AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene83313


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83313.t1 MTR_6g069000 98.673 452 6 0 1 452 1 452 0.0 929
MS.gene83313.t1 MTR_6g069000 98.673 452 6 0 1 452 11 462 0.0 929
MS.gene83313.t1 MTR_8g077810 36.585 451 279 4 32 475 25 475 5.22e-109 333
MS.gene83313.t1 MTR_5g020020 35.242 454 282 5 30 475 26 475 2.85e-106 325
MS.gene83313.t1 MTR_5g082520 35.165 455 282 5 31 480 19 465 8.30e-104 318
MS.gene83313.t1 MTR_7g033040 35.032 471 293 6 12 477 5 467 6.32e-103 316
MS.gene83313.t1 MTR_8g016180 32.979 470 301 6 5 469 1 461 3.50e-102 314
MS.gene83313.t1 MTR_3g070380 34.735 452 284 6 39 485 28 473 2.67e-101 312
MS.gene83313.t1 MTR_8g076510 32.962 449 278 10 41 478 40 476 3.73e-92 288
MS.gene83313.t1 MTR_5g021220 30.515 485 296 9 11 469 9 478 1.37e-87 277
MS.gene83313.t1 MTR_8g016180 31.931 404 269 4 5 403 1 403 3.94e-83 263
MS.gene83313.t1 MTR_5g010750 31.729 457 293 7 38 483 29 477 2.29e-82 263
MS.gene83313.t1 MTR_6g015910 29.362 470 306 8 12 475 10 459 1.17e-77 250
MS.gene83313.t1 MTR_7g016040 30.556 468 306 6 10 475 8 458 1.70e-77 250
MS.gene83313.t1 MTR_3g007320 28.723 470 309 8 12 475 10 459 2.37e-77 249
MS.gene83313.t1 MTR_5g010750 32.227 422 271 6 38 452 29 442 5.82e-77 248
MS.gene83313.t1 MTR_8g089800 30.415 434 279 9 40 459 43 467 5.35e-71 234
MS.gene83313.t1 MTR_5g020020 33.432 338 213 5 146 475 68 401 2.16e-69 227
MS.gene83313.t1 MTR_5g025610 29.958 474 306 11 10 477 7 460 4.88e-67 223
MS.gene83313.t1 MTR_2g031930 29.673 428 281 8 40 456 45 463 1.73e-65 219
MS.gene83313.t1 MTR_2g031920 29.231 455 295 10 40 479 41 483 2.31e-65 219
MS.gene83313.t1 MTR_2g031930 29.717 424 278 8 40 452 41 455 4.08e-65 217
MS.gene83313.t1 MTR_5g025610 29.867 452 292 10 10 456 7 438 1.11e-64 216
MS.gene83313.t1 MTR_8g072260 29.978 447 289 11 40 480 37 465 6.81e-64 214
MS.gene83313.t1 MTR_0045s0060 28.696 460 305 10 30 479 30 476 7.68e-63 212
MS.gene83313.t1 MTR_4g086130 31.818 440 268 11 28 454 21 441 2.25e-61 208
MS.gene83313.t1 MTR_1g019410 29.139 453 300 8 7 452 2 440 3.30e-61 208
MS.gene83313.t1 MTR_8g072260 30.144 418 269 10 40 452 37 436 4.46e-61 207
MS.gene83313.t1 MTR_5g014250 26.829 492 306 15 9 468 9 478 4.19e-57 197
MS.gene83313.t1 MTR_1g037580 31.096 447 287 9 13 454 19 449 4.70e-57 197
MS.gene83313.t1 MTR_6g034940 28.450 471 293 14 10 459 12 459 1.72e-55 192
MS.gene83313.t1 MTR_5g091760 28.112 466 313 7 5 459 1 455 3.51e-55 192
MS.gene83313.t1 MTR_0045s0060 27.833 406 276 7 79 479 1 394 1.17e-54 188
MS.gene83313.t1 MTR_5g092150 26.464 461 317 7 32 480 21 471 1.77e-54 190
MS.gene83313.t1 MTR_4g086040 29.481 424 275 10 39 454 37 444 3.56e-53 186
MS.gene83313.t1 MTR_5g025610 29.073 399 266 8 10 403 7 393 5.91e-53 184
MS.gene83313.t1 MTR_4g005230 29.011 455 291 15 40 479 43 480 8.21e-53 186
MS.gene83313.t1 MTR_0045s0070 26.030 461 316 9 30 479 30 476 3.19e-52 184
MS.gene83313.t1 MTR_0045s0070 26.790 433 293 8 30 452 30 448 1.61e-50 178
MS.gene83313.t1 MTR_1g032950 26.222 450 300 13 40 479 43 470 3.10e-50 178
MS.gene83313.t1 MTR_5g014240 28.081 495 314 18 9 479 9 485 6.94e-50 177
MS.gene83313.t1 MTR_8g100135 26.027 438 304 7 33 459 27 455 7.26e-50 177
MS.gene83313.t1 MTR_8g072260 28.997 369 247 8 40 403 37 395 1.62e-49 176
MS.gene83313.t1 MTR_8g012970 26.620 432 287 12 40 456 45 461 4.01e-49 176
MS.gene83313.t1 MTR_8g076940 26.386 451 309 9 13 453 19 456 6.45e-48 172
MS.gene83313.t1 MTR_7g016040 29.787 329 223 4 40 366 33 355 1.74e-46 166
MS.gene83313.t1 MTR_3g112120 24.625 467 320 11 9 459 11 461 3.57e-46 167
MS.gene83313.t1 MTR_8g089190 26.484 438 290 10 40 460 1 423 4.48e-46 166
MS.gene83313.t1 MTR_3g467130 25.866 433 298 7 37 456 30 452 3.42e-45 165
MS.gene83313.t1 MTR_3g467140 26.782 463 306 12 10 456 7 452 2.35e-44 162
MS.gene83313.t1 MTR_8g076940 26.000 400 283 7 13 403 19 414 6.08e-39 146
MS.gene83313.t1 MTR_0045s0080 24.740 384 267 8 30 403 30 401 2.72e-37 142
MS.gene83313.t1 MTR_8g100135 25.485 361 256 6 33 382 27 385 7.69e-35 135
MS.gene83313.t1 MTR_8g076940 26.039 361 254 7 13 364 19 375 4.97e-33 129
MS.gene83313.t1 MTR_8g076940 26.039 361 254 7 13 364 19 375 6.52e-33 129
MS.gene83313.t1 MTR_8g089190 25.779 353 236 9 40 375 1 344 1.86e-31 124
MS.gene83313.t1 MTR_1g032980 25.685 292 204 7 40 320 16 305 1.29e-29 120
MS.gene83313.t1 MTR_3g467140 28.846 312 196 9 158 456 21 319 5.93e-28 114
MS.gene83313.t1 MTR_5g007550 24.738 477 313 16 4 454 8 464 3.35e-27 114
MS.gene83313.t1 MTR_5g007450 24.628 471 309 15 10 454 14 464 2.86e-26 112
MS.gene83313.t1 MTR_1g037370 24.777 448 289 16 39 454 30 461 1.67e-22 100
MS.gene83313.t1 MTR_5g094570 21.980 505 340 16 10 482 10 492 3.72e-21 96.7
MS.gene83313.t1 MTR_5g072980 23.163 449 299 13 40 454 33 469 6.30e-21 95.9
MS.gene83313.t1 MTR_5g072930 23.163 449 299 13 40 454 33 469 6.30e-21 95.9
MS.gene83313.t1 MTR_7g096340 22.708 480 310 20 45 480 40 502 6.30e-21 95.9
MS.gene83313.t1 MTR_5g094550 21.639 476 324 14 10 454 10 467 2.27e-20 94.4
MS.gene83313.t1 MTR_3g057910 23.625 491 316 19 29 482 27 495 4.02e-20 93.6
MS.gene83313.t1 MTR_5g007460 24.561 456 292 18 35 454 4 443 4.65e-20 93.2
MS.gene83313.t1 MTR_0181s0030 21.830 481 324 15 9 454 6 469 5.51e-20 93.2
MS.gene83313.t1 MTR_7g075610 21.458 480 327 15 11 454 5 470 6.20e-20 92.8
MS.gene83313.t1 MTR_5g073230 21.800 500 301 18 27 482 28 481 9.05e-20 92.4
MS.gene83313.t1 MTR_1g035140 22.708 480 325 13 6 454 3 467 1.17e-19 92.0
MS.gene83313.t1 MTR_5g019010 24.652 503 326 21 15 477 9 498 1.27e-19 92.0
MS.gene83313.t1 MTR_5g094560 21.457 508 339 18 10 482 10 492 1.57e-19 91.7
MS.gene83313.t1 MTR_4g133750 24.628 471 313 15 12 454 14 470 2.31e-19 91.3
MS.gene83313.t1 MTR_8g046240 22.407 482 327 16 6 454 6 473 3.07e-19 90.9
MS.gene83313.t1 MTR_4g095050 22.892 498 301 18 13 461 8 471 3.45e-19 90.9
MS.gene83313.t1 MTR_4g029690 24.042 287 196 10 40 312 43 321 3.51e-19 89.0
MS.gene83313.t1 MTR_5g094520 22.465 503 340 17 10 482 41 523 4.33e-19 90.5
MS.gene83313.t1 MTR_4g102310 22.595 447 299 15 40 453 39 471 5.64e-19 90.1
MS.gene83313.t1 MTR_1g031700 22.601 469 323 14 14 454 8 464 6.08e-19 89.7
MS.gene83313.t1 MTR_7g079440 21.845 412 289 10 71 454 213 619 6.50e-19 90.5
MS.gene83313.t1 MTR_1g492820 21.895 475 324 15 13 453 22 483 6.87e-19 89.7
MS.gene83313.t1 MTR_5g016440 22.358 492 325 16 13 467 6 477 1.70e-18 88.6
MS.gene83313.t1 MTR_5g094540 22.445 499 340 17 13 477 10 495 2.00e-18 88.2
MS.gene83313.t1 MTR_3g057980 22.388 469 325 12 15 454 5 463 2.47e-18 88.2
MS.gene83313.t1 MTR_3g057900 20.623 514 337 16 13 482 3 489 3.25e-18 87.8
MS.gene83313.t1 MTR_3g057970 20.339 472 330 13 13 454 3 458 3.63e-18 87.4
MS.gene83313.t1 MTR_4g048580 21.962 469 324 14 41 482 39 492 1.03e-17 86.3
MS.gene83313.t1 MTR_8g046210 22.500 480 329 14 6 454 6 473 1.55e-17 85.5
MS.gene83313.t1 MTR_5g021390 24.138 493 310 20 3 454 11 480 1.70e-17 85.5
MS.gene83313.t1 MTR_5g073020 22.511 462 286 16 40 454 33 469 1.80e-17 85.5
