Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81601.t1 | XP_003616932.3 | 99.7 | 298 | 1 | 0 | 1 | 298 | 15 | 312 | 9.40E-168 | 599.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81601.t1 | P46608 | 68.5 | 257 | 69 | 6 | 49 | 297 | 127 | 379 | 2.5e-92 | 340.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81601.t1 | D4NXR4 | 99.7 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 6.8e-168 | 599.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene81601.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene81601 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene050298 | MS.gene81601 | 0.807743 | 4.35E-50 | -1.69E-46 |
| MS.gene050563 | MS.gene81601 | 0.89754 | 1.27E-76 | -1.69E-46 |
| MS.gene050584 | MS.gene81601 | 0.828091 | 1.09E-54 | -1.69E-46 |
| MS.gene050585 | MS.gene81601 | 0.839639 | 1.41E-57 | -1.69E-46 |
| MS.gene050587 | MS.gene81601 | 0.825516 | 4.49E-54 | -1.69E-46 |
| MS.gene051789 | MS.gene81601 | 0.81246 | 4.19E-51 | -1.69E-46 |
| MS.gene052142 | MS.gene81601 | 0.839645 | 1.40E-57 | -1.69E-46 |
| MS.gene052698 | MS.gene81601 | 0.848492 | 5.92E-60 | -1.69E-46 |
| MS.gene053383 | MS.gene81601 | 0.898953 | 3.20E-77 | -1.69E-46 |
| MS.gene053563 | MS.gene81601 | 0.804048 | 2.60E-49 | -1.69E-46 |
| MS.gene05456 | MS.gene81601 | 0.87954 | 1.15E-69 | -1.69E-46 |
| MS.gene055359 | MS.gene81601 | 0.86149 | 9.89E-64 | -1.69E-46 |
| MS.gene057022 | MS.gene81601 | 0.810632 | 1.05E-50 | -1.69E-46 |
| MS.gene058918 | MS.gene81601 | 0.820535 | 6.52E-53 | -1.69E-46 |
| MS.gene059006 | MS.gene81601 | 0.850459 | 1.68E-60 | -1.69E-46 |
| MS.gene059768 | MS.gene81601 | 0.855114 | 7.84E-62 | -1.69E-46 |
| MS.gene060513 | MS.gene81601 | 0.804946 | 1.69E-49 | -1.69E-46 |
| MS.gene060691 | MS.gene81601 | 0.847144 | 1.39E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81601.t1 | MTR_5g085860 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 626 |
| MS.gene81601.t1 | MTR_2g024390 | 65.625 | 256 | 73 | 4 | 47 | 292 | 118 | 368 | 1.64e-109 | 322 |
| MS.gene81601.t1 | MTR_5g033720 | 53.226 | 248 | 101 | 4 | 38 | 275 | 64 | 306 | 8.84e-80 | 244 |
| MS.gene81601.t1 | MTR_1g017080 | 54.251 | 247 | 99 | 3 | 40 | 276 | 113 | 355 | 5.16e-77 | 239 |
| MS.gene81601.t1 | MTR_1g084060 | 48.235 | 255 | 107 | 4 | 41 | 278 | 14 | 260 | 1.82e-73 | 227 |
| MS.gene81601.t1 | MTR_1g084060 | 48.235 | 255 | 107 | 4 | 41 | 278 | 14 | 260 | 5.68e-73 | 227 |
| MS.gene81601.t1 | MTR_2g461240 | 30.370 | 270 | 142 | 5 | 35 | 263 | 75 | 339 | 5.98e-35 | 130 |
| MS.gene81601.t1 | MTR_3g106400 | 32.129 | 249 | 137 | 5 | 47 | 263 | 107 | 355 | 1.74e-34 | 129 |
| MS.gene81601.t1 | MTR_3g106400 | 32.129 | 249 | 137 | 5 | 47 | 263 | 107 | 355 | 1.88e-34 | 129 |
| MS.gene81601.t1 | MTR_1g012960 | 31.429 | 245 | 138 | 4 | 49 | 263 | 176 | 420 | 2.03e-34 | 130 |
| MS.gene81601.t1 | MTR_3g106400 | 32.129 | 249 | 137 | 5 | 47 | 263 | 107 | 355 | 5.23e-34 | 128 |
| MS.gene81601.t1 | MTR_5g011070 | 31.984 | 247 | 136 | 5 | 49 | 263 | 30 | 276 | 2.54e-32 | 121 |
| MS.gene81601.t1 | MTR_4g116545 | 30.667 | 300 | 147 | 11 | 4 | 263 | 37 | 315 | 2.95e-31 | 119 |
| MS.gene81601.t1 | MTR_4g116545 | 30.667 | 300 | 147 | 11 | 4 | 263 | 37 | 315 | 3.16e-31 | 119 |
| MS.gene81601.t1 | MTR_8g078480 | 39.394 | 99 | 53 | 4 | 176 | 269 | 546 | 642 | 2.66e-12 | 67.8 |
| MS.gene81601.t1 | MTR_5g018860 | 39.362 | 94 | 51 | 3 | 176 | 265 | 494 | 585 | 5.06e-12 | 66.6 |
| MS.gene81601.t1 | MTR_3g112300 | 35.135 | 111 | 60 | 3 | 161 | 265 | 302 | 406 | 4.18e-11 | 63.5 |
| MS.gene81601.t1 | MTR_3g112300 | 35.135 | 111 | 60 | 3 | 161 | 265 | 302 | 406 | 5.87e-11 | 63.2 |
| MS.gene81601.t1 | MTR_8g098815 | 37.634 | 93 | 56 | 1 | 175 | 265 | 338 | 430 | 8.28e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81601.t1 | AT1G62360 | 65.649 | 262 | 72 | 5 | 46 | 294 | 121 | 377 | 3.95e-108 | 319 |
| MS.gene81601.t1 | AT4G08150 | 56.667 | 240 | 89 | 3 | 49 | 276 | 137 | 373 | 6.31e-78 | 243 |
| MS.gene81601.t1 | AT1G23380 | 50.000 | 250 | 114 | 4 | 36 | 278 | 75 | 320 | 2.79e-76 | 236 |
| MS.gene81601.t1 | AT1G70510 | 49.398 | 249 | 113 | 3 | 38 | 278 | 61 | 304 | 7.99e-75 | 232 |
| MS.gene81601.t1 | AT1G23380 | 49.603 | 252 | 114 | 5 | 36 | 278 | 75 | 322 | 2.49e-74 | 231 |
