AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80488

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80488.t1 MTR_6g043240 95.455 352 16 0 1 352 1 352 0.0 692
MS.gene80488.t1 MTR_6g043280 69.069 333 100 2 1 331 1 332 6.75e-167 469
MS.gene80488.t1 MTR_6g043460 55.294 340 143 2 1 337 1 334 1.21e-130 377
MS.gene80488.t1 MTR_2g029815 46.201 329 154 9 37 346 24 348 6.97e-83 256
MS.gene80488.t1 MTR_2g029820 46.483 327 149 9 42 346 29 351 4.08e-81 251
MS.gene80488.t1 MTR_2g029830 43.902 328 160 10 42 349 28 351 4.29e-78 243
MS.gene80488.t1 MTR_5g017860 44.625 307 158 4 36 331 21 326 4.45e-78 243
MS.gene80488.t1 MTR_2g029730 41.618 346 179 7 14 346 6 341 1.35e-77 242
MS.gene80488.t1 MTR_5g017850 42.997 307 163 4 36 331 21 326 2.82e-76 238
MS.gene80488.t1 MTR_2g029560 43.210 324 159 9 23 332 14 326 2.81e-75 236
MS.gene80488.t1 MTR_2g029750 43.302 321 165 8 42 347 29 347 1.15e-74 234
MS.gene80488.t1 MTR_1g077000 41.017 295 163 6 42 331 39 327 3.33e-74 233
MS.gene80488.t1 MTR_4g125940 42.951 305 156 8 42 331 28 329 3.96e-73 230
MS.gene80488.t1 MTR_2g029860 43.218 317 164 8 42 344 29 343 2.09e-72 229
MS.gene80488.t1 MTR_2g029800 43.492 315 160 8 42 342 29 339 2.74e-72 228
MS.gene80488.t1 MTR_4g087965 39.088 307 172 5 38 329 38 344 3.56e-72 228
MS.gene80488.t1 MTR_2g029740 44.590 305 151 8 46 336 33 333 5.66e-72 228
MS.gene80488.t1 MTR_1g054205 39.017 346 178 8 1 332 1 327 5.84e-72 227
MS.gene80488.t1 MTR_2g084080 39.818 329 181 7 8 331 1 317 1.15e-71 226
MS.gene80488.t1 MTR_5g022870 40.728 302 163 6 40 331 21 316 1.23e-71 226
MS.gene80488.t1 MTR_0155s0040 38.644 295 172 4 41 331 26 315 2.07e-71 225
MS.gene80488.t1 MTR_2g029850 44.737 304 154 8 42 332 29 331 3.61e-71 226
MS.gene80488.t1 MTR_8g075100 40.000 300 164 6 42 331 26 319 3.70e-71 224
MS.gene80488.t1 MTR_2g028980 44.079 304 154 7 46 336 33 333 6.11e-71 225
MS.gene80488.t1 MTR_4g132490 40.523 306 167 6 39 331 24 327 3.41e-70 222
MS.gene80488.t1 MTR_7g086870 38.832 291 176 2 42 331 22 311 2.06e-69 220
MS.gene80488.t1 MTR_4g095450 42.088 297 164 5 42 330 27 323 2.28e-69 220
MS.gene80488.t1 MTR_3g092990 42.244 303 160 7 42 331 26 326 3.77e-69 219
MS.gene80488.t1 MTR_2g084110 41.017 295 167 5 42 331 25 317 4.37e-69 219
MS.gene80488.t1 MTR_7g093370 38.393 336 180 7 11 332 50 372 8.16e-69 220
MS.gene80488.t1 MTR_5g016010 39.091 330 180 8 15 330 6 328 2.15e-68 218
MS.gene80488.t1 MTR_2g084090 40.952 315 171 8 24 331 12 318 3.00e-68 217
MS.gene80488.t1 MTR_4g114210 40.728 302 165 5 42 331 21 320 3.74e-68 217
MS.gene80488.t1 MTR_7g086820 40.594 303 169 5 36 331 14 312 5.97e-68 216
MS.gene80488.t1 MTR_4g127670 41.000 300 167 4 42 331 24 323 8.40e-68 216
MS.gene80488.t1 MTR_2g029910 40.541 333 170 8 24 331 3 332 1.22e-67 216
MS.gene80488.t1 MTR_4g029170 37.461 323 193 6 16 331 1 321 1.40e-67 215
MS.gene80488.t1 MTR_2g040000 39.091 330 180 8 17 331 8 331 1.41e-67 216
MS.gene80488.t1 MTR_5g021060 39.203 301 164 7 46 331 34 330 2.73e-67 215
MS.gene80488.t1 MTR_1g101830 37.888 322 175 7 21 331 15 322 2.84e-67 214
MS.gene80488.t1 MTR_1g086320 41.311 305 163 7 42 331 30 333 3.36e-67 215
MS.gene80488.t1 MTR_2g008710 39.274 303 171 4 40 331 25 325 3.97e-67 214
MS.gene80488.t1 MTR_2g084000 37.952 332 186 7 6 331 2 319 1.66e-66 213
MS.gene80488.t1 MTR_1g009750 39.404 302 171 5 42 331 27 328 4.88e-66 212
MS.gene80488.t1 MTR_8g076820 39.333 300 165 7 46 331 34 330 1.39e-65 211
MS.gene80488.t1 MTR_3g466200 39.933 298 169 5 42 331 25 320 1.57e-65 210
MS.gene80488.t1 MTR_1g025980 40.000 305 164 9 38 330 20 317 2.16e-65 209
MS.gene80488.t1 MTR_1g090760 37.294 303 177 5 42 331 28 330 2.69e-65 210
MS.gene80488.t1 MTR_7g029030 39.527 296 173 4 42 331 25 320 7.62e-65 208
MS.gene80488.t1 MTR_2g088770 40.066 302 167 7 42 331 26 325 1.36e-64 208
MS.gene80488.t1 MTR_5g074970 40.134 299 168 5 42 331 30 326 1.39e-64 208
MS.gene80488.t1 MTR_2g437770 38.255 298 172 5 42 332 50 342 1.43e-64 208
MS.gene80488.t1 MTR_4g125940 44.280 271 133 8 76 331 7 274 1.60e-64 206
MS.gene80488.t1 MTR_2g084010 40.273 293 167 6 45 331 28 318 1.61e-64 207
MS.gene80488.t1 MTR_4g029200 40.667 300 171 5 37 331 41 338 1.68e-64 208
MS.gene80488.t1 MTR_3g094650 37.425 334 186 8 1 327 1 318 3.75e-64 206
MS.gene80488.t1 MTR_1g086490 40.385 312 163 7 42 331 30 340 6.39e-64 207
MS.gene80488.t1 MTR_1g022970 41.118 304 165 6 41 331 45 347 7.11e-64 207
MS.gene80488.t1 MTR_7g107520 39.535 301 166 7 42 331 25 320 7.60e-64 206
MS.gene80488.t1 MTR_3g072190 37.690 329 189 7 8 331 1 318 2.63e-63 204
MS.gene80488.t1 MTR_2g084020 39.172 314 178 7 24 331 12 318 7.79e-63 203
MS.gene80488.t1 MTR_4g122640 38.538 301 172 8 42 331 38 336 1.28e-62 203
MS.gene80488.t1 MTR_1g066380 36.634 303 181 5 39 332 24 324 1.59e-62 202
MS.gene80488.t1 MTR_1g038680 39.203 301 167 7 46 331 33 332 3.42e-62 202
MS.gene80488.t1 MTR_5g014100 37.864 309 170 8 42 331 26 331 3.69e-62 202
MS.gene80488.t1 MTR_4g031140 36.774 310 179 8 42 339 28 332 5.94e-62 201
MS.gene80488.t1 MTR_4g029180 36.223 323 197 6 16 331 1 321 9.30e-62 200
MS.gene80488.t1 MTR_6g027440 37.954 303 178 4 36 331 15 314 1.07e-61 200
MS.gene80488.t1 MTR_1g066640 37.333 300 177 5 42 332 27 324 1.38e-61 200
MS.gene80488.t1 MTR_5g083860 37.374 297 177 6 42 331 31 325 1.53e-61 200
MS.gene80488.t1 MTR_1g066710 36.667 300 179 5 42 332 27 324 1.82e-61 200
MS.gene80488.t1 MTR_4g029190 39.053 338 189 8 7 331 7 340 2.10e-61 200
MS.gene80488.t1 MTR_4g133800 37.162 296 175 4 43 331 42 333 2.91e-61 199
MS.gene80488.t1 MTR_2g029830 43.110 283 137 10 87 349 5 283 3.06e-61 198