MS.gene83313.t1 MTR_5g073320 22.553 470 321 16 40 477 38 496 1.88e-17 85.5
MS.gene83313.t1 MTR_5g016410 22.549 510 323 19 9 477 5 483 1.90e-17 85.1
MS.gene83313.t1 MTR_2g073480 25.263 285 197 8 183 460 111 386 2.01e-17 84.7
MS.gene83313.t1 MTR_4g025970 24.222 450 296 14 38 454 27 464 2.50e-17 84.7
MS.gene83313.t1 MTR_0171s0010 29.146 199 131 4 257 454 288 477 3.31e-17 84.7
MS.gene83313.t1 MTR_2g073440 25.263 285 197 8 183 460 178 453 3.88e-17 84.3
MS.gene83313.t1 MTR_1g101040 24.581 358 241 11 118 454 138 487 4.34e-17 84.3
MS.gene83313.t1 MTR_3g058210 22.899 476 306 18 20 454 15 470 4.90e-17 84.0
MS.gene83313.t1 MTR_5g095220 22.624 442 283 15 40 454 28 437 5.53e-17 83.6
MS.gene83313.t1 MTR_4g109470 26.724 232 156 5 233 454 243 470 6.49e-17 83.6
MS.gene83313.t1 MTR_8g063280 21.730 474 334 11 8 454 4 467 8.64e-17 83.2
MS.gene83313.t1 MTR_5g045250 28.444 225 147 6 237 453 268 486 1.03e-16 83.2
MS.gene83313.t1 MTR_0171s0020 23.760 484 310 18 14 454 8 475 1.06e-16 83.2
MS.gene83313.t1 MTR_4g094772 24.324 481 280 21 25 461 18 458 2.58e-16 81.6
MS.gene83313.t1 MTR_1g103670 20.704 483 328 16 5 454 4 464 3.52e-16 81.3
MS.gene83313.t1 MTR_4g071710 24.664 223 155 5 233 454 270 480 3.65e-16 81.3
MS.gene83313.t1 MTR_7g012860 21.778 450 310 13 36 454 29 467 5.78e-16 80.9
MS.gene83313.t1 MTR_0287s0060 21.778 450 310 13 36 454 29 467 5.78e-16 80.9
MS.gene83313.t1 MTR_5g095290 22.432 477 313 16 16 454 10 467 9.80e-16 80.1
MS.gene83313.t1 MTR_3g057860 22.581 465 314 16 11 442 8 459 1.06e-15 79.7
MS.gene83313.t1 MTR_0147s0030 25.337 371 215 15 120 452 155 501 1.44e-15 79.7
MS.gene83313.t1 MTR_2g073420 29.098 244 154 8 220 454 242 475 1.48e-15 79.3
MS.gene83313.t1 MTR_1g055325 28.226 248 163 7 220 460 252 491 1.62e-15 79.3
MS.gene83313.t1 MTR_5g018980 31.980 197 116 7 262 447 281 470 1.90e-15 79.0
MS.gene83313.t1 MTR_4g062510 25.543 184 134 2 277 459 307 488 3.13e-15 78.6
MS.gene83313.t1 MTR_8g008530 25.243 412 262 17 74 453 93 490 5.08e-15 77.8
MS.gene83313.t1 MTR_8g020960 21.138 492 313 17 9 454 11 473 5.34e-15 77.8
MS.gene83313.t1 MTR_5g094520 26.852 216 141 6 272 482 215 418 5.68e-15 77.4
MS.gene83313.t1 MTR_8g012590 27.632 228 153 5 262 480 274 498 6.48e-15 77.4
MS.gene83313.t1 MTR_2g437840 21.989 523 312 20 10 476 5 487 6.90e-15 77.4
MS.gene83313.t1 MTR_3g051230 30.579 121 84 0 17 137 3 123 7.12e-15 72.8
MS.gene83313.t1 MTR_5g045770 23.438 448 301 12 38 454 27 463 7.69e-15 77.0
MS.gene83313.t1 MTR_4g102280 22.038 422 274 15 72 453 71 477 8.15e-15 77.0
MS.gene83313.t1 MTR_6g008640 22.052 458 296 18 41 447 40 487 1.09e-14 76.6
MS.gene83313.t1 MTR_8g036185 26.486 185 127 2 277 454 303 485 1.09e-14 76.6
MS.gene83313.t1 MTR_5g095260 22.004 459 303 14 30 454 31 468 1.32e-14 76.6
MS.gene83313.t1 MTR_3g025260 22.275 422 286 12 65 447 52 470 1.63e-14 76.3
MS.gene83313.t1 MTR_8g468780 23.592 284 198 6 179 453 131 404 1.68e-14 75.9
MS.gene83313.t1 MTR_4g026200 27.053 207 138 6 281 480 294 494 2.57e-14 75.5
MS.gene83313.t1 MTR_6g034965 24.051 474 313 17 12 454 9 466 4.08e-14 75.1
MS.gene83313.t1 MTR_1g091010 23.347 484 307 21 8 454 5 461 4.10e-14 74.7
MS.gene83313.t1 MTR_2g437880 27.354 223 145 6 245 461 261 472 4.53e-14 74.7
MS.gene83313.t1 MTR_1g091023 22.892 498 288 23 10 454 8 462 5.60e-14 74.3
MS.gene83313.t1 MTR_1g015860 26.316 190 135 3 267 455 314 499 8.77e-14 73.9
MS.gene83313.t1 MTR_4g026050 22.472 445 303 12 41 454 30 463 1.18e-13 73.6
MS.gene83313.t1 MTR_7g029275 20.508 512 340 20 16 480 17 508 1.41e-13 73.2
MS.gene83313.t1 MTR_4g088400 23.841 453 289 22 39 447 44 484 1.52e-13 73.2
MS.gene83313.t1 MTR_7g055793 22.494 409 273 13 74 452 45 439 1.55e-13 73.2
MS.gene83313.t1 MTR_7g055793 22.494 409 273 13 74 452 100 494 1.71e-13 73.2
MS.gene83313.t1 MTR_4g077210 21.780 427 295 13 69 463 59 478 1.83e-13 72.8
MS.gene83313.t1 MTR_7g079440 20.833 360 255 8 71 403 213 569 1.94e-13 73.2
MS.gene83313.t1 MTR_0025s0110 22.983 409 276 12 74 454 101 498 2.58e-13 72.4
MS.gene83313.t1 MTR_5g014230 38.554 83 43 3 387 468 1 76 2.67e-13 66.6
MS.gene83313.t1 MTR_8g076290 22.042 431 285 16 41 434 36 452 2.88e-13 72.4
MS.gene83313.t1 MTR_4g089020 22.072 444 306 13 39 454 29 460 2.92e-13 72.4
MS.gene83313.t1 MTR_8g469300 27.957 186 130 3 269 453 291 473 2.94e-13 72.4
MS.gene83313.t1 MTR_5g019140 21.811 541 324 21 10 480 19 530 3.14e-13 72.4
MS.gene83313.t1 MTR_8g098565 26.178 191 135 4 272 457 289 478 3.35e-13 72.0
MS.gene83313.t1 MTR_8g035760 24.088 411 262 20 90 460 88 488 3.83e-13 72.0
MS.gene83313.t1 MTR_2g010380 26.702 191 135 4 268 454 290 479 3.89e-13 72.0
MS.gene83313.t1 MTR_4g062500 25.543 184 134 2 277 459 303 484 4.31e-13 71.6
MS.gene83313.t1 MTR_3g020780 19.215 484 341 11 9 454 7 478 4.64e-13 71.6
MS.gene83313.t1 MTR_1g103680 23.251 486 312 16 14 463 17 477 5.09e-13 71.6
MS.gene83313.t1 MTR_2g010250 25.131 191 138 3 268 454 286 475 5.63e-13 71.2
MS.gene83313.t1 MTR_2g061200 26.257 179 128 2 277 454 326 501 6.76e-13 71.2
MS.gene83313.t1 MTR_5g023680 23.111 450 296 11 40 454 5 439 7.53e-13 70.9
MS.gene83313.t1 MTR_2g010290 25.381 197 130 4 268 454 313 502 7.75e-13 70.9
MS.gene83313.t1 MTR_7g075540 26.882 186 128 4 270 453 287 466 8.62e-13 70.9
MS.gene83313.t1 MTR_2g010320 25.000 192 139 3 267 454 283 473 9.11e-13 70.9
MS.gene83313.t1 MTR_1g107295 25.137 183 133 2 277 459 308 486 1.73e-12 70.1
MS.gene83313.t1 MTR_3g058390 23.256 473 314 15 16 454 11 468 1.78e-12 69.7
MS.gene83313.t1 MTR_2g105360 22.961 466 281 18 39 454 32 469 1.92e-12 69.7
MS.gene83313.t1 MTR_5g094510 27.397 219 121 7 269 482 47 232 2.13e-12 67.8
MS.gene83313.t1 MTR_1g101050 25.403 248 165 6 221 454 242 483 2.16e-12 69.7
MS.gene83313.t1 MTR_8g080520 23.348 227 162 5 233 453 275 495 2.28e-12 69.7
MS.gene83313.t1 MTR_1g107300 25.581 172 124 2 288 459 7 174 2.38e-12 66.6
MS.gene83313.t1 MTR_1g085680 22.248 436 284 19 58 453 67 487 2.59e-12 69.3
MS.gene83313.t1 MTR_5g018500 28.283 198 130 6 296 484 1 195 3.39e-12 65.9
MS.gene83313.t1 MTR_4g088425 24.099 444 285 22 41 447 40 468 3.92e-12 68.9
MS.gene83313.t1 MTR_4g119660 21.442 541 326 22 10 480 4 515 4.37e-12 68.6
MS.gene83313.t1 MTR_3g014880 21.643 499 314 20 10 447 8 490 5.97e-12 68.2
MS.gene83313.t1 MTR_3g025230 25.000 180 131 3 277 454 296 473 7.23e-12 67.8
MS.gene83313.t1 MTR_1g097220 24.757 206 149 4 262 463 304 507 7.41e-12 67.8
MS.gene83313.t1 MTR_1g090987 32.800 125 77 4 332 454 31 150 1.03e-11 63.9
MS.gene83313.t1 MTR_6g008430 21.336 464 294 20 38 447 36 482 1.11e-11 67.4
MS.gene83313.t1 MTR_7g028020 20.690 406 288 11 70 444 57 459 1.40e-11 67.0
MS.gene83313.t1 MTR_8g035680 22.330 412 269 17 90 460 88 489 1.57e-11 67.0
MS.gene83313.t1 MTR_5g009110 26.471 204 121 7 274 451 190 390 1.58e-11 66.6
MS.gene83313.t1 MTR_8g104100 24.186 215 146 5 242 454 29 228 1.85e-11 65.1
MS.gene83313.t1 MTR_5g009110 26.471 204 121 7 274 451 338 538 2.18e-11 66.6
MS.gene83313.t1 MTR_3g080580 20.886 474 318 18 54 483 60 520 2.82e-11 66.2
MS.gene83313.t1 MTR_7g027960 21.602 412 277 13 70 444 57 459 3.00e-11 65.9
