Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83338.t1 | XP_013463924.1 | 99.2 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 3.00E-146 | 527.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83338.t1 | Q4I8Q4 | 32.8 | 232 | 127 | 7 | 30 | 248 | 16 | 231 | 8.2e-28 | 125.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83338.t1 | A0A072V7E9 | 99.2 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 2.1e-146 | 527.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene83338 | MS.gene89061 | PPI |
| MS.gene026794 | MS.gene83338 | PPI |
| MS.gene034040 | MS.gene83338 | PPI |
| MS.gene83338 | MS.gene79485 | PPI |
| MS.gene83338 | MS.gene034041 | PPI |
| MS.gene83338 | MS.gene37311 | PPI |
| MS.gene83338 | MS.gene034042 | PPI |
| MS.gene36243 | MS.gene83338 | PPI |
| MS.gene83338 | MS.gene86352 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83338.t1 | MTR_2g054780 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 523 |
| MS.gene83338.t1 | MTR_2g054780 | 96.471 | 255 | 2 | 1 | 1 | 255 | 1 | 248 | 0.0 | 502 |
| MS.gene83338.t1 | MTR_3g107630 | 72.458 | 236 | 65 | 0 | 17 | 252 | 19 | 254 | 3.56e-132 | 374 |
| MS.gene83338.t1 | MTR_2g103140 | 67.717 | 254 | 80 | 1 | 1 | 252 | 1 | 254 | 1.08e-121 | 347 |
| MS.gene83338.t1 | MTR_4g011320 | 66.255 | 243 | 82 | 0 | 10 | 252 | 13 | 255 | 2.48e-119 | 342 |
| MS.gene83338.t1 | MTR_4g132890 | 27.632 | 228 | 134 | 7 | 32 | 248 | 4 | 211 | 4.15e-19 | 83.2 |
| MS.gene83338.t1 | MTR_4g132890 | 26.857 | 175 | 100 | 6 | 82 | 248 | 3 | 157 | 7.93e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83338.t1 | AT5G20060 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.89e-141 | 397 |
| MS.gene83338.t1 | AT5G20060 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.89e-141 | 397 |
| MS.gene83338.t1 | AT5G20060 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.89e-141 | 397 |
| MS.gene83338.t1 | AT5G20060 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.89e-141 | 397 |
| MS.gene83338.t1 | AT3G15650 | 62.637 | 273 | 82 | 2 | 1 | 253 | 1 | 273 | 2.57e-125 | 357 |
| MS.gene83338.t1 | AT1G52700 | 64.961 | 254 | 88 | 1 | 1 | 253 | 1 | 254 | 2.75e-124 | 353 |
| MS.gene83338.t1 | AT1G52700 | 64.961 | 254 | 88 | 1 | 1 | 253 | 1 | 254 | 2.75e-124 | 353 |
| MS.gene83338.t1 | AT1G52700 | 65.984 | 244 | 83 | 0 | 10 | 253 | 2 | 245 | 1.43e-122 | 349 |
| MS.gene83338.t1 | AT3G15650 | 67.323 | 254 | 82 | 1 | 1 | 253 | 1 | 254 | 1.79e-121 | 347 |
| MS.gene83338.t1 | AT3G15650 | 69.620 | 237 | 72 | 0 | 17 | 253 | 28 | 264 | 4.90e-119 | 341 |
| MS.gene83338.t1 | AT1G52700 | 62.376 | 202 | 76 | 0 | 52 | 253 | 1 | 202 | 5.04e-95 | 278 |
| MS.gene83338.t1 | AT1G52700 | 66.667 | 195 | 64 | 1 | 1 | 194 | 1 | 195 | 5.75e-95 | 277 |
| MS.gene83338.t1 | AT1G52700 | 66.667 | 195 | 64 | 1 | 1 | 194 | 1 | 195 | 5.75e-95 | 277 |
| MS.gene83338.t1 | AT1G51300 | 40.928 | 237 | 132 | 2 | 18 | 252 | 34 | 264 | 2.72e-62 | 197 |
| MS.gene83338.t1 | AT1G51300 | 42.308 | 208 | 112 | 2 | 18 | 223 | 34 | 235 | 3.10e-56 | 181 |