MS.gene80488.t1 MTR_4g046713 35.928 334 188 7 10 331 7 326 3.13e-61 199
MS.gene80488.t1 MTR_4g030890 37.919 298 168 8 46 331 104 396 5.49e-61 201
MS.gene80488.t1 MTR_4g132110 35.455 330 194 7 11 331 9 328 2.92e-60 197
MS.gene80488.t1 MTR_8g062780 34.877 324 199 4 20 331 1 324 2.75e-59 194
MS.gene80488.t1 MTR_3g092990 39.934 303 156 8 42 331 26 315 9.37e-59 192
MS.gene80488.t1 MTR_3g094670 36.449 321 186 7 14 327 9 318 1.02e-58 192
MS.gene80488.t1 MTR_4g132110 34.925 335 194 8 11 331 9 333 4.03e-58 191
MS.gene80488.t1 MTR_7g072480 38.305 295 175 5 42 331 24 316 1.15e-57 189
MS.gene80488.t1 MTR_3g105790 35.976 328 186 5 14 331 9 322 1.26e-57 190
MS.gene80488.t1 MTR_7g072510 36.120 299 184 5 38 331 16 312 3.00e-57 188
MS.gene80488.t1 MTR_4g083710 36.455 299 180 5 42 331 27 324 3.16e-57 189
MS.gene80488.t1 MTR_1g066680 36.333 300 179 6 42 332 27 323 6.40e-57 188
MS.gene80488.t1 MTR_1g009750 37.000 300 164 6 42 331 27 311 2.28e-56 186
MS.gene80488.t1 MTR_2g067440 33.131 329 178 7 42 330 60 386 1.59e-55 186
MS.gene80488.t1 MTR_5g074760 37.908 306 175 10 37 331 20 321 2.48e-55 184
MS.gene80488.t1 MTR_5g049280 34.320 338 194 9 11 331 11 337 2.58e-55 184
MS.gene80488.t1 MTR_1g115900 35.135 333 194 8 7 332 5 322 3.91e-55 184
MS.gene80488.t1 MTR_4g074995 36.577 298 168 6 42 331 24 308 6.85e-55 182
MS.gene80488.t1 MTR_3g094630 35.385 325 192 6 14 331 9 322 7.11e-55 182
MS.gene80488.t1 MTR_7g026990 36.644 292 177 6 46 332 35 323 1.34e-54 182
MS.gene80488.t1 MTR_5g074860 39.130 299 169 9 42 330 29 324 1.56e-54 182
MS.gene80488.t1 MTR_4g074990 35.786 299 166 6 42 331 24 305 5.42e-53 177
MS.gene80488.t1 MTR_3g467600 38.284 303 169 9 42 331 27 324 6.83e-53 177
MS.gene80488.t1 MTR_2g099175 32.635 334 208 7 11 331 6 335 3.65e-52 176
MS.gene80488.t1 MTR_5g074710 36.482 307 178 11 37 331 20 321 4.03e-52 176
MS.gene80488.t1 MTR_0286s0010 34.884 301 185 5 42 331 34 334 6.63e-52 175
MS.gene80488.t1 MTR_6g008075 34.884 301 185 5 42 331 34 334 6.63e-52 175
MS.gene80488.t1 MTR_3g466180 35.168 327 189 8 11 331 14 323 4.32e-51 173
MS.gene80488.t1 MTR_5g074740 36.601 306 179 10 37 331 20 321 1.28e-50 171
MS.gene80488.t1 MTR_2g078610 32.432 333 174 8 42 328 76 403 1.52e-50 174
MS.gene80488.t1 MTR_5g033470 33.987 306 185 6 42 331 73 377 2.04e-50 172
MS.gene80488.t1 MTR_2g077990 32.132 333 175 8 42 328 76 403 3.69e-50 172
MS.gene80488.t1 MTR_1g066380 38.672 256 146 5 86 332 3 256 4.64e-50 168
MS.gene80488.t1 MTR_5g058120 55.844 154 64 1 174 327 6 155 4.80e-49 165
MS.gene80488.t1 MTR_3g072190 38.889 252 147 5 85 331 2 251 7.31e-49 165
MS.gene80488.t1 MTR_2g008730 33.993 303 163 5 40 331 25 301 8.21e-48 164
MS.gene80488.t1 MTR_4g074980 34.915 295 162 8 42 331 25 294 5.66e-47 161
MS.gene80488.t1 MTR_4g074980 38.528 231 131 5 42 263 25 253 1.68e-45 156
MS.gene80488.t1 MTR_2g078280 32.087 321 167 8 42 316 76 391 3.19e-45 159
MS.gene80488.t1 MTR_2g067450 32.566 304 185 8 42 330 11 309 1.31e-42 150
MS.gene80488.t1 MTR_0147s0010 31.546 317 177 7 42 330 77 381 3.35e-41 148
MS.gene80488.t1 MTR_2g008160 30.795 302 195 6 42 331 24 323 3.53e-41 147
MS.gene80488.t1 MTR_3g105790 36.290 248 146 4 94 331 1 246 7.82e-39 139
MS.gene80488.t1 MTR_1g098320 62.887 97 36 0 252 348 45 141 8.59e-37 130
MS.gene80488.t1 MTR_5g074860 33.110 299 148 9 42 330 29 285 2.03e-36 133
MS.gene80488.t1 MTR_2g029880 41.146 192 89 8 152 331 9 188 1.40e-34 126
MS.gene80488.t1 MTR_2g008160 28.956 297 172 8 42 331 24 288 1.40e-31 120
MS.gene80488.t1 MTR_5g074700 35.526 228 127 8 110 331 1 214 4.69e-30 114
MS.gene80488.t1 MTR_3g072210 38.919 185 108 5 151 331 55 238 2.67e-29 113
MS.gene80488.t1 MTR_2g008160 33.714 175 113 2 42 215 24 196 4.11e-28 109
MS.gene80488.t1 MTR_7g072490 34.071 226 92 5 88 310 2 173 3.78e-25 101
MS.gene80488.t1 MTR_3g072260 36.364 143 78 4 8 147 1 133 2.02e-22 92.0
MS.gene80488.t1 MTR_4g114220 46.591 88 39 1 62 149 23 102 1.11e-17 79.3
MS.gene80488.t1 MTR_4g012865 45.588 68 34 1 42 106 77 144 7.17e-17 77.0
MS.gene80488.t1 MTR_7g086790 32.447 188 109 5 89 273 17 189 1.33e-16 77.8
MS.gene80488.t1 MTR_6g048160 49.275 69 33 1 81 149 22 88 5.23e-15 70.1
MS.gene80488.t1 MTR_7g107500 41.667 96 55 1 236 331 3 97 8.94e-15 69.7
MS.gene80488.t1 MTR_4g031040 32.609 138 78 5 130 263 3 129 7.22e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80488.t1 AT1G71695 52.326 344 155 5 13 349 17 358 3.66e-124 361
MS.gene80488.t1 AT5G06730 42.363 347 173 9 1 332 1 335 4.06e-80 249
MS.gene80488.t1 AT2G18980 43.092 304 162 5 38 331 21 323 2.97e-78 243
MS.gene80488.t1 AT5G19890 43.377 302 155 6 42 331 30 327 7.21e-76 237
MS.gene80488.t1 AT4G33420 39.157 332 182 5 4 331 10 325 8.73e-76 237
MS.gene80488.t1 AT5G14130 41.472 299 166 3 42 331 32 330 2.11e-75 236
MS.gene80488.t1 AT5G14130 39.697 330 175 5 11 331 57 371 3.61e-75 236
MS.gene80488.t1 AT4G33420 39.938 323 174 5 13 331 66 372 3.72e-75 236
MS.gene80488.t1 AT4G30170 42.857 301 159 7 42 331 27 325 2.08e-73 231
MS.gene80488.t1 AT5G06720 40.120 334 174 10 14 332 12 334 1.79e-72 228
MS.gene80488.t1 AT1G49570 38.551 345 190 7 4 327 3 346 3.76e-72 228
MS.gene80488.t1 AT5G64120 37.846 325 194 3 13 331 6 328 2.09e-71 226
MS.gene80488.t1 AT2G18140 38.253 332 190 7 13 331 6 335 2.70e-71 226
MS.gene80488.t1 AT4G36430 39.465 299 166 7 46 331 34 330 1.75e-70 223
MS.gene80488.t1 AT2G24800 40.717 307 163 5 39 331 28 329 2.74e-70 223
MS.gene80488.t1 AT2G34060 36.176 340 202 5 5 329 5 344 4.69e-70 223
MS.gene80488.t1 AT5G19880 40.196 306 166 6 42 331 25 329 5.96e-70 222