MS.gene83313.t1 MTR_8g469360 23.161 367 230 14 120 453 48 395 5.11e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83313.t1 AT1G73340 70.146 479 130 3 6 483 17 483 0.0 721
MS.gene83313.t1 AT3G50660 32.577 485 290 5 30 479 29 511 2.15e-104 321
MS.gene83313.t1 AT5G05690 34.459 444 282 4 40 480 31 468 3.00e-98 304
MS.gene83313.t1 AT3G13730 32.889 450 284 7 39 479 50 490 6.09e-97 301
MS.gene83313.t1 AT4G36380 33.040 454 287 7 40 483 69 515 6.71e-94 295
MS.gene83313.t1 AT3G13730 33.333 423 265 6 39 452 50 464 9.69e-94 292
MS.gene83313.t1 AT5G14400 35.613 424 236 8 46 461 2 396 6.52e-88 276
MS.gene83313.t1 AT3G50660 32.673 404 244 3 30 405 29 432 3.59e-87 275
MS.gene83313.t1 AT5G14400 35.096 416 234 7 46 453 2 389 2.27e-85 268
MS.gene83313.t1 AT1G12740 31.441 458 299 5 32 482 23 472 2.02e-83 266
MS.gene83313.t1 AT1G12740 31.169 462 301 6 32 482 23 478 2.85e-81 260
MS.gene83313.t1 AT1G12740 31.250 464 298 6 32 482 23 478 3.46e-81 260
MS.gene83313.t1 AT3G30180 30.786 471 301 7 10 475 10 460 6.84e-81 259
MS.gene83313.t1 AT5G05690 34.048 373 241 3 40 409 31 401 1.92e-78 251
MS.gene83313.t1 AT5G38970 30.998 471 300 8 10 475 10 460 3.66e-77 249
MS.gene83313.t1 AT4G19230 29.645 479 310 10 12 480 1 462 1.03e-72 238
MS.gene83313.t1 AT5G14400 35.135 370 203 8 100 461 2 342 5.85e-72 233
MS.gene83313.t1 AT5G45340 29.167 480 318 10 4 480 2 462 1.51e-71 234
MS.gene83313.t1 AT4G19230 29.935 461 297 9 12 463 1 444 2.41e-71 234
MS.gene83313.t1 AT5G45340 29.004 462 307 9 4 463 2 444 2.51e-69 228
MS.gene83313.t1 AT3G19270 29.258 458 297 10 5 454 1 439 5.71e-69 228
MS.gene83313.t1 AT3G19270 29.295 454 300 9 5 453 1 438 4.65e-68 225
MS.gene83313.t1 AT5G05690 31.268 355 235 4 129 480 1 349 7.28e-66 216
MS.gene83313.t1 AT5G38970 30.769 390 256 4 94 478 2 382 7.90e-66 217
MS.gene83313.t1 AT5G38970 30.769 390 256 4 94 478 2 382 7.90e-66 217
MS.gene83313.t1 AT5G14400 34.043 329 208 4 46 367 2 328 1.53e-64 212
MS.gene83313.t1 AT2G29090 28.188 447 300 8 39 478 48 480 1.80e-63 214
MS.gene83313.t1 AT2G29090 28.188 447 300 8 39 478 48 480 1.80e-63 214
MS.gene83313.t1 AT1G55940 25.820 488 343 8 5 479 10 491 7.60e-62 210
MS.gene83313.t1 AT1G55940 26.522 460 319 8 5 451 10 463 2.47e-61 207
MS.gene83313.t1 AT4G36380 30.769 338 224 3 40 368 69 405 1.31e-60 205
MS.gene83313.t1 AT2G32440 28.105 459 305 10 9 452 10 458 7.47e-60 204
MS.gene83313.t1 AT2G32440 28.105 459 305 10 9 452 10 458 7.47e-60 204
MS.gene83313.t1 AT3G44970 28.571 455 306 7 35 479 30 475 7.97e-58 199
MS.gene83313.t1 AT5G38970 29.250 400 264 6 10 404 10 395 1.35e-57 196
MS.gene83313.t1 AT1G05160 26.190 462 315 10 34 479 35 486 3.95e-57 197
MS.gene83313.t1 AT1G05160 26.190 462 315 10 34 479 35 486 3.95e-57 197
MS.gene83313.t1 AT4G15300 27.009 448 311 9 10 453 8 443 5.78e-56 194
MS.gene83313.t1 AT1G19630 26.752 471 321 10 22 480 17 475 6.16e-56 194
MS.gene83313.t1 AT1G65670 26.786 448 306 9 13 453 7 439 1.64e-55 192
MS.gene83313.t1 AT4G15300 26.966 445 309 9 13 453 1 433 2.84e-55 192
MS.gene83313.t1 AT4G15393 26.407 462 316 10 12 461 1 450 1.34e-54 190
MS.gene83313.t1 AT4G15396 25.966 466 321 9 4 461 3 452 1.46e-54 190
MS.gene83313.t1 AT2G29090 27.481 393 268 7 93 478 3 385 1.30e-53 185
MS.gene83313.t1 AT1G12740 29.240 342 236 4 35 371 26 366 3.53e-53 183
MS.gene83313.t1 AT4G15396 25.983 458 315 9 4 453 3 444 7.06e-53 185
MS.gene83313.t1 AT5G36110 27.626 438 297 8 29 456 23 450 1.16e-52 185
MS.gene83313.t1 AT1G19630 26.185 443 309 8 22 456 17 449 7.60e-52 182
MS.gene83313.t1 AT2G42850 28.738 428 286 7 40 459 45 461 2.00e-51 182
MS.gene83313.t1 AT1G78490 28.176 433 300 8 35 461 30 457 1.56e-50 179
MS.gene83313.t1 AT5G48000 27.093 454 308 9 38 479 33 475 5.54e-50 178
MS.gene83313.t1 AT5G48000 27.093 454 308 9 38 479 33 475 5.54e-50 178
MS.gene83313.t1 AT5G48000 27.093 454 308 9 38 479 33 475 5.54e-50 178
MS.gene83313.t1 AT5G48000 27.093 454 308 9 38 479 33 475 5.54e-50 178
MS.gene83313.t1 AT5G48000 27.093 454 308 9 38 479 33 475 5.54e-50 178
MS.gene83313.t1 AT5G48000 27.093 454 308 9 38 479 33 475 5.54e-50 178
MS.gene83313.t1 AT5G48000 27.133 457 310 9 35 479 71 516 1.72e-49 177
MS.gene83313.t1 AT4G15396 24.893 466 305 9 4 461 3 431 5.18e-48 172
MS.gene83313.t1 AT4G15300 25.696 467 309 11 13 453 1 455 1.63e-47 171
MS.gene83313.t1 AT4G15310 27.473 455 304 12 11 453 6 446 6.62e-45 164
MS.gene83313.t1 AT3G30290 26.992 389 263 8 78 458 3 378 4.04e-43 157
MS.gene83313.t1 AT4G15396 25.000 408 287 7 4 403 3 399 5.49e-43 157
MS.gene83313.t1 AT4G15393 25.248 404 283 8 12 403 1 397 7.45e-43 157
MS.gene83313.t1 AT1G19630 24.872 390 283 6 22 403 17 404 2.17e-41 153
MS.gene83313.t1 AT1G78490 26.400 375 270 5 35 403 30 404 3.61e-38 144
MS.gene83313.t1 AT4G15393 24.257 404 254 8 12 403 1 364 1.90e-36 138
MS.gene83313.t1 AT2G42850 29.070 344 233 6 40 375 45 385 4.42e-36 138
MS.gene83313.t1 AT5G36110 26.611 357 249 6 29 375 23 376 5.71e-36 137
MS.gene83313.t1 AT2G29090 25.899 278 198 4 39 313 48 320 1.29e-29 119
MS.gene83313.t1 AT5G36140 25.263 285 198 4 40 315 33 311 3.00e-27 112
MS.gene83313.t1 AT3G44970 23.824 319 229 5 35 343 30 344 4.61e-23 100
MS.gene83313.t1 AT3G10560 24.043 470 317 16 17 453 18 480 5.57e-23 102
MS.gene83313.t1 AT1G74550 24.043 470 305 16 12 453 3 448 7.66e-23 101
MS.gene83313.t1 AT2G45550 21.593 477 330 11 11 454 9 474 2.78e-22 100
MS.gene83313.t1 AT4G37430 23.200 500 319 17 12 469 1 477 4.84e-21 96.3
MS.gene83313.t1 AT5G57220 23.529 476 308 19 13 456 4 455 8.45e-21 95.5
MS.gene83313.t1 AT2G45560 20.971 453 310 14 40 457 38 477 1.28e-19 92.0
MS.gene83313.t1 AT4G37400 24.286 420 283 13 65 456 49 461 1.92e-19 91.7
MS.gene83313.t1 AT5G04630 21.519 474 336 13 11 453 8 476 3.78e-19 90.5
MS.gene83313.t1 AT4G37410 23.601 411 277 13 76 458 62 463 7.03e-19 89.7
MS.gene83313.t1 AT4G37370 26.429 280 176 10 195 459 198 462 1.47e-18 88.6
MS.gene83313.t1 AT1G74540 28.218 202 134 5 257 453 259 454 3.08e-18 87.8
MS.gene83313.t1 AT5G67310 23.013 478 314 17 10 455 15 470 4.30e-18 87.4
MS.gene83313.t1 AT1G31800 20.588 442 313 13 71 480 134 569 5.35e-18 87.4
MS.gene83313.t1 AT2G45580 27.660 188 127 4 269 454 141 321 7.52e-18 85.5
MS.gene83313.t1 AT5G07990 23.207 474 326 13 11 454 4 469 8.22e-18 86.7
MS.gene83313.t1 AT2G28860 20.190 421 301 13 84 480 79 488 9.52e-18 86.3
MS.gene83313.t1 AT2G45580 27.660 188 127 4 269 454 295 475 1.39e-17 85.9
MS.gene83313.t1 AT2G34490 22.716 405 245 14 118 480 114 492 1.41e-17 85.9
MS.gene83313.t1 AT3G28740 22.717 427 275 14 77 468 74 480 1.52e-17 85.9
MS.gene83313.t1 AT2G45570 21.176 425 295 9 64 454 57 475 2.75e-17 84.7
MS.gene83313.t1 AT3G48520 22.568 514 331 21 10 480 10 499 3.00e-17 84.7
MS.gene83313.t1 AT4G15380 27.632 228 155 4 236 458 256 478 3.78e-17 84.3
MS.gene83313.t1 AT1G11600 21.333 450 312 15 40 453 35 478 4.58e-17 84.3
MS.gene83313.t1 AT1G33730 28.042 189 128 4 268 454 156 338 1.25e-16 82.0
MS.gene83313.t1 AT1G33730 28.042 189 128 4 268 454 156 338 1.25e-16 82.0