| MS.gene81601.t1 | AT1G70510 | 48.617 | 253 | 113 | 4 | 38 | 278 | 61 | 308 | 1.12e-72 | 226 |
| MS.gene81601.t1 | AT5G25220 | 30.992 | 242 | 140 | 5 | 49 | 263 | 162 | 403 | 1.36e-36 | 135 |
| MS.gene81601.t1 | AT5G25220 | 30.992 | 242 | 140 | 5 | 49 | 263 | 162 | 403 | 1.91e-36 | 135 |
| MS.gene81601.t1 | AT5G11060 | 35.484 | 248 | 121 | 9 | 49 | 263 | 126 | 367 | 7.44e-36 | 133 |
| MS.gene81601.t1 | AT1G62990 | 29.880 | 251 | 137 | 5 | 47 | 263 | 30 | 275 | 5.45e-34 | 125 |
| MS.gene81601.t1 | AT4G32040 | 27.381 | 252 | 148 | 5 | 43 | 263 | 115 | 362 | 9.78e-30 | 116 |
| MS.gene81601.t1 | AT4G32040 | 27.381 | 252 | 148 | 5 | 43 | 263 | 115 | 362 | 1.25e-29 | 116 |
| MS.gene81601.t1 | AT4G36870 | 33.607 | 122 | 72 | 5 | 149 | 265 | 442 | 559 | 1.44e-11 | 65.5 |
| MS.gene81601.t1 | AT4G36870 | 33.607 | 122 | 72 | 5 | 149 | 265 | 442 | 559 | 1.44e-11 | 65.5 |
| MS.gene81601.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 176 | 265 | 394 | 485 | 2.34e-11 | 64.7 |
| MS.gene81601.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 176 | 265 | 394 | 485 | 2.34e-11 | 64.7 |
| MS.gene81601.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 176 | 265 | 394 | 485 | 2.34e-11 | 64.7 |
| MS.gene81601.t1 | AT1G14760 | 33.333 | 111 | 61 | 3 | 47 | 152 | 34 | 136 | 3.72e-11 | 60.5 |
| MS.gene81601.t1 | AT5G41410 | 40.698 | 86 | 43 | 2 | 211 | 290 | 398 | 481 | 9.79e-11 | 62.8 |
Find 63 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGCAAGTGCTTGCTTT+TGG | 0.251155 | 5.1:+67785478 | None:intergenic |
| TGTTGATCTGCTTCAAATCT+AGG | 0.290613 | 5.1:+67785448 | None:intergenic |
| TGTTGCTGTTGGTGTTGTTC+TGG | 0.309534 | 5.1:+67789274 | None:intergenic |
| GAAATATTGAATGGCTCTTC+AGG | 0.317305 | 5.1:-67788822 | MS.gene81601:CDS |
| CCTCTGAGTAACAATTCTTC+TGG | 0.333607 | 5.1:-67789327 | MS.gene81601:CDS |
| CTCTTACCTCAATTGCTTGA+AGG | 0.355056 | 5.1:-67789202 | MS.gene81601:intron |
| TGATGAACATGGAAACTAAT+AGG | 0.357473 | 5.1:-67789365 | MS.gene81601:CDS |
| TCTAAGCTAGCCACCACTTC+AGG | 0.359706 | 5.1:+67788864 | None:intergenic |
| CTTCACCTTGAGTAGTATCT+AGG | 0.374756 | 5.1:+67786490 | None:intergenic |
| TCCAGGTTTGGATCAGTTCA+TGG | 0.403203 | 5.1:-67788763 | MS.gene81601:CDS |
| TGAAGTGGTGGCTAGCTTAG+AGG | 0.404107 | 5.1:-67788862 | MS.gene81601:CDS |
| GAAAAGCATGGCTTCTTTGA+AGG | 0.406625 | 5.1:+67788692 | None:intergenic |
| ACACCAACAGCAACACTTGT+AGG | 0.429306 | 5.1:-67789266 | MS.gene81601:CDS |
| CGCAAGTATAGTGGATATCT+AGG | 0.434219 | 5.1:-67786441 | MS.gene81601:CDS |
| TACTACTCAAGGTGAAGATC+AGG | 0.439850 | 5.1:-67786484 | MS.gene81601:CDS |
| AGTTGCTGTCGAGCTTCCTT+TGG | 0.440818 | 5.1:+67786372 | None:intergenic |
| GGCATAGCATCCATAGGAAA+TGG | 0.441925 | 5.1:+67785321 | None:intergenic |
| CTCGACAGCAACTACTTGAT+TGG | 0.448986 | 5.1:-67786362 | MS.gene81601:CDS |
| TATAGGTGAAGATCCAGGTT+TGG | 0.460482 | 5.1:-67788775 | MS.gene81601:CDS |
| GGAAGTAGTAGTTCTTGTAT+AGG | 0.474614 | 5.1:-67788792 | MS.gene81601:CDS |
| AACTACTTGATTGGTGGAGC+AGG | 0.476464 | 5.1:-67786353 | MS.gene81601:CDS |
| ATTTGAAGCAGATCAACAAT+TGG | 0.483386 | 5.1:-67785443 | MS.gene81601:CDS |
| TCAGGACCTTCAAGCAATTG+AGG | 0.486076 | 5.1:+67789196 | None:intergenic |
| GTTGCTGTTTCAACTGACTT+TGG | 0.488737 | 5.1:-67788639 | MS.gene81601:intron |
| CAGCTTCTACGCAAGTATAG+TGG | 0.489736 | 5.1:-67786450 | MS.gene81601:CDS |
| AAAAGCATGGCTTCTTTGAA+GGG | 0.505700 | 5.1:+67788693 | None:intergenic |
| GGATATGCAATTTGCTGTGA+TGG | 0.523714 | 5.1:-67785382 | MS.gene81601:CDS |
| GCTGAGACTCAATTCTTGAA+AGG | 0.524479 | 5.1:+67788670 | None:intergenic |
| GGTGGAGCAGGCATTACAAA+TGG | 0.526535 | 5.1:-67786341 | MS.gene81601:CDS |
| CACTTGTAGGGATAAAATCA+TGG | 0.526660 | 5.1:-67789253 | MS.gene81601:CDS |
| TCCATGAACTGATCCAAACC+TGG | 0.528067 | 5.1:+67788762 | None:intergenic |
| ATCCCTACAAGTGTTGCTGT+TGG | 0.528373 | 5.1:+67789263 | None:intergenic |
| GACAGCAACTACTTGATTGG+TGG | 0.536393 | 5.1:-67786359 | MS.gene81601:CDS |
| AGAATAGTTACCGATGGGTA+AGG | 0.537725 | 5.1:+67786318 | None:intergenic |
| CTTCAAGCAATTGAGGTAAG+AGG | 0.538407 | 5.1:+67789203 | None:intergenic |
| TCTTGTATAGGTGAAGATCC+AGG | 0.538996 | 5.1:-67788780 | MS.gene81601:CDS |
| AATGGCTCTTCAGGAAGGAC+AGG | 0.539828 | 5.1:-67788813 | MS.gene81601:CDS |