| MS.gene83338.t1 | AT1G52695 | 38.430 | 242 | 134 | 5 | 10 | 250 | 4 | 231 | 1.02e-48 | 160 |
| MS.gene83338.t1 | AT1G51300 | 46.667 | 150 | 72 | 2 | 18 | 165 | 23 | 166 | 5.95e-42 | 142 |
| MS.gene83338.t1 | AT1G47786 | 41.463 | 164 | 80 | 4 | 4 | 165 | 34 | 183 | 8.67e-34 | 121 |
| MS.gene83338.t1 | AT1G52470 | 32.794 | 247 | 144 | 4 | 3 | 248 | 1 | 226 | 1.34e-32 | 119 |
| MS.gene83338.t1 | AT1G52460 | 37.395 | 238 | 112 | 9 | 23 | 251 | 12 | 221 | 1.89e-32 | 119 |
| MS.gene83338.t1 | AT1G47780 | 48.182 | 110 | 54 | 1 | 59 | 168 | 23 | 129 | 2.84e-27 | 102 |
| MS.gene83338.t1 | AT1G52470 | 33.500 | 200 | 111 | 4 | 3 | 201 | 1 | 179 | 4.21e-26 | 100 |
| MS.gene83338.t1 | AT1G52470 | 33.679 | 193 | 106 | 4 | 3 | 194 | 1 | 172 | 5.81e-25 | 97.8 |
| MS.gene83338.t1 | AT4G22300 | 31.111 | 225 | 124 | 7 | 35 | 248 | 51 | 255 | 1.40e-22 | 93.6 |
| MS.gene83338.t1 | AT1G52440 | 31.197 | 234 | 103 | 7 | 23 | 251 | 16 | 196 | 1.34e-21 | 89.7 |
| MS.gene83338.t1 | AT4G22305 | 27.803 | 223 | 134 | 6 | 35 | 248 | 6 | 210 | 2.02e-18 | 81.6 |
Find 74 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTGGCTAACATCAAAAT+TGG | 0.165141 | 2.2:-29906968 | MS.gene83338:CDS |
| TGCTTTACTTCCGGGAAGTA+TGG | 0.226039 | 2.2:-29907982 | MS.gene83338:CDS |
| CAAACATCGTCCGTTTCTTC+TGG | 0.239861 | 2.2:+29906991 | None:intergenic |
| ACTCGGCCAATGTCTTTATT+TGG | 0.262981 | 2.2:-29909504 | MS.gene83338:CDS |
| GTTGCTTGGTGTTTACCTTT+AGG | 0.271813 | 2.2:+29911695 | None:intergenic |
| TCGAAGTGCTTGACTTCTAA+TGG | 0.272094 | 2.2:-29907166 | MS.gene83338:CDS |
| GTAACTTTCAAAGCTTATAA+TGG | 0.292571 | 2.2:-29907133 | MS.gene83338:CDS |
| TCTGCATCCTGCTTTACTTC+CGG | 0.304345 | 2.2:-29907991 | MS.gene83338:CDS |
| TTTGTGTGATGCAGATTAAA+TGG | 0.339269 | 2.2:-29909545 | MS.gene83338:intron |
| CTGCATCCTGCTTTACTTCC+GGG | 0.350957 | 2.2:-29907990 | MS.gene83338:CDS |
| TAACTTTCAAAGCTTATAAT+GGG | 0.351735 | 2.2:-29907132 | MS.gene83338:intron |
| CAGCTGTTGGTTTAAGTGGC+TGG | 0.364615 | 2.2:-29907927 | MS.gene83338:CDS |
| TTGCACGGCCTCGGTGATAA+TGG | 0.370731 | 2.2:-29911662 | MS.gene83338:CDS |
| TGATTTCTCACCAAACTTGT+AGG | 0.380140 | 2.2:+29907189 | None:intergenic |
| AACACCAAGCAACTATAGTT+TGG | 0.387815 | 2.2:-29911685 | MS.gene83338:CDS |
| ATTGCCATTCCCATACTTCC+CGG | 0.416403 | 2.2:+29907972 | None:intergenic |
| CGGCCAATGTCTTTATTTGG+TGG | 0.418435 | 2.2:-29909501 | MS.gene83338:CDS |
| GCTGCAACAGCATATGAGTT+TGG | 0.425946 | 2.2:-29911737 | MS.gene83338:CDS |
| TCAAACATACAAGCAGTAGA+TGG | 0.440371 | 2.2:+29909474 | None:intergenic |
| TCCCGATGATCTAGAAGGTT+TGG | 0.440893 | 2.2:-29909155 | MS.gene83338:CDS |
| TTTCCATGACACATCAAAAT+GGG | 0.444600 | 2.2:+29907743 | None:intergenic |
| ACATCAAAATTGGGCCTTGA+GGG | 0.445931 | 2.2:-29906958 | MS.gene83338:CDS |
| AAAGCAGGATGCAGAGTAAA+GGG | 0.452204 | 2.2:+29907999 | None:intergenic |
| GGGTTCTGTAGACAACAAAT+TGG | 0.456631 | 2.2:+29909111 | None:intergenic |
| TCCAAACCTTCTAGATCATC+GGG | 0.462352 | 2.2:+29909154 | None:intergenic |
| GGTGTTGGAGGGTTTAGCAT+GGG | 0.479769 | 2.2:-29908033 | MS.gene83338:CDS |