MS.gene83313.t1 AT3G26270 23.404 470 307 20 26 458 20 473 1.37e-16 82.8
MS.gene83313.t1 AT1G11680 22.907 454 321 12 14 451 14 454 1.52e-16 82.4
MS.gene83313.t1 AT3G20950 21.063 489 321 14 11 454 14 482 1.98e-16 82.4
MS.gene83313.t1 AT2G40890 21.784 482 319 17 8 453 2 461 2.10e-16 82.0
MS.gene83313.t1 AT2G28850 19.906 427 295 13 84 480 79 488 3.16e-16 81.6
MS.gene83313.t1 AT4G37360 28.342 187 123 4 274 459 287 463 3.16e-16 81.6
MS.gene83313.t1 AT2G26710 22.424 495 326 17 3 451 2 484 3.91e-16 81.3
MS.gene83313.t1 AT3G25180 22.658 459 289 13 72 482 68 508 4.95e-16 80.9
MS.gene83313.t1 AT4G12300 21.946 483 310 16 15 454 20 478 5.38e-16 80.9
MS.gene83313.t1 AT4G13770 20.485 454 321 11 14 436 4 448 7.25e-16 80.5
MS.gene83313.t1 AT5G25140 19.876 483 324 14 9 454 4 460 8.82e-16 80.1
MS.gene83313.t1 AT3G26170 30.570 193 120 6 269 454 283 468 1.15e-15 79.7
MS.gene83313.t1 AT3G26180 26.667 255 153 9 203 454 111 334 1.33e-15 79.0
MS.gene83313.t1 AT5G25180 22.851 477 295 17 22 454 13 460 1.66e-15 79.3
MS.gene83313.t1 AT3G48300 21.030 466 307 20 29 459 19 458 1.82e-15 79.0
MS.gene83313.t1 AT2G42250 27.473 182 125 3 280 456 303 482 1.83e-15 79.3
MS.gene83313.t1 AT3G48300 21.030 466 307 20 29 459 21 460 1.84e-15 79.0
MS.gene83313.t1 AT4G37310 20.412 485 329 13 11 455 4 471 1.95e-15 79.3
MS.gene83313.t1 AT3G48320 22.869 481 299 21 10 454 12 456 2.15e-15 79.0
MS.gene83313.t1 AT1G66540 25.654 191 131 4 274 463 115 295 2.22e-15 77.8
MS.gene83313.t1 AT3G26230 29.474 190 124 4 275 460 289 472 3.01e-15 78.6
MS.gene83313.t1 AT1G66540 25.654 191 131 4 274 463 174 354 3.66e-15 77.4
MS.gene83313.t1 AT1G33720 20.961 458 320 9 29 454 27 474 3.96e-15 78.2
MS.gene83313.t1 AT3G48280 20.356 506 332 22 10 475 1 475 4.20e-15 78.2
MS.gene83313.t1 AT1G33720 26.596 188 132 3 268 454 160 342 9.24e-15 76.3
MS.gene83313.t1 AT1G33720 26.596 188 132 3 268 454 160 342 9.24e-15 76.3
MS.gene83313.t1 AT1G33720 26.596 188 132 3 268 454 160 342 9.24e-15 76.3
MS.gene83313.t1 AT3G26180 26.772 254 152 9 204 454 246 468 1.21e-14 76.6
MS.gene83313.t1 AT5G10600 27.320 194 133 3 274 466 302 488 1.38e-14 76.6
MS.gene83313.t1 AT5G04330 27.933 179 118 4 275 447 295 468 1.48e-14 76.3
MS.gene83313.t1 AT4G36220 26.087 184 130 3 272 454 304 482 1.80e-14 76.3
MS.gene83313.t1 AT5G36130 30.496 141 89 3 337 475 1 134 1.97e-14 70.9
MS.gene83313.t1 AT3G10570 20.048 419 297 11 67 453 68 480 2.27e-14 75.9
MS.gene83313.t1 AT5G35715 25.912 274 180 9 190 447 134 400 2.38e-14 75.5
MS.gene83313.t1 AT5G04660 21.053 418 295 10 67 453 66 479 2.65e-14 75.5
MS.gene83313.t1 AT5G25120 19.792 480 328 16 9 454 4 460 2.76e-14 75.5
MS.gene83313.t1 AT4G15360 26.203 187 132 4 277 462 301 482 3.28e-14 75.5
MS.gene83313.t1 AT5G10610 27.638 199 136 4 268 465 280 471 3.91e-14 75.1
MS.gene83313.t1 AT5G09970 25.551 227 158 5 237 455 283 506 4.24e-14 75.1
MS.gene83313.t1 AT3G01900 21.133 459 310 17 54 480 52 490 4.54e-14 74.7
MS.gene83313.t1 AT3G26150 30.601 183 118 5 275 454 292 468 7.24e-14 74.3
MS.gene83313.t1 AT3G20090 25.134 187 137 2 269 454 157 341 7.45e-14 73.6
MS.gene83313.t1 AT4G31950 32.759 174 104 6 282 447 304 472 8.25e-14 73.9
MS.gene83313.t1 AT3G20120 22.995 187 140 2 269 453 156 340 8.59e-14 73.2
MS.gene83313.t1 AT3G20120 22.995 187 140 2 269 453 156 340 8.59e-14 73.2
MS.gene83313.t1 AT3G20120 22.995 187 140 2 269 453 156 340 8.59e-14 73.2
MS.gene83313.t1 AT3G20080 25.926 189 135 3 277 463 165 350 1.01e-13 73.2
MS.gene83313.t1 AT3G20080 25.926 189 135 3 277 463 165 350 1.01e-13 73.2
MS.gene83313.t1 AT3G20080 25.926 189 135 3 277 463 165 350 1.01e-13 73.2
MS.gene83313.t1 AT3G20080 25.926 189 135 3 277 463 165 350 1.01e-13 73.2
MS.gene83313.t1 AT5G42580 25.000 180 131 2 277 454 286 463 1.12e-13 73.6
MS.gene83313.t1 AT4G31940 30.366 191 122 6 264 447 298 484 1.19e-13 73.6
MS.gene83313.t1 AT2G14100 24.731 186 138 1 269 454 294 477 1.38e-13 73.6
MS.gene83313.t1 AT3G20935 26.012 173 124 2 284 454 134 304 1.69e-13 72.0
MS.gene83313.t1 AT3G20120 23.077 195 145 3 269 461 292 483 2.02e-13 72.8
MS.gene83313.t1 AT3G32047 23.618 199 149 2 269 467 292 487 2.04e-13 72.8
MS.gene83313.t1 AT3G48310 20.645 465 307 18 29 458 23 460 2.15e-13 72.8
MS.gene83313.t1 AT3G20090 25.134 187 137 2 269 454 295 479 2.16e-13 72.8
MS.gene83313.t1 AT3G20960 24.324 222 159 4 236 453 157 373 2.31e-13 72.4
MS.gene83313.t1 AT5G06905 19.748 476 328 13 40 473 31 494 2.39e-13 72.8
MS.gene83313.t1 AT3G20080 26.064 188 134 3 277 462 302 486 2.51e-13 72.8
MS.gene83313.t1 AT3G20080 26.064 188 134 3 277 462 302 486 2.51e-13 72.8
MS.gene83313.t1 AT2G30770 23.312 459 280 16 40 454 33 463 2.82e-13 72.4
MS.gene83313.t1 AT3G20960 24.324 222 159 4 236 453 260 476 3.34e-13 72.0
MS.gene83313.t1 AT1G24540 21.136 440 297 15 86 480 86 520 4.64e-13 71.6
MS.gene83313.t1 AT5G24900 27.841 176 120 3 277 451 210 379 4.99e-13 71.2
MS.gene83313.t1 AT4G37330 27.411 197 126 5 267 459 277 460 5.04e-13 71.6
MS.gene83313.t1 AT3G26160 29.697 165 107 5 275 436 292 450 7.97e-13 70.9
MS.gene83313.t1 AT5G24900 27.841 176 120 3 277 451 327 496 9.21e-13 70.9
MS.gene83313.t1 AT1G13080 24.503 302 184 11 180 453 64 349 1.07e-12 70.1
MS.gene83313.t1 AT5G24910 27.273 176 121 3 277 451 332 501 1.12e-12 70.5
MS.gene83313.t1 AT3G20940 23.333 180 134 2 277 454 302 479 1.13e-12 70.5
MS.gene83313.t1 AT2G46950 22.963 405 277 12 93 469 166 563 1.75e-12 70.1
MS.gene83313.t1 AT1G13110 21.926 488 315 20 11 453 3 469 1.77e-12 69.7
MS.gene83313.t1 AT1G64930 25.907 193 137 3 268 457 292 481 2.05e-12 69.7
MS.gene83313.t1 AT3G56630 20.563 462 289 19 43 449 30 468 2.58e-12 69.3
MS.gene83313.t1 AT1G13080 24.503 302 184 11 180 453 182 467 3.30e-12 68.9
MS.gene83313.t1 AT1G13090 26.776 183 123 5 275 453 288 463 5.04e-12 68.6
MS.gene83313.t1 AT3G26830 25.000 204 137 6 275 474 288 479 5.18e-12 68.6
MS.gene83313.t1 AT1G28430 23.661 224 164 3 236 454 255 476 5.97e-12 68.2
MS.gene83313.t1 AT2G23190 26.804 194 129 5 268 459 325 507 7.53e-12 68.2
MS.gene83313.t1 AT1G75130 23.041 434 284 14 76 479 89 502 1.41e-11 67.0
MS.gene83313.t1 AT2G12190 23.438 256 177 5 238 481 252 500 2.97e-11 66.2
MS.gene83313.t1 AT2G25160 25.758 198 132 6 262 447 285 479 3.35e-11 65.9
MS.gene83313.t1 AT5G42590 22.457 521 317 21 11 480 3 487 3.47e-11 65.9
MS.gene83313.t1 AT5G24950 28.492 179 119 6 280 454 290 463 4.71e-11 65.5
MS.gene83313.t1 AT3G14620 27.064 218 143 8 236 444 267 477 9.77e-11 64.3

Find 86 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAATCTCTAAAAGATTT+TGG 0.137226 6.1:+63089519 None:intergenic
TTAATGGTTAATCAACTATT+AGG 0.158968 6.1:-63089216 MS.gene83313:CDS
CATGCAGCCTATTTGGAAAA+TGG 0.161543 6.1:-63089617 MS.gene83313:CDS
ATTACTTTGTTACAAATTAT+AGG 0.221777 6.1:-63086668 MS.gene83313:intron
TCACTTACACATTGAGTAAA+TGG 0.222600 6.1:+63087886 None:intergenic
TAATGGTTAATCAACTATTA+GGG 0.224645 6.1:-63089215 MS.gene83313:CDS
GCAGGTAGCTATAAATTTAA+TGG 0.243570 6.1:-63089232 MS.gene83313:intron
CCTCCAAAGGGTGCATAAAA+TGG 0.261752 6.1:+63086750 None:intergenic
