.1:+65729275 | MS.gene79865:CDS |
| TTTAACAATGGTTTAAAACC+AGG | 0.560425 | 3.1:-65728346 | None:intergenic |
| GGTCTTATTTATGGGACTGA+AGG | 0.561574 | 3.1:+65729255 | MS.gene79865:CDS |
| CCAGGTGGAGGCTTGTAACT+GGG | 0.561595 | 3.1:-65728328 | None:intergenic |
| TTATATTCAACATCTGGTTG+TGG | 0.562195 | 3.1:-65730547 | None:intergenic |
| TTATGTGCACTTATTACAGA+AGG | 0.562966 | 3.1:-65730310 | None:intergenic |
| TATGGAAATGTAGGGTGTCT+GGG | 0.563463 | 3.1:-65731090 | None:intergenic |
| GATGTCTGGAGTTGTCCAGT+TGG | 0.564786 | 3.1:-65730391 | None:intergenic |
| TGGTTGTGGACCGAGAGAAA+CGG | 0.564956 | 3.1:-65730533 | None:intergenic |
| TTTGAAGGCATGGAGGCCAA+TGG | 0.565210 | 3.1:-65730805 | None:intergenic |
| GCAGAGACGTAAGCTTGAGA+TGG | 0.570381 | 3.1:-65731027 | None:intergenic |
| ACCTCTTTGGACATCAGGAC+TGG | 0.571413 | 3.1:-65731196 | None:intergenic |
| ATACGCCCACGTAAAACCAT+TGG | 0.575532 | 3.1:+65730789 | MS.gene79865:CDS |
| GAAGGGCTCATTGTTTGTGA+TGG | 0.577438 | 3.1:-65730121 | None:intergenic |
| ACTACTAATTTCCTCTGTAA+CGG | 0.580767 | 3.1:+65729667 | MS.gene79865:CDS |
| TGCTGAGCTAATGGAAGTGG+AGG | 0.580942 | 3.1:-65730739 | None:intergenic |
| GAATGAACAGTACCTGGCAT+TGG | 0.581407 | 3.1:-65730664 | None:intergenic |
| GAGAGAAACGGGTCTTGTAA+GGG | 0.581503 | 3.1:-65730521 | None:intergenic |
| CCGCACTGGACATCAGTGCC+TGG | 0.584220 | 3.1:-65729572 | None:intergenic |
| TACAGGTCCAAGAATATCCC+GGG | 0.585013 | 3.1:+65729220 | MS.gene79865:intron |
| GGTGCTCTAGCAAGGTGTTG+TGG | 0.586051 | 3.1:-65730091 | None:intergenic |
| GAAAATGGGGTGCTCTAGCA+AGG | 0.587816 | 3.1:-65730099 | None:intergenic |
| GATATACCAGACAAAGGTTG+AGG | 0.588352 | 3.1:-65730427 | None:intergenic |
| GGCGTGCGCGGACCAGAAGG+TGG | 0.590028 | 3.1:-65730931 | None:intergenic |
| AAGAGAAATTGCATGAGAAG+GGG | 0.590957 | 3.1:-65729924 | None:intergenic |
| AACAGTCAAGCTACTACTCA+GGG | 0.591753 | 3.1:+65730895 | MS.gene79865:CDS |
| TGTAAGATTTGTGTCGGTGG+TGG | 0.592288 | 3.1:-65730232 | None:intergenic |
| TGGCTCTCAAATTAATAGCA+AGG | 0.592840 | 3.1:+65728048 | MS.gene79865:CDS |
| CGACAAAGCTATCCTGCTCA+GGG | 0.593335 | 3.1:+65731228 | MS.gene79865:CDS |
| ATTGGGCTGCTGTCCTTGAA+AGG | 0.596876 | 3.1:-65730842 | None:intergenic |
| GGAGGGGATATTCTTGGCGA+AGG | 0.597825 | 3.1:-65730721 | None:intergenic |
| AGTATTCATCCACATCATGC+AGG | 0.599631 | 3.1:+65730610 | MS.gene79865:CDS |
| AAAGTTCAAAACAAATTGAG+AGG | 0.599794 | 3.1:+65727681 | MS.gene79865:CDS |
| ATCAGCAACATATTTGGCTG+GGG | 0.601455 | 3.1:-65730574 | None:intergenic |
| CGGCCCCATATTGCCGTGAG+GGG | 0.602856 | 3.1:-65730479 | None:intergenic |
| GGCTGGTTAGCTATTGGTGA+CGG | 0.603499 | 3.1:-65730451 | None:intergenic |
| GACCAGCATATGGAAATGTA+GGG | 0.603990 | 3.1:-65731098 | None:intergenic |
| GCGTATTGAGAGGCAGAAGT+AGG | 0.604696 | 3.1:-65730772 | None:intergenic |
| AACAATGGTTTAAAACCAGG+TGG | 0.604788 | 3.1:-65728343 | None:intergenic |
| AACCAGCCATTAACCCCTCA+CGG | 0.606869 | 3.1:+65730466 | MS.gene79865:CDS |
| TAACCCCTCACGGCAATATG+GGG | 0.608483 | 3.1:+65730476 | MS.gene79865:CDS |
| TGTGGAGGTGCAACAGATGT+AGG | 0.609995 | 3.1:-65731345 | None:intergenic |
| GGATGAATACTGCCAGGTCG+TGG | 0.611383 | 3.1:-65730598 | None:intergenic |
| AGAGAAACGGGTCTTGTAAG+GGG | 0.611814 | 3.1:-65730520 | None:intergenic |
| AAGCTGAAATCAGACTTGAA+GGG | 0.612202 | 3.1:-65730138 | None:intergenic |
| AATGGTTTAAAACCAGGTGG+AGG | 0.613040 | 3.1:-65728340 | None:intergenic |
| GTTGCACCTCCACACCAGAA+AGG | 0.613358 | 3.1:+65731354 | MS.gene79865:CDS |
| GGCTTACCGGAAGCCAAGGA+GGG | 0.615526 | 3.1:-65731285 | None:intergenic |
| AAGACCAACAAATTTGTACC+CGG | 0.616120 | 3.1:-65729238 | None:intergenic |
| AAGGTAATTCTGGAAAATGA+GGG | 0.616395 | 3.1:+65731373 | MS.gene79865:CDS |
| AGAAACAGATACAGAAGGTG+TGG | 0.618597 | 3.1:-65729861 | None:intergenic |
| AAGCTTGAGATGGATCCAGC+TGG | 0.622116 | 3.1:-65731017 | None:intergenic |
| ACAGGATGCATTTGTCAGGA+AGG | 0.622340 | 3.1:+65727730 | MS.gene79865:CDS |
| TTGAGATGGATCCAGCTGGT+TGG | 0.622847 | 3.1:-65731013 | None:intergenic |
| GGTGACATTCCTGCATGATG+TGG | 0.623925 | 3.1:-65730619 | None:intergenic |
| TGGAATCCAGAAACAGGTGG+AGG | 0.625781 | 3.1:-65730172 | None:intergenic |
| CATGGAACCAAAGCAGACAC+AGG | 0.627167 | 3.1:+65729447 | MS.gene79865:CDS |
| GCTGAGCTAATGGAAGTGGA+GGG | 0.628594 | 3.1:-65730738 | None:intergenic |
| TGCTGTAAGATTTGTGTCGG+TGG | 0.629521 | 3.1:-65730235 | None:intergenic |
| GAGTGCTGTAAGATTTGTGT+CGG | 0.632626 | 3.1:-65730238 | None:intergenic |
| GCAAGGTGTTGTGGATTTGG+GGG | 0.633630 | 3.1:-65730082 | None:intergenic |
| ATGTTGCTGATTCCACGACC+TGG | 0.633742 | 3.1:+65730586 | MS.gene79865:CDS |
| ATCGGCCCCATATTGCCGTG+AGG | 0.634204 | 3.1:-65730481 | None:intergenic |
| ATGGGGACCTGATCCGACAC+AGG | 0.637383 | 3.1:+65727712 | MS.gene79865:CDS |
| CAATGCAGACTACTATCAAG+TGG | 0.639088 | 3.1:+65730861 | MS.gene79865:CDS |
| AAATGCTAGAACTCGAAAAG+CGG | 0.642409 | 3.1:+65728178 | MS.gene79865:CDS |
| GCCAGTCCTGATGTCCAAAG+AGG | 0.645143 | 3.1:+65731195 | MS.gene79865:CDS |
| AGACCAACAAATTTGTACCC+GGG | 0.645351 | 3.1:-65729237 | None:intergenic |
| TGATGTGGATGAATACTGCC+AGG | 0.647378 | 3.1:-65730604 | None:intergenic |
| ATGTCAACTCACCGTTACAG+AGG | 0.648823 | 3.1:-65729678 | None:intergenic |
| TGGCTTACCGGAAGCCAAGG+AGG | 0.651580 | 3.1:-65731286 | None:intergenic |
| TCATTAGTCCCTATTATCCG+AGG | 0.654001 | 3.1:+65727620 | MS.gene79865:CDS |
| GGCATTGGTCCCAAAGACGA+TGG | 0.656114 | 3.1:-65730649 | None:intergenic |