| ATAGTTTGGTTGCACGGCCT+CGG | 0.479960 | 2.2:-29911671 | MS.gene83338:CDS |
| CAGTTAAGCTTGGTGTTGGA+GGG | 0.484354 | 2.2:-29908044 | MS.gene83338:CDS |
| ACCTATGTAGTCAGGCCTAA+AGG | 0.485798 | 2.2:-29911710 | MS.gene83338:CDS |
| GATGTGGTTCCCTACAAGTT+TGG | 0.487511 | 2.2:-29907199 | MS.gene83338:CDS |
| GCTTGGCTAACATCAAAATT+GGG | 0.487927 | 2.2:-29906967 | MS.gene83338:CDS |
| AGTGCAGCTGTTGGTTTAAG+TGG | 0.489233 | 2.2:-29907931 | MS.gene83338:CDS |
| TAAAGCAGGATGCAGAGTAA+AGG | 0.489254 | 2.2:+29907998 | None:intergenic |
| ATTGGCCGAGTTGGAGCAGT+TGG | 0.490592 | 2.2:+29909516 | None:intergenic |
| GATTTCTCACCAAACTTGTA+GGG | 0.491095 | 2.2:+29907190 | None:intergenic |
| GCAGTTAAGCTTGGTGTTGG+AGG | 0.491887 | 2.2:-29908045 | MS.gene83338:intron |
| ATCCAAACCTTCTAGATCAT+CGG | 0.494755 | 2.2:+29909153 | None:intergenic |
| TTGGAAGAACCTATGTAGTC+AGG | 0.494901 | 2.2:-29911718 | MS.gene83338:CDS |
| ACTAGGCAGCATTGCCCTCA+AGG | 0.499385 | 2.2:+29906944 | None:intergenic |
| GTGGCAGTTAAGCTTGGTGT+TGG | 0.509868 | 2.2:-29908048 | MS.gene83338:intron |
| GAAGCTCCCGATGATCTAGA+AGG | 0.514604 | 2.2:-29909160 | MS.gene83338:CDS |
| ACAGCTGCACTTATGTTGGC+TGG | 0.519457 | 2.2:+29907943 | None:intergenic |
| AGCTTTGCTGCATCATCAGT+TGG | 0.519628 | 2.2:-29911887 | MS.gene83338:intron |
| ACCAACAGCTGCACTTATGT+TGG | 0.521248 | 2.2:+29907939 | None:intergenic |
| CGTGTCCTTACATTTGGAAG+AGG | 0.521764 | 2.2:+29909670 | None:intergenic |
| GCTTTACTTCCGGGAAGTAT+GGG | 0.521974 | 2.2:-29907981 | MS.gene83338:CDS |
| AATAAAGACATTGGCCGAGT+TGG | 0.524082 | 2.2:+29909507 | None:intergenic |
| TGGTGTTGGAGGGTTTAGCA+TGG | 0.525161 | 2.2:-29908034 | MS.gene83338:CDS |
| ACCTTGAGTAACAAGTTACA+AGG | 0.525726 | 2.2:-29907800 | MS.gene83338:CDS |
| CTACACAATTCCAGAAGAAA+CGG | 0.532566 | 2.2:-29907001 | MS.gene83338:CDS |
| GCCTCGGTGATAATGGCTCC+AGG | 0.537078 | 2.2:-29911655 | MS.gene83338:intron |
| AACATCAAAATTGGGCCTTG+AGG | 0.541176 | 2.2:-29906959 | MS.gene83338:CDS |
| CCCTTGTAACTTGTTACTCA+AGG | 0.547923 | 2.2:+29907799 | None:intergenic |
| ATACTTCCCGGAAGTAAAGC+AGG | 0.551492 | 2.2:+29907984 | None:intergenic |
| ACCTTTAGGCCTGACTACAT+AGG | 0.553075 | 2.2:+29911709 | None:intergenic |
| AAACGGACGATGTTTGTGCT+TGG | 0.557700 | 2.2:-29906984 | MS.gene83338:CDS |
| GGTAAGAAACCTACTGTCTG+TGG | 0.558443 | 2.2:+29909090 | None:intergenic |
| TATTATTTCAGGTGATGATG+TGG | 0.558646 | 2.2:-29907215 | MS.gene83338:intron |
| GCAACTATAGTTTGGTTGCA+CGG | 0.566413 | 2.2:-29911677 | MS.gene83338:CDS |
| TTTCTTCTGGAATTGTGTAG+TGG | 0.572704 | 2.2:+29907004 | None:intergenic |
| GCAACCAAACTATAGTTGCT+TGG | 0.580548 | 2.2:+29911681 | None:intergenic |
| ATGTGTGTGGCAGTTAAGCT+TGG | 0.584859 | 2.2:-29908054 | MS.gene83338:intron |
| GCCAACATAAGTGCAGCTGT+TGG | 0.585194 | 2.2:-29907940 | MS.gene83338:CDS |
| ACTTCCGGGAAGTATGGGAA+TGG | 0.604302 | 2.2:-29907976 | MS.gene83338:CDS |
| AAGCCACCAAATAAAGACAT+TGG | 0.605790 | 2.2:+29909498 | None:intergenic |
| ATATGGACATACTTTGAACA+TGG | 0.609897 | 2.2:+29907901 | None:intergenic |
| ATGACACATCAAAATGGGAA+AGG | 0.628605 | 2.2:+29907748 | None:intergenic |