AAATGAACTGCTGAGATAAA+TGG 0.264118 6.1:+63086956 None:intergenic
TTATGAAGGAAAAGAGAAAT+TGG 0.283075 6.1:-63086782 MS.gene83313:intron
ATCATCAATCTTCTATTTGC+TGG 0.284436 6.1:-63088185 MS.gene83313:CDS
TAATGCCATGGAACAGCTTC+TGG 0.299807 6.1:-63088105 MS.gene83313:intron
GACTTGGTGGCATTGCAATT+TGG 0.310036 6.1:-63087678 MS.gene83313:CDS
GGAACCACAAAACATCCTTT+TGG 0.325780 6.1:+63086977 None:intergenic
TCCTCAATTTGTTGAAGAAA+TGG 0.332131 6.1:-63089997 MS.gene83313:CDS
TTTGTATATCATTCATGAAA+TGG 0.354787 6.1:+63089403 None:intergenic
AAAGGCCAACCTCTCCTTCC+TGG 0.360202 6.1:+63090068 None:intergenic
GATTCTCTAAGGACTAATTC+TGG 0.360425 6.1:-63087946 MS.gene83313:CDS
CTTGGAGAAGAATGACTTGT+TGG 0.378677 6.1:+63089346 None:intergenic
CCCTCAGCTCGGTTAGTGAA+TGG 0.382876 6.1:-63086298 MS.gene83313:CDS
TTCTCTTGGACAGGATGAAC+AGG 0.393722 6.1:-63087968 MS.gene83313:intron
AGGAGAGGTTGGCCTTTGAT+AGG 0.397236 6.1:-63090062 MS.gene83313:CDS
TTACCTTTCTACAAACATCT+TGG 0.410837 6.1:+63089328 None:intergenic
AGAAGCTGTTCCATGGCATT+AGG 0.421157 6.1:+63088107 None:intergenic
TCTCCAAGATGTTTGTAGAA+AGG 0.429524 6.1:-63089331 MS.gene83313:intron
ATGCAGCCTATTTGGAAAAT+GGG 0.433237 6.1:-63089616 MS.gene83313:CDS
ACCATTTCTTCAACAAATTG+AGG 0.439675 6.1:+63089996 None:intergenic
CCTCCAACAGAAGGTAATAA+TGG 0.446668 6.1:-63088266 MS.gene83313:CDS
CCATTATTACCTTCTGTTGG+AGG 0.456644 6.1:+63088266 None:intergenic
TGAGTCTCAAGTCAATGAAA+TGG 0.456966 6.1:-63089184 MS.gene83313:CDS
ATTACAAAACGGTTGAAACT+TGG 0.464085 6.1:+63089576 None:intergenic
ATAGAGGTCCAGAGACAAAA+TGG 0.470328 6.1:-63088290 MS.gene83313:CDS
AATGGTGTGATTACAGTTCA+AGG 0.481999 6.1:-63089489 MS.gene83313:CDS
AAAATTTCAATCCTTGGAGA+TGG 0.483860 6.1:-63086907 MS.gene83313:CDS
TTCATACCACACTGCTATGA+AGG 0.485579 6.1:-63089100 MS.gene83313:intron
AAGTCTGCAACAGCATCATC+TGG 0.488461 6.1:+63088209 None:intergenic
CTGGAGAAGAATTTCTTACA+TGG 0.490311 6.1:-63087927 MS.gene83313:CDS
AGGATGAACAGGATTCTCTA+AGG 0.491747 6.1:-63087957 MS.gene83313:CDS
ACACCATTATTACCTTCTGT+TGG 0.494158 6.1:+63088263 None:intergenic
GAAGGTAATAATGGTGTACT+TGG 0.498281 6.1:-63088257 MS.gene83313:CDS
TGATAGGTGACAGTATCAAT+TGG 0.505310 6.1:-63090046 MS.gene83313:CDS
TGAAGAGCCAGGGATGTTGA+TGG 0.506248 6.1:+63089119 None:intergenic
TTTCAATCCTTGGAGATGGA+TGG 0.506285 6.1:-63086903 MS.gene83313:CDS
AAGTAATTCAAATCAAGAAA+AGG 0.511104 6.1:-63090121 MS.gene83313:CDS
TGGCATTAGGACATTGAGTA+AGG 0.511964 6.1:+63088120 None:intergenic
AGAAGAATTTCTTACATGGC+AGG 0.523099 6.1:-63087923 MS.gene83313:CDS
TACTCAATGTCCTAATGCCA+TGG 0.528632 6.1:-63088117 MS.gene83313:CDS
TGCCACCAGGAAGGAGAGGT+TGG 0.529134 6.1:-63090073 MS.gene83313:CDS
GATGAAACACTTAGACTTGG+TGG 0.531512 6.1:-63087691 MS.gene83313:CDS
AGCAGTTCATTTAGATGAGA+AGG 0.532092 6.1:-63086945 MS.gene83313:CDS
TCCGTTCCCATCAACATCCC+TGG 0.534317 6.1:-63089126 MS.gene83313:CDS
GCAGTGTGGTATGAAGAGCC+AGG 0.536000 6.1:+63089108 None:intergenic
TGTACTTGGAAGACTTATAG+AGG 0.536543 6.1:-63088243 MS.gene83313:CDS
AGGAAGGAAGAGAAAAGCAT+AGG 0.545599 6.1:-63090101 MS.gene83313:CDS
TAACCGAGCTGAGGGAAAGA+AGG 0.546520 6.1:+63086306 None:intergenic
AAATCTAGCACCTCCTCCAA+AGG 0.546715 6.1:+63086737 None:intergenic
TGTCCTTCTTTCCCTCAGCT+CGG 0.552180 6.1:-63086309 MS.gene83313:CDS
ATGGATGGAACCTGAAAATG+AGG 0.553125 6.1:-63086888 MS.gene83313:intron
CAACAGATGGAAACAAATGA+AGG 0.553269 6.1:-63086341 MS.gene83313:intron
GAGAAAATATTTCAGAAACA+TGG 0.568818 6.1:-63090187 MS.gene83313:CDS
AATCTAGCACCTCCTCCAAA+GGG 0.570397 6.1:+63086738 None:intergenic
CCATTCACTAACCGAGCTGA+GGG 0.577408 6.1:+63086298 None:intergenic
CAGTTCAAGGAGAGCAACAA+AGG 0.577934 6.1:-63089476 MS.gene83313:CDS
TCAGGTTCCATCCATCTCCA+AGG 0.578285 6.1:+63086896 None:intergenic
GCCAGGGATGTTGATGGGAA+CGG 0.581255 6.1:+63089125 None:intergenic
AGGCGAGCTAGCTCAGCTCC+AGG 0.584667 6.1:+63086711 None:intergenic
GAAGAGCCAGGGATGTTGAT+GGG 0.585544 6.1:+63089120 None:intergenic
GCCATTCACTAACCGAGCTG+AGG 0.588963 6.1:+63086297 None:intergenic
ATTGATGAAACACTTAGACT+TGG 0.589739 6.1:-63087694 MS.gene83313:CDS
ACATACCAGAAGCTGTTCCA+TGG 0.591583 6.1:+63088100 None:intergenic
AGATTGCCACCAGGAAGGAG+AGG 0.600467 6.1:-63090077 MS.gene83313:CDS
GAGCAACAAAGGAAACTACA+TGG 0.605256 6.1:-63089465 MS.gene83313:CDS
CAAAATGGTCCTCCAACAGA+AGG 0.615753 6.1:-63088275 MS.gene83313:CDS
TTGATACTGTCACCTATCAA+AGG 0.616128 6.1:+63090050 None:intergenic
ATTTCTTCAACAAATTGAGG+AGG 0.616451 6.1:+63089999 None:intergenic
CCTATTTGGAAAATGGGCAG+TGG 0.617335 6.1:-63089610 MS.gene83313:CDS
TAAAATAAACAAGATCATAG+AGG 0.623444 6.1:-63088306 MS.gene83313:CDS
AATTCAAATCAAGAAAAGGA+AGG 0.625285 6.1:-63090117 MS.gene83313:CDS
TAGGAAGATTGCCACCAGGA+AGG 0.629546 6.1:-63090082 MS.gene83313:CDS
CAGTGTGGTATGAAGAGCCA+GGG 0.630530 6.1:+63089109 None:intergenic
TTGTTGAAGAAATGGTGCAA+AGG 0.636433 6.1:-63089989 MS.gene83313:intron
AATGGTTAATCAACTATTAG+GGG 0.636873 6.1:-63089214 MS.gene83313:CDS
AGCATAGGAAGATTGCCACC+AGG 0.646312 6.1:-63090086 MS.gene83313:CDS
AAAGAAGACATTCAATACCA+AGG 0.657807 6.1:-63087640 MS.gene83313:intron
GGCCAACCTCTCCTTCCTGG+TGG 0.718998 6.1:+63090071 None:intergenic
ATGGTACCTTCATAGCAGTG+TGG 0.761505 6.1:+63089094 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGAGTAAAAATATAATT+TGG + chr6.1:63089343-63089362 None:intergenic 10.0%
!!! AATTTTTTTCTTAATTGTTA+TGG - chr6.1:63089629-63089648 MS.gene83313:CDS 10.0%
!! AATATGTAGTTAATTATGTT+TGG + chr6.1:63089955-63089974 None:intergenic 15.0%
!! ATTACTTTGTTACAAATTAT+AGG - chr6.1:63089772-63089791 MS.gene83313:intron 15.0%
!! TAATTAACTACATATTAGAT+CGG - chr6.1:63089959-63089978 MS.gene83313:intron 15.0%
!!! ACATTTTAATGAAATTACTT+TGG - chr6.1:63088037-63088056 MS.gene83313:intron 15.0%
!!! ATTTTGAATTATTAATAACG+TGG - chr6.1:63089275-63089294 MS.gene83313:intron 15.0%
!!! TAAATTGATTTTCCTTATTT+AGG - chr6.1:63088380-63088399 MS.gene83313:intron 15.0%
!! AAGTAATTCAAATCAAGAAA+AGG - chr6.1:63086319-63086338 MS.gene83313:CDS 20.0%
!! ATTTCTATTTCGTAAATTTG+AGG + chr6.1:63087678-63087697 None:intergenic 20.0%
!! GATGAATAATGAATATAACA+AGG + chr6.1:63089930-63089949 None:intergenic 20.0%
!! GTATCAAATTATCTTGATTA+TGG + chr6.1:63086491-63086510 None:intergenic 20.0%
!! TAAAATAAACAAGATCATAG+AGG - chr6.1:63088134-63088153 MS.gene83313:CDS 20.0%
!! TAATGGTTAATCAACTATTA+GGG - chr6.1:63087225-63087244 MS.gene83313:intron 20.0%
!! TTAATCGATTAATCTTACAA+GGG - chr6.1:63087990-63088009 MS.gene83313:intron 20.0%
!! TTAATGGTTAATCAACTATT+AGG - chr6.1:63087224-63087243 MS.gene83313:intron 20.0%
!! TTATACTCACATATACTAAT+AGG + chr6.1:63088930-63088949 None:intergenic 20.0%
!! TTATTCACTAAAATGTTATG+TGG + chr6.1:63089583-63089602 None:intergenic 20.0%
!! TTTGTATATCATTCATGAAA+TGG + chr6.1:63087040-63087059 None:intergenic 20.0%
!!! AAGTTATTTCAACATATTAG+TGG + chr6.1:63088885-63088904 None:intergenic 20.0%
!!! AATTTAATACCACAGTTTTA+AGG - chr6.1:63087745-63087764 MS.gene83313:intron 20.0%
!!! TATATATGAAGTACTTGAAA+TGG - chr6.1:63087529-63087548 MS.gene83313:intron 20.0%