| AAATCTTACAGCACTCACAA+TGG | 0.658430 | 3.1:+65730245 | MS.gene79865:CDS |
| ATTGTTTGTGATGGAAAATG+GGG | 0.661649 | 3.1:-65730112 | None:intergenic |
| ATTGGTCCCAAAGACGATGG+TGG | 0.664092 | 3.1:-65730646 | None:intergenic |
| GCAGCCAGTACACAAATGCA+AGG | 0.664990 | 3.1:+65729977 | MS.gene79865:CDS |
| GGCACAGCAAACCTAAATGG+CGG | 0.665012 | 3.1:-65730952 | None:intergenic |
| CTGAGCTAATGGAAGTGGAG+GGG | 0.667014 | 3.1:-65730737 | None:intergenic |
| GGAAATGTAGGGTGTCTGGG+TGG | 0.667945 | 3.1:-65731087 | None:intergenic |
| GCCAGAAGAAGCAAATAAAG+GGG | 0.669347 | 3.1:-65730050 | None:intergenic |
| TCCCCAGAAACAGATACAGA+AGG | 0.671248 | 3.1:-65729866 | None:intergenic |
| AAAGGGGTATGAGATGGTAA+GGG | 0.676939 | 3.1:-65730034 | None:intergenic |
| GCTGATTTGGAATAAACGGG+TGG | 0.678389 | 3.1:-65730192 | None:intergenic |
| TCCCGAATTTGAAGGCATGG+AGG | 0.679044 | 3.1:-65730812 | None:intergenic |
| GGGTGGAATCCAGAAACAGG+TGG | 0.685753 | 3.1:-65730175 | None:intergenic |
| AGACACTCAGAACTCAACGT+TGG | 0.697590 | 3.1:+65727997 | MS.gene79865:CDS |
| ATTGAGAGGAAATCAAGATG+GGG | 0.702113 | 3.1:+65727695 | MS.gene79865:CDS |
| GACGGCGATATACCAGACAA+AGG | 0.704314 | 3.1:-65730433 | None:intergenic |
| AGTCAAGCTACTACTCAGGG+TGG | 0.734032 | 3.1:+65730898 | MS.gene79865:CDS |
| CCAGGCACTGATGTCCAGTG+CGG | 0.751204 | 3.1:+65729572 | MS.gene79865:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGGAAATATATACTTA+AGG | - | chr3.1:65728223-65728242 | None:intergenic | 15.0% |
| !! | AAAAGATTAGAATTTAATTC+AGG | - | chr3.1:65729370-65729389 | None:intergenic | 15.0% |
| !! | AAAGATTAGAATTTAATTCA+GGG | - | chr3.1:65729369-65729388 | None:intergenic | 15.0% |
| !! | AATCCATATTATCATTATTA+AGG | + | chr3.1:65728604-65728623 | MS.gene79865:intron | 15.0% |
| !! | ATCCATATTATCATTATTAA+GGG | + | chr3.1:65728605-65728624 | MS.gene79865:intron | 15.0% |
| !! | TTAAAAAGTTATACAACAAA+GGG | - | chr3.1:65729111-65729130 | None:intergenic | 15.0% |
| !! | TTAAAATTCCGTTATAAATT+GGG | + | chr3.1:65727829-65727848 | MS.gene79865:intron | 15.0% |
| !!! | ACATAACATTTTATGATTTA+TGG | + | chr3.1:65729714-65729733 | MS.gene79865:intron | 15.0% |
| !! | AAACTACTGATGTTTATTTA+TGG | + | chr3.1:65728141-65728160 | MS.gene79865:intron | 20.0% |
| !! | AACAACAAATTTAAATAGCA+CGG | - | chr3.1:65728430-65728449 | None:intergenic | 20.0% |
| !! | AATATCTTAATGCTTTCATT+TGG | + | chr3.1:65729082-65729101 | MS.gene79865:intron | 20.0% |
| !! | ATATACATTTATTAGGAAAC+TGG | + | chr3.1:65729408-65729427 | MS.gene79865:intron | 20.0% |
| !! | CAACATAAAGAAATACTATA+AGG | - | chr3.1:65728652-65728671 | None:intergenic | 20.0% |
| !! | CTTAAAAAGTTATACAACAA+AGG | - | chr3.1:65729112-65729131 | None:intergenic | 20.0% |
| !! | GAATATCGTAATTGTAATAT+AGG | - | chr3.1:65729004-65729023 | None:intergenic | 20.0% |
| !! | GACAATAATGATCAAAATAA+CGG | - | chr3.1:65729802-65729821 | None:intergenic | 20.0% |
| !! | GTTAAAATTCCGTTATAAAT+TGG | + | chr3.1:65727828-65727847 | MS.gene79865:intron | 20.0% |
| !! | TCATTAGTTATGAAAAGTAA+AGG | + | chr3.1:65728462-65728481 | MS.gene79865:intron | 20.0% |
| !! | TCCATATTATCATTATTAAG+GGG | + | chr3.1:65728606-65728625 | MS.gene79865:intron | 20.0% |
| !!! | AAATTTGTTGGTCTTATTTA+TGG | + | chr3.1:65729246-65729265 | MS.gene79865:CDS | 20.0% |
| !!! | AATTTGTTGGTCTTATTTAT+GGG | + | chr3.1:65729247-65729266 | MS.gene79865:CDS | 20.0% |
| !!! | ATTTATAACGGAATTTTAAC+AGG | - | chr3.1:65727828-65727847 | None:intergenic | 20.0% |
| ! | AAAGTAAAGGATACATTTAC+TGG | + | chr3.1:65728475-65728494 | MS.gene79865:intron | 25.0% |
| ! | AAAGTTCAAAACAAATTGAG+AGG | + | chr3.1:65727681-65727700 | MS.gene79865:CDS | 25.0% |
| ! | AAATTTAAATAGCACGGAAT+TGG | - | chr3.1:65728424-65728443 | None:intergenic | 25.0% |
| ! | AACATTCTTTCAAGAATATG+AGG | - | chr3.1:65728912-65728931 | None:intergenic | 25.0% |
| ! | AAGATTAGATACCAACAAAA+TGG | - | chr3.1:65729312-65729331 | None:intergenic | 25.0% |
| ! | AATTTAAATAGCACGGAATT+GGG | - | chr3.1:65728423-65728442 | None:intergenic | 25.0% |
| ! | ACCCATGAAGAAATAAAATA+AGG | - | chr3.1:65728733-65728752 | None:intergenic | 25.0% |
| ! | ACCCCTTAATAATGATAATA+TGG | - | chr3.1:65728610-65728629 | None:intergenic | 25.0% |
| ! | AGAAAGTAAGTTCTTTAATG+TGG | + | chr3.1:65729472-65729491 | MS.gene79865:intron | 25.0% |
| ! | ATAACAGATAATGCTTAGAA+AGG | - | chr3.1:65727790-65727809 | None:intergenic | 25.0% |
| ! | ATGATAATATGGATTTGACA+AGG | - | chr3.1:65728599-65728618 | None:intergenic | 25.0% |
| ! | GTGAAAATGGATCATAAATT+TGG | - | chr3.1:65731326-65731345 | None:intergenic | 25.0% |
| ! | TACAATTACGATATTCAAGT+AGG | + | chr3.1:65729008-65729027 | MS.gene79865:intron | 25.0% |
| !! | ACATTGTCTTCTTTTAACAA+TGG | - | chr3.1:65728361-65728380 | None:intergenic | 25.0% |
| !! | TTTAACAATGGTTTAAAACC+AGG | - | chr3.1:65728349-65728368 | None:intergenic | 25.0% |
| !!! | AGCTGATAATTTTGATAAAG+TGG | + | chr3.1:65729622-65729641 | MS.gene79865:CDS | 25.0% |
| !!! | ATCCTAATAACTTGTTTTTG+GGG | - | chr3.1:65727601-65727620 | None:intergenic | 25.0% |
| !!! | ATTCCAACATCTTTGAAATT+TGG | - | chr3.1:65727958-65727977 | None:intergenic | 25.0% |
| !!! | ATTTTAGAACCAATACTTAC+AGG | - | chr3.1:65728391-65728410 | None:intergenic | 25.0% |
| !!! | GATCCTAATAACTTGTTTTT+GGG | - | chr3.1:65727602-65727621 | None:intergenic | 25.0% |
| !!! | GCCTTATTTTATTTCTTCAT+GGG | + | chr3.1:65728729-65728748 | MS.gene79865:intron | 25.0% |