| GTAAGAAACCTACTGTCTGT+GGG | 0.636798 | 2.2:+29909091 | None:intergenic |
| AAAGGACTGAGCACGCCTCG+TGG | 0.645439 | 2.2:+29907766 | None:intergenic |
| CCTTGAGTAACAAGTTACAA+GGG | 0.647196 | 2.2:-29907799 | MS.gene83338:CDS |
| TATGTCCAACTGCTCCAACT+CGG | 0.665947 | 2.2:-29909521 | MS.gene83338:CDS |
| CTTGAGTAACAAGTTACAAG+GGG | 0.675390 | 2.2:-29907798 | MS.gene83338:CDS |
| ACCTGGAGCCATTATCACCG+AGG | 0.734493 | 2.2:+29911654 | None:intergenic |
| AAGGGGTAGATGAAGCCACG+AGG | 0.754925 | 2.2:-29907781 | MS.gene83338:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTATTTATAATTTTT+CGG | + | chr2.2:29911735-29911754 | None:intergenic | 0.0% |
| !! | ATAAATTATAATTAGAGAAA+AGG | + | chr2.2:29908892-29908911 | None:intergenic | 10.0% |
| !! | ATTTACAAATATATTATTTC+AGG | - | chr2.2:29911609-29911628 | MS.gene83338:intron | 10.0% |
| !!! | ATGAACAATTTATTATTTTT+AGG | - | chr2.2:29907308-29907327 | MS.gene83338:intron | 10.0% |
| !!! | ATGTTTTCATATAATAAATT+AGG | - | chr2.2:29909433-29909452 | MS.gene83338:intron | 10.0% |
| !! | AAATTTGGAAAAAACAAAAT+AGG | + | chr2.2:29907219-29907238 | None:intergenic | 15.0% |
| !! | ATCTTAAAATAACCTTAAAT+TGG | - | chr2.2:29909587-29909606 | MS.gene83338:intron | 15.0% |
| !! | ATTATAAGCAATTATTCAAA+AGG | + | chr2.2:29907418-29907437 | None:intergenic | 15.0% |
| !! | TAATTTATAATTATTCACGT+TGG | - | chr2.2:29907275-29907294 | MS.gene83338:intron | 15.0% |
| !! | TATTATTTGAACATCAATTT+CGG | + | chr2.2:29911438-29911457 | None:intergenic | 15.0% |
| !! | TTATAAGCAATTATTCAAAA+GGG | + | chr2.2:29907417-29907436 | None:intergenic | 15.0% |
| !!! | AAAATTCTTCTATTAGTTTT+CGG | - | chr2.2:29907248-29907267 | MS.gene83338:intron | 15.0% |
| !!! | AATGTATTTATTTGATTTGT+GGG | - | chr2.2:29907435-29907454 | MS.gene83338:intron | 15.0% |
| !!! | AATTTTAAAAATTGAACGTA+TGG | + | chr2.2:29910596-29910615 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAATTGAACGTAT+GGG | + | chr2.2:29910595-29910614 | None:intergenic | 15.0% |
| !!! | CAAAAAATTGACATTTTAAA+TGG | + | chr2.2:29911414-29911433 | None:intergenic | 15.0% |
| !!! | CTATCTCTTTTTATATTTTT+TGG | - | chr2.2:29908278-29908297 | MS.gene83338:intron | 15.0% |
| !!! | GATTCTAAAGATAAATAATT+TGG | + | chr2.2:29909227-29909246 | None:intergenic | 15.0% |
| !!! | TAATGTATTTATTTGATTTG+TGG | - | chr2.2:29907434-29907453 | MS.gene83338:intron | 15.0% |
| !!! | TTTTTTTTTTTCCTAAACAT+AGG | - | chr2.2:29910543-29910562 | MS.gene83338:intron | 15.0% |
| !! | AAAAAAAGAGAGTTAAATCA+GGG | + | chr2.2:29909116-29909135 | None:intergenic | 20.0% |
| !! | AAAAATTAATATGAAGCAAG+TGG | + | chr2.2:29911782-29911801 | None:intergenic | 20.0% |
| !! | AAACACATTCTTATTGTAAA+AGG | + | chr2.2:29907542-29907561 | None:intergenic | 20.0% |
| !! | AACACATTCTTATTGTAAAA+GGG | + | chr2.2:29907541-29907560 | None:intergenic | 20.0% |
| !! | AATATAAAAAGAGATAGTGA+TGG | + | chr2.2:29908275-29908294 | None:intergenic | 20.0% |
| !! | AATTTATCAAGACCAATTTA+AGG | + | chr2.2:29909602-29909621 | None:intergenic | 20.0% |
| !! | ATAATAACGATACTAATAAG+AGG | - | chr2.2:29908594-29908613 | MS.gene83338:intron | 20.0% |