| GACAAGAGACGAGGAAAGAG+AGG | 0.541929 | 5.1:+67789225 | None:intergenic |
| CACCAACAGCAACACTTGTA+GGG | 0.550032 | 5.1:-67789265 | MS.gene81601:CDS |
| AAGAATTGAGTCTCAGCTCA+AGG | 0.557965 | 5.1:-67788664 | MS.gene81601:CDS |
| AATTCTTGAAAGGAAAAGCA+TGG | 0.577216 | 5.1:+67788680 | None:intergenic |
| TTAATGTGCTAAAGAAGCAT+AGG | 0.578609 | 5.1:+67785300 | None:intergenic |
| TTAATCAGAGAAAACGCCAC+TGG | 0.580206 | 5.1:-67785416 | MS.gene81601:CDS |
| GGATGCCACAAATTACTACA+TGG | 0.582043 | 5.1:-67785361 | MS.gene81601:CDS |
| GATGTGCAAGCCATTTCCTA+TGG | 0.586987 | 5.1:-67785331 | MS.gene81601:CDS |
| GGTTGGAGCACCTCCTGAAG+TGG | 0.595718 | 5.1:-67788877 | MS.gene81601:CDS |
| CAAGCACTTGCAGAATCCAC+AGG | 0.600586 | 5.1:-67785471 | MS.gene81601:CDS |
| GCAAAATGTGAAATATTGAA+TGG | 0.601951 | 5.1:-67788831 | MS.gene81601:CDS |
| TCAAAATCAAATGATGAACA+TGG | 0.604915 | 5.1:-67789376 | MS.gene81601:CDS |
| TTACAAATGGCCTTACCCAT+CGG | 0.606989 | 5.1:-67786328 | MS.gene81601:intron |
| TGGAGCACCTCCTGAAGTGG+TGG | 0.608141 | 5.1:-67788874 | MS.gene81601:CDS |
| CTGCTTCAAATCTAGGCCTG+TGG | 0.610652 | 5.1:+67785455 | None:intergenic |
| TATTGAATGGCTCTTCAGGA+AGG | 0.613053 | 5.1:-67788818 | MS.gene81601:CDS |
| GCAAATTGCATATCCTCAGA+AGG | 0.614720 | 5.1:+67785390 | None:intergenic |
| ACGCCACTGGAAGCCTTCTG+AGG | 0.619253 | 5.1:-67785403 | MS.gene81601:CDS |
| AGCATAGGCATAGCATCCAT+AGG | 0.634428 | 5.1:+67785315 | None:intergenic |
| AAAGAATGGAAAGTTACCAA+AGG | 0.641055 | 5.1:-67786388 | MS.gene81601:CDS |
| AAGCTAGCCACCACTTCAGG+AGG | 0.647427 | 5.1:+67788867 | None:intergenic |
| AACAACCTAGATACTACTCA+AGG | 0.648557 | 5.1:-67786495 | MS.gene81601:CDS |
| CCAGAAGAATTGTTACTCAG+AGG | 0.660627 | 5.1:+67789327 | None:intergenic |
| TATCCTCAGAAGGCTTCCAG+TGG | 0.672824 | 5.1:+67785400 | None:intergenic |
| AGGTAAGAGGACAAGAGACG+AGG | 0.679022 | 5.1:+67789216 | None:intergenic |
| AGGTTTGGATCAGTTCATGG+AGG | 0.735955 | 5.1:-67788760 | MS.gene81601:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATAAATATTTTTTA+AGG | + | chr5.1:67788074-67788093 | None:intergenic | 0.0% |
| !! | ATGAAGATAATATAATTTAA+GGG | + | chr5.1:67786085-67786104 | None:intergenic | 10.0% |
| !! | ATTATATTGAAATTAACAAA+TGG | + | chr5.1:67787394-67787413 | None:intergenic | 10.0% |
| !! | TCTTTAAATTAAATTAAACT+TGG | - | chr5.1:67786961-67786980 | MS.gene81601:intron | 10.0% |
| !!! | AGATTTTTTTTTAAACTTTA+TGG | - | chr5.1:67785739-67785758 | MS.gene81601:intron | 10.0% |
| !! | AAACTTTAAATATTGTCATT+AGG | + | chr5.1:67788725-67788744 | None:intergenic | 15.0% |
| !! | CATGAAGATAATATAATTTA+AGG | + | chr5.1:67786086-67786105 | None:intergenic | 15.0% |
| !! | TATTTACTTACGATAAAAAA+GGG | + | chr5.1:67786366-67786385 | None:intergenic | 15.0% |
| !! | TTGTGAAATATTTATGTATT+TGG | + | chr5.1:67787492-67787511 | None:intergenic | 15.0% |
| !! | TTTGTGAATTATTTGTAATT+AGG | - | chr5.1:67788684-67788703 | MS.gene81601:CDS | 15.0% |
| !!! | AAGTAAATATTCATTTTAAC+TGG | - | chr5.1:67786139-67786158 | MS.gene81601:intron | 15.0% |
| !!! | ATTATTCTTTTATCAAATGT+AGG | - | chr5.1:67787619-67787638 | MS.gene81601:intron | 15.0% |
| !!! | ATTTTAGAATTTAAAAGATC+AGG | - | chr5.1:67788991-67789010 | MS.gene81601:intron | 15.0% |
| !!! | TATAATTTTTTTGCACAAAT+GGG | - | chr5.1:67786707-67786726 | MS.gene81601:intron | 15.0% |
| !!! | TTATTCTTTTATCAAATGTA+GGG | - | chr5.1:67787620-67787639 | MS.gene81601:intron | 15.0% |
| !!! | TTTAGAGTTTTTCATATAAT+AGG | - | chr5.1:67788543-67788562 | MS.gene81601:intron | 15.0% |
| !! | AAATAAATTATCGCAATCAT+AGG | + | chr5.1:67789038-67789057 | None:intergenic | 20.0% |
| !! | AAGTTTAATTCTCAAAACTA+AGG | - | chr5.1:67787046-67787065 | MS.gene81601:intron | 20.0% |
| !! | AATGAAACCTTAATATCAAA+TGG | - | chr5.1:67789138-67789157 | MS.gene81601:intron | 20.0% |
| !! | ACATAAATATTTCACAACTT+AGG | - | chr5.1:67787495-67787514 | MS.gene81601:intron | 20.0% |
| !! | ACTTTATAAAGAACGAATTA+AGG | + | chr5.1:67787030-67787049 | None:intergenic | 20.0% |
| !! | ATAAATATTTCACAACTTAG+GGG | - | chr5.1:67787497-67787516 | MS.gene81601:intron | 20.0% |
| !! | ATAAATCATTGACATATTCA+AGG | + | chr5.1:67788598-67788617 | None:intergenic | 20.0% |
| !! | CATAAATATTTCACAACTTA+GGG | - | chr5.1:67787496-67787515 | MS.gene81601:intron | 20.0% |