| !!! | TCTAATTTTAGTATTTCACC+TGG | - | chr3.1:65728307-65728326 | None:intergenic | 25.0% |
| !!! | TGATCCTAATAACTTGTTTT+TGG | - | chr3.1:65727603-65727622 | None:intergenic | 25.0% |
| AAAGAGAAATTGCATGAGAA+GGG | - | chr3.1:65729928-65729947 | None:intergenic | 30.0% | |
| AAATTGAGAGGAAATCAAGA+TGG | + | chr3.1:65727693-65727712 | MS.gene79865:CDS | 30.0% | |
| AACATTAGCATCACTTATTC+AGG | - | chr3.1:65727909-65727928 | None:intergenic | 30.0% | |
| AATTGAGAGGAAATCAAGAT+GGG | + | chr3.1:65727694-65727713 | MS.gene79865:CDS | 30.0% | |
| ACTACTAATTTCCTCTGTAA+CGG | + | chr3.1:65729667-65729686 | MS.gene79865:CDS | 30.0% | |
| ATCCCCAAAAACAAGTTATT+AGG | + | chr3.1:65727596-65727615 | MS.gene79865:CDS | 30.0% | |
| ATCGTAATTGTAATATAGGC+TGG | - | chr3.1:65729000-65729019 | None:intergenic | 30.0% | |
| ATGAAACAGGTCCTAATAAA+TGG | - | chr3.1:65730699-65730718 | None:intergenic | 30.0% | |
| ATTATCATTATTAAGGGGTG+TGG | + | chr3.1:65728611-65728630 | MS.gene79865:intron | 30.0% | |
| ATTTGCACCCATACAATATT+AGG | + | chr3.1:65728699-65728718 | MS.gene79865:intron | 30.0% | |
| CAATAGCACCCAATTTATAA+CGG | - | chr3.1:65727840-65727859 | None:intergenic | 30.0% | |
| CTTATTACAGAAGGATTTCT+TGG | - | chr3.1:65730304-65730323 | None:intergenic | 30.0% | |
| GAAAACTAAGTTGCAGTATA+AGG | + | chr3.1:65728932-65728951 | MS.gene79865:intron | 30.0% | |
| GGAAATTAGTAGTTCAATGA+TGG | - | chr3.1:65729660-65729679 | None:intergenic | 30.0% | |
| GGTACCAAGATAAAAATTCA+TGG | + | chr3.1:65729429-65729448 | MS.gene79865:CDS | 30.0% | |
| GTAAAATTTCCCGAATTTGA+AGG | - | chr3.1:65730823-65730842 | None:intergenic | 30.0% | |
| TAACACTCATTAACATGCTA+AGG | - | chr3.1:65728778-65728797 | None:intergenic | 30.0% | |
| TCAACTGGAAACCATTTATT+AGG | + | chr3.1:65730685-65730704 | MS.gene79865:CDS | 30.0% | |
| TTAGTTAACTGCTCAAAAAC+AGG | + | chr3.1:65728795-65728814 | MS.gene79865:intron | 30.0% | |
| TTATATTCAACATCTGGTTG+TGG | - | chr3.1:65730550-65730569 | None:intergenic | 30.0% | |
| TTATGTGCACTTATTACAGA+AGG | - | chr3.1:65730313-65730332 | None:intergenic | 30.0% | |
| ! | AATGAAAGTGAAGCATTTGT+TGG | - | chr3.1:65730346-65730365 | None:intergenic | 30.0% |
| ! | ACTTTCAATACTTTGGTTCA+TGG | + | chr3.1:65730005-65730024 | MS.gene79865:CDS | 30.0% |
| ! | AGAAGGTAAAACCATTTTGT+TGG | + | chr3.1:65729298-65729317 | MS.gene79865:intron | 30.0% |
| ! | ATTGTTTGTGATGGAAAATG+GGG | - | chr3.1:65730115-65730134 | None:intergenic | 30.0% |
| ! | ATTTTCCAGAATTACCTTTC+TGG | - | chr3.1:65731371-65731390 | None:intergenic | 30.0% |
| ! | CATTGTTTGTGATGGAAAAT+GGG | - | chr3.1:65730116-65730135 | None:intergenic | 30.0% |
| ! | GGTTCCATGAATTTTTATCT+TGG | - | chr3.1:65729436-65729455 | None:intergenic | 30.0% |
| ! | TCATTGTTTGTGATGGAAAA+TGG | - | chr3.1:65730117-65730136 | None:intergenic | 30.0% |
| !! | AACTGCTGATTTGGAATAAA+CGG | - | chr3.1:65730199-65730218 | None:intergenic | 30.0% |
| !! | ATTGGTTCTAAAATTCTGCT+AGG | + | chr3.1:65728397-65728416 | MS.gene79865:intron | 30.0% |
| !!! | GGCCTTATTTTATTTCTTCA+TGG | + | chr3.1:65728728-65728747 | MS.gene79865:intron | 30.0% |
| AAAGCTGAAATCAGACTTGA+AGG | - | chr3.1:65730142-65730161 | None:intergenic | 35.0% | |
| AAATCTTACAGCACTCACAA+TGG | + | chr3.1:65730245-65730264 | MS.gene79865:CDS | 35.0% | |
| AAATGCTAGAACTCGAAAAG+CGG | + | chr3.1:65728178-65728197 | MS.gene79865:CDS | 35.0% | |
| AAGACCAACAAATTTGTACC+CGG | - | chr3.1:65729241-65729260 | None:intergenic | 35.0% | |
| AAGAGAAATTGCATGAGAAG+GGG | - | chr3.1:65729927-65729946 | None:intergenic | 35.0% | |
| AAGCTGAAATCAGACTTGAA+GGG | - | chr3.1:65730141-65730160 | None:intergenic | 35.0% | |
| AAGGTTATTATCGAATACGC+AGG | - | chr3.1:65728270-65728289 | None:intergenic | 35.0% | |
| AATCAGCAACATATTTGGCT+GGG | - | chr3.1:65730578-65730597 | None:intergenic | 35.0% | |
| ACGCAGGCTATAAGAATTAA+AGG | - | chr3.1:65728254-65728273 | None:intergenic | 35.0% | |
| AGCCAAAAGCTCTCTAAATT+TGG | + | chr3.1:65727554-65727573 | MS.gene79865:CDS | 35.0% | |
| AGGGATCCAATCAAAAGATA+GGG | - | chr3.1:65729350-65729369 | None:intergenic | 35.0% | |
| ATATGCAGTACCATCTTTAC+AGG | + | chr3.1:65729203-65729222 | MS.gene79865:intron | 35.0% | |
| ATATGTTGACATGCATCTCT+TGG | - | chr3.1:65729601-65729620 | None:intergenic | 35.0% | |
| ATGGATGAGAAGAACATTTC+TGG | - | chr3.1:65728848-65728867 | None:intergenic | 35.0% | |
| ATTAAAGGGGAGGAACAAAA+AGG | - | chr3.1:65728239-65728258 | None:intergenic | 35.0% | |
| ATTACAGAAGGATTTCTTGG+TGG | - | chr3.1:65730301-65730320 | None:intergenic | 35.0% | |
| ATTGAGAGGAAATCAAGATG+GGG | + | chr3.1:65727695-65727714 | MS.gene79865:CDS | 35.0% | |
| CCTGGATATGATTAACATCA+AGG | - | chr3.1:65728289-65728308 | None:intergenic | 35.0% | |
| CCTTGATGTTAATCATATCC+AGG | + | chr3.1:65728286-65728305 | MS.gene79865:intron | 35.0% | |
| CGCAGGCTATAAGAATTAAA+GGG | - | chr3.1:65728253-65728272 | None:intergenic | 35.0% | |
| CTTCTATGCTCTTCTATTCA+GGG | + | chr3.1:65729821-65729840 | MS.gene79865:intron | 35.0% | |
| CTTTGTATGTTCCATTTCCA+GGG | + | chr3.1:65729539-65729558 | MS.gene79865:intron | 35.0% | |
| GAAAGAGAAATTGCATGAGA+AGG | - | chr3.1:65729929-65729948 | None:intergenic | 35.0% | |
| GCAGGCTATAAGAATTAAAG+GGG | - | chr3.1:65728252-65728271 | None:intergenic | 35.0% | |
| GGACCAAATTTCAAAGATGT+TGG | + | chr3.1:65727952-65727971 | MS.gene79865:CDS | 35.0% | |
| GGAGATCACTTTCAATACTT+TGG | + | chr3.1:65729998-65730017 | MS.gene79865:CDS | 35.0% | |