| !! | TAACTTTCAAAGCTTATAAT+GGG | - | chr2.2:29911703-29911722 | MS.gene83338:CDS | 20.0% |
| !! | TATAAGCAATTATTCAAAAG+GGG | + | chr2.2:29907416-29907435 | None:intergenic | 20.0% |
| !! | TATAATAAATTAGGTGTATG+AGG | - | chr2.2:29909442-29909461 | MS.gene83338:intron | 20.0% |
| !! | TGAACTTAATTAAACATATG+TGG | - | chr2.2:29911157-29911176 | MS.gene83338:intron | 20.0% |
| !!! | AAATTCTTCTATTAGTTTTC+GGG | - | chr2.2:29907249-29907268 | MS.gene83338:intron | 20.0% |
| !!! | AATTTTCAGTCATACAAATT+TGG | + | chr2.2:29907234-29907253 | None:intergenic | 20.0% |
| !!! | ACTTGCTTCATATTAATTTT+TGG | - | chr2.2:29911781-29911800 | MS.gene83338:intron | 20.0% |
| !!! | ATGTATTTATTTGATTTGTG+GGG | - | chr2.2:29907436-29907455 | MS.gene83338:intron | 20.0% |
| !!! | CTTCATATTAATTTTTGGTT+TGG | - | chr2.2:29911786-29911805 | MS.gene83338:intron | 20.0% |
| !!! | TATCTTTAGAATCAATAAGA+TGG | - | chr2.2:29909234-29909253 | MS.gene83338:intron | 20.0% |
| !!! | TATTTTCATCAAAAGCAAAA+GGG | + | chr2.2:29910418-29910437 | None:intergenic | 20.0% |
| !!! | TTATATTTCTATTGTTGTCT+AGG | - | chr2.2:29911012-29911031 | MS.gene83338:intron | 20.0% |
| ! | AATTACACGCATAATCAAAA+TGG | + | chr2.2:29906994-29907013 | None:intergenic | 25.0% |
| ! | ACATAGTTATCTTTACTTCA+GGG | - | chr2.2:29908176-29908195 | MS.gene83338:intron | 25.0% |
| ! | AGCATTAACAGATAAAATTC+AGG | + | chr2.2:29909769-29909788 | None:intergenic | 25.0% |
| ! | AGTATCGTTATTATGAGATT+CGG | + | chr2.2:29908588-29908607 | None:intergenic | 25.0% |
| ! | AGTTAAAGAGAAATAGTGAT+GGG | + | chr2.2:29908428-29908447 | None:intergenic | 25.0% |
| ! | ATAACTCATTAACCATTAAC+TGG | - | chr2.2:29911201-29911220 | MS.gene83338:intron | 25.0% |
| ! | ATCAACATAAGAAAAATGCT+AGG | + | chr2.2:29909970-29909989 | None:intergenic | 25.0% |
| ! | ATTAAATCACCTATGTTTCA+TGG | + | chr2.2:29911572-29911591 | None:intergenic | 25.0% |
| ! | ATTCTTATTGTAAAAGGGAA+GGG | + | chr2.2:29907536-29907555 | None:intergenic | 25.0% |
| ! | CAAAAAAAGAGAGTTAAATC+AGG | + | chr2.2:29909117-29909136 | None:intergenic | 25.0% |
| ! | CAGTTTATAGAATGTAATTG+TGG | + | chr2.2:29911515-29911534 | None:intergenic | 25.0% |
| ! | CATAGGTGATTTAATGTAAA+TGG | - | chr2.2:29911577-29911596 | MS.gene83338:intron | 25.0% |
| ! | CATTGACATACATAACTAAA+AGG | + | chr2.2:29910143-29910162 | None:intergenic | 25.0% |
| ! | CCAAATAATTATGCTAACTA+GGG | - | chr2.2:29908030-29908049 | MS.gene83338:CDS | 25.0% |
| ! | CCTAGTTAGCATAATTATTT+GGG | + | chr2.2:29908032-29908051 | None:intergenic | 25.0% |
| ! | GTAACTTTCAAAGCTTATAA+TGG | - | chr2.2:29911702-29911721 | MS.gene83338:CDS | 25.0% |
| ! | TAACTCATTAACCATTAACT+GGG | - | chr2.2:29911202-29911221 | MS.gene83338:intron | 25.0% |
| ! | TCATTTATATCCATCAACAT+TGG | + | chr2.2:29908490-29908509 | None:intergenic | 25.0% |
| ! | TGATAATATAGCAGTTAGTT+CGG | - | chr2.2:29908068-29908087 | MS.gene83338:intron | 25.0% |
| ! | TGTTGTAAAAACCTATGTTT+AGG | + | chr2.2:29910557-29910576 | None:intergenic | 25.0% |
| ! | TTTCCATATTTAGTAATGCT+TGG | - | chr2.2:29909522-29909541 | MS.gene83338:CDS | 25.0% |