| !! | CTATTTACTTACGATAAAAA+AGG | + | chr5.1:67786367-67786386 | None:intergenic | 20.0% |
| !! | TAACAATTGCCTATAAAAAA+GGG | + | chr5.1:67787850-67787869 | None:intergenic | 20.0% |
| !! | TAAGTGCAATTAGTAATATT+TGG | - | chr5.1:67787788-67787807 | MS.gene81601:intron | 20.0% |
| !! | TAGAAAAGAGAAAAAAAGAA+TGG | - | chr5.1:67786216-67786235 | MS.gene81601:intron | 20.0% |
| !! | TAGTTTAGTAAATTGTTAGA+GGG | - | chr5.1:67787868-67787887 | MS.gene81601:intron | 20.0% |
| !! | TTAGTTTAGTAAATTGTTAG+AGG | - | chr5.1:67787867-67787886 | MS.gene81601:intron | 20.0% |
| !!! | AATGTTAATAAACTTTTCCA+AGG | + | chr5.1:67786117-67786136 | None:intergenic | 20.0% |
| !!! | AGTTTCTGATGTTTTAAATA+AGG | + | chr5.1:67788888-67788907 | None:intergenic | 20.0% |
| !!! | ATCTTGATTTATAGCATTTT+AGG | - | chr5.1:67788492-67788511 | MS.gene81601:intron | 20.0% |
| !!! | ATTAAAGTAAAATGAGGTTT+TGG | - | chr5.1:67786505-67786524 | MS.gene81601:CDS | 20.0% |
| !!! | ATTCTTTTTTTCTCTTTTCT+AGG | + | chr5.1:67786217-67786236 | None:intergenic | 20.0% |
| !!! | GTATAATTTTTTTGCACAAA+TGG | - | chr5.1:67786706-67786725 | MS.gene81601:intron | 20.0% |
| !!! | GTTTCTGATGTTTTAAATAA+GGG | + | chr5.1:67788887-67788906 | None:intergenic | 20.0% |
| !!! | TAAATTAAACTTGGTGAAAA+AGG | - | chr5.1:67786970-67786989 | MS.gene81601:intron | 20.0% |
| !!! | TACTGATTATTTTAACGTTA+GGG | - | chr5.1:67788912-67788931 | MS.gene81601:intron | 20.0% |
| !!! | TATGTCTAAAGTAATTTACA+CGG | - | chr5.1:67786662-67786681 | MS.gene81601:intron | 20.0% |
| !!! | TTGAAATTGTGTTTTTAACA+TGG | - | chr5.1:67786421-67786440 | MS.gene81601:CDS | 20.0% |
| !!! | TTTAGGTTTGATTATTTTGA+AGG | - | chr5.1:67788509-67788528 | MS.gene81601:intron | 20.0% |
| !!! | TTTTTGAAGAAGAAAAAGAA+TGG | - | chr5.1:67788290-67788309 | MS.gene81601:intron | 20.0% |
| ! | AAACTAAACTACTACAAAAG+AGG | + | chr5.1:67787106-67787125 | None:intergenic | 25.0% |
| ! | AAACTAATAAATGTCTAGTC+AGG | + | chr5.1:67788017-67788036 | None:intergenic | 25.0% |
| ! | AAATGATAGATTACTTCCTA+TGG | - | chr5.1:67786478-67786497 | MS.gene81601:CDS | 25.0% |
| ! | AACAAAATTGAACATAACCA+AGG | + | chr5.1:67786827-67786846 | None:intergenic | 25.0% |
| ! | AACAATTGCCTATAAAAAAG+GGG | + | chr5.1:67787849-67787868 | None:intergenic | 25.0% |
| ! | AACTAAACTACTACAAAAGA+GGG | + | chr5.1:67787105-67787124 | None:intergenic | 25.0% |
| ! | AATGATAGATTACTTCCTAT+GGG | - | chr5.1:67786479-67786498 | MS.gene81601:CDS | 25.0% |
| ! | AGTTCTTTCCTATCATTAAA+TGG | + | chr5.1:67787317-67787336 | None:intergenic | 25.0% |
| ! | AGTTTAGTAAATTGTTAGAG+GGG | - | chr5.1:67787869-67787888 | MS.gene81601:intron | 25.0% |
| ! | ATTCCTTAACTTCATTTACA+TGG | - | chr5.1:67786910-67786929 | MS.gene81601:intron | 25.0% |
| ! | CTAACAATTGCCTATAAAAA+AGG | + | chr5.1:67787851-67787870 | None:intergenic | 25.0% |
| ! | CTTCTTCATTAAGAATCTTA+TGG | - | chr5.1:67787558-67787577 | MS.gene81601:intron | 25.0% |
| ! | GAAAAACTCTAAATTGTTCA+GGG | + | chr5.1:67788536-67788555 | None:intergenic | 25.0% |
| ! | GCAAAATGTGAAATATTGAA+TGG | - | chr5.1:67785861-67785880 | MS.gene81601:intron | 25.0% |
| ! | GGGAATTTGAATAAAAATTG+AGG | + | chr5.1:67786741-67786760 | None:intergenic | 25.0% |
| ! | GTATTAGCCATTTGATATTA+AGG | + | chr5.1:67789148-67789167 | None:intergenic | 25.0% |
| ! | GTTCTTTCCTATCATTAAAT+GGG | + | chr5.1:67787316-67787335 | None:intergenic | 25.0% |
| ! | TAAGATTCTTAATGAAGAAG+TGG | + | chr5.1:67787558-67787577 | None:intergenic | 25.0% |
| ! | TCAAAATCAAATGATGAACA+TGG | - | chr5.1:67785316-67785335 | MS.gene81601:CDS | 25.0% |
| ! | TCAATGTTCATAATCATATC+TGG | - | chr5.1:67788465-67788484 | MS.gene81601:intron | 25.0% |
| ! | TCTTCAAAAACTCTTTCTTA+AGG | + | chr5.1:67788280-67788299 | None:intergenic | 25.0% |
| ! | TGAAAAACTCTAAATTGTTC+AGG | + | chr5.1:67788537-67788556 | None:intergenic | 25.0% |
| ! | TGTAATTAGGTACGAAATTT+AGG | - | chr5.1:67788697-67788716 | MS.gene81601:CDS | 25.0% |
| ! | TTAAAAGTAAGCTCAAATGA+TGG | - | chr5.1:67787458-67787477 | MS.gene81601:intron | 25.0% |
| !! | AAATGTAGTAAGTATTGCAT+TGG | + | chr5.1:67788825-67788844 | None:intergenic | 25.0% |
| !! | AGGTAAATTTTTCATTTGCA+TGG | - | chr5.1:67787066-67787085 | MS.gene81601:intron | 25.0% |