| GTGAATAGCAGCAATATACT+CGG | + | chr3.1:65728563-65728582 | MS.gene79865:intron | 35.0% | |
| TATTCTTGGACCTGTAAAGA+TGG | - | chr3.1:65729216-65729235 | None:intergenic | 35.0% | |
| TCATGGGTTCATATTGAACA+TGG | + | chr3.1:65728745-65728764 | MS.gene79865:intron | 35.0% | |
| TCTTCTATGCTCTTCTATTC+AGG | + | chr3.1:65729820-65729839 | MS.gene79865:intron | 35.0% | |
| TGCAATTTCTTCCCAGTTAT+TGG | + | chr3.1:65728541-65728560 | MS.gene79865:intron | 35.0% | |
| TGCCAGAAGAAGCAAATAAA+GGG | - | chr3.1:65730054-65730073 | None:intergenic | 35.0% | |
| TGGCTCTCAAATTAATAGCA+AGG | + | chr3.1:65728048-65728067 | MS.gene79865:CDS | 35.0% | |
| TTCTATGCTCTTCTATTCAG+GGG | + | chr3.1:65729822-65729841 | MS.gene79865:intron | 35.0% | |
| TTGCTAAACTTCTGATTCAG+AGG | - | chr3.1:65731261-65731280 | None:intergenic | 35.0% | |
| TTTATGTTGTGAGCTGATGA+GGG | + | chr3.1:65728663-65728682 | MS.gene79865:intron | 35.0% | |
| ! | AACAATGGTTTAAAACCAGG+TGG | - | chr3.1:65728346-65728365 | None:intergenic | 35.0% |
| ! | ACAAATCCTTTTGGTCAAGT+TGG | + | chr3.1:65730274-65730293 | MS.gene79865:CDS | 35.0% |
| ! | ACTTGATAGTAGTCTGCATT+GGG | - | chr3.1:65730862-65730881 | None:intergenic | 35.0% |
| ! | AGTTTTCGTTGTAGAACTTC+AGG | - | chr3.1:65729180-65729199 | None:intergenic | 35.0% |
| ! | CAAATCCTTTTGGTCAAGTT+GGG | + | chr3.1:65730275-65730294 | MS.gene79865:CDS | 35.0% |
| ! | CACCAAATTTAGAGAGCTTT+TGG | - | chr3.1:65727559-65727578 | None:intergenic | 35.0% |
| ! | GAGAAGAACATTTCTGGAAA+AGG | - | chr3.1:65728842-65728861 | None:intergenic | 35.0% |
| ! | GTTTAATTTCACCCTGGAAA+TGG | - | chr3.1:65729553-65729572 | None:intergenic | 35.0% |
| ! | TCAAGTCTGATTTCAGCTTT+TGG | + | chr3.1:65730142-65730161 | MS.gene79865:CDS | 35.0% |
| ! | TCGGGAAATTTTACCTTTCA+AGG | + | chr3.1:65730829-65730848 | MS.gene79865:CDS | 35.0% |
| ! | TGACCAAAAGGATTTGTTTG+AGG | - | chr3.1:65730271-65730290 | None:intergenic | 35.0% |
| ! | TGCATAGAAAACTGCTGATT+TGG | - | chr3.1:65730208-65730227 | None:intergenic | 35.0% |
| ! | TTCTGGAAAAGGAAAAGTTC+TGG | - | chr3.1:65728831-65728850 | None:intergenic | 35.0% |
| ! | TTCTTCTCATCCATTTTCCT+TGG | + | chr3.1:65728854-65728873 | MS.gene79865:intron | 35.0% |
| !! | ACTGCTGATTTGGAATAAAC+GGG | - | chr3.1:65730198-65730217 | None:intergenic | 35.0% |
| !! | TCTAAATTTGGTGCCAAATC+TGG | + | chr3.1:65727566-65727585 | MS.gene79865:CDS | 35.0% |
| !!! | TTTTAGCTCCTCGGATAATA+GGG | - | chr3.1:65727631-65727650 | None:intergenic | 35.0% |
| !!! | TTTTTAGCTCCTCGGATAAT+AGG | - | chr3.1:65727632-65727651 | None:intergenic | 35.0% |
| AAACAGTCAAGCTACTACTC+AGG | + | chr3.1:65730894-65730913 | MS.gene79865:CDS | 40.0% | |
| AACAGTCAAGCTACTACTCA+GGG | + | chr3.1:65730895-65730914 | MS.gene79865:CDS | 40.0% | |
| AAGATCTCAAGTCCCACAAA+TGG | + | chr3.1:65731131-65731150 | MS.gene79865:CDS | 40.0% | |
| AAGTTCCTCATACCCATTTG+TGG | - | chr3.1:65731147-65731166 | None:intergenic | 40.0% | |
| AATGCTAGAACTCGAAAAGC+GGG | + | chr3.1:65728179-65728198 | MS.gene79865:CDS | 40.0% | |
| ACACCTTCTGTATCTGTTTC+TGG | + | chr3.1:65729863-65729882 | MS.gene79865:CDS | 40.0% | |
| ACGAAAACAGCCAAGGAAAA+TGG | - | chr3.1:65728867-65728886 | None:intergenic | 40.0% | |
| AGAAACAGATACAGAAGGTG+TGG | - | chr3.1:65729864-65729883 | None:intergenic | 40.0% | |
| AGACCAACAAATTTGTACCC+GGG | - | chr3.1:65729240-65729259 | None:intergenic | 40.0% | |
| AGATAGGGGTTGCATATAAG+AGG | - | chr3.1:65729335-65729354 | None:intergenic | 40.0% | |
| AGATCTCAAGTCCCACAAAT+GGG | + | chr3.1:65731132-65731151 | MS.gene79865:CDS | 40.0% | |
| AGCCTCTTCAAAGCTTTCAA+AGG | + | chr3.1:65730980-65730999 | MS.gene79865:CDS | 40.0% | |
| AGTATTCATCCACATCATGC+AGG | + | chr3.1:65730610-65730629 | MS.gene79865:CDS | 40.0% | |
| AGTTCCTCATACCCATTTGT+GGG | - | chr3.1:65731146-65731165 | None:intergenic | 40.0% | |
| ATCAGCAACATATTTGGCTG+GGG | - | chr3.1:65730577-65730596 | None:intergenic | 40.0% | |
| ATCCGAGGAGCTAAAAAAGA+TGG | + | chr3.1:65727635-65727654 | MS.gene79865:CDS | 40.0% | |
| ATCTCCTTGCATTTGTGTAC+TGG | - | chr3.1:65729984-65730003 | None:intergenic | 40.0% | |
| ATTCCTGATTGCTGAGCTAA+TGG | - | chr3.1:65730751-65730770 | None:intergenic | 40.0% | |
| ATTTCCCGAATTTGAAGGCA+TGG | - | chr3.1:65730818-65730837 | None:intergenic | 40.0% | |
| ATTTGTACCCGGGATATTCT+TGG | - | chr3.1:65729230-65729249 | None:intergenic | 40.0% | |
| ATTTGTGGGACTTGAGATCT+TGG | - | chr3.1:65731132-65731151 | None:intergenic | 40.0% | |
| CAATGCAGACTACTATCAAG+TGG | + | chr3.1:65730861-65730880 | MS.gene79865:CDS | 40.0% | |
| CAGGGATCCAATCAAAAGAT+AGG | - | chr3.1:65729351-65729370 | None:intergenic | 40.0% | |
| CGTGGAATCAGCAACATATT+TGG | - | chr3.1:65730583-65730602 | None:intergenic | 40.0% | |
| CTCACCGCCTAATATTGTAT+GGG | - | chr3.1:65728709-65728728 | None:intergenic | 40.0% | |
| CTGCCAGAAGAAGCAAATAA+AGG | - | chr3.1:65730055-65730074 | None:intergenic | 40.0% | |
| CTTTATGTTGTGAGCTGATG+AGG | + | chr3.1:65728662-65728681 | MS.gene79865:intron | 40.0% | |
| GAACCAATACTTACAGGCAA+AGG | - | chr3.1:65728385-65728404 | None:intergenic | 40.0% | |
| GAATCAGCAACATATTTGGC+TGG | - | chr3.1:65730579-65730598 | None:intergenic | 40.0% | |
| GACCAGCATATGGAAATGTA+GGG | - | chr3.1:65731101-65731120 | None:intergenic | 40.0% | |
| GATATACCAGACAAAGGTTG+AGG | - | chr3.1:65730430-65730449 | None:intergenic | 40.0% | |
| GCAACAGATGTAGGTGAAAA+TGG | - | chr3.1:65731339-65731358 | None:intergenic | 40.0% | |