| !! | AACATAGGTTTTTACAACAA+CGG | - | chr2.2:29910558-29910577 | MS.gene83338:intron | 25.0% |
| !! | ACAATAAGAATGTGTTTTGT+TGG | - | chr2.2:29907545-29907564 | MS.gene83338:intron | 25.0% |
| !! | CTATTTTCATCAAAAGCAAA+AGG | + | chr2.2:29910419-29910438 | None:intergenic | 25.0% |
| !! | GTTTTACGTATCTCTTTTAA+TGG | + | chr2.2:29909016-29909035 | None:intergenic | 25.0% |
| !! | TTATTATTTGGGATCTCTTA+CGG | - | chr2.2:29907041-29907060 | MS.gene83338:intron | 25.0% |
| !! | TTATTTCATATCACCTTTTG+AGG | + | chr2.2:29908655-29908674 | None:intergenic | 25.0% |
| !! | TTGATTATGCGTGTAATTTT+CGG | - | chr2.2:29906996-29907015 | MS.gene83338:CDS | 25.0% |
| !!! | ATTTTGCTATACTTATGCTT+CGG | - | chr2.2:29910227-29910246 | MS.gene83338:intron | 25.0% |
| !!! | CAATAAGAATGTGTTTTGTT+GGG | - | chr2.2:29907546-29907565 | MS.gene83338:intron | 25.0% |
| !!! | GTTCTTTTTGTATTAGTCTA+AGG | - | chr2.2:29910172-29910191 | MS.gene83338:intron | 25.0% |
| !!! | TGAAATAGTTCTGCAATTTT+TGG | - | chr2.2:29908129-29908148 | MS.gene83338:intron | 25.0% |
| !!! | TGTATGTTTGATTGTTTTGT+AGG | - | chr2.2:29909373-29909392 | MS.gene83338:intron | 25.0% |
| !!! | TTTGCTTTTGATGAAAATAG+TGG | - | chr2.2:29910419-29910438 | MS.gene83338:intron | 25.0% |
| AAAAATTGAACGTATGGGTA+TGG | + | chr2.2:29910590-29910609 | None:intergenic | 30.0% | |
| AAAATTGAACGTATGGGTAT+GGG | + | chr2.2:29910589-29910608 | None:intergenic | 30.0% | |
| AACAAACACAGAAAATATGC+TGG | - | chr2.2:29910025-29910044 | MS.gene83338:intron | 30.0% | |
| AAGTTGAAGACAATAATCAG+AGG | + | chr2.2:29909403-29909422 | None:intergenic | 30.0% | |
| AATACCCGAGATAAGTTATT+TGG | + | chr2.2:29910100-29910119 | None:intergenic | 30.0% | |
| AATGCCAATTTGATGCTTTA+CGG | - | chr2.2:29909053-29909072 | MS.gene83338:intron | 30.0% | |
| ACATAACTAAAAGGTTAGAC+AGG | + | chr2.2:29910134-29910153 | None:intergenic | 30.0% | |
| ACATTGCATAATATATGCAG+GGG | + | chr2.2:29908376-29908395 | None:intergenic | 30.0% | |
| ACTCCAAGCATTACTAAATA+TGG | + | chr2.2:29909528-29909547 | None:intergenic | 30.0% | |
| AGCAACTTAGTTGTAAAAAG+AGG | - | chr2.2:29908095-29908114 | MS.gene83338:intron | 30.0% | |
| AGGTGATTTAATGTAAATGG+TGG | - | chr2.2:29911580-29911599 | MS.gene83338:intron | 30.0% | |
| ATACCCGAGATAAGTTATTT+GGG | + | chr2.2:29910099-29910118 | None:intergenic | 30.0% | |
| ATTGCCCAAATAACTTATCT+CGG | - | chr2.2:29910092-29910111 | MS.gene83338:intron | 30.0% | |
| CATTCTTATTGTAAAAGGGA+AGG | + | chr2.2:29907537-29907556 | None:intergenic | 30.0% | |
| CCCAAATAATTATGCTAACT+AGG | - | chr2.2:29908029-29908048 | MS.gene83338:CDS | 30.0% | |
| CCCTAGTTAGCATAATTATT+TGG | + | chr2.2:29908033-29908052 | None:intergenic | 30.0% | |
| GACATAGTTATCTTTACTTC+AGG | - | chr2.2:29908175-29908194 | MS.gene83338:intron | 30.0% | |
| GACATTGCATAATATATGCA+GGG | + | chr2.2:29908377-29908396 | None:intergenic | 30.0% | |
| GAGATACGTAAAACTTCAAA+CGG | - | chr2.2:29909022-29909041 | MS.gene83338:intron | 30.0% | |
| GAGTTAAAGAGAAATAGTGA+TGG | + | chr2.2:29908429-29908448 | None:intergenic | 30.0% | |