| !! | ATAAACTTTTCCAAGGATAA+TGG | + | chr5.1:67786110-67786129 | None:intergenic | 25.0% |
| !! | ATTTTCCATGTAGTAATTTG+TGG | + | chr5.1:67789339-67789358 | None:intergenic | 25.0% |
| !! | TCTCAAAAACAAACATTTTG+TGG | + | chr5.1:67785722-67785741 | None:intergenic | 25.0% |
| !! | TTCTCTTTTCTAGGTTTTTA+GGG | + | chr5.1:67786208-67786227 | None:intergenic | 25.0% |
| !! | TTTAGAACATTAGTTGTTGT+TGG | - | chr5.1:67787715-67787734 | MS.gene81601:intron | 25.0% |
| !! | TTTCTCTTTTCTAGGTTTTT+AGG | + | chr5.1:67786209-67786228 | None:intergenic | 25.0% |
| !!! | AAATGCTTCATTTTTACACA+TGG | - | chr5.1:67787420-67787439 | MS.gene81601:intron | 25.0% |
| !!! | AATGCTTCATTTTTACACAT+GGG | - | chr5.1:67787421-67787440 | MS.gene81601:intron | 25.0% |
| !!! | CTACTGATTATTTTAACGTT+AGG | - | chr5.1:67788911-67788930 | MS.gene81601:intron | 25.0% |
| !!! | TAGTGTGATTAGAGTTTTAA+AGG | - | chr5.1:67786384-67786403 | MS.gene81601:CDS | 25.0% |
| !!! | TTTAAGTGTGATTTTTTTGC+AGG | - | chr5.1:67785794-67785813 | MS.gene81601:intron | 25.0% |
| !!! | TTTTACTTTAATTTCCCCAT+AGG | + | chr5.1:67786497-67786516 | None:intergenic | 25.0% |
| AAAAATGCCTTCAAAACATC+CGG | + | chr5.1:67786784-67786803 | None:intergenic | 30.0% | |
| AAAGAATGGAAAGTTACCAA+AGG | - | chr5.1:67788304-67788323 | MS.gene81601:intron | 30.0% | |
| AAATCCATCAAGATTGCATT+GGG | + | chr5.1:67786761-67786780 | None:intergenic | 30.0% | |
| AATTCTTGAAAGGAAAAGCA+TGG | + | chr5.1:67786015-67786034 | None:intergenic | 30.0% | |
| ACCCATATGAAAATCAACTA+AGG | + | chr5.1:67787165-67787184 | None:intergenic | 30.0% | |
| ATGATAGATTACTTCCTATG+GGG | - | chr5.1:67786480-67786499 | MS.gene81601:CDS | 30.0% | |
| ATGATATTCACACAAACACT+AGG | + | chr5.1:67786857-67786876 | None:intergenic | 30.0% | |
| GAACCATGTAAATGAAGTTA+AGG | + | chr5.1:67786916-67786935 | None:intergenic | 30.0% | |
| GGGGAAATTAAAGTAAAATG+AGG | - | chr5.1:67786499-67786518 | MS.gene81601:CDS | 30.0% | |
| TAAATTATCGCAATCATAGG+AGG | + | chr5.1:67789035-67789054 | None:intergenic | 30.0% | |
| TGAAAGTCCCATTTAATGAT+AGG | - | chr5.1:67787306-67787325 | MS.gene81601:intron | 30.0% | |
| TGATGAACATGGAAACTAAT+AGG | - | chr5.1:67785327-67785346 | MS.gene81601:CDS | 30.0% | |
| TTAAGGAAAACATACGACAT+AGG | + | chr5.1:67787013-67787032 | None:intergenic | 30.0% | |
| TTCGAGATCAAAAACATTAG+AGG | - | chr5.1:67788937-67788956 | MS.gene81601:intron | 30.0% | |
| TTGAACTAGGTTAAAAGGTT+TGG | - | chr5.1:67786455-67786474 | MS.gene81601:CDS | 30.0% | |
| TTGTGATTTGATGAACATGT+AGG | - | chr5.1:67789187-67789206 | MS.gene81601:intron | 30.0% | |
| ! | ATTTGAAGCAGATCAACAAT+TGG | - | chr5.1:67789249-67789268 | MS.gene81601:CDS | 30.0% |
| ! | CATCAATTGACAAAGTCTTT+TGG | - | chr5.1:67787337-67787356 | MS.gene81601:intron | 30.0% |
| ! | GTCAATGATTTATGCTTTTG+AGG | - | chr5.1:67788782-67788801 | MS.gene81601:CDS | 30.0% |
| ! | TGTAGTAGTTTAGTTTCTAG+TGG | - | chr5.1:67787110-67787129 | MS.gene81601:intron | 30.0% |
| !! | GCCTTAGTTGATTTTCATAT+GGG | - | chr5.1:67787161-67787180 | MS.gene81601:intron | 30.0% |
| !! | TCTCTTTTCTAGGTTTTTAG+GGG | + | chr5.1:67786207-67786226 | None:intergenic | 30.0% |
| !! | TGCCTTAGTTGATTTTCATA+TGG | - | chr5.1:67787160-67787179 | MS.gene81601:intron | 30.0% |
| !!! | GAATGGTCTATGTGTTTTTT+TGG | - | chr5.1:67786233-67786252 | MS.gene81601:intron | 30.0% |
| !!! | TGGTGTTGTGTTATTTTGAA+AGG | - | chr5.1:67788128-67788147 | MS.gene81601:intron | 30.0% |
| !!! | TTACATGACCCCTTTTTTAT+AGG | - | chr5.1:67787838-67787857 | MS.gene81601:intron | 30.0% |
| AACAACCTAGATACTACTCA+AGG | - | chr5.1:67788197-67788216 | MS.gene81601:intron | 35.0% | |
| AATTCCCAATGCAATCTTGA+TGG | - | chr5.1:67786754-67786773 | MS.gene81601:intron | 35.0% | |
| ACACAACACCACAAATCAAA+CGG | + | chr5.1:67788119-67788138 | None:intergenic | 35.0% | |
| ACATTGAAGGAGATTTAAGG+AGG | + | chr5.1:67787932-67787951 | None:intergenic | 35.0% | |
| AGATGTAGAATAGTTACCGA+TGG | + | chr5.1:67788383-67788402 | None:intergenic | 35.0% | |
| ATCTTCATGACCATTATCCT+TGG | - | chr5.1:67786097-67786116 | MS.gene81601:intron | 35.0% | |
| ATGACCAAGAATTAGTGAGA+TGG | - | chr5.1:67786340-67786359 | MS.gene81601:CDS | 35.0% | |
| ATTTCTTAATCAATGCCCAG+GGG | - | chr5.1:67788846-67788865 | MS.gene81601:CDS | 35.0% | |