MS.gene80488.t1 AT2G18150 39.465 299 166 7 46 331 40 336 1.04e-68 219
MS.gene80488.t1 AT4G26010 37.309 327 188 7 9 331 24 337 1.61e-68 218
MS.gene80488.t1 AT4G08780 39.252 321 179 7 42 348 24 342 2.31e-68 218
MS.gene80488.t1 AT5G17820 38.411 302 174 4 36 331 18 313 2.43e-68 217
MS.gene80488.t1 AT4G08770 39.875 321 177 7 42 348 24 342 2.60e-68 218
MS.gene80488.t1 AT4G26010 38.870 301 174 6 35 331 15 309 2.65e-68 217
MS.gene80488.t1 AT3G03670 40.323 310 166 7 36 331 17 321 8.95e-68 216
MS.gene80488.t1 AT5G17820 38.411 302 174 4 36 331 71 366 1.31e-67 217
MS.gene80488.t1 AT5G51890 39.088 307 170 7 37 331 21 322 1.06e-66 213
MS.gene80488.t1 AT5G42180 40.264 303 164 6 39 330 20 316 1.27e-66 213
MS.gene80488.t1 AT1G05260 38.762 307 174 7 37 331 21 325 1.79e-66 213
MS.gene80488.t1 AT2G38390 40.789 304 165 7 42 331 31 333 2.50e-66 213
MS.gene80488.t1 AT2G41480 39.073 302 170 4 42 331 29 328 4.69e-66 212
MS.gene80488.t1 AT3G32980 36.648 352 194 9 7 343 7 344 6.35e-66 212
MS.gene80488.t1 AT5G39580 38.796 299 174 4 40 331 23 319 6.89e-66 211
MS.gene80488.t1 AT3G50990 38.487 304 176 5 39 331 38 341 8.58e-66 211
MS.gene80488.t1 AT3G21770 38.206 301 172 7 42 330 29 327 1.52e-65 210
MS.gene80488.t1 AT4G31760 39.274 303 166 6 42 331 29 326 4.76e-65 209
MS.gene80488.t1 AT5G05340 38.721 297 173 5 42 331 30 324 4.95e-65 209
MS.gene80488.t1 AT5G66390 38.127 299 172 6 45 331 36 333 8.46e-65 209
MS.gene80488.t1 AT4G37530 40.264 303 168 5 42 331 27 329 9.37e-65 208
MS.gene80488.t1 AT3G49120 37.461 323 182 7 42 350 32 348 2.18e-64 208
MS.gene80488.t1 AT1G30870 39.145 304 172 5 37 331 46 345 2.22e-64 208
MS.gene80488.t1 AT3G49960 37.278 338 189 7 8 331 1 329 2.77e-64 207
MS.gene80488.t1 AT2G38380 40.461 304 166 7 42 331 31 333 3.06e-64 207
MS.gene80488.t1 AT4G37520 38.614 303 173 5 42 331 27 329 6.55e-64 206
MS.gene80488.t1 AT4G21960 34.862 327 199 6 14 331 6 327 1.14e-63 206
MS.gene80488.t1 AT4G16270 37.954 303 171 8 42 331 50 348 1.38e-63 206
MS.gene80488.t1 AT3G17070 36.443 343 197 7 3 331 4 339 1.52e-63 206
MS.gene80488.t1 AT5G58390 41.000 300 163 7 42 331 21 316 2.60e-63 204
MS.gene80488.t1 AT5G15180 35.484 341 198 6 1 331 1 329 3.31e-63 204
MS.gene80488.t1 AT3G49110 37.615 327 176 8 42 350 33 349 3.49e-63 205
MS.gene80488.t1 AT5G67400 38.614 303 173 5 42 331 27 329 9.59e-63 203
MS.gene80488.t1 AT2G35380 37.778 315 168 9 37 331 29 335 5.18e-62 201
MS.gene80488.t1 AT1G14550 36.890 328 185 7 12 331 8 321 8.75e-62 201
MS.gene80488.t1 AT5G58400 37.919 298 175 5 42 331 30 325 1.43e-61 200
MS.gene80488.t1 AT5G24070 35.329 334 201 5 11 332 6 336 1.64e-61 200
MS.gene80488.t1 AT4G37520 37.954 303 172 6 42 331 27 326 2.82e-61 199
MS.gene80488.t1 AT4G11290 37.500 304 174 7 42 331 25 326 4.42e-61 199
MS.gene80488.t1 AT3G01190 35.890 326 189 7 15 331 7 321 1.69e-60 197
MS.gene80488.t1 AT1G44970 38.000 300 170 7 46 331 49 346 3.63e-60 197
MS.gene80488.t1 AT2G22420 36.825 315 180 9 38 338 17 326 1.28e-59 195
MS.gene80488.t1 AT1G05240 36.424 302 178 6 42 331 26 325 2.17e-59 194
MS.gene80488.t1 AT1G05250 36.424 302 178 6 42 331 26 325 2.17e-59 194
MS.gene80488.t1 AT1G68850 36.570 309 174 9 42 331 30 335 2.90e-58 192
MS.gene80488.t1 AT2G39040 37.662 308 171 9 42 331 46 350 7.93e-58 191
MS.gene80488.t1 AT3G28200 36.486 296 182 3 42 331 21 316 8.91e-58 190
MS.gene80488.t1 AT5G22410 35.385 325 185 8 15 327 10 321 1.27e-57 190
MS.gene80488.t1 AT2G43480 33.235 340 207 7 6 331 2 335 2.56e-57 189
MS.gene80488.t1 AT4G17690 37.377 305 182 5 34 331 20 322 4.10e-57 189
MS.gene80488.t1 AT5G40150 35.690 297 184 4 42 331 32 328 1.89e-56 187
MS.gene80488.t1 AT1G14540 37.374 297 177 6 42 331 21 315 3.30e-56 186
MS.gene80488.t1 AT1G34510 36.000 300 182 6 36 331 16 309 9.93e-56 184
MS.gene80488.t1 AT2G37130 35.354 297 180 6 45 331 2 296 1.32e-55 184
MS.gene80488.t1 AT2G37130 35.333 300 182 6 42 331 30 327 1.33e-55 185
MS.gene80488.t1 AT1G24110 35.855 304 184 5 42 334 22 325 2.88e-55 184
MS.gene80488.t1 AT5G47000 36.913 298 180 4 42 331 33 330 5.89e-55 183
MS.gene80488.t1 AT1G77100 34.049 326 200 7 14 331 1 319 9.47e-55 182
MS.gene80488.t1 AT5G64100 36.271 295 175 5 46 331 41 331 2.40e-54 181
MS.gene80488.t1 AT5G64110 37.037 297 172 6 46 331 38 330 2.41e-54 181
MS.gene80488.t1 AT4G37530 40.625 256 139 5 42 284 27 282 1.24e-53 178
MS.gene80488.t1 AT4G33870 31.231 333 181 6 42 328 68 398 1.33e-51 176
MS.gene80488.t1 AT4G25980 30.195 308 190 6 42 331 26 326 1.69e-45 158
MS.gene80488.t1 AT2G35380 36.694 248 136 7 101 331 4 247 2.39e-44 153
MS.gene80488.t1 AT3G17070 36.260 262 150 6 84 331 18 276 1.28e-43 152
MS.gene80488.t1 AT5G39580 37.441 211 117 2 8 218 4 199 1.31e-39 140
MS.gene80488.t1 AT2G24800 41.379 174 93 3 39 208 28 196 1.23e-35 130
MS.gene80488.t1 AT4G25980 34.524 168 107 2 42 208 71 236 5.23e-31 119
MS.gene80488.t1 AT4G08390 28.462 260 146 11 74 315 124 361 1.67e-12 68.2
MS.gene80488.t1 AT4G08390 28.462 260 146 11 74 315 125 362 1.90e-12 68.2
MS.gene80488.t1 AT4G08390 28.462 260 146 11 74 315 125 362 1.90e-12 68.2
MS.gene80488.t1 AT4G08390 28.462 260 146 11 74 315 125 362 1.90e-12 68.2
MS.gene80488.t1 AT3G42570 33.333 108 68 2 101 206 44 149 9.23e-11 60.1

Find 77 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCCTTCCACACTCTTTA+TGG 0.066029 6.3:+37325625 None:intergenic
CATCTGTGACATCAAAGTTT+TGG 0.266237 6.3:+37322632 None:intergenic
CTTCCATGATTGCTTTGTTC+AGG 0.273834 6.3:-37326299 MS.gene80488:intron
TTGTCCATTGTAGGGTCTGC+TGG 0.277250 6.3:+37322541 None:intergenic
ACAGATGTTGTTGCATTATC+AGG 0.305416 6.3:-37322616 MS.gene80488:CDS