!!! TTTTAAAATTGCTCAAAGTT+TGG + chr6.1:63087073-63087092 None:intergenic 20.0%
! AAAATCGACAATAATTTGGA+TGG + chr6.1:63089991-63090010 None:intergenic 25.0%
! AAATGTTGTTCGAAAGTAAA+TGG + chr6.1:63087142-63087161 None:intergenic 25.0%
! AACAGATAAAATCTTCCATT+TGG - chr6.1:63086778-63086797 MS.gene83313:intron 25.0%
! AAGCTAAAAATTTCAATCCT+TGG - chr6.1:63089527-63089546 MS.gene83313:CDS 25.0%
! AATGGTTAATCAACTATTAG+GGG - chr6.1:63087226-63087245 MS.gene83313:intron 25.0%
! AATTCAAATCAAGAAAAGGA+AGG - chr6.1:63086323-63086342 MS.gene83313:CDS 25.0%
! ACATGAATGAATATCCAATT+TGG - chr6.1:63088988-63089007 MS.gene83313:intron 25.0%
! ATATATAAGATGGTTCTTGA+AGG + chr6.1:63087516-63087535 None:intergenic 25.0%
! ATGTAGTTAATTATGTTTGG+TGG + chr6.1:63089952-63089971 None:intergenic 25.0%
! ATTCTAACCATTGTTTATAG+AGG - chr6.1:63086579-63086598 MS.gene83313:intron 25.0%
! ATTTCTGCATATAATTCTCT+TGG - chr6.1:63088458-63088477 MS.gene83313:intron 25.0%
! CAACAAAATCGACAATAATT+TGG + chr6.1:63089995-63090014 None:intergenic 25.0%
! CAAGTACTTCATATATAAGA+TGG + chr6.1:63087526-63087545 None:intergenic 25.0%
! GAACTATAATGACATTATGT+TGG - chr6.1:63089121-63089140 MS.gene83313:CDS 25.0%
! GAGAAAATATTTCAGAAACA+TGG - chr6.1:63086253-63086272 MS.gene83313:CDS 25.0%
! GTAAATCATTCAAACATGTT+AGG + chr6.1:63090080-63090099 None:intergenic 25.0%
! GTGGTATTAAATTCAGAAAA+AGG + chr6.1:63087738-63087757 None:intergenic 25.0%
! GTTAATCGATTAATCTTACA+AGG - chr6.1:63087989-63088008 MS.gene83313:intron 25.0%
! TAACATAACGATGAACTAAT+CGG + chr6.1:63087973-63087992 None:intergenic 25.0%
! TACAATTTCAAGCACTAAAA+TGG + chr6.1:63087636-63087655 None:intergenic 25.0%
! TCAATATGTAACTCTTTCAT+TGG - chr6.1:63087810-63087829 MS.gene83313:intron 25.0%
! TCGCTTAAATATAACAATGT+TGG - chr6.1:63087702-63087721 MS.gene83313:intron 25.0%
! TTATGAAGGAAAAGAGAAAT+TGG - chr6.1:63089658-63089677 MS.gene83313:intron 25.0%
! TTCTAACCATTGTTTATAGA+GGG - chr6.1:63086580-63086599 MS.gene83313:intron 25.0%
! TTTGAATGATTTACAACAGA+TGG - chr6.1:63090086-63090105 MS.gene83313:CDS 25.0%
!! CATCGTTAATAATTTGAGAT+CGG - chr6.1:63089885-63089904 MS.gene83313:intron 25.0%
!! CTTCATTTTGCATTACAAAA+CGG + chr6.1:63086878-63086897 None:intergenic 25.0%
!! GATTGACGTTCTTTAATTTA+AGG - chr6.1:63087877-63087896 MS.gene83313:intron 25.0%
!! GTGTAAGTGATTAACATTTT+CGG - chr6.1:63088567-63088586 MS.gene83313:intron 25.0%
!!! AAATCTTTTAGAGATTTGGT+TGG - chr6.1:63086924-63086943 MS.gene83313:CDS 25.0%
!!! ACCAAATCTCTAAAAGATTT+TGG + chr6.1:63086924-63086943 None:intergenic 25.0%
!!! GAAATTAGTAAGAAAGCATT+AGG + chr6.1:63088443-63088462 None:intergenic 25.0%
!!! TCCAAAATCTTTTAGAGATT+TGG - chr6.1:63086920-63086939 MS.gene83313:CDS 25.0%
!!! TCTTCAACTCAATTTTGATT+AGG - chr6.1:63088610-63088629 MS.gene83313:intron 25.0%
!!! TTGTTATTTTGTGAATTCGA+GGG - chr6.1:63087907-63087926 MS.gene83313:CDS 25.0%
!!! TTTGTTATTTTGTGAATTCG+AGG - chr6.1:63087906-63087925 MS.gene83313:CDS 25.0%
AAAATTTCAATCCTTGGAGA+TGG - chr6.1:63089533-63089552 MS.gene83313:CDS 30.0%
AAAGAAGACATTCAATACCA+AGG - chr6.1:63088800-63088819 MS.gene83313:intron 30.0%
AAATGAACTGCTGAGATAAA+TGG + chr6.1:63089487-63089506 None:intergenic 30.0%
ACAATGAAACCTTAACAAAC+TGG + chr6.1:63088708-63088727 None:intergenic 30.0%
ACCATTTCTTCAACAAATTG+AGG + chr6.1:63086447-63086466 None:intergenic 30.0%
ATCATCAATCTTCTATTTGC+TGG - chr6.1:63088255-63088274 MS.gene83313:CDS 30.0%
ATCATTCAAACATGTTAGGT+AGG + chr6.1:63090076-63090095 None:intergenic 30.0%
ATGTGTACATGATTAAATGC+AGG - chr6.1:63087190-63087209 MS.gene83313:intron 30.0%
ATTAAGTAGCTTAACTATGC+AGG + chr6.1:63088407-63088426 None:intergenic 30.0%
ATTACAAAACGGTTGAAACT+TGG + chr6.1:63086867-63086886 None:intergenic 30.0%
ATTGATGAAACACTTAGACT+TGG - chr6.1:63088746-63088765 MS.gene83313:intron 30.0%
ATTTCTTCAACAAATTGAGG+AGG + chr6.1:63086444-63086463 None:intergenic 30.0%
CAACTATTTCATGACCAAAT+TGG + chr6.1:63089005-63089024 None:intergenic 30.0%
CAATTTGGTCATGAAATAGT+TGG - chr6.1:63089003-63089022 MS.gene83313:intron 30.0%
CTAGTCTCTTTATATATCAC+TGG + chr6.1:63087387-63087406 None:intergenic 30.0%
GAAAAATTTGCGCCTAATTA+TGG + chr6.1:63087578-63087597 None:intergenic 30.0%
GAAGAAAAAGAGCAATTTGA+AGG + chr6.1:63089752-63089771 None:intergenic 30.0%
GATATTGATGTGACATTCTT+TGG - chr6.1:63088084-63088103 MS.gene83313:intron 30.0%
GCAGGTAGCTATAAATTTAA+TGG - chr6.1:63087208-63087227 MS.gene83313:intron 30.0%
TAAAATCTTCCATTTGGCAT+AGG - chr6.1:63086784-63086803 MS.gene83313:intron 30.0%
TAATTTGGTCCTGAAATTGT+AGG + chr6.1:63089328-63089347 None:intergenic 30.0%
TCACTTACACATTGAGTAAA+TGG + chr6.1:63088557-63088576 None:intergenic 30.0%
TGTTATGGTCTCATTTATGA+AGG - chr6.1:63089644-63089663 MS.gene83313:intron 30.0%
TTACCTTTCTACAAACATCT+TGG + chr6.1:63087115-63087134 None:intergenic 30.0%
TTGCCAAATAGAGATTATAG+TGG - chr6.1:63086679-63086698 MS.gene83313:CDS 30.0%
TTTCATCAATAACCTGTTAG+TGG + chr6.1:63088736-63088755 None:intergenic 30.0%
! ATATTTTCATGCAGCCTATT+TGG - chr6.1:63086816-63086835 MS.gene83313:intron 30.0%
! CGTTTTGTAATGCAAAATGA+AGG - chr6.1:63086876-63086895 MS.gene83313:intron 30.0%
! TATTCCAAAAGGATGTTTTG+TGG - chr6.1:63089459-63089478 MS.gene83313:CDS 30.0%
! TGGTTAGAATGATTTTCACA+AGG + chr6.1:63086569-63086588 None:intergenic 30.0%
! TTGTTTTCTGATTTCGTTGA+TGG - chr6.1:63087284-63087303 MS.gene83313:intron 30.0%
! TTTGAAATGTTGTTGGTGTA+GGG + chr6.1:63089045-63089064 None:intergenic 30.0%
!! AGAGATTTGGTTGGTAAAAA+TGG - chr6.1:63086933-63086952 MS.gene83313:CDS 30.0%
!! TCCTCAATTTGTTGAAGAAA+TGG - chr6.1:63086443-63086462 MS.gene83313:intron 30.0%
!! TGTTCACTTTGAAATGTTGT+TGG + chr6.1:63089052-63089071 None:intergenic 30.0%
!!! GCAGATTTTGTTATTCCAAA+AGG - chr6.1:63089448-63089467 MS.gene83313:CDS 30.0%
!!! TGCAAAAAGCATTGTTTTTG+TGG + chr6.1:63088292-63088311 None:intergenic 30.0%
AACTATGCAGGACCTAAATA+AGG + chr6.1:63088395-63088414 None:intergenic 35.0%
AATGGTGTGATTACAGTTCA+AGG - chr6.1:63086951-63086970 MS.gene83313:CDS 35.0%
ACACCATTATTACCTTCTGT+TGG + chr6.1:63088180-63088199 None:intergenic 35.0%
ACTCTCAAAATTGTGTACCT+TGG + chr6.1:63088820-63088839 None:intergenic 35.0%
AGAAGAATTTCTTACATGGC+AGG - chr6.1:63088517-63088536 MS.gene83313:intron 35.0%
AGCAGTTCATTTAGATGAGA+AGG - chr6.1:63089495-63089514 MS.gene83313:CDS 35.0%
AGCATAGAACCTTAAAACTG+TGG + chr6.1:63087757-63087776 None:intergenic 35.0%
ATGCAGCCTATTTGGAAAAT+GGG - chr6.1:63086824-63086843 MS.gene83313:intron 35.0%
CAACAGATGGAAACAAATGA+AGG - chr6.1:63090099-63090118 MS.gene83313:CDS 35.0%
CTGGAGAAGAATTTCTTACA+TGG - chr6.1:63088513-63088532 MS.gene83313:intron 35.0%
CTGGTCTAAAAGTTTACTCA+TGG + chr6.1:63087368-63087387 None:intergenic 35.0%
GAAGGTAATAATGGTGTACT+TGG - chr6.1:63088183-63088202 MS.gene83313:CDS 35.0%
GTGCTTGAAATTGTAAGAGT+CGG - chr6.1:63087641-63087660 MS.gene83313:CDS 35.0%
TAACACTGCAAGCCATAATT+AGG - chr6.1:63087563-63087582 MS.gene83313:intron 35.0%
TAACCATTGTTTATAGAGGG+AGG - chr6.1:63086583-63086602 MS.gene83313:intron 35.0%
TCAACTACAAGTCATACAAG+TGG + chr6.1:63090031-63090050 None:intergenic 35.0%