| CACTTGTAGGGATAAAATCA+TGG | - | chr5.1:67785439-67785458 | MS.gene81601:CDS | 35.0% | |
| CAGTTCATGTAATCATTGTC+CGG | + | chr5.1:67787984-67788003 | None:intergenic | 35.0% | |
| GAAAGAAGAACTAACACACA+AGG | + | chr5.1:67786881-67786900 | None:intergenic | 35.0% | |
| GAAATATTGAATGGCTCTTC+AGG | - | chr5.1:67785870-67785889 | MS.gene81601:intron | 35.0% | |
| GAAATCCATCAAGATTGCAT+TGG | + | chr5.1:67786762-67786781 | None:intergenic | 35.0% | |
| GATGTAGAATAGTTACCGAT+GGG | + | chr5.1:67788382-67788401 | None:intergenic | 35.0% | |
| GATTTCTTAATCAATGCCCA+GGG | - | chr5.1:67788845-67788864 | MS.gene81601:CDS | 35.0% | |
| GGAAGTAGTAGTTCTTGTAT+AGG | - | chr5.1:67785900-67785919 | MS.gene81601:intron | 35.0% | |
| GGTGATAATTGAACTACTAG+AGG | + | chr5.1:67786183-67786202 | None:intergenic | 35.0% | |
| GGTGTTTGAACTAGGTTAAA+AGG | - | chr5.1:67786450-67786469 | MS.gene81601:CDS | 35.0% | |
| GTCATATTATACTTACCTCG+CGG | + | chr5.1:67786325-67786344 | None:intergenic | 35.0% | |
| TAATTGAACTACTAGAGGTG+TGG | + | chr5.1:67786178-67786197 | None:intergenic | 35.0% | |
| TCATATATCAATCATGCCGT+TGG | - | chr5.1:67788412-67788431 | MS.gene81601:intron | 35.0% | |
| TGACAACTACGATTGATTGT+TGG | + | chr5.1:67786608-67786627 | None:intergenic | 35.0% | |
| TGATTTCTTAATCAATGCCC+AGG | - | chr5.1:67788844-67788863 | MS.gene81601:CDS | 35.0% | |
| TGTGCTATGAAACATTCCAA+CGG | + | chr5.1:67788431-67788450 | None:intergenic | 35.0% | |
| TGTTAACCCTCTAGTTACTA+GGG | - | chr5.1:67786273-67786292 | MS.gene81601:intron | 35.0% | |
| TGTTGATCTGCTTCAAATCT+AGG | + | chr5.1:67789247-67789266 | None:intergenic | 35.0% | |
| TTAACCTAGTTCAAACACCT+TGG | + | chr5.1:67786449-67786468 | None:intergenic | 35.0% | |
| ! | AAAAGCATGGCTTCTTTGAA+GGG | + | chr5.1:67786002-67786021 | None:intergenic | 35.0% |
| !! | AGTAGTTTAGTTTCTAGTGG+TGG | - | chr5.1:67787113-67787132 | MS.gene81601:intron | 35.0% |
| !! | ATGCAATCTTGATGGATTTC+CGG | - | chr5.1:67786762-67786781 | MS.gene81601:intron | 35.0% |
| !! | CTCTTTTCTAGGTTTTTAGG+GGG | + | chr5.1:67786206-67786225 | None:intergenic | 35.0% |
| !! | GTGTTTTTAACATGGATCCA+AGG | - | chr5.1:67786429-67786448 | MS.gene81601:CDS | 35.0% |
| !! | TAGTTCTTCCGTTTGATTTG+TGG | - | chr5.1:67788108-67788127 | MS.gene81601:intron | 35.0% |
| !! | TCTTTTCTAGGTTTTTAGGG+GGG | + | chr5.1:67786205-67786224 | None:intergenic | 35.0% |
| !!! | AGTGTGATTTTTTTGCAGGT+TGG | - | chr5.1:67785798-67785817 | MS.gene81601:intron | 35.0% |
| !!! | CAAGTTTTCGCTTGTTTTGA+TGG | - | chr5.1:67785771-67785790 | MS.gene81601:intron | 35.0% |
| AAGAATTGAGTCTCAGCTCA+AGG | - | chr5.1:67786028-67786047 | MS.gene81601:intron | 40.0% | |
| AAGCATTCCTCACACTAATG+TGG | - | chr5.1:67787678-67787697 | MS.gene81601:intron | 40.0% | |
| AGAATAGTTACCGATGGGTA+AGG | + | chr5.1:67788377-67788396 | None:intergenic | 40.0% | |
| AGCATTCCTCACACTAATGT+GGG | - | chr5.1:67787679-67787698 | MS.gene81601:intron | 40.0% | |
| AGTAAATTGTTAGAGGGGAG+AGG | - | chr5.1:67787874-67787893 | MS.gene81601:intron | 40.0% | |
| CCAGAAGAATTGTTACTCAG+AGG | + | chr5.1:67785368-67785387 | None:intergenic | 40.0% | |
| CCTCTGAGTAACAATTCTTC+TGG | - | chr5.1:67785365-67785384 | MS.gene81601:CDS | 40.0% | |
| CTCTTACCTCAATTGCTTGA+AGG | - | chr5.1:67785490-67785509 | MS.gene81601:intron | 40.0% | |
| CTTCAAGCAATTGAGGTAAG+AGG | + | chr5.1:67785492-67785511 | None:intergenic | 40.0% | |
| CTTCACCTTGAGTAGTATCT+AGG | + | chr5.1:67788205-67788224 | None:intergenic | 40.0% | |
| GCTGAGACTCAATTCTTGAA+AGG | + | chr5.1:67786025-67786044 | None:intergenic | 40.0% | |
| GGATGCCACAAATTACTACA+TGG | - | chr5.1:67789331-67789350 | MS.gene81601:CDS | 40.0% | |
| GGGACATTGAAGGAGATTTA+AGG | + | chr5.1:67787935-67787954 | None:intergenic | 40.0% | |
| GGGACTTTCAACTTCTTTAG+TGG | + | chr5.1:67787296-67787315 | None:intergenic | 40.0% | |
| GTAAATTGTTAGAGGGGAGA+GGG | - | chr5.1:67787875-67787894 | MS.gene81601:intron | 40.0% | |
| GTGTTAACCCTCTAGTTACT+AGG | - | chr5.1:67786272-67786291 | MS.gene81601:intron | 40.0% | |
| TAACCAAGGTCACACATGAA+AGG | + | chr5.1:67786813-67786832 | None:intergenic | 40.0% | |
| TACTACTCAAGGTGAAGATC+AGG | - | chr5.1:67788208-67788227 | MS.gene81601:intron | 40.0% | |
| TAGTTTCCGAGGATCAAACT+CGG | - | chr5.1:67787904-67787923 | MS.gene81601:intron | 40.0% | |