TGAAAACCATTGATGACATT+AGG 0.315664 6.3:-37325656 MS.gene80488:CDS
TTCAAGGTTGGGACATGTTT+GGG 0.319115 6.3:+37326396 None:intergenic
GGCATTGGTTTGTGCCTTAG+AGG 0.329040 6.3:+37326456 None:intergenic
CCTAGTGGTACTGGAAAATT+AGG 0.331632 6.3:+37322748 None:intergenic
GGTGAGTCAGTTGAATGTTT+TGG 0.336957 6.3:-37322278 MS.gene80488:CDS
GCTAAATGTAATGTGGTAAA+TGG 0.345255 6.3:-37322232 MS.gene80488:CDS
TTCATACTTCCATGCCTCTA+AGG 0.346674 6.3:-37326470 MS.gene80488:CDS
GAAAACCATTGATGACATTA+GGG 0.352381 6.3:-37325655 MS.gene80488:CDS
GTGTTGCCTGAATTTGCATT+AGG 0.360923 6.3:+37322487 None:intergenic
GGTGGTTGATCTCTTTCTCC+TGG 0.361258 6.3:+37325705 None:intergenic
TCTGTTCTCATGCCTCCATT+TGG 0.376449 6.3:+37325684 None:intergenic
TATTTGTTGTCGAATGTTGC+CGG 0.379179 6.3:+37322442 None:intergenic
TTTCAAGGTTGGGACATGTT+TGG 0.387676 6.3:+37326395 None:intergenic
TTTCACTACTGGTGGGGCAT+TGG 0.400421 6.3:+37326441 None:intergenic
TGTTGCCTGAATTTGCATTA+GGG 0.401527 6.3:+37322488 None:intergenic
TGTCCATTGTAGGGTCTGCT+GGG 0.409545 6.3:+37322542 None:intergenic
TTATCAGGTGCACACACATT+TGG 0.411956 6.3:-37322601 MS.gene80488:CDS
TCGAATCAATGTTCAAATCT+TGG 0.411957 6.3:+37322377 None:intergenic
TCTCTTCTTCCTAGTGGTAC+TGG 0.420647 6.3:+37322739 None:intergenic
TGATTCGAGGACGAAGGGTT+TGG 0.427643 6.3:-37322362 MS.gene80488:CDS
ACACTGCAAACCTAGACATT+AGG 0.442026 6.3:-37322468 MS.gene80488:CDS
TGTTTGGGTAAAGAAATTAT+AGG 0.444514 6.3:+37326411 None:intergenic
CTTGTTTGTTCATCAAATCA+AGG 0.451076 6.3:+37322416 None:intergenic
TATAGAATTTACTAGGAAAA+CGG 0.458478 6.3:+37325563 None:intergenic
GTTCTCATGCCTCCATTTGG+TGG 0.462989 6.3:+37325687 None:intergenic
TAGGACAACCCTTTCACTAC+TGG 0.470644 6.3:+37326430 None:intergenic
TTACCTGAACAAAGCAATCA+TGG 0.472303 6.3:+37326296 None:intergenic
AGCAATCATGGAAGAAAATA+CGG 0.473199 6.3:+37326308 None:intergenic
TTGTGCAGACATCACTGTCT+TGG 0.473769 6.3:-37325598 MS.gene80488:CDS
GTGCTACTGGATGGAAGTCC+AGG 0.474173 6.3:-37325723 MS.gene80488:CDS
ATTTGTTGTCGAATGTTGCC+GGG 0.478530 6.3:+37322443 None:intergenic
ACTTGCCCTAATGCAAATTC+AGG 0.479618 6.3:-37322493 MS.gene80488:CDS
TCAGACAATGGTCAAGCTCC+TGG 0.485320 6.3:-37326337 MS.gene80488:CDS
CAAAGAGTAGAAAGAAGTGA+TGG 0.486453 6.3:+37326519 None:intergenic
AAGATTTGAACATTGATTCG+AGG 0.488414 6.3:-37322375 MS.gene80488:CDS
TTTGTCTACTTTGGTGGAAG+AGG 0.489747 6.3:-37322194 MS.gene80488:CDS
TACTTTGGTGGAAGAGGGAA+TGG 0.490108 6.3:-37322188 MS.gene80488:CDS
GAAGTATGAAGCAAATAGAA+TGG 0.492688 6.3:+37326483 None:intergenic
ATGTGATGGATCAGTGCTAC+TGG 0.506122 6.3:-37325736 MS.gene80488:CDS
GAAAGAGATCAACCACCAAA+TGG 0.506240 6.3:-37325699 MS.gene80488:CDS
TTGCCGGGGTCCTAATGTCT+AGG 0.508256 6.3:+37322458 None:intergenic
TTTCCATCTCTTCTTCCTAG+TGG 0.525851 6.3:+37322733 None:intergenic
TGGTTTGTGCCTTAGAGGCA+TGG 0.526746 6.3:+37326461 None:intergenic
GCAGACATCACTGTCTTGGC+TGG 0.528321 6.3:-37325594 MS.gene80488:CDS
TTGTCTACTTTGGTGGAAGA+GGG 0.530208 6.3:-37322193 MS.gene80488:CDS
AAGAGCCCTAATGTCATCAA+TGG 0.538416 6.3:+37325650 None:intergenic
AACATTGATTCGAGGACGAA+GGG 0.541013 6.3:-37322367 MS.gene80488:CDS
ATTGTCTGATTTGAAAACCT+TGG 0.548894 6.3:+37326351 None:intergenic
ATTTGAAAACCTTGGTGAGA+TGG 0.550243 6.3:+37326359 None:intergenic
GACAACCCTTTCACTACTGG+TGG 0.551774 6.3:+37326433 None:intergenic
ATCAATGTTCAAATCTTGGT+CGG 0.557525 6.3:+37322381 None:intergenic
ATGCCCCACCAGTAGTGAAA+GGG 0.569803 6.3:-37326438 MS.gene80488:CDS
ATATGTATGTAGGGATGTGA+TGG 0.571667 6.3:-37325750 MS.gene80488:intron
GTCCATTGTAGGGTCTGCTG+GGG 0.578136 6.3:+37322543 None:intergenic
CTTGATTTGATGAACAAACA+AGG 0.578618 6.3:-37322415 MS.gene80488:CDS
AAGAAAATACGGAGTAAACC+AGG 0.582511 6.3:+37326319 None:intergenic
AATGCCCCACCAGTAGTGAA+AGG 0.587304 6.3:-37326439 MS.gene80488:CDS
TTGTCCATAAAGAGTGTGGA+AGG 0.591374 6.3:-37325629 MS.gene80488:CDS
ACATTTGGTCGTGCACATTG+TGG 0.592460 6.3:-37322586 MS.gene80488:CDS
GAACATTGATTCGAGGACGA+AGG 0.596578 6.3:-37322368 MS.gene80488:CDS
GTACCACTAGGAAGAAGAGA+TGG 0.602871 6.3:-37322736 MS.gene80488:CDS
CAACCCTTTCACTACTGGTG+GGG 0.602899 6.3:+37326435 None:intergenic
ACAACCCTTTCACTACTGGT+GGG 0.603386 6.3:+37326434 None:intergenic
AATTCGTGCTAAATGTAATG+TGG 0.624176 6.3:-37322239 MS.gene80488:CDS
CTCCCCAGCAGACCCTACAA+TGG 0.624743 6.3:-37322545 MS.gene80488:CDS
GCTCTTGTCCATAAAGAGTG+TGG 0.630917 6.3:-37325633 MS.gene80488:CDS
GATGGATCAGTGCTACTGGA+TGG 0.647755 6.3:-37325732 MS.gene80488:CDS
AGAGATCAACCACCAAATGG+AGG 0.657924 6.3:-37325696 MS.gene80488:CDS
AAATGTAATGTGGTAAATGG+TGG 0.658711 6.3:-37322229 MS.gene80488:CDS
TTTGTTGTCGAATGTTGCCG+GGG 0.666395 6.3:+37322444 None:intergenic
AAACCTAGACATTAGGACCC+CGG 0.678367 6.3:-37322461 MS.gene80488:CDS
TGTTAGAAACCATCTCACCA+AGG 0.690540 6.3:-37326368 MS.gene80488:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATCAATATAAAATG+AGG - chr6.3:37322635-37322654 MS.gene80488:CDS 10.0%
!! AAACAGAAAAATATATAAAA+TGG - chr6.3:37324458-37324477 MS.gene80488:intron 10.0%
!! AATATCAGAATAATATTAAA+CGG + chr6.3:37325824-37325843 None:intergenic 10.0%
!! GATATAAAATAAAAGTAAAA+TGG + chr6.3:37323171-37323190 None:intergenic 10.0%
!! TAAGATTATAGATTTAAATA+TGG - chr6.3:37323851-37323870 MS.gene80488:intron 10.0%
!!! AAATAATATTGTAATCATTT+TGG + chr6.3:37324316-37324335 None:intergenic 10.0%
!!! TAATAATACTTTAAAGTTTA+AGG + chr6.3:37325019-37325038 None:intergenic 10.0%
!!! TAGTATATAATTTTTGTATA+GGG - chr6.3:37323432-37323451 MS.gene80488:intron 10.0%
!!! TAGTTTATATTTTTTTTCAA+AGG - chr6.3:37323570-37323589 MS.gene80488:intron 10.0%
!!! TATATTTTTCTAATAATACA+AGG + chr6.3:37325330-37325349 None:intergenic 10.0%