| GCCAGAAGAAGCAAATAAAG+GGG | - | chr3.1:65730053-65730072 | None:intergenic | 40.0% | |
| GCTGCTATTCACCAATAACT+GGG | - | chr3.1:65728555-65728574 | None:intergenic | 40.0% | |
| GCTTTGTATGTTCCATTTCC+AGG | + | chr3.1:65729538-65729557 | MS.gene79865:intron | 40.0% | |
| GGATCATAAATTTGGTCTGC+AGG | - | chr3.1:65731318-65731337 | None:intergenic | 40.0% | |
| GGCTATAAGAATTAAAGGGG+AGG | - | chr3.1:65728249-65728268 | None:intergenic | 40.0% | |
| GGGATCCAATCAAAAGATAG+GGG | - | chr3.1:65729349-65729368 | None:intergenic | 40.0% | |
| GGGGATAACAAATCCAGATT+TGG | - | chr3.1:65727582-65727601 | None:intergenic | 40.0% | |
| GGTGGCTTATATTCAACATC+TGG | - | chr3.1:65730556-65730575 | None:intergenic | 40.0% | |
| GTTCCTTTGCCTGTAAGTAT+TGG | + | chr3.1:65728379-65728398 | MS.gene79865:intron | 40.0% | |
| TATCCCGGGTACAAATTTGT+TGG | + | chr3.1:65729234-65729253 | MS.gene79865:CDS | 40.0% | |
| TCATTAGTCCCTATTATCCG+AGG | + | chr3.1:65727620-65727639 | MS.gene79865:CDS | 40.0% | |
| TCCGAGGAGCTAAAAAAGAT+GGG | + | chr3.1:65727636-65727655 | MS.gene79865:CDS | 40.0% | |
| TGACCAGCATATGGAAATGT+AGG | - | chr3.1:65731102-65731121 | None:intergenic | 40.0% | |
| TGAGTAGTAGCTTGACTGTT+TGG | - | chr3.1:65730895-65730914 | None:intergenic | 40.0% | |
| TGCACCCATACAATATTAGG+CGG | + | chr3.1:65728702-65728721 | MS.gene79865:intron | 40.0% | |
| TGCTGCTATTCACCAATAAC+TGG | - | chr3.1:65728556-65728575 | None:intergenic | 40.0% | |
| TTACAGGTCCAAGAATATCC+CGG | + | chr3.1:65729219-65729238 | MS.gene79865:intron | 40.0% | |
| TTATGTTGTGAGCTGATGAG+GGG | + | chr3.1:65728664-65728683 | MS.gene79865:intron | 40.0% | |
| TTCCAGGGTGAAATTAAACC+AGG | + | chr3.1:65729554-65729573 | MS.gene79865:intron | 40.0% | |
| TTCTGAGTGTCTCTAATCTC+TGG | - | chr3.1:65727989-65728008 | None:intergenic | 40.0% | |
| ! | AAAGGGGTATGAGATGGTAA+GGG | - | chr3.1:65730037-65730056 | None:intergenic | 40.0% |
| ! | AATGGTTTAAAACCAGGTGG+AGG | - | chr3.1:65728343-65728362 | None:intergenic | 40.0% |
| ! | ACACCTTTTGTAGATTCGTG+TGG | + | chr3.1:65727931-65727950 | MS.gene79865:intron | 40.0% |
| ! | ACCCCTTTATTTGCTTCTTC+TGG | + | chr3.1:65730049-65730068 | MS.gene79865:CDS | 40.0% |
| ! | AGCTGATGAGGGGAAATTTT+AGG | + | chr3.1:65728674-65728693 | MS.gene79865:intron | 40.0% |
| ! | ATATGGAAATGTAGGGTGTC+TGG | - | chr3.1:65731094-65731113 | None:intergenic | 40.0% |
| ! | CACCTTCTGTATCTGTTTCT+GGG | + | chr3.1:65729864-65729883 | MS.gene79865:CDS | 40.0% |
| ! | CACTTGATAGTAGTCTGCAT+TGG | - | chr3.1:65730863-65730882 | None:intergenic | 40.0% |
| ! | GAGTGCTGTAAGATTTGTGT+CGG | - | chr3.1:65730241-65730260 | None:intergenic | 40.0% |
| ! | GCAAATAAAGGGGTATGAGA+TGG | - | chr3.1:65730043-65730062 | None:intergenic | 40.0% |
| ! | GTGGCTTTTATTCTGCATCA+AGG | + | chr3.1:65729491-65729510 | MS.gene79865:intron | 40.0% |
| ! | GTTAATGGCTGGTTAGCTAT+TGG | - | chr3.1:65730460-65730479 | None:intergenic | 40.0% |
| ! | TAAAGGGGTATGAGATGGTA+AGG | - | chr3.1:65730038-65730057 | None:intergenic | 40.0% |
| ! | TATGGAAATGTAGGGTGTCT+GGG | - | chr3.1:65731093-65731112 | None:intergenic | 40.0% |
| ! | TGCAACCCCTATCTTTTGAT+TGG | + | chr3.1:65729341-65729360 | MS.gene79865:intron | 40.0% |
| ! | TGGCCAAGTTTTGCATTTGA+GGG | - | chr3.1:65731179-65731198 | None:intergenic | 40.0% |
| ! | TGGCCTCAAACAAATCCTTT+TGG | + | chr3.1:65730265-65730284 | MS.gene79865:CDS | 40.0% |
| ! | TTCGTGATGGAAAATGCTGT+CGG | + | chr3.1:65728882-65728901 | MS.gene79865:intron | 40.0% |
| !! | ACCTTCTGTATCTGTTTCTG+GGG | + | chr3.1:65729865-65729884 | MS.gene79865:CDS | 40.0% |
| !! | CTTGGTTGGCTTAAAGAAAC+TGG | - | chr3.1:65730370-65730389 | None:intergenic | 40.0% |
| !! | GGTCTTATTTATGGGACTGA+AGG | + | chr3.1:65729255-65729274 | MS.gene79865:CDS | 40.0% |
| !! | GTCCTTTGAAAGCTTTGAAG+AGG | - | chr3.1:65730985-65731004 | None:intergenic | 40.0% |
| !! | TAGCAAGGTGTTGTGGATTT+GGG | - | chr3.1:65730087-65730106 | None:intergenic | 40.0% |
| AACCCAGATGAAAGCAAGTC+TGG | + | chr3.1:65728028-65728047 | MS.gene79865:CDS | 45.0% | |
| AAGTCCCACAAATGGGTATG+AGG | + | chr3.1:65731139-65731158 | MS.gene79865:CDS | 45.0% | |
| ACAGGATGCATTTGTCAGGA+AGG | + | chr3.1:65727730-65727749 | MS.gene79865:CDS | 45.0% | |
| AGACACTCAGAACTCAACGT+TGG | + | chr3.1:65727997-65728016 | MS.gene79865:CDS | 45.0% | |
| AGCATCACTTATTCAGGCCT+TGG | - | chr3.1:65727903-65727922 | None:intergenic | 45.0% | |
| AGGTGATAATCAGAAGCGAC+TGG | + | chr3.1:65729275-65729294 | MS.gene79865:CDS | 45.0% | |
| AGTAGCTTGACTGTTTGGTC+TGG | - | chr3.1:65730890-65730909 | None:intergenic | 45.0% | |
| ATACGCCCACGTAAAACCAT+TGG | + | chr3.1:65730789-65730808 | MS.gene79865:CDS | 45.0% | |
| ATATTGCCGTGAGGGGTTAA+TGG | - | chr3.1:65730475-65730494 | None:intergenic | 45.0% | |
| ATGTCAACTCACCGTTACAG+AGG | - | chr3.1:65729681-65729700 | None:intergenic | 45.0% | |
| ATTAACCCCTCACGGCAATA+TGG | + | chr3.1:65730474-65730493 | MS.gene79865:CDS | 45.0% | |
| CACCCTACATTTCCATATGC+TGG | + | chr3.1:65731096-65731115 | MS.gene79865:CDS | 45.0% | |
| CCACACCAGAAAGGTAATTC+TGG | + | chr3.1:65731363-65731382 | MS.gene79865:CDS | 45.0% | |
| CCAGTTGAATGAACAGTACC+TGG | - | chr3.1:65730673-65730692 | None:intergenic | 45.0% | |
| CCATACAATATTAGGCGGTG+AGG | + | chr3.1:65728707-65728726 | MS.gene79865:intron | 45.0% | |
| CCGAGGAGCTAAAAAAGATG+GGG | + | chr3.1:65727637-65727656 | MS.gene79865:CDS | 45.0% | |
| CCTCACCGCCTAATATTGTA+TGG | - | chr3.1:65728710-65728729 | None:intergenic | 45.0% | |