TCTCCAAGATGTTTGTAGAA+AGG - chr6.1:63087109-63087128 MS.gene83313:intron 35.0%
TGAGTCTCAAGTCAATGAAA+TGG - chr6.1:63087256-63087275 MS.gene83313:intron 35.0%
TGATACTGTCCTACAATTTC+AGG - chr6.1:63089316-63089335 MS.gene83313:intron 35.0%
TGATAGGTGACAGTATCAAT+TGG - chr6.1:63086394-63086413 MS.gene83313:intron 35.0%
TGCATATAATTCTCTTGGAC+AGG - chr6.1:63088463-63088482 MS.gene83313:intron 35.0%
TGTACTTGGAAGACTTATAG+AGG - chr6.1:63088197-63088216 MS.gene83313:CDS 35.0%
TGTGACATTCTTTGGATATC+AGG - chr6.1:63088092-63088111 MS.gene83313:intron 35.0%
TTGATACTGTCACCTATCAA+AGG + chr6.1:63086393-63086412 None:intergenic 35.0%
TTGTTGAAGAAATGGTGCAA+AGG - chr6.1:63086451-63086470 MS.gene83313:intron 35.0%
! AATTTGAGATCGGTGGTTAA+TGG - chr6.1:63089895-63089914 MS.gene83313:intron 35.0%
! AGAAAACAGTCTTGTGATTG+TGG + chr6.1:63086758-63086777 None:intergenic 35.0%
! CGTTAATAATTTGAGATCGG+TGG - chr6.1:63089888-63089907 MS.gene83313:intron 35.0%
! GATTCTCTAAGGACTAATTC+TGG - chr6.1:63088494-63088513 MS.gene83313:intron 35.0%
!! AAGGTACACAATTTTGAGAG+TGG - chr6.1:63088819-63088838 MS.gene83313:intron 35.0%
!! CTTTGAAATGTTGTTGGTGT+AGG + chr6.1:63089046-63089065 None:intergenic 35.0%
!! GCTTGCAGTGTTATTTGAAA+TGG + chr6.1:63087556-63087575 None:intergenic 35.0%
!! TGTGGATTAACCTCATTTTC+AGG + chr6.1:63089565-63089584 None:intergenic 35.0%
AGGATGAACAGGATTCTCTA+AGG - chr6.1:63088483-63088502 MS.gene83313:intron 40.0%
ATAGAGGTCCAGAGACAAAA+TGG - chr6.1:63088150-63088169 MS.gene83313:CDS 40.0%
ATGGATGGAACCTGAAAATG+AGG - chr6.1:63089552-63089571 MS.gene83313:CDS 40.0%
CATGCAGCCTATTTGGAAAA+TGG - chr6.1:63086823-63086842 MS.gene83313:intron 40.0%
CCATTATTACCTTCTGTTGG+AGG + chr6.1:63088177-63088196 None:intergenic 40.0%
CCTCCAACAGAAGGTAATAA+TGG - chr6.1:63088174-63088193 MS.gene83313:CDS 40.0%
CTTACCATACCTATGCCAAA+TGG + chr6.1:63086796-63086815 None:intergenic 40.0%
GAGCAACAAAGGAAACTACA+TGG - chr6.1:63086975-63086994 MS.gene83313:CDS 40.0%
GATGAAACACTTAGACTTGG+TGG - chr6.1:63088749-63088768 MS.gene83313:intron 40.0%
GCGCCACTATAATCTCTATT+TGG + chr6.1:63086685-63086704 None:intergenic 40.0%
TACTCAATGTCCTAATGCCA+TGG - chr6.1:63088323-63088342 MS.gene83313:CDS 40.0%
TATAGTTCCCGCGAATACAA+TGG + chr6.1:63089109-63089128 None:intergenic 40.0%
TCATTGTGTCTTCCACTAAC+AGG - chr6.1:63088721-63088740 MS.gene83313:intron 40.0%
TCTTCCATTTGGCATAGGTA+TGG - chr6.1:63086789-63086808 MS.gene83313:intron 40.0%
TGGCATTAGGACATTGAGTA+AGG + chr6.1:63088323-63088342 None:intergenic 40.0%
TTAGAGTCTAGACAGAGAGT+CGG - chr6.1:63089221-63089240 MS.gene83313:CDS 40.0%
TTCATACCACACTGCTATGA+AGG - chr6.1:63087340-63087359 MS.gene83313:intron 40.0%
TTTCAATCCTTGGAGATGGA+TGG - chr6.1:63089537-63089556 MS.gene83313:CDS 40.0%
! AGGAAGGAAGAGAAAAGCAT+AGG - chr6.1:63086339-63086358 MS.gene83313:intron 40.0%
! AGTCCATTTTATGCACCCTT+TGG - chr6.1:63089687-63089706 MS.gene83313:intron 40.0%
! CTTGGAGAAGAATGACTTGT+TGG + chr6.1:63087097-63087116 None:intergenic 40.0%
! GGAACCACAAAACATCCTTT+TGG + chr6.1:63089466-63089485 None:intergenic 40.0%
!! CAGTAGAGACCAGTTTGTTA+AGG - chr6.1:63088696-63088715 MS.gene83313:intron 40.0%
AAATCTAGCACCTCCTCCAA+AGG + chr6.1:63089706-63089725 None:intergenic 45.0%
AAGTCTGCAACAGCATCATC+TGG + chr6.1:63088234-63088253 None:intergenic 45.0%
AATCTAGCACCTCCTCCAAA+GGG + chr6.1:63089705-63089724 None:intergenic 45.0%
ACATACCAGAAGCTGTTCCA+TGG + chr6.1:63088343-63088362 None:intergenic 45.0%
AGAAGCTGTTCCATGGCATT+AGG + chr6.1:63088336-63088355 None:intergenic 45.0%
ATGGTACCTTCATAGCAGTG+TGG + chr6.1:63087349-63087368 None:intergenic 45.0%
ATGTTGTTGGTGTAGGGACT+AGG + chr6.1:63089039-63089058 None:intergenic 45.0%
CAAAATGGTCCTCCAACAGA+AGG - chr6.1:63088165-63088184 MS.gene83313:CDS 45.0%
CAGTTCAAGGAGAGCAACAA+AGG - chr6.1:63086964-63086983 MS.gene83313:CDS 45.0%
CCTATTTGGAAAATGGGCAG+TGG - chr6.1:63086830-63086849 MS.gene83313:intron 45.0%
GTGCCTCCCTCTATAAACAA+TGG + chr6.1:63086589-63086608 None:intergenic 45.0%
TAATGCCATGGAACAGCTTC+TGG - chr6.1:63088335-63088354 MS.gene83313:intron 45.0%
TAGGTCTGCTATGGTCAAGA+GGG + chr6.1:63089816-63089835 None:intergenic 45.0%
TGTGCTTCTTAGGTCTGCTA+TGG + chr6.1:63089825-63089844 None:intergenic 45.0%
TTAGGTCTGCTATGGTCAAG+AGG + chr6.1:63089817-63089836 None:intergenic 45.0%
TTCTCTTGGACAGGATGAAC+AGG - chr6.1:63088472-63088491 MS.gene83313:intron 45.0%
! AGACCTAAGAAGCACAGACA+CGG - chr6.1:63089829-63089848 MS.gene83313:intron 45.0%
! AGGCGCAAATTTTTCTCGTC+TGG - chr6.1:63087583-63087602 MS.gene83313:intron 45.0%
! CCACTGCCCATTTTCCAAAT+AGG + chr6.1:63086833-63086852 None:intergenic 45.0%
! CCATTTTATGCACCCTTTGG+AGG - chr6.1:63089690-63089709 MS.gene83313:intron 45.0%
! CCTCCAAAGGGTGCATAAAA+TGG + chr6.1:63089693-63089712 None:intergenic 45.0%
! TTGGAGGACCATTTTGTCTC+TGG + chr6.1:63088161-63088180 None:intergenic 45.0%
!! GACTTGGTGGCATTGCAATT+TGG - chr6.1:63088762-63088781 MS.gene83313:intron 45.0%
!! TTTTATGCACCCTTTGGAGG+AGG - chr6.1:63089693-63089712 MS.gene83313:intron 45.0%
!! ATATTAATTAAATTTATAGT+TGG - chr6.1:63088667-63088686 MS.gene83313:intron 5.0%
AGCATAGGAAGATTGCCACC+AGG - chr6.1:63086354-63086373 MS.gene83313:intron 50.0%
ATCAGTATCCGTGTCGTGTC+TGG + chr6.1:63089858-63089877 None:intergenic 50.0%
CAGTGTGGTATGAAGAGCCA+GGG + chr6.1:63087334-63087353 None:intergenic 50.0%
CCATTCACTAACCGAGCTGA+GGG + chr6.1:63090145-63090164 None:intergenic 50.0%
CCGCGAATACAATGGAGAGA+CGG + chr6.1:63089101-63089120 None:intergenic 50.0%
CCGTCTCTCCATTGTATTCG+CGG - chr6.1:63089098-63089117 MS.gene83313:intron 50.0%
CGTCTCTCCATTGTATTCGC+GGG - chr6.1:63089099-63089118 MS.gene83313:intron 50.0%
GAAGAGCCAGGGATGTTGAT+GGG + chr6.1:63087323-63087342 None:intergenic 50.0%
TAACCGAGCTGAGGGAAAGA+AGG + chr6.1:63090137-63090156 None:intergenic 50.0%
TAGGAAGATTGCCACCAGGA+AGG - chr6.1:63086358-63086377 MS.gene83313:intron 50.0%
TCAGGTTCCATCCATCTCCA+AGG + chr6.1:63089547-63089566 None:intergenic 50.0%
TCTGCTATGGTCAAGAGGGA+GGG + chr6.1:63089812-63089831 None:intergenic 50.0%
TGAAGAGCCAGGGATGTTGA+TGG + chr6.1:63087324-63087343 None:intergenic 50.0%
TGTCCGTGTCTGTGCTTCTT+AGG + chr6.1:63089835-63089854 None:intergenic 50.0%
TGTCCTTCTTTCCCTCAGCT+CGG - chr6.1:63090131-63090150 MS.gene83313:CDS 50.0%
!! AGGAGAGGTTGGCCTTTGAT+AGG - chr6.1:63086378-63086397 MS.gene83313:intron 50.0%
!! GTGTAGGGACTAGGTTGATG+AGG + chr6.1:63089030-63089049 None:intergenic 50.0%
!!! GGAGGTGCTAGATTTTGTCC+TGG - chr6.1:63089711-63089730 MS.gene83313:intron 50.0%
AAAGGCCAACCTCTCCTTCC+TGG + chr6.1:63086375-63086394 None:intergenic 55.0%
AGATTGCCACCAGGAAGGAG+AGG - chr6.1:63086363-63086382 MS.gene83313:intron 55.0%
CCCTCAGCTCGGTTAGTGAA+TGG - chr6.1:63090142-63090161 MS.gene83313:CDS 55.0%
GCAGTGTGGTATGAAGAGCC+AGG + chr6.1:63087335-63087354 None:intergenic 55.0%
GCCATTCACTAACCGAGCTG+AGG + chr6.1:63090146-63090165 None:intergenic 55.0%
GTCTGCTATGGTCAAGAGGG+AGG + chr6.1:63089813-63089832 None:intergenic 55.0%
TCCGTTCCCATCAACATCCC+TGG - chr6.1:63087314-63087333 MS.gene83313:intron 55.0%