!!! TATGTAAAATATTTTTATTC+AGG - chr6.3:37322823-37322842 MS.gene80488:intron 10.0%
!!! TATTTTATATCTTTTTTTCT+TGG - chr6.3:37323180-37323199 MS.gene80488:intron 10.0%
!!! TTATTAATGATATTTGTTAT+AGG + chr6.3:37322852-37322871 None:intergenic 10.0%
!! CAAAAAAAAAAATGATTAGT+AGG + chr6.3:37323221-37323240 None:intergenic 15.0%
!! TTTAAATATGCTTTATCAAA+AGG - chr6.3:37325072-37325091 MS.gene80488:intron 15.0%
!!! AGAATATAAAAAGTTTTGTT+AGG + chr6.3:37322906-37322925 None:intergenic 15.0%
!!! ATATTGATAATTTTTTCCTA+TGG + chr6.3:37322629-37322648 None:intergenic 15.0%
!!! ATCTATATTAAAACCTATTT+TGG - chr6.3:37322686-37322705 MS.gene80488:CDS 15.0%
!!! CTATGAAAAATTTCTAATTT+TGG - chr6.3:37323981-37324000 MS.gene80488:intron 15.0%
!!! GCTTTTGATTATTATTTTTT+GGG + chr6.3:37325570-37325589 None:intergenic 15.0%
!!! GTAGTATATAATTTTTGTAT+AGG - chr6.3:37323431-37323450 MS.gene80488:intron 15.0%
!!! GTTTATTAATGCTTTTATTA+AGG - chr6.3:37326407-37326426 MS.gene80488:CDS 15.0%
!!! TGCTTTTGATTATTATTTTT+TGG + chr6.3:37325571-37325590 None:intergenic 15.0%
!!! TTATTTCTAAAATAGATCAA+TGG - chr6.3:37323469-37323488 MS.gene80488:intron 15.0%
!! AAATATCTCGATTAATATGT+GGG + chr6.3:37324156-37324175 None:intergenic 20.0%
!! AATGGAATATAGAATTTACT+AGG + chr6.3:37323153-37323172 None:intergenic 20.0%
!! ACAAGTTTGTATGTAATAAT+AGG + chr6.3:37322877-37322896 None:intergenic 20.0%
!! AGTGGGTATTAATATTTAAA+GGG + chr6.3:37324046-37324065 None:intergenic 20.0%
!! CTTGATTAAATATGTATCAA+CGG + chr6.3:37323806-37323825 None:intergenic 20.0%
!! TAAATATCTCGATTAATATG+TGG + chr6.3:37324157-37324176 None:intergenic 20.0%
!! TAATCTAATGAAATTCGTAT+GGG + chr6.3:37322777-37322796 None:intergenic 20.0%
!! TATAGAATTTACTAGGAAAA+CGG + chr6.3:37323146-37323165 None:intergenic 20.0%
!!! AAGTATTAGAGACAAAATTT+TGG + chr6.3:37323340-37323359 None:intergenic 20.0%
!!! AATAGTTGATATATGTATGT+AGG - chr6.3:37322946-37322965 MS.gene80488:intron 20.0%
!!! ATAGTTGATATATGTATGTA+GGG - chr6.3:37322947-37322966 MS.gene80488:intron 20.0%
!!! ATATTAAAACCTATTTTGGT+TGG - chr6.3:37322690-37322709 MS.gene80488:CDS 20.0%
!!! GTAAGTTATTTAAAATGAGA+CGG - chr6.3:37325387-37325406 MS.gene80488:intron 20.0%
!!! TAAGTTATTTAAAATGAGAC+GGG - chr6.3:37325388-37325407 MS.gene80488:intron 20.0%
!!! TAGTGGGTATTAATATTTAA+AGG + chr6.3:37324047-37324066 None:intergenic 20.0%
!!! TATTTTTTTTCAAAGGAAAC+AGG - chr6.3:37323577-37323596 MS.gene80488:intron 20.0%
!!! TCATAAATTTTTTGAATGAC+TGG + chr6.3:37324765-37324784 None:intergenic 20.0%
!!! TCCTTTTAAAATATTTTACG+CGG - chr6.3:37324737-37324756 MS.gene80488:intron 20.0%
!!! TTTTCTCATATTCTCATTTT+CGG + chr6.3:37324277-37324296 None:intergenic 20.0%
! AATCTAATGAAATTCGTATG+GGG + chr6.3:37322776-37322795 None:intergenic 25.0%
! AATGTTTAATGTGACAACAA+AGG + chr6.3:37323626-37323645 None:intergenic 25.0%
! ACAACGAAAAAAAGTGAAAT+TGG - chr6.3:37323311-37323330 MS.gene80488:intron 25.0%
! ATCAGAATAATATTAAACGG+AGG + chr6.3:37325821-37325840 None:intergenic 25.0%
! ATTCATTGACATACATGATA+TGG + chr6.3:37325175-37325194 None:intergenic 25.0%
! CTAATCTAATGAAATTCGTA+TGG + chr6.3:37322778-37322797 None:intergenic 25.0%
! TCCGAATCTCAAAATATATT+CGG - chr6.3:37322578-37322597 MS.gene80488:CDS 25.0%
! TGTTTGGGTAAAGAAATTAT+AGG + chr6.3:37322298-37322317 None:intergenic 25.0%
! TTGTGTCATGTATTATAAGA+CGG + chr6.3:37325148-37325167 None:intergenic 25.0%
!! AAGTTATTTAAAATGAGACG+GGG - chr6.3:37325389-37325408 MS.gene80488:intron 25.0%
!! CAGCTTTAATAAAAGAGATA+TGG - chr6.3:37325432-37325451 MS.gene80488:intron 25.0%
!! CTCTTTTCATTATTTCAATC+TGG - chr6.3:37323404-37323423 MS.gene80488:intron 25.0%
!! CTTCAGAAATTGATTCTTTA+TGG + chr6.3:37324340-37324359 None:intergenic 25.0%
!!! ACCGAATATATTTTGAGATT+CGG + chr6.3:37322582-37322601 None:intergenic 25.0%
!!! ATGGCTTTAAAATAGATTTC+AGG - chr6.3:37323488-37323507 MS.gene80488:intron 25.0%
AAATGTAATGTGGTAAATGG+TGG - chr6.3:37326477-37326496 MS.gene80488:CDS 30.0%
AACATAAAATGTTAGTCCCA+TGG - chr6.3:37324499-37324518 MS.gene80488:intron 30.0%
AATAATTGTTCGTCATACCA+TGG + chr6.3:37324519-37324538 None:intergenic 30.0%
AATTCGTGCTAAATGTAATG+TGG - chr6.3:37326467-37326486 MS.gene80488:CDS 30.0%
ACATCAGAAACATGATTAGT+AGG + chr6.3:37323255-37323274 None:intergenic 30.0%
AGCAATCATGGAAGAAAATA+CGG + chr6.3:37322401-37322420 None:intergenic 30.0%
ATAATTGTTCGTCATACCAT+GGG + chr6.3:37324518-37324537 None:intergenic 30.0%
ATATAAAAGCCTTCTTGTAC+TGG - chr6.3:37325590-37325609 MS.gene80488:CDS 30.0%
ATCAATGTTCAAATCTTGGT+CGG + chr6.3:37326328-37326347 None:intergenic 30.0%
ATCTCAATAGTCAGTATTGT+GGG - chr6.3:37325754-37325773 MS.gene80488:intron 30.0%
CTTGTTTGTTCATCAAATCA+AGG + chr6.3:37326293-37326312 None:intergenic 30.0%
GAAGTATGAAGCAAATAGAA+TGG + chr6.3:37322226-37322245 None:intergenic 30.0%
GACTGTAGAATGAAAAATCA+AGG + chr6.3:37325931-37325950 None:intergenic 30.0%
GAGTTGTCAAACAAAAGAAA+AGG + chr6.3:37324979-37324998 None:intergenic 30.0%
GCTAAATGTAATGTGGTAAA+TGG - chr6.3:37326474-37326493 MS.gene80488:CDS 30.0%
TAGAAAGTCATGTGAAGTTA+TGG - chr6.3:37323539-37323558 MS.gene80488:intron 30.0%
TATAGCATATGAGATGTTGT+TGG + chr6.3:37325301-37325320 None:intergenic 30.0%
TATCTCAATAGTCAGTATTG+TGG - chr6.3:37325753-37325772 MS.gene80488:intron 30.0%
TCGAATCAATGTTCAAATCT+TGG + chr6.3:37326332-37326351 None:intergenic 30.0%
TCTCACAGCACATAATTATT+AGG - chr6.3:37324808-37324827 MS.gene80488:intron 30.0%
TCTTACAAGTAAAACTCACT+TGG + chr6.3:37323836-37323855 None:intergenic 30.0%
TGATACCATCTTAAAAATCG+TGG + chr6.3:37325795-37325814 None:intergenic 30.0%