| CTATAAGGCCCACAAAACCT+TGG | - | chr3.1:65728637-65728656 | None:intergenic | 45.0% | |
| CTGACAAATGCATCCTGTGT+CGG | - | chr3.1:65727728-65727747 | None:intergenic | 45.0% | |
| CTTACAAGACCCGTTTCTCT+CGG | + | chr3.1:65730523-65730542 | MS.gene79865:CDS | 45.0% | |
| CTTCCATTAGCTCAGCAATC+AGG | + | chr3.1:65730745-65730764 | MS.gene79865:CDS | 45.0% | |
| CTTGGCGAAGGAAATGAAAC+AGG | - | chr3.1:65730712-65730731 | None:intergenic | 45.0% | |
| GAAGGGCTCATTGTTTGTGA+TGG | - | chr3.1:65730124-65730143 | None:intergenic | 45.0% | |
| GAATGAACAGTACCTGGCAT+TGG | - | chr3.1:65730667-65730686 | None:intergenic | 45.0% | |
| GATTGCTGAGCTAATGGAAG+TGG | - | chr3.1:65730745-65730764 | None:intergenic | 45.0% | |
| GCTAAAAAAGATGGGGCTAC+TGG | + | chr3.1:65727644-65727663 | MS.gene79865:CDS | 45.0% | |
| GGTCCACACGAATCTACAAA+AGG | - | chr3.1:65727937-65727956 | None:intergenic | 45.0% | |
| GTAGCTTGACTGTTTGGTCT+GGG | - | chr3.1:65730889-65730908 | None:intergenic | 45.0% | |
| GTCGATTGTGCATACCTCTT+TGG | - | chr3.1:65731212-65731231 | None:intergenic | 45.0% | |
| GTTTAGCAACAATCCCTCCT+TGG | + | chr3.1:65731272-65731291 | MS.gene79865:CDS | 45.0% | |
| TAATCAGAAGCGACTGGAGA+AGG | + | chr3.1:65729281-65729300 | MS.gene79865:CDS | 45.0% | |
| TACAGGTCCAAGAATATCCC+GGG | + | chr3.1:65729220-65729239 | MS.gene79865:intron | 45.0% | |
| TCAGGCACAGCAAACCTAAA+TGG | - | chr3.1:65730958-65730977 | None:intergenic | 45.0% | |
| TCCCCAGAAACAGATACAGA+AGG | - | chr3.1:65729869-65729888 | None:intergenic | 45.0% | |
| TGATGTGGATGAATACTGCC+AGG | - | chr3.1:65730607-65730626 | None:intergenic | 45.0% | |
| TGCATACCTCTTTGGACATC+AGG | - | chr3.1:65731204-65731223 | None:intergenic | 45.0% | |
| TGCATTTGTCAGGAAGGCTA+AGG | + | chr3.1:65727736-65727755 | MS.gene79865:CDS | 45.0% | |
| TGCCCCTCAAATGCAAAACT+TGG | + | chr3.1:65731173-65731192 | MS.gene79865:CDS | 45.0% | |
| TGCTGTAAGATTTGTGTCGG+TGG | - | chr3.1:65730238-65730257 | None:intergenic | 45.0% | |
| TTAACCCCTCACGGCAATAT+GGG | + | chr3.1:65730475-65730494 | MS.gene79865:CDS | 45.0% | |
| TTAAGCCAACCAAGACCAAC+TGG | + | chr3.1:65730376-65730395 | MS.gene79865:CDS | 45.0% | |
| TTATTCAGGCCTTGGAAACG+AGG | - | chr3.1:65727895-65727914 | None:intergenic | 45.0% | |
| TTCCATCACGAAAACAGCCA+AGG | - | chr3.1:65728874-65728893 | None:intergenic | 45.0% | |
| TTTCTCTCCTGTGTCTGCTT+TGG | - | chr3.1:65729457-65729476 | None:intergenic | 45.0% | |
| ! | AAGTTTTGCATTTGAGGGGC+AGG | - | chr3.1:65731174-65731193 | None:intergenic | 45.0% |
| ! | AGAGAAACGGGTCTTGTAAG+GGG | - | chr3.1:65730523-65730542 | None:intergenic | 45.0% |
| ! | AGCCAGACTTGCTTTCATCT+GGG | - | chr3.1:65728033-65728052 | None:intergenic | 45.0% |
| ! | ATTATTAAGGGGTGTGGCCA+AGG | + | chr3.1:65728617-65728636 | MS.gene79865:intron | 45.0% |
| ! | CCAGAATTACCTTTCTGGTG+TGG | - | chr3.1:65731366-65731385 | None:intergenic | 45.0% |
| ! | CCAGGTACTGTTCATTCAAC+TGG | + | chr3.1:65730670-65730689 | MS.gene79865:CDS | 45.0% |
| ! | CTGGCCAAGTTTTGCATTTG+AGG | - | chr3.1:65731180-65731199 | None:intergenic | 45.0% |
| ! | GAATTACCTTTCTGGTGTGG+AGG | - | chr3.1:65731363-65731382 | None:intergenic | 45.0% |
| ! | GAGAGAAACGGGTCTTGTAA+GGG | - | chr3.1:65730524-65730543 | None:intergenic | 45.0% |
| ! | GGCCAAGTTTTGCATTTGAG+GGG | - | chr3.1:65731178-65731197 | None:intergenic | 45.0% |
| ! | TGCCTGGTTTAATTTCACCC+TGG | - | chr3.1:65729559-65729578 | None:intergenic | 45.0% |
| ! | TGTAAGATTTGTGTCGGTGG+TGG | - | chr3.1:65730235-65730254 | None:intergenic | 45.0% |
| ! | TGTCAGGAAGGCTAAGGTTT+TGG | + | chr3.1:65727742-65727761 | MS.gene79865:CDS | 45.0% |
| ! | TTGGCATTGCAGGTGTTTTC+TGG | + | chr3.1:65727761-65727780 | MS.gene79865:intron | 45.0% |
| ! | TTTTACGTGGGCGTATTGAG+AGG | - | chr3.1:65730785-65730804 | None:intergenic | 45.0% |
| !! | AAGCTTTGAAGAGGCTGATC+AGG | - | chr3.1:65730976-65730995 | None:intergenic | 45.0% |
| !! | AGCAAGGTGTTGTGGATTTG+GGG | - | chr3.1:65730086-65730105 | None:intergenic | 45.0% |
| !! | CTAGCAAGGTGTTGTGGATT+TGG | - | chr3.1:65730088-65730107 | None:intergenic | 45.0% |
| !! | GAGAGCTTTTGGCTACTAGA+AGG | - | chr3.1:65727548-65727567 | None:intergenic | 45.0% |
| !! | GCTGATTTGGAATAAACGGG+TGG | - | chr3.1:65730195-65730214 | None:intergenic | 45.0% |
| !! | TTCCTTGGCTGTTTTCGTGA+TGG | + | chr3.1:65728869-65728888 | MS.gene79865:intron | 45.0% |
| !!! | CCCCATCTTTTTTAGCTCCT+CGG | - | chr3.1:65727640-65727659 | None:intergenic | 45.0% |
| !! | ATTTAATATATACATTTATT+AGG | + | chr3.1:65729401-65729420 | MS.gene79865:intron | 5.0% |
| AACAATCCCTCCTTGGCTTC+CGG | + | chr3.1:65731279-65731298 | MS.gene79865:CDS | 50.0% | |
| AACCAGCCATTAACCCCTCA+CGG | + | chr3.1:65730466-65730485 | MS.gene79865:CDS | 50.0% | |
| AACGGGTGGAATCCAGAAAC+AGG | - | chr3.1:65730181-65730200 | None:intergenic | 50.0% | |
| AAGCTTGAGATGGATCCAGC+TGG | - | chr3.1:65731020-65731039 | None:intergenic | 50.0% | |
| AATGCATCCTGTGTCGGATC+AGG | - | chr3.1:65727722-65727741 | None:intergenic | 50.0% | |
| ACCTAGACCACCATCGTCTT+TGG | + | chr3.1:65730639-65730658 | MS.gene79865:CDS | 50.0% | |
| ACCTCTTTGGACATCAGGAC+TGG | - | chr3.1:65731199-65731218 | None:intergenic | 50.0% | |
| AGCAACATATTTGGCTGGGG+TGG | - | chr3.1:65730574-65730593 | None:intergenic | 50.0% | |
| AGTCAAGCTACTACTCAGGG+TGG | + | chr3.1:65730898-65730917 | MS.gene79865:CDS | 50.0% | |
| ATTCAGGGGAATTCAGCTGC+TGG | + | chr3.1:65729836-65729855 | MS.gene79865:intron | 50.0% | |