! GCCAGGGATGTTGATGGGAA+CGG + chr6.1:63087318-63087337 None:intergenic 55.0%
CACGGACACCAGACACGACA+CGG - chr6.1:63089847-63089866 MS.gene83313:intron 60.0%
GTCAAGAGGGAGGGAGAGAG+AGG + chr6.1:63089803-63089822 None:intergenic 60.0%
TGCCACCAGGAAGGAGAGGT+TGG - chr6.1:63086367-63086386 MS.gene83313:intron 60.0%
AGGCGAGCTAGCTCAGCTCC+AGG + chr6.1:63089732-63089751 None:intergenic 65.0%
GGCCAACCTCTCCTTCCTGG+TGG + chr6.1:63086372-63086391 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 63086249 63090213 63086249 ID=MS.gene83313
chr6.1 mRNA 63086249 63090213 63086249 ID=MS.gene83313.t1;Parent=MS.gene83313
chr6.1 exon 63089990 63090213 63089990 ID=MS.gene83313.t1.exon1;Parent=MS.gene83313.t1
chr6.1 CDS 63089990 63090213 63089990 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63089332 63089656 63089332 ID=MS.gene83313.t1.exon2;Parent=MS.gene83313.t1
chr6.1 CDS 63089332 63089656 63089332 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63089101 63089250 63089101 ID=MS.gene83313.t1.exon3;Parent=MS.gene83313.t1
chr6.1 CDS 63089101 63089250 63089101 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63088106 63088348 63088106 ID=MS.gene83313.t1.exon4;Parent=MS.gene83313.t1
chr6.1 CDS 63088106 63088348 63088106 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63087894 63087977 63087894 ID=MS.gene83313.t1.exon5;Parent=MS.gene83313.t1
chr6.1 CDS 63087894 63087977 63087894 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63087641 63087719 63087641 ID=MS.gene83313.t1.exon6;Parent=MS.gene83313.t1
chr6.1 CDS 63087641 63087719 63087641 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63086889 63087010 63086889 ID=MS.gene83313.t1.exon7;Parent=MS.gene83313.t1
chr6.1 CDS 63086889 63087010 63086889 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63086669 63086796 63086669 ID=MS.gene83313.t1.exon8;Parent=MS.gene83313.t1
chr6.1 CDS 63086669 63086796 63086669 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
chr6.1 exon 63086249 63086357 63086249 ID=MS.gene83313.t1.exon9;Parent=MS.gene83313.t1
chr6.1 CDS 63086249 63086357 63086249 ID=cds.MS.gene83313.t1;Parent=MS.gene83313.t1
Gene Sequence

>MS.gene83313

ATGAGAGAAAATATTTCAGAAACATGGTTAGTGATGATCATTGTGATACTGTTCACTGCAATATTTGCAAAAGTAATTCAAATCAAGAAAAGGAAGGAAGAGAAAAGCATAGGAAGATTGCCACCAGGAAGGAGAGGTTGGCCTTTGATAGGTGACAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAATTTGTTGAAGAAATGGTGCAAAGGTATTTACTAGTATACCATAATCAAGATAATTTGATACTTAATCAAGATAATTTGAAATTTGAGTTGTGTTAATTTGTAATTTGTTAGAAATGCCTTGTGAAAATCATTCTAACCATTGTTTATAGAGGGAGGCACTATAGTACTATATCATAGCAGCATTTGAATAGATCTCTATTGTTCTGCGATACGCTATTAGTATAAGATATTGCCAAATAGAGATTATAGTGGCGCTATAGCGCTGTTGTGTCGAGAAATTTAAACAAACTTCTAGTTTTTGCTATCCACAATCACAAGACTGTTTTCTAACAGATAAAATCTTCCATTTGGCATAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGAAAATGGGCAGTGGTGTCGTCTGATCCAAGTTTCAACCGTTTTGTAATGCAAAATGAAGGCAAATTATTCATGTCGAGTTATCCAAAATCTTTTAGAGATTTGGTTGGTAAAAATGGTGTGATTACAGTTCAAGGAGAGCAACAAAGGAAACTACATGGAATCGCATCTAATATGATGCGATTAGATAAGCTTAAGTTCCATTTCATGAATGATATACAAAATGTCATGATCCAAACTTTGAGCAATTTTAAAAACCAACAAGTCATTCTTCTCCAAGATGTTTGTAGAAAGGTAACGATCCATTTACTTTCGAACAACATTTTCATTTTCAAGTCACTCATTTTGAACTAATGTGTACATGATTAAATGCAGGTAGCTATAAATTTAATGGTTAATCAACTATTAGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAGTTGTTTTCTGATTTCGTTGATGGCTGTCTATCCGTTCCCATCAACATCCCTGGCTCTTCATACCACACTGCTATGAAGGTACCATGAGTAAACTTTTAGACCAGTGATATATAAAGAGACTAGAATTGCATAAAGAAAACAAAAAGAGTGTTAAAAAGTCATAATTGTTTAGCTACATAAAGTTGAACTATATTTCAAAGAAATGAGTATATTGTTCTCATGATCATATCCTTCAAGAACCATCTTATATATGAAGTACTTGAAATGGTCCATTTCAAATAACACTGCAAGCCATAATTAGGCGCAAATTTTTCTCGTCTGGCTTATTGATTGTTATGCAAGTAAATCACCATTTTAGTGCTTGAAATTGTAAGAGTCGGTAAATTCAGTACCTCAAATTTACGAAATAGAAATTCAGTCGCTTAAATATAACAATGTTGGTCAATCTAGTCCTTTTTCTGAATTTAATACCACAGTTTTAAGGTTCTATGCTTGTCAAGATGCAGCAAAAGACTACTCATTCAAGTCAATATGTAACTCTTTCATTGGTTTTGATTAATGTTTACTAAAAAGATATTTTGATTGACTAAATTGATTGACGTTCTTTAATTTAAGGAACTAATTTGTTATTTTGTGAATTCGAGGGACTAAATTTCTCGACTGTTACGATTTCAAGTACTGAAATGCCGATTAGTTCATCGTTATGTTAATCGATTAATCTTACAAGGGTTTTTCTATCATGAGCAAATTCGCACATTTTAATGAAATTACTTTGGCAAAATATAATTCTAGATTAATCAGATATTGATGTGACATTCTTTGGATATCAGGCAAGAGAGAAAATCATAAGTAAAATAAACAAGATCATAGAGGTCCAGAGACAAAATGGTCCTCCAACAGAAGGTAATAATGGTGTACTTGGAAGACTTATAGAGGAAGATAGTTTGCCAGATGATGCTGTTGCAGACTTCATCATCAATCTTCTATTTGCTGGCAATGAAACAACCACAAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGTCCTAATGCCATGGAACAGCTTCTGGTATGTATCATAGAATTAATCTTTAAATTGATTTTCCTTATTTAGGTCCTGCATAGTTAAGCTACTTAATTAAGTGCTTATGTCCTAATGCTTTCTTACTAATTTCTGCATATAATTCTCTTGGACAGGATGAACAGGATTCTCTAAGGACTAATTCTGGAGAAGAATTTCTTACATGGCAGGACTATAAAGCAATGCCATTTACTCAATGTGTAAGTGATTAACATTTTCGGCTATTTTTCATAACAGATTGTCTTCAACTCAATTTTGATTAGGTAGTTCATCTCATAAATATTTTTCAATTTGAAAGATATTAATTAAATTTATAGTTGGCATATTCAGTAGAGACCAGTTTGTTAAGGTTTCATTGTGTCTTCCACTAACAGGTTATTGATGAAACACTTAGACTTGGTGGCATTGCAATTTGGTTACTTAGAGAAGCAAAAGAAGACATTCAATACCAAGGTACACAATTTTGAGAGTGGTTGATAAGCAAGTTCAATGTATAAGAACTTATATCATTATCCACTAATATGTTGAAATAACTTAAAATAAATAATGTTTTGTCAACCTATTAGTATATGTGAGTATAAATTCTCTTACATTGAAAATGATATCATTTAATATTAGTACATGAATGAATATCCAATTTGGTCATGAAATAGTTGGACCTCATCAACCTAGTCCCTACACCAACAACATTTCAAAGTGAACATTGAAATTCAAAAATGTTAATCAGATCCGTCTCTCCATTGTATTCGCGGGAACTATAATGACATTATGTTGGTAATTTTATAGATACATTTGAATGTTGAAACTAAGAGAATAATGTCAGAGATGTCAGAGATGCACTTGATAACATATTTAGAGTCTAGACAGAGAGTCGGACTTCATTAATATTATACAATTCTAAAGATTATTTTGAATTATTAATAACGTGGACAACTAAATCGATACTTTGATACTGTCCTACAATTTCAGGACCAAATTATATTTTTACTCAATAGTGCAATGAACTATTATTGCAGCTATGATATGCATCTAAAAGCTTAATACTATAAAACTACTGACAGTAGCTTATCTATTTTTGAGCAGATTTTGTTATTCCAAAAGGATGTTTTGTGGTTCCATTTATCTCAGCAGTTCATTTAGATGAGAAGGTGTACAATGAAGCTAAAAATTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGTTAATCCACATAACATTTTAGTGAATAATGTATATAATTTTGTACTTTTATTTCAATTTTTTTCTTAATTGTTATGGTCTCATTTATGAAGGAAAAGAGAAATTGGAGAAGTAGTCCATTTTATGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCTGGAGCTGAGCTAGCTCGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACAAATTATAGGTAATGCCTCTCTCTCCCTCCCTCTTGACCATAGCAGACCTAAGAAGCACAGACACGGACACCAGACACGACACGGATACTGATACGCTGACATCGTTAATAATTTGAGATCGGTGGTTAATGGATTGTGACACCTTGTTATATTCATTATTCATCCACCAAACATAATTAACTACATATTAGATCGGCGTTAACCATCCAAATTATTGTCGATTTTGTTGTAAAATTTGTGTTCCACTTGTATGACTTGTAGTTGAAGCATAATCTATCAAATTTGATCCTACCTAACATGTTTGAATGATTTACAACAGATGGAAACAAATGAAGGAAGATAGAATGTCCTTCTTTCCCTCAGCTCGGTTAGTGAATGGCTTTGAAATTTGTCTAACAAAAAGACATGATAATAATCAAAGAAACTGA

Protein sequence

>MS.gene83313.t1

MRENISETWLVMIIVILFTAIFAKVIQIKKRKEEKSIGRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVQRYGKIFSCSLFGKWAVVSSDPSFNRFVMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIQTLSNFKNQQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSVPINIPGSSYHTAMKAREKIISKINKIIEVQRQNGPPTEGNNGVLGRLIEEDSLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPNAMEQLLDEQDSLRTNSGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLLREAKEDIQYQDFVIPKGCFVVPFISAVHLDEKVYNEAKNFNPWRWMEPENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTNYRWKQMKEDRMSFFPSARLVNGFEICLTKRHDNNQRN