TGGTATGACGAACAATTATT+TGG - chr6.3:37324519-37324538 MS.gene80488:intron 30.0%
! AAGAATCAATTTCTGAAGAC+TGG - chr6.3:37324342-37324361 MS.gene80488:intron 30.0%
! AAGGTTTTCAAATCAGACAA+TGG - chr6.3:37322357-37322376 MS.gene80488:CDS 30.0%
! AATGTCATCAATGGTTTTCA+AGG + chr6.3:37323050-37323069 None:intergenic 30.0%
! AGTTATTTAAAATGAGACGG+GGG - chr6.3:37325390-37325409 MS.gene80488:intron 30.0%
! ATCTGTGACATCAAAGTTTT+GGG + chr6.3:37326076-37326095 None:intergenic 30.0%
! ATTGTCTGATTTGAAAACCT+TGG + chr6.3:37322358-37322377 None:intergenic 30.0%
! CAATACTGACTATTGAGATA+AGG + chr6.3:37325753-37325772 None:intergenic 30.0%
! CTTGATTTGATGAACAAACA+AGG - chr6.3:37326291-37326310 MS.gene80488:intron 30.0%
! GAAAACCATTGATGACATTA+GGG - chr6.3:37323051-37323070 MS.gene80488:intron 30.0%
! GAAATCTGTTTTGTCTACTT+TGG - chr6.3:37326503-37326522 MS.gene80488:CDS 30.0%
! GGTTTCTAACAATGTTTTCA+AGG + chr6.3:37322329-37322348 None:intergenic 30.0%
! TGAAAACCATTGATGACATT+AGG - chr6.3:37323050-37323069 MS.gene80488:intron 30.0%
! TGATTTTTCATTCTACAGTC+AGG - chr6.3:37325931-37325950 MS.gene80488:intron 30.0%
!! AAGATTTGAACATTGATTCG+AGG - chr6.3:37326331-37326350 MS.gene80488:CDS 30.0%
!! CTAACAATGTTTTCAAGGTT+GGG + chr6.3:37322324-37322343 None:intergenic 30.0%
!! GCCGCGTAAAATATTTTAAA+AGG + chr6.3:37324741-37324760 None:intergenic 30.0%
!! GTAACATCTGTTTTGTTGAA+TGG + chr6.3:37326036-37326055 None:intergenic 30.0%
!! TCTAACAATGTTTTCAAGGT+TGG + chr6.3:37322325-37322344 None:intergenic 30.0%
!! TGGATGTCTAAAATCGATTT+TGG - chr6.3:37325636-37325655 MS.gene80488:CDS 30.0%
!! TTGAGCATCGATTAAATATG+TGG + chr6.3:37324563-37324582 None:intergenic 30.0%
!!! GTTTTTAAGGTTTTGAGCTA+GGG + chr6.3:37326193-37326212 None:intergenic 30.0%
!!! TGTTTTTAAGGTTTTGAGCT+AGG + chr6.3:37326194-37326213 None:intergenic 30.0%
AAAGTTGCAAGATTGAACTG+TGG - chr6.3:37325669-37325688 MS.gene80488:CDS 35.0%
AACCTAAGTCTTTGATCAAG+TGG + chr6.3:37324834-37324853 None:intergenic 35.0%
AAGAAAATACGGAGTAAACC+AGG + chr6.3:37322390-37322409 None:intergenic 35.0%
AATGTTAACATGTGCCCTAA+GGG - chr6.3:37323876-37323895 MS.gene80488:intron 35.0%
ACAGATGTTGTTGCATTATC+AGG - chr6.3:37326090-37326109 MS.gene80488:intron 35.0%
ACCACTAAACCAACCAAAAT+AGG + chr6.3:37322702-37322721 None:intergenic 35.0%
AGAAGCCTACAATAATGCAA+AGG - chr6.3:37324878-37324897 MS.gene80488:intron 35.0%
ATATGTATGTAGGGATGTGA+TGG - chr6.3:37322956-37322975 MS.gene80488:intron 35.0%
ATTTGAAAACCTTGGTGAGA+TGG + chr6.3:37322350-37322369 None:intergenic 35.0%
CAAAGAGTAGAAAGAAGTGA+TGG + chr6.3:37322190-37322209 None:intergenic 35.0%
CTCAAAATATATTCGGTCCA+AGG - chr6.3:37322585-37322604 MS.gene80488:CDS 35.0%
GATCAGTAGGTGAAAATTAC+AGG - chr6.3:37324082-37324101 MS.gene80488:intron 35.0%
GTCATGTATTATAAGACGGA+GGG + chr6.3:37325144-37325163 None:intergenic 35.0%
TCTCAATAGTCAGTATTGTG+GGG - chr6.3:37325755-37325774 MS.gene80488:intron 35.0%
TGTCATGTATTATAAGACGG+AGG + chr6.3:37325145-37325164 None:intergenic 35.0%
TGTTGCCTGAATTTGCATTA+GGG + chr6.3:37326221-37326240 None:intergenic 35.0%
TTACCTGAACAAAGCAATCA+TGG + chr6.3:37322413-37322432 None:intergenic 35.0%
TTGAGCCTTTGCATTATTGT+AGG + chr6.3:37324886-37324905 None:intergenic 35.0%
TTTCTGTTTGCATTGGACTT+TGG - chr6.3:37325616-37325635 MS.gene80488:CDS 35.0%
! AATCAATTTCTGAAGACTGG+TGG - chr6.3:37324345-37324364 MS.gene80488:intron 35.0%
! ATCTGTTTTGTCTACTTTGG+TGG - chr6.3:37326506-37326525 MS.gene80488:CDS 35.0%
! CAGTTCAATCTTGCAACTTT+TGG + chr6.3:37325669-37325688 None:intergenic 35.0%
! CATCTGTGACATCAAAGTTT+TGG + chr6.3:37326077-37326096 None:intergenic 35.0%
! TTGTTGGCATGCTTTTGATA+AGG + chr6.3:37325285-37325304 None:intergenic 35.0%
! TTTTTCATTCTACAGTCAGG+AGG - chr6.3:37325934-37325953 MS.gene80488:intron 35.0%
!! ACTTTTAAGTCTTGCAACGT+GGG + chr6.3:37324910-37324929 None:intergenic 35.0%
!! CATTAGGGCAAGTGTTTTTA+AGG + chr6.3:37326206-37326225 None:intergenic 35.0%
!! GTCAACCACGATTTTTAAGA+TGG - chr6.3:37325787-37325806 MS.gene80488:intron 35.0%
!! GTGGTGCTAGCTTAAAATTT+TGG - chr6.3:37322717-37322736 MS.gene80488:CDS 35.0%
!! TACTTTTAAGTCTTGCAACG+TGG + chr6.3:37324911-37324930 None:intergenic 35.0%
!! TATTTGTTGTCGAATGTTGC+CGG + chr6.3:37326267-37326286 None:intergenic 35.0%
!! TCTGTTTTGTTGAATGGTTG+TGG + chr6.3:37326030-37326049 None:intergenic 35.0%
!!! AATGTTTTGGTCGGAAATCA+AGG - chr6.3:37326441-37326460 MS.gene80488:CDS 35.0%
!!! ACCTATTTTGGTTGGTTTAG+TGG - chr6.3:37322698-37322717 MS.gene80488:CDS 35.0%
!!! AGTCAGTTGAATGTTTTGGT+CGG - chr6.3:37326432-37326451 MS.gene80488:CDS 35.0%
AAGAGCCCTAATGTCATCAA+TGG + chr6.3:37323059-37323078 None:intergenic 40.0%
ACACTGCAAACCTAGACATT+AGG - chr6.3:37326238-37326257 MS.gene80488:intron 40.0%
ACTTGCCCTAATGCAAATTC+AGG - chr6.3:37326213-37326232 MS.gene80488:intron 40.0%
ATTCCCTAACATATGCCCTT+AGG + chr6.3:37323894-37323913 None:intergenic 40.0%
CAATCCTTCCACACTCTTTA+TGG + chr6.3:37323084-37323103 None:intergenic 40.0%
CAATGTTAACATGTGCCCTA+AGG - chr6.3:37323875-37323894 MS.gene80488:intron 40.0%
CAGAAAAGTCCAGTACAAGA+AGG + chr6.3:37325602-37325621 None:intergenic 40.0%
CTTCTAGCAAGACTTTGGTT+GGG + chr6.3:37324863-37324882 None:intergenic 40.0%
GAAAGAGATCAACCACCAAA+TGG - chr6.3:37323007-37323026 MS.gene80488:intron 40.0%
GTGTTGCCTGAATTTGCATT+AGG + chr6.3:37326222-37326241 None:intergenic 40.0%
TGTTAGAAACCATCTCACCA+AGG - chr6.3:37322338-37322357 MS.gene80488:CDS 40.0%
TTATCAGGTGCACACACATT+TGG - chr6.3:37326105-37326124 MS.gene80488:intron 40.0%
TTCAAGGTTGGGACATGTTT+GGG + chr6.3:37322313-37322332 None:intergenic 40.0%