| GCAACTTAGTTGTAAAAAGA+GGG | - | chr2.2:29908096-29908115 | MS.gene83338:intron | 30.0% | |
| TAAAACTTCAAACGGATAAC+AGG | - | chr2.2:29909030-29909049 | MS.gene83338:intron | 30.0% | |
| TTTCAATTCTGATATGTGTG+TGG | - | chr2.2:29910768-29910787 | MS.gene83338:intron | 30.0% | |
| TTTCCATGACACATCAAAAT+GGG | + | chr2.2:29911095-29911114 | None:intergenic | 30.0% | |
| TTTGTGTGATGCAGATTAAA+TGG | - | chr2.2:29909290-29909309 | MS.gene83338:intron | 30.0% | |
| ! | GAGTTCTCGTGTTATTATTT+GGG | - | chr2.2:29907030-29907049 | MS.gene83338:intron | 30.0% |
| ! | GCTAGAAATTCACCTTTTTA+AGG | - | chr2.2:29908316-29908335 | MS.gene83338:intron | 30.0% |
| ! | TATTATTTCAGGTGATGATG+TGG | - | chr2.2:29911620-29911639 | MS.gene83338:intron | 30.0% |
| ! | TGAAACTATCTCTTCCATTT+TGG | + | chr2.2:29907462-29907481 | None:intergenic | 30.0% |
| ! | TGATTATGCGTGTAATTTTC+GGG | - | chr2.2:29906997-29907016 | MS.gene83338:CDS | 30.0% |
| ! | TTTTCCATGACACATCAAAA+TGG | + | chr2.2:29911096-29911115 | None:intergenic | 30.0% |
| !! | ATTTTGATGTGTCATGGAAA+AGG | - | chr2.2:29911095-29911114 | MS.gene83338:intron | 30.0% |
| !! | GTTTGGTTCTTACACATTAT+AGG | - | chr2.2:29911803-29911822 | MS.gene83338:intron | 30.0% |
| !! | TTTTTGGTCAAATAGCCTAA+TGG | - | chr2.2:29908294-29908313 | MS.gene83338:intron | 30.0% |
| !!! | ACCTTTTTAAGGTGAATAAG+TGG | - | chr2.2:29908327-29908346 | MS.gene83338:intron | 30.0% |
| !!! | CCTTTTTAAGGTGAATAAGT+GGG | - | chr2.2:29908328-29908347 | MS.gene83338:intron | 30.0% |
| !!! | CTTTTTAAGGTGAATAAGTG+GGG | - | chr2.2:29908329-29908348 | MS.gene83338:intron | 30.0% |
| !!! | TAACTCTCTTTTTTTGCAGT+TGG | - | chr2.2:29909121-29909140 | MS.gene83338:CDS | 30.0% |
| !!! | TAGTTCTGCAATTTTTGGTT+AGG | - | chr2.2:29908134-29908153 | MS.gene83338:intron | 30.0% |
| !!! | TGAACTTTTTGACTTGTGAT+AGG | - | chr2.2:29907986-29908005 | MS.gene83338:CDS | 30.0% |
| AACACCAAGCAACTATAGTT+TGG | - | chr2.2:29907150-29907169 | MS.gene83338:CDS | 35.0% | |
| AAGAAAAAAGTTTGCACGAG+AGG | - | chr2.2:29907750-29907769 | MS.gene83338:CDS | 35.0% | |
| AAGAAAAATGACAAGTGACC+AGG | - | chr2.2:29907802-29907821 | MS.gene83338:CDS | 35.0% | |
| AAGCCACCAAATAAAGACAT+TGG | + | chr2.2:29909340-29909359 | None:intergenic | 35.0% | |
| AATGGTATGGGTACGAAATA+CGG | + | chr2.2:29910621-29910640 | None:intergenic | 35.0% | |
| ACACAAGATGTTCTATTGCA+TGG | + | chr2.2:29907598-29907617 | None:intergenic | 35.0% | |
| ACCTTGAGTAACAAGTTACA+AGG | - | chr2.2:29911035-29911054 | MS.gene83338:intron | 35.0% | |
| AGGATTTACCTATGATGCAT+AGG | + | chr2.2:29910663-29910682 | None:intergenic | 35.0% | |
| ATAAATGAAGCTCACATGGT+GGG | - | chr2.2:29908502-29908521 | MS.gene83338:intron | 35.0% | |
| ATAGGTAATGTCATATCACC+TGG | + | chr2.2:29907201-29907220 | None:intergenic | 35.0% | |
| ATCCAAACCTTCTAGATCAT+CGG | + | chr2.2:29909685-29909704 | None:intergenic | 35.0% | |
| ATCTAACACTCTCTCCAATT+GGG | + | chr2.2:29909935-29909954 | None:intergenic | 35.0% | |
| ATCTGCATCACACAAATCAA+CGG | + | chr2.2:29909286-29909305 | None:intergenic | 35.0% | |
| ATGACACATCAAAATGGGAA+AGG | + | chr2.2:29911090-29911109 | None:intergenic | 35.0% | |