| TATAGGTGAAGATCCAGGTT+TGG | - | chr5.1:67785917-67785936 | MS.gene81601:intron | 40.0% | |
| TATTGAATGGCTCTTCAGGA+AGG | - | chr5.1:67785874-67785893 | MS.gene81601:intron | 40.0% | |
| TCTTGTATAGGTGAAGATCC+AGG | - | chr5.1:67785912-67785931 | MS.gene81601:intron | 40.0% | |
| TGCTATGCCTATGCTTCTTT+AGG | - | chr5.1:67789385-67789404 | MS.gene81601:CDS | 40.0% | |
| TTAATCAGAGAAAACGCCAC+TGG | - | chr5.1:67789276-67789295 | MS.gene81601:CDS | 40.0% | |
| TTCACAACTTAGGGGATGAT+TGG | - | chr5.1:67787505-67787524 | MS.gene81601:intron | 40.0% | |
| TTTCCTTTCATGTGTGACCT+TGG | - | chr5.1:67786807-67786826 | MS.gene81601:intron | 40.0% | |
| ! | ATTCTGCAAGTGCTTGCTTT+TGG | + | chr5.1:67789217-67789236 | None:intergenic | 40.0% |
| ! | GAAAAGCATGGCTTCTTTGA+AGG | + | chr5.1:67786003-67786022 | None:intergenic | 40.0% |
| ! | TGTGTGAGAGTTTGAAGTTC+AGG | + | chr5.1:67785517-67785536 | None:intergenic | 40.0% |
| ! | TTACAAATGGCCTTACCCAT+CGG | - | chr5.1:67788364-67788383 | MS.gene81601:intron | 40.0% |
| !! | AGTTTAGTTTCTAGTGGTGG+AGG | - | chr5.1:67787116-67787135 | MS.gene81601:intron | 40.0% |
| !! | CGCAAGTATAGTGGATATCT+AGG | - | chr5.1:67788251-67788270 | MS.gene81601:intron | 40.0% |
| !! | CTTTTCTAGGTTTTTAGGGG+GGG | + | chr5.1:67786204-67786223 | None:intergenic | 40.0% |
| !! | GGATATGCAATTTGCTGTGA+TGG | - | chr5.1:67789310-67789329 | MS.gene81601:CDS | 40.0% |
| !! | GTTGCTGTTTCAACTGACTT+TGG | - | chr5.1:67786053-67786072 | MS.gene81601:intron | 40.0% |
| !! | TGGATTTCCGGATGTTTTGA+AGG | - | chr5.1:67786774-67786793 | MS.gene81601:intron | 40.0% |
| !! | TTCTGCAAGTGCTTGCTTTT+GGG | + | chr5.1:67789216-67789235 | None:intergenic | 40.0% |
| AACTACTTGATTGGTGGAGC+AGG | - | chr5.1:67788339-67788358 | MS.gene81601:intron | 45.0% | |
| ACACCAACAGCAACACTTGT+AGG | - | chr5.1:67785426-67785445 | MS.gene81601:CDS | 45.0% | |
| AGCATAGGCATAGCATCCAT+AGG | + | chr5.1:67789380-67789399 | None:intergenic | 45.0% | |
| AGGGCCATCTCACTAATTCT+TGG | + | chr5.1:67786347-67786366 | None:intergenic | 45.0% | |
| AGGTTTGGATCAGTTCATGG+AGG | - | chr5.1:67785932-67785951 | MS.gene81601:intron | 45.0% | |
| ATGTAATCATTGTCCGGCGT+AGG | + | chr5.1:67787978-67787997 | None:intergenic | 45.0% | |
| CACCAACAGCAACACTTGTA+GGG | - | chr5.1:67785427-67785446 | MS.gene81601:CDS | 45.0% | |
| CAGCTTCTACGCAAGTATAG+TGG | - | chr5.1:67788242-67788261 | MS.gene81601:intron | 45.0% | |
| CGACATAGGATGACAAGACA+TGG | + | chr5.1:67786999-67787018 | None:intergenic | 45.0% | |
| CTCGACAGCAACTACTTGAT+TGG | - | chr5.1:67788330-67788349 | MS.gene81601:intron | 45.0% | |
| GACAGCAACTACTTGATTGG+TGG | - | chr5.1:67788333-67788352 | MS.gene81601:intron | 45.0% | |
| GATGTGCAAGCCATTTCCTA+TGG | - | chr5.1:67789361-67789380 | MS.gene81601:CDS | 45.0% | |
| GGCATAGCATCCATAGGAAA+TGG | + | chr5.1:67789374-67789393 | None:intergenic | 45.0% | |
| TAATGTTAACCGATGCCCCT+GGG | + | chr5.1:67788864-67788883 | None:intergenic | 45.0% | |
| TAGGGGATGATTGGCAATGT+GGG | - | chr5.1:67787514-67787533 | MS.gene81601:intron | 45.0% | |
| TCAGGACCTTCAAGCAATTG+AGG | + | chr5.1:67785499-67785518 | None:intergenic | 45.0% | |
| TCCAGGTTTGGATCAGTTCA+TGG | - | chr5.1:67785929-67785948 | MS.gene81601:intron | 45.0% | |
| TCCATGAACTGATCCAAACC+TGG | + | chr5.1:67785933-67785952 | None:intergenic | 45.0% | |
| TTAGGGGATGATTGGCAATG+TGG | - | chr5.1:67787513-67787532 | MS.gene81601:intron | 45.0% | |
| TTGTGTCCCACATTAGTGTG+AGG | + | chr5.1:67787688-67787707 | None:intergenic | 45.0% | |
| ! | ATCCCTACAAGTGTTGCTGT+TGG | + | chr5.1:67785432-67785451 | None:intergenic | 45.0% |
| ! | GAGGGAAATGTTAGTTTCCG+AGG | - | chr5.1:67787893-67787912 | MS.gene81601:intron | 45.0% |
| ! | GGATCCAAGGTGTTTGAACT+AGG | - | chr5.1:67786442-67786461 | MS.gene81601:CDS | 45.0% |
| !! | TGTTGCTGTTGGTGTTGTTC+TGG | + | chr5.1:67785421-67785440 | None:intergenic | 45.0% |
| !!! | AAATAGTTTTTTTTTTTTTA+AGG | + | chr5.1:67787233-67787252 | None:intergenic | 5.0% |
| !!! | AGTTTTTTTTTTTTTTTTTA+AGG | + | chr5.1:67788652-67788671 | None:intergenic | 5.0% |
| AACCCTCTAGTTACTAGGGC+AGG | - | chr5.1:67786277-67786296 | MS.gene81601:intron | 50.0% | |
| AATGGCTCTTCAGGAAGGAC+AGG | - | chr5.1:67785879-67785898 | MS.gene81601:intron | 50.0% | |