TTCACCTACTGATCAGTTGT+CGG + chr6.3:37324076-37324095 None:intergenic 40.0%
TTCATACTTCCATGCCTCTA+AGG - chr6.3:37322236-37322255 MS.gene80488:CDS 40.0%
TTCCCTAACATATGCCCTTA+GGG + chr6.3:37323893-37323912 None:intergenic 40.0%
TTGTCTACTTTGGTGGAAGA+GGG - chr6.3:37326513-37326532 MS.gene80488:CDS 40.0%
TTTCAAGGTTGGGACATGTT+TGG + chr6.3:37322314-37322333 None:intergenic 40.0%
TTTCCATCTCTTCTTCCTAG+TGG + chr6.3:37325976-37325995 None:intergenic 40.0%
TTTGTCTACTTTGGTGGAAG+AGG - chr6.3:37326512-37326531 MS.gene80488:CDS 40.0%
! CCTAATTTTCCAGTACCACT+AGG - chr6.3:37325958-37325977 MS.gene80488:intron 40.0%
! CCTAGTGGTACTGGAAAATT+AGG + chr6.3:37325961-37325980 None:intergenic 40.0%
! CTGGACTTTTCTGTTTGCAT+TGG - chr6.3:37325609-37325628 MS.gene80488:CDS 40.0%
! CTTCCATGATTGCTTTGTTC+AGG - chr6.3:37322407-37322426 MS.gene80488:CDS 40.0%
! CTTGTTATCTTGTGCCCTTA+GGG + chr6.3:37324022-37324041 None:intergenic 40.0%
! GGTGAGTCAGTTGAATGTTT+TGG - chr6.3:37326428-37326447 MS.gene80488:CDS 40.0%
! TCTTGTTATCTTGTGCCCTT+AGG + chr6.3:37324023-37324042 None:intergenic 40.0%
! TTGTCCATAAAGAGTGTGGA+AGG - chr6.3:37323077-37323096 MS.gene80488:intron 40.0%
!! AACATTGATTCGAGGACGAA+GGG - chr6.3:37326339-37326358 MS.gene80488:CDS 40.0%
!! ATTCCTTAACTTGTGCCCTA+AGG - chr6.3:37324004-37324023 MS.gene80488:intron 40.0%
!! ATTTGTTGTCGAATGTTGCC+GGG + chr6.3:37326266-37326285 None:intergenic 40.0%
!! CTAGGGTTTTGTCCATTGTA+GGG + chr6.3:37326176-37326195 None:intergenic 40.0%
!! TCCAAGGTTTTATCCATGGT+GGG - chr6.3:37322601-37322620 MS.gene80488:CDS 40.0%
!! TTCCTTAACTTGTGCCCTAA+GGG - chr6.3:37324005-37324024 MS.gene80488:intron 40.0%
AAACCTAGACATTAGGACCC+CGG - chr6.3:37326245-37326264 MS.gene80488:intron 45.0%
ACAACCCTTTCACTACTGGT+GGG + chr6.3:37322275-37322294 None:intergenic 45.0%
ACATTTGGTCGTGCACATTG+TGG - chr6.3:37326120-37326139 MS.gene80488:intron 45.0%
AGAGATCAACCACCAAATGG+AGG - chr6.3:37323010-37323029 MS.gene80488:intron 45.0%
CAATCCGACAACTGATCAGT+AGG - chr6.3:37324069-37324088 MS.gene80488:intron 45.0%
CAGTTGTCGGATTGACTAGT+GGG + chr6.3:37324063-37324082 None:intergenic 45.0%
GCTCTTGTCCATAAAGAGTG+TGG - chr6.3:37323073-37323092 MS.gene80488:intron 45.0%
GCTTCTAGCAAGACTTTGGT+TGG + chr6.3:37324864-37324883 None:intergenic 45.0%
GGCCACTTGATCAAAGACTT+AGG - chr6.3:37324829-37324848 MS.gene80488:intron 45.0%
GTACCACTAGGAAGAAGAGA+TGG - chr6.3:37325970-37325989 MS.gene80488:intron 45.0%
GTAGGCTTCTAGCAAGACTT+TGG + chr6.3:37324868-37324887 None:intergenic 45.0%
TACTTTGGTGGAAGAGGGAA+TGG - chr6.3:37326518-37326537 MS.gene80488:CDS 45.0%
TAGGACAACCCTTTCACTAC+TGG + chr6.3:37322279-37322298 None:intergenic 45.0%
TCAAAGGAAACAGGAGACAG+TGG - chr6.3:37323586-37323605 MS.gene80488:intron 45.0%
TCAGTTGTCGGATTGACTAG+TGG + chr6.3:37324064-37324083 None:intergenic 45.0%
TCTCTTCTTCCTAGTGGTAC+TGG + chr6.3:37325970-37325989 None:intergenic 45.0%
TCTGTTCTCATGCCTCCATT+TGG + chr6.3:37323025-37323044 None:intergenic 45.0%
TTGTGCAGACATCACTGTCT+TGG - chr6.3:37323108-37323127 MS.gene80488:intron 45.0%
! TGCCCTAAGGGCATATGTTA+GGG - chr6.3:37323888-37323907 MS.gene80488:intron 45.0%
! TTTGTTGTCGAATGTTGCCG+GGG + chr6.3:37326265-37326284 None:intergenic 45.0%
!! ATGTGATGGATCAGTGCTAC+TGG - chr6.3:37322970-37322989 MS.gene80488:intron 45.0%
!! CCAAGGTTTTATCCATGGTG+GGG - chr6.3:37322602-37322621 MS.gene80488:CDS 45.0%
!! GAACATTGATTCGAGGACGA+AGG - chr6.3:37326338-37326357 MS.gene80488:CDS 45.0%
!! GCTAGGGTTTTGTCCATTGT+AGG + chr6.3:37326177-37326196 None:intergenic 45.0%
!! GTCCAAGGTTTTATCCATGG+TGG - chr6.3:37322600-37322619 MS.gene80488:CDS 45.0%
!! TCGGTCCAAGGTTTTATCCA+TGG - chr6.3:37322597-37322616 MS.gene80488:CDS 45.0%
!!! AAAAAATATAATAATTTTAG+AGG - chr6.3:37324697-37324716 MS.gene80488:intron 5.0%
!!! ATTAAAATGAATAATTTTTT+TGG + chr6.3:37323692-37323711 None:intergenic 5.0%
!!! TTAAAATGAATAATTTTTTT+GGG + chr6.3:37323691-37323710 None:intergenic 5.0%
!!! TTTAAAATATTGTTATAAAA+TGG + chr6.3:37324185-37324204 None:intergenic 5.0%
AATGCCCCACCAGTAGTGAA+AGG - chr6.3:37322267-37322286 MS.gene80488:CDS 50.0%
ATGCCCCACCAGTAGTGAAA+GGG - chr6.3:37322268-37322287 MS.gene80488:CDS 50.0%
CAACCCTTTCACTACTGGTG+GGG + chr6.3:37322274-37322293 None:intergenic 50.0%
CCCCACCATGGATAAAACCT+TGG + chr6.3:37322605-37322624 None:intergenic 50.0%
GACAACCCTTTCACTACTGG+TGG + chr6.3:37322276-37322295 None:intergenic 50.0%
GGTGGTTGATCTCTTTCTCC+TGG + chr6.3:37323004-37323023 None:intergenic 50.0%
GTTCTCATGCCTCCATTTGG+TGG + chr6.3:37323022-37323041 None:intergenic 50.0%
TCAGACAATGGTCAAGCTCC+TGG - chr6.3:37322369-37322388 MS.gene80488:CDS 50.0%
TGATTCGAGGACGAAGGGTT+TGG - chr6.3:37326344-37326363 MS.gene80488:CDS 50.0%
TGCCCTTAGGGCACAAGTTA+AGG + chr6.3:37324010-37324029 None:intergenic 50.0%
TTTCACTACTGGTGGGGCAT+TGG + chr6.3:37322268-37322287 None:intergenic 50.0%
! GATGGATCAGTGCTACTGGA+TGG - chr6.3:37322974-37322993 MS.gene80488:intron 50.0%
! GTGCCCTAAGGGCATATGTT+AGG - chr6.3:37323887-37323906 MS.gene80488:intron 50.0%
! TGGTTTGTGCCTTAGAGGCA+TGG + chr6.3:37322248-37322267 None:intergenic 50.0%
! TTATCCATGGTGGGGTCCAT+AGG - chr6.3:37322610-37322629 MS.gene80488:CDS 50.0%
! TTTTCCTATGGACCCCACCA+TGG + chr6.3:37322617-37322636 None:intergenic 50.0%
!! GGCATTGGTTTGTGCCTTAG+AGG + chr6.3:37322253-37322272 None:intergenic 50.0%
GCAGACATCACTGTCTTGGC+TGG - chr6.3:37323112-37323131 MS.gene80488:intron 55.0%
TTGCCGGGGTCCTAATGTCT+AGG + chr6.3:37326251-37326270 None:intergenic 55.0%
! GTGCTACTGGATGGAAGTCC+AGG - chr6.3:37322983-37323002 MS.gene80488:intron 55.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 37322168 37326560 37322168 ID=MS.gene80488