| ATTGGGCTGCTGTCCTTGAA+AGG | - | chr3.1:65730845-65730864 | None:intergenic | 50.0% | |
| ATTGGTCCCAAAGACGATGG+TGG | - | chr3.1:65730649-65730668 | None:intergenic | 50.0% | |
| ATTTGGTCTGCAGGATGTGC+TGG | - | chr3.1:65731309-65731328 | None:intergenic | 50.0% | |
| CACTCAGAACTCAACGTTGG+TGG | + | chr3.1:65728000-65728019 | MS.gene79865:CDS | 50.0% | |
| CATGGAACCAAAGCAGACAC+AGG | + | chr3.1:65729447-65729466 | MS.gene79865:CDS | 50.0% | |
| CCTAGACCACCATCGTCTTT+GGG | + | chr3.1:65730640-65730659 | MS.gene79865:CDS | 50.0% | |
| CGACAAAGCTATCCTGCTCA+GGG | + | chr3.1:65731228-65731247 | MS.gene79865:CDS | 50.0% | |
| CGACACAGGATGCATTTGTC+AGG | + | chr3.1:65727726-65727745 | MS.gene79865:CDS | 50.0% | |
| CTCGAAAAGCGGGAAGCAAT+AGG | + | chr3.1:65728189-65728208 | MS.gene79865:CDS | 50.0% | |
| CTGAGCTAATGGAAGTGGAG+GGG | - | chr3.1:65730740-65730759 | None:intergenic | 50.0% | |
| GACGGCGATATACCAGACAA+AGG | - | chr3.1:65730436-65730455 | None:intergenic | 50.0% | |
| GCAGAGACGTAAGCTTGAGA+TGG | - | chr3.1:65731030-65731049 | None:intergenic | 50.0% | |
| GCAGCCAGTACACAAATGCA+AGG | + | chr3.1:65729977-65729996 | MS.gene79865:CDS | 50.0% | |
| GCCTCCATGCCTTCAAATTC+GGG | + | chr3.1:65730811-65730830 | MS.gene79865:CDS | 50.0% | |
| GCGTATTGAGAGGCAGAAGT+AGG | - | chr3.1:65730775-65730794 | None:intergenic | 50.0% | |
| GCGTTGAAGAGACTGATGTC+TGG | - | chr3.1:65730408-65730427 | None:intergenic | 50.0% | |
| GCTGAGCTAATGGAAGTGGA+GGG | - | chr3.1:65730741-65730760 | None:intergenic | 50.0% | |
| GGAAGTGGAGGGGATATTCT+TGG | - | chr3.1:65730730-65730749 | None:intergenic | 50.0% | |
| GGCACAGCAAACCTAAATGG+CGG | - | chr3.1:65730955-65730974 | None:intergenic | 50.0% | |
| GGCCTCCATGCCTTCAAATT+CGG | + | chr3.1:65730810-65730829 | MS.gene79865:CDS | 50.0% | |
| GGTGACATTCCTGCATGATG+TGG | - | chr3.1:65730622-65730641 | None:intergenic | 50.0% | |
| TAACCCCTCACGGCAATATG+GGG | + | chr3.1:65730476-65730495 | MS.gene79865:CDS | 50.0% | |
| TCAACGCCTCAACCTTTGTC+TGG | + | chr3.1:65730421-65730440 | MS.gene79865:CDS | 50.0% | |
| TCGACAAAGCTATCCTGCTC+AGG | + | chr3.1:65731227-65731246 | MS.gene79865:CDS | 50.0% | |
| TGCTGAGCTAATGGAAGTGG+AGG | - | chr3.1:65730742-65730761 | None:intergenic | 50.0% | |
| TGGAATCCAGAAACAGGTGG+AGG | - | chr3.1:65730175-65730194 | None:intergenic | 50.0% | |
| TGGTTGTGGACCGAGAGAAA+CGG | - | chr3.1:65730536-65730555 | None:intergenic | 50.0% | |
| TTGAGATGGATCCAGCTGGT+TGG | - | chr3.1:65731016-65731035 | None:intergenic | 50.0% | |
| ! | ACGTCTCTGCTGCTCCTTTT+GGG | + | chr3.1:65731040-65731059 | MS.gene79865:CDS | 50.0% |
| ! | CGAGAGAAACGGGTCTTGTA+AGG | - | chr3.1:65730525-65730544 | None:intergenic | 50.0% |
| ! | CTGCAGGTTGAAACACAGCT+TGG | - | chr3.1:65729961-65729980 | None:intergenic | 50.0% |
| ! | GAAAATGGGGTGCTCTAGCA+AGG | - | chr3.1:65730102-65730121 | None:intergenic | 50.0% |
| ! | GAGCCAGACTTGCTTTCATC+TGG | - | chr3.1:65728034-65728053 | None:intergenic | 50.0% |
| ! | GATGTCTGGAGTTGTCCAGT+TGG | - | chr3.1:65730394-65730413 | None:intergenic | 50.0% |
| ! | GGCTGGTTAGCTATTGGTGA+CGG | - | chr3.1:65730454-65730473 | None:intergenic | 50.0% |
| ! | GTGATGGAAAATGCTGTCGG+AGG | + | chr3.1:65728885-65728904 | MS.gene79865:intron | 50.0% |
| ! | TACGTCTCTGCTGCTCCTTT+TGG | + | chr3.1:65731039-65731058 | MS.gene79865:CDS | 50.0% |
| ! | TCCCGAATTTGAAGGCATGG+AGG | - | chr3.1:65730815-65730834 | None:intergenic | 50.0% |
| ! | TGGAGTTGTCCAGTTGGTCT+TGG | - | chr3.1:65730388-65730407 | None:intergenic | 50.0% |
| ! | TGTGGAGGTGCAACAGATGT+AGG | - | chr3.1:65731348-65731367 | None:intergenic | 50.0% |
| ! | TTTGAAGGCATGGAGGCCAA+TGG | - | chr3.1:65730808-65730827 | None:intergenic | 50.0% |
| !! | ATGTTGCTGATTCCACGACC+TGG | + | chr3.1:65730586-65730605 | MS.gene79865:CDS | 50.0% |
| !! | GCAAGGTGTTGTGGATTTGG+GGG | - | chr3.1:65730085-65730104 | None:intergenic | 50.0% |
| !! | GGAGGCCAATGGTTTTACGT+GGG | - | chr3.1:65730797-65730816 | None:intergenic | 50.0% |
| !! | GGCTAAGGTTTTGGCATTGC+AGG | + | chr3.1:65727751-65727770 | MS.gene79865:CDS | 50.0% |
| !! | GTTGTCCAGTTGGTCTTGGT+TGG | - | chr3.1:65730384-65730403 | None:intergenic | 50.0% |
| !! | TGCATTTGTGTACTGGCTGC+AGG | - | chr3.1:65729977-65729996 | None:intergenic | 50.0% |
| !! | TGCTCCTTTTGGGGGAAGTT+CGG | + | chr3.1:65731050-65731069 | MS.gene79865:CDS | 50.0% |
| !! | TGGAGGCCAATGGTTTTACG+TGG | - | chr3.1:65730798-65730817 | None:intergenic | 50.0% |
| ACCAGGTGGAGGCTTGTAAC+TGG | - | chr3.1:65728332-65728351 | None:intergenic | 55.0% | |
| CACACGAGTCCTCGTTTCCA+AGG | + | chr3.1:65727883-65727902 | MS.gene79865:intron | 55.0% | |
| CCAGGTGGAGGCTTGTAACT+GGG | - | chr3.1:65728331-65728350 | None:intergenic | 55.0% | |
| GAACCCGAACTTCCCCCAAA+AGG | - | chr3.1:65731057-65731076 | None:intergenic | 55.0% | |
| GACACAAGTCTCCAACCAGC+TGG | + | chr3.1:65731002-65731021 | MS.gene79865:CDS | 55.0% | |
| GCCAGTCCTGATGTCCAAAG+AGG | + | chr3.1:65731195-65731214 | MS.gene79865:CDS | 55.0% | |
| GCTCAACCTCCACCTGTTTC+TGG | + | chr3.1:65730166-65730185 | MS.gene79865:CDS | 55.0% | |
| GGAGGGGATATTCTTGGCGA+AGG | - | chr3.1:65730724-65730743 | None:intergenic | 55.0% | |
| GGATGAATACTGCCAGGTCG+TGG | - | chr3.1:65730601-65730620 | None:intergenic | 55.0% | |
| GGGTGGAATCCAGAAACAGG+TGG | - | chr3.1:65730178-65730197 | None:intergenic | 55.0% | |
| GGTACACAAGAGCCACCTTC+TGG | + | chr3.1:65730919-65730938 | MS.gene79865:CDS | 55.0% | |