| AATGTGGGACACGAGTGGAT+TGG | - | chr5.1:67787529-67787548 | MS.gene81601:intron | 50.0% | |
| ACCCTCTAGTTACTAGGGCA+GGG | - | chr5.1:67786278-67786297 | MS.gene81601:intron | 50.0% | |
| AGGTAAGAGGACAAGAGACG+AGG | + | chr5.1:67785479-67785498 | None:intergenic | 50.0% | |
| AGTTGCTGTCGAGCTTCCTT+TGG | + | chr5.1:67788323-67788342 | None:intergenic | 50.0% | |
| CAAGCACTTGCAGAATCCAC+AGG | - | chr5.1:67789221-67789240 | MS.gene81601:CDS | 50.0% | |
| CTGCTTCAAATCTAGGCCTG+TGG | + | chr5.1:67789240-67789259 | None:intergenic | 50.0% | |
| GACAAGAGACGAGGAAAGAG+AGG | + | chr5.1:67785470-67785489 | None:intergenic | 50.0% | |
| GAGGTTCCGAGTTTGATCCT+CGG | + | chr5.1:67787913-67787932 | None:intergenic | 50.0% | |
| GGTGAGCTAAGGGACATTGA+AGG | + | chr5.1:67787945-67787964 | None:intergenic | 50.0% | |
| GGTGGAGCAGGCATTACAAA+TGG | - | chr5.1:67788351-67788370 | MS.gene81601:intron | 50.0% | |
| GTAATGTTAACCGATGCCCC+TGG | + | chr5.1:67788865-67788884 | None:intergenic | 50.0% | |
| TCTAAGCTAGCCACCACTTC+AGG | + | chr5.1:67785831-67785850 | None:intergenic | 50.0% | |
| ! | TAATCAATGCCCAGGGGCAT+CGG | - | chr5.1:67788852-67788871 | MS.gene81601:CDS | 50.0% |
| !! | AGTTTCTAGTGGTGGAGGCA+GGG | - | chr5.1:67787121-67787140 | MS.gene81601:intron | 50.0% |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | + | chr5.1:67787955-67787974 | None:intergenic | 50.0% |
| !! | TAGTTTCTAGTGGTGGAGGC+AGG | - | chr5.1:67787120-67787139 | MS.gene81601:intron | 50.0% |
| !! | TGAAGTGGTGGCTAGCTTAG+AGG | - | chr5.1:67785830-67785849 | MS.gene81601:intron | 50.0% |
| AAGCTAGCCACCACTTCAGG+AGG | + | chr5.1:67785828-67785847 | None:intergenic | 55.0% | |
| ATTGTCCGGCGTAGGTAGCT+CGG | + | chr5.1:67787970-67787989 | None:intergenic | 55.0% | |
| CCCCTGCCCTAGTAACTAGA+GGG | + | chr5.1:67786282-67786301 | None:intergenic | 55.0% | |
| CCCTCTAGTTACTAGGGCAG+GGG | - | chr5.1:67786279-67786298 | MS.gene81601:intron | 55.0% | |
| CGGCCAACTCTGGATTACCA+GGG | + | chr5.1:67786305-67786324 | None:intergenic | 55.0% | |
| TTGGCAATGTGGGACACGAG+TGG | - | chr5.1:67787524-67787543 | MS.gene81601:intron | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | + | chr5.1:67787956-67787975 | None:intergenic | 55.0% |
| !! | GTTTCTAGTGGTGGAGGCAG+GGG | - | chr5.1:67787122-67787141 | MS.gene81601:intron | 55.0% |
| ACCAACCGAGCTACCTACGC+CGG | - | chr5.1:67787962-67787981 | MS.gene81601:intron | 60.0% | |
| ACTTACCTCGCGGCCAACTC+TGG | + | chr5.1:67786315-67786334 | None:intergenic | 60.0% | |
| GCCCCTGCCCTAGTAACTAG+AGG | + | chr5.1:67786283-67786302 | None:intergenic | 60.0% | |
| GCGGCCAACTCTGGATTACC+AGG | + | chr5.1:67786306-67786325 | None:intergenic | 60.0% | |
| GGGCCCTGGTAATCCAGAGT+TGG | - | chr5.1:67786299-67786318 | MS.gene81601:intron | 60.0% | |
| GTAATCCAGAGTTGGCCGCG+AGG | - | chr5.1:67786307-67786326 | MS.gene81601:intron | 60.0% | |
| ! | GGTTGGAGCACCTCCTGAAG+TGG | - | chr5.1:67785815-67785834 | MS.gene81601:intron | 60.0% |
| ! | TGGAGCACCTCCTGAAGTGG+TGG | - | chr5.1:67785818-67785837 | MS.gene81601:intron | 60.0% |
| AGTTACTAGGGCAGGGGCCC+TGG | - | chr5.1:67786285-67786304 | MS.gene81601:intron | 65.0% | |
| TCCGGCGTAGGTAGCTCGGT+TGG | + | chr5.1:67787966-67787985 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 67785308 | 67789406 | 67785308 | ID=MS.gene81601 |
| chr5.1 | mRNA | 67785308 | 67789406 | 67785308 | ID=MS.gene81601.t1;Parent=MS.gene81601 |
| chr5.1 | exon | 67789203 | 67789406 | 67789203 | ID=MS.gene81601.t1.exon1;Parent=MS.gene81601.t1 |
| chr5.1 | CDS | 67789203 | 67789406 | 67789203 | ID=cds.MS.gene81601.t1;Parent=MS.gene81601.t1 |
| chr5.1 | exon | 67788640 | 67788898 | 67788640 | ID=MS.gene81601.t1.exon2;Parent=MS.gene81601.t1 |
| chr5.1 | CDS | 67788640 | 67788898 | 67788640 | ID=cds.MS.gene81601.t1;Parent=MS.gene81601.t1 |
| chr5.1 | exon | 67786329 | 67786564 | 67786329 | ID=MS.gene81601.t1.exon3;Parent=MS.gene81601.t1 |
| chr5.1 | CDS | 67786329 | 67786564 | 67786329 | ID=cds.MS.gene81601.t1;Parent=MS.gene81601.t1 |
| chr5.1 | exon | 67785308 | 67785505 | 67785308 | ID=MS.gene81601.t1.exon4;Parent=MS.gene81601.t1 |
| chr5.1 | CDS | 67785308 | 67785505 | 67785308 | ID=cds.MS.gene81601.t1;Parent=MS.gene81601.t1 |
| Gene Sequence |
| Protein sequence |