chr6.3 mRNA 37322168 37326560 37322168 ID=MS.gene80488.t1;Parent=MS.gene80488
chr6.3 exon 37326300 37326560 37326300 ID=MS.gene80488.t1.exon1;Parent=MS.gene80488.t1
chr6.3 CDS 37326300 37326560 37326300 ID=cds.MS.gene80488.t1;Parent=MS.gene80488.t1
chr6.3 exon 37325575 37325760 37325575 ID=MS.gene80488.t1.exon2;Parent=MS.gene80488.t1
chr6.3 CDS 37325575 37325760 37325575 ID=cds.MS.gene80488.t1;Parent=MS.gene80488.t1
chr6.3 exon 37322168 37322779 37322168 ID=MS.gene80488.t1.exon3;Parent=MS.gene80488.t1
chr6.3 CDS 37322168 37322779 37322168 ID=cds.MS.gene80488.t1;Parent=MS.gene80488.t1
Gene Sequence

>MS.gene80488

ATGGCTAAGAATAGTGTTTCCATCACTTCTTTCTACTCTTTGCTTTTGATATCTTCCATTCTATTTGCTTCATACTTCCATGCCTCTAAGGCACAAACCAATGCCCCACCAGTAGTGAAAGGGTTGTCCTATAATTTCTTTACCCAAACATGTCCCAACCTTGAAAACATTGTTAGAAACCATCTCACCAAGGTTTTCAAATCAGACAATGGTCAAGCTCCTGGTTTACTCCGTATTTTCTTCCATGATTGCTTTGTTCAGGTAATATATGTCAGTTGTTATTCATGCAAAAAATATTATTTACTATTTTGAGCTATATATATTAATACTAAATTGAAGAATAACAAAGAATGAATTGAGATTGAGTTTAGAAGAAGAGACTAGACTTATATAACATGACGAAACAATTGTCCGAATCTCAAAATATATTCGGTCCAAGGTTTTATCCATGGTGGGGTCCATAGGAAAAAATTATCAATATAAAATGAGGATCATGAAAAATATTTGACATTAATTGTATCTATATTAAAACCTATTTTGGTTGGTTTAGTGGTGCTAGCTTAAAATTTTGGAGTGTGCTTTTCTCTAGTTCTTAGTTTTGATTTCCCCATACGAATTTCATTAGATTAGCAATAATGATTTGTGATCGATTGACTATGTAAAATATTTTTATTCAGGATGCCTATAACAAATATCATTAATAACTCCTATTATTACATACAAACTTGTAATTTTCCTAACAAAACTTTTTATATTCTCAAGTTTTCTTGCATAACTGAATAGTTGATATATGTATGTAGGGATGTGATGGATCAGTGCTACTGGATGGAAGTCCAGGAGAAAGAGATCAACCACCAAATGGAGGCATGAGAACAGAAGCCTTGAAAACCATTGATGACATTAGGGCTCTTGTCCATAAAGAGTGTGGAAGGATTGTTTCTTGTGCAGACATCACTGTCTTGGCTGGTCGTGAAGCCGTTTTCCTAGTAAATTCTATATTCCATTTTACTTTTATTTTATATCTTTTTTTCTTGGTACATAATTTTTTTTCCTACTAATCATTTTTTTTTTTGACAAATTTTTTCCTACTAATCATGTTTCTGATGTTTTGTACATATATTACTATTAGAAAAAATTGAAATAACAACGAAAAAAAGTGAAATTGGTCACCAAAATTTTGTCTCTAATACTTAGAAACGATATTTGTGACGAATTTTCTCTTTTTCAATAACTAAACTCTTTTCATTATTTCAATCTGGTCTAGTAGTATATAATTTTTGTATAGGGAGTGCATATATATGTTATTTCTAAAATAGATCAATGGCTTTAAAATAGATTTCAGGTTTGTGAAATAATTTCTTCAAGATAAAATAGAAAGTCATGTGAAGTTATGGTGAGAGTATAGTTTATATTTTTTTTCAAAGGAAACAGGAGACAGTGGTTTCATTTCATAGACCTTTGTTGTCACATTAAACATTTATTAACTATAAGTTTATTATAAAAATTATTAATATTGTGTACCCAAAAAAATTATTCATTTTAATAGTATGTAAACATCACTTGTCAAGAAAATAAAATATCACTACTAGTCACGACACACACATATATAAAATAGTTTCTTATGCATATATAGTACCGTTGATACATATTTAATCAAGATTGTGACCAAGTGAGTTTTACTTGTAAGATTATAGATTTAAATATGGTCAATGTTAACATGTGCCCTAAGGGCATATGTTAGGGAATTTAAAATAGAAATAATTCTCTTAAAAGTTGTGCATTCAACTTTTCAAAGTTAATTTTTTGTTCTTTTCTATGAAAAATTTCTAATTTTGGATTCCTTAACTTGTGCCCTAAGGGCACAAGATAACAAGACCCTTTAAATATTAATACCCACTAGTCAATCCGACAACTGATCAGTAGGTGAAAATTACAGGAATAGAAAGAAAAAAATACGCAGCTAATTAAAAAATTATTTTGATAGACCCACATATTAATCGAGATATTTATACAACCATTTTATAACAATATTTTAAACAACTTTCTTCATCTCGTTTATTATTTGTTAAAAACAATAGAGAGAGAAAACGACATAGAGAAAGTAAACCGAAAATGAGAATATGAGAAAAAAGTTGTTCAAATATACCAAAATGATTACAATATTATTTTCCATAAAGAATCAATTTCTGAAGACTGGTGGTACTAAAAAACATGAGTCTTATTTTATTACAAAACATTGACAAAGATTTTTTGACAAAATATTTCTCACAAAGTTAAATAATTGAGTTATAAACAGAAAAATATATAAAATGGAAACATAGAGTTGAGTCTAACATAAAATGTTAGTCCCATGGTATGACGAACAATTATTTGGATATTGATATTGAGTGATCCACATATTTAATCGATGCTCAACAATATTTTCAATTTATATTTAATCGATGCTCAACAATATTTTCAATTTAATTATCTCAAATGTATGCAAACTTAGAAAAGAAAAGCAAACAAAATATAATATTTTTTCTTTCAAAAAAATATAATAATTTTAGAGGAAAATATTTAGCAAAAATCCTTTTAAAATATTTTACGCGGCGCCAGTCATTCAAAAAATTTATGAGTATATAGATAAGTATATTCTTGTCTCACAGCACATAATTATTAGGCCACTTGATCAAAGACTTAGGTTTATTCTCCCAACCAAAGTCTTGCTAGAAGCCTACAATAATGCAAAGGCTCAAGCCCACGTTGCAAGACTTAAAAGTAAACTTTAATTATTATTTTTCAGACAATTGTTCTAACAACTTTTGACCTTTTCTTTTGTTTGACAACTCTTTTGTCATTTTCTAATCCTTAAACTTTAAAGTATTATTAACTTTTACATTATTCTACTCTTAGTTTTATTTTTTTAAATATGCTTTATCAAAAGGTTATTTTATATTGACTATGCTAGTACATCTTTTTTAGTATTATACTCCCTCCGTCTTATAATACATGACACAATTGACCATATCATGTATGTCAATGAATAATTTTGAGCTTAAATATCTTGAATAATATATTAGAAAAAAATATGAATTGATATTTTGAAAGTATTCGTTGAAAAATATAGTTTGTCCTTATCAAAAGCATGCCAACAACATCTCATATGCTATAATTTGTCCTTGTATTATTAGAAAAATATAGTCAAAGTATATTATGTGAATAGTGCACATTTTTAAAGTAAGTTATTTAAAATGAGACGGGGGAAGTAATTAGACTAGAAGACAGCTTTAATAAAAGAGATATGGATTGAGTTATTTTTGTTGATACATGAGAAAAATGATGTTAATCGTAGATAAAACATAATATAGAATCAAAAGCATCTTCTATCATAAAAATAAATTAATCAAAAGCACTTCTCCCAAAAAATAATAATCAAAAGCATATAAAAGCCTTCTTGTACTGGACTTTTCTGTTTGCATTGGACTTTGGATGTCTAAAATCGATTTTGGTATTATACCAAAAGTTGCAAGATTGAACTGTGGAAATAATCGTCGAGTAGTGTTTAAGAGTCTCACAGATGTGCTTATAAGTGTGAGCAATCCTTATCTCAATAGTCAGTATTGTGGGGTTGTGTTATGTCAACCACGATTTTTAAGATGGTATCAGAGCCTCCGTTTAATATTATTCTGATATTATTTGACATAGTGATAATTAAACATTTAAAGAAATAATATTTTGCTATGATCTTATACTTGATAGTAAAATTTTCATGTTGTAACCTTGATTTTTCATTCTACAGTCAGGAGGACCTAATTTTCCAGTACCACTAGGAAGAAGAGATGGAAAAACTTTTAGCATTAAAGAAACAAGCAATCTTCCACAACCATTCAACAAAACAGATGTTACACTCAAAGTTTTTGCAGCCCAAAACTTTGATGTCACAGATGTTGTTGCATTATCAGGTGCACACACATTTGGTCGTGCACATTGTGGAACATTCTTCAATAGACTCTCCCCAGCAGACCCTACAATGGACAAAACCCTAGCTCAAAACCTTAAAAACACTTGCCCTAATGCAAATTCAGGCAACACTGCAAACCTAGACATTAGGACCCCGGCAACATTCGACAACAAATACTACCTTGATTTGATGAACAAACAAGGTTTGTTTACTTCCGACCAAGATTTGAACATTGATTCGAGGACGAAGGGTTTGGTTAATGACTTTGCTGTTAATCAGAATTTGTTCTTTGAGAAGTTTATTAATGCTTTTATTAAGGTGAGTCAGTTGAATGTTTTGGTCGGAAATCAAGGAGAAATTCGTGCTAAATGTAATGTGGTAAATGGTGGTAAGAAATCTGTTTTGTCTACTTTGGTGGAAGAGGGAATGGACTTGATTGAGCAATTTTAA
Protein sequence

>MS.gene80488.t1

MAKNSVSITSFYSLLLISSILFASYFHASKAQTNAPPVVKGLSYNFFTQTCPNLENIVRNHLTKVFKSDNGQAPGLLRIFFHDCFVQGCDGSVLLDGSPGERDQPPNGGMRTEALKTIDDIRALVHKECGRIVSCADITVLAGREAVFLSGGPNFPVPLGRRDGKTFSIKETSNLPQPFNKTDVTLKVFAAQNFDVTDVVALSGAHTFGRAHCGTFFNRLSPADPTMDKTLAQNLKNTCPNANSGNTANLDIRTPATFDNKYYLDLMNKQGLFTSDQDLNIDSRTKGLVNDFAVNQNLFFEKFINAFIKVSQLNVLVGNQGEIRAKCNVVNGGKKSVLSTLVEEGMDLIEQF