| GGTGGCCCAACTTGACCAAA+AGG | - | chr3.1:65730283-65730302 | None:intergenic | 55.0% | |
| GGTTGTGGACCGAGAGAAAC+GGG | - | chr3.1:65730535-65730554 | None:intergenic | 55.0% | |
| GTTGCACCTCCACACCAGAA+AGG | + | chr3.1:65731354-65731373 | MS.gene79865:CDS | 55.0% | |
| ! | CCCAAAGACGATGGTGGTCT+AGG | - | chr3.1:65730643-65730662 | None:intergenic | 55.0% |
| ! | CGTCTCTGCTGCTCCTTTTG+GGG | + | chr3.1:65731041-65731060 | MS.gene79865:CDS | 55.0% |
| ! | GCATCTCTTGGTAACCGCAC+TGG | - | chr3.1:65729589-65729608 | None:intergenic | 55.0% |
| ! | GGAAATGTAGGGTGTCTGGG+TGG | - | chr3.1:65731090-65731109 | None:intergenic | 55.0% |
| ! | GGGACTTGAGATCTTGGTGC+AGG | - | chr3.1:65731126-65731145 | None:intergenic | 55.0% |
| ! | GGTGCAGGTTGACCAGCATA+TGG | - | chr3.1:65731111-65731130 | None:intergenic | 55.0% |
| ! | GTCTCTGCTGCTCCTTTTGG+GGG | + | chr3.1:65731042-65731061 | MS.gene79865:CDS | 55.0% |
| !! | GCTCCTTTTGGGGGAAGTTC+GGG | + | chr3.1:65731051-65731070 | MS.gene79865:CDS | 55.0% |
| !! | GGCATTGGTCCCAAAGACGA+TGG | - | chr3.1:65730652-65730671 | None:intergenic | 55.0% |
| !! | GGGTGTGGCCAAGGTTTTGT+GGG | + | chr3.1:65728626-65728645 | MS.gene79865:intron | 55.0% |
| !! | GGTGCTCTAGCAAGGTGTTG+TGG | - | chr3.1:65730094-65730113 | None:intergenic | 55.0% |
| !! | TCGTCTTTGGGACCAATGCC+AGG | + | chr3.1:65730652-65730671 | MS.gene79865:CDS | 55.0% |
| !! | TGCAGGATGTGCTGGCTTAC+CGG | - | chr3.1:65731301-65731320 | None:intergenic | 55.0% |
| AACCTAAATGGCGGCGTGCG+CGG | - | chr3.1:65730946-65730965 | None:intergenic | 60.0% | |
| ATCGGCCCCATATTGCCGTG+AGG | - | chr3.1:65730484-65730503 | None:intergenic | 60.0% | |
| ATGGGGACCTGATCCGACAC+AGG | + | chr3.1:65727712-65727731 | MS.gene79865:CDS | 60.0% | |
| CCCAGTTACAAGCCTCCACC+TGG | + | chr3.1:65728328-65728347 | MS.gene79865:CDS | 60.0% | |
| GCTATCCTGCTCAGGGAGCA+TGG | + | chr3.1:65731235-65731254 | MS.gene79865:CDS | 60.0% | |
| GGCTTACCGGAAGCCAAGGA+GGG | - | chr3.1:65731288-65731307 | None:intergenic | 60.0% | |
| TCACGGCAATATGGGGCCGA+TGG | + | chr3.1:65730483-65730502 | MS.gene79865:CDS | 60.0% | |
| TCGGCCCCATATTGCCGTGA+GGG | - | chr3.1:65730483-65730502 | None:intergenic | 60.0% | |
| TGCCGTGAGGGGTTAATGGC+TGG | - | chr3.1:65730471-65730490 | None:intergenic | 60.0% | |
| TGGCTTACCGGAAGCCAAGG+AGG | - | chr3.1:65731289-65731308 | None:intergenic | 60.0% | |
| ! | GGGGTGTGGCCAAGGTTTTG+TGG | + | chr3.1:65728625-65728644 | MS.gene79865:intron | 60.0% |
| ! | GGTCTTGTAAGGGGAGCTGC+CGG | - | chr3.1:65730514-65730533 | None:intergenic | 60.0% |
| !! | CCAGGCACTGATGTCCAGTG+CGG | + | chr3.1:65729572-65729591 | MS.gene79865:CDS | 60.0% |
| !! | TGCTGGCTTACCGGAAGCCA+AGG | - | chr3.1:65731292-65731311 | None:intergenic | 60.0% |
| AGAGGCCATGCTCCCTGAGC+AGG | - | chr3.1:65731243-65731262 | None:intergenic | 65.0% | |
| CCGCACTGGACATCAGTGCC+TGG | - | chr3.1:65729575-65729594 | None:intergenic | 65.0% | |
| CGGCCCCATATTGCCGTGAG+GGG | - | chr3.1:65730482-65730501 | None:intergenic | 65.0% | |
| CTTGTAAGGGGAGCTGCCGG+TGG | - | chr3.1:65730511-65730530 | None:intergenic | 65.0% | |
| TATGGGGCCGATGGCTCCAC+CGG | + | chr3.1:65730492-65730511 | MS.gene79865:CDS | 65.0% | |
| GGAGCTGCCGGTGGAGCCAT+CGG | - | chr3.1:65730502-65730521 | None:intergenic | 70.0% | |
| GTCCGCGCACGCCGCCATTT+AGG | + | chr3.1:65730941-65730960 | MS.gene79865:CDS | 70.0% | |
| GGCGTGCGCGGACCAGAAGG+TGG | - | chr3.1:65730934-65730953 | None:intergenic | 75.0% | |
| ! | GGCGGCGTGCGCGGACCAGA+AGG | - | chr3.1:65730937-65730956 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 65727521 | 65731392 | 65727521 | ID=MS.gene79865 |
| chr3.1 | mRNA | 65727521 | 65731392 | 65727521 | ID=MS.gene79865.t1;Parent=MS.gene79865 |
| chr3.1 | exon | 65727521 | 65727772 | 65727521 | ID=MS.gene79865.t1.exon1;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65727521 | 65727772 | 65727521 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| chr3.1 | exon | 65727944 | 65728069 | 65727944 | ID=MS.gene79865.t1.exon2;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65727944 | 65728069 | 65727944 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| chr3.1 | exon | 65728171 | 65728210 | 65728171 | ID=MS.gene79865.t1.exon3;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65728171 | 65728210 | 65728171 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| chr3.1 | exon | 65728308 | 65728390 | 65728308 | ID=MS.gene79865.t1.exon4;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65728308 | 65728390 | 65728308 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| chr3.1 | exon | 65729225 | 65729302 | 65729225 | ID=MS.gene79865.t1.exon5;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65729225 | 65729302 | 65729225 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| chr3.1 | exon | 65729423 | 65729476 | 65729423 | ID=MS.gene79865.t1.exon6;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65729423 | 65729476 | 65729423 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| chr3.1 | exon | 65729560 | 65729688 | 65729560 | ID=MS.gene79865.t1.exon7;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65729560 | 65729688 | 65729560 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| chr3.1 | exon | 65729842 | 65731392 | 65729842 | ID=MS.gene79865.t1.exon8;Parent=MS.gene79865.t1 |
| chr3.1 | CDS | 65729842 | 65731392 | 65729842 | ID=cds.MS.gene79865.t1;Parent=MS.gene79865.t1 |
| Gene Sequence |
| Protein sequence |