| ATGATGCATAGGTACAAGTA+CGG | + | chr2.2:29910652-29910671 | None:intergenic | 35.0% | |
| CAAAATGCATTCAATGAACG+AGG | - | chr2.2:29909550-29909569 | MS.gene83338:intron | 35.0% | |
| CAATTTCAGATGATGTTGGA+AGG | - | chr2.2:29910683-29910702 | MS.gene83338:intron | 35.0% | |
| CCCACTTATTCACCTTAAAA+AGG | + | chr2.2:29908331-29908350 | None:intergenic | 35.0% | |
| CCTTGAGTAACAAGTTACAA+GGG | - | chr2.2:29911036-29911055 | MS.gene83338:intron | 35.0% | |
| CTAACACTCACTCTCTTATT+GGG | - | chr2.2:29909839-29909858 | MS.gene83338:intron | 35.0% | |
| CTAAGACACGCTTGTAAAAT+GGG | + | chr2.2:29907666-29907685 | None:intergenic | 35.0% | |
| CTACACAATTCCAGAAGAAA+CGG | - | chr2.2:29911834-29911853 | MS.gene83338:intron | 35.0% | |
| CTTGAGTAACAAGTTACAAG+GGG | - | chr2.2:29911037-29911056 | MS.gene83338:intron | 35.0% | |
| GATAGTGACTATTGCTTACA+AGG | - | chr2.2:29908848-29908867 | MS.gene83338:intron | 35.0% | |
| GATTTCTCACCAAACTTGTA+GGG | + | chr2.2:29911648-29911667 | None:intergenic | 35.0% | |
| GCTTGGCTAACATCAAAATT+GGG | - | chr2.2:29911868-29911887 | MS.gene83338:intron | 35.0% | |
| GGACATTGCATAATATATGC+AGG | + | chr2.2:29908378-29908397 | None:intergenic | 35.0% | |
| GGATATAAATGAAGCTCACA+TGG | - | chr2.2:29908498-29908517 | MS.gene83338:intron | 35.0% | |
| GGCTAATAAAGTTCAGTAGA+CGG | - | chr2.2:29911329-29911348 | MS.gene83338:intron | 35.0% | |
| GGCTGTAGTTATTGTGTATT+AGG | + | chr2.2:29908567-29908586 | None:intergenic | 35.0% | |
| GGTAAGTGAGATATCAAGAT+TGG | - | chr2.2:29911178-29911197 | MS.gene83338:intron | 35.0% | |
| GTTCTTACACATTATAGGCT+TGG | - | chr2.2:29911808-29911827 | MS.gene83338:intron | 35.0% | |
| TACTTGTACCTATGCATCAT+AGG | - | chr2.2:29910652-29910671 | MS.gene83338:intron | 35.0% | |
| TATAAATGAAGCTCACATGG+TGG | - | chr2.2:29908501-29908520 | MS.gene83338:intron | 35.0% | |
| TATCTAACACTCTCTCCAAT+TGG | + | chr2.2:29909936-29909955 | None:intergenic | 35.0% | |
| TATGTCTTCTCAAACCTCTA+AGG | + | chr2.2:29908161-29908180 | None:intergenic | 35.0% | |
| TCAAACATACAAGCAGTAGA+TGG | + | chr2.2:29909364-29909383 | None:intergenic | 35.0% | |
| TCCTCAATTTCAGATGATGT+TGG | - | chr2.2:29910679-29910698 | MS.gene83338:intron | 35.0% | |
| TCTAACACTCACTCTCTTAT+TGG | - | chr2.2:29909838-29909857 | MS.gene83338:intron | 35.0% | |
| TCTGACGTAATTCGTATTTG+TGG | - | chr2.2:29909789-29909808 | MS.gene83338:intron | 35.0% | |
| TGATGCGCTGAAGTAAAATA+TGG | + | chr2.2:29910954-29910973 | None:intergenic | 35.0% | |
| TGATTTCTCACCAAACTTGT+AGG | + | chr2.2:29911649-29911668 | None:intergenic | 35.0% | |
| TGCATTTGATTAGAAACAGC+AGG | + | chr2.2:29908988-29909007 | None:intergenic | 35.0% | |
| TGCTTGGCTAACATCAAAAT+TGG | - | chr2.2:29911867-29911886 | MS.gene83338:intron | 35.0% | |
| TGGTTTACAGTAGGTTAATC+AGG | - | chr2.2:29907884-29907903 | MS.gene83338:intron | 35.0% | |
| TGTTCATCTCTACATGTTGT+TGG | + | chr2.2:29911276-29911295 | None:intergenic | 35.0% | |
| TTAGGAAGCAGCTATATACT+AGG | + | chr2.2:29908549-29908568 | None:intergenic | 35.0% | |
| TTATTGGGTGAAATCCATGT+GGG | - | chr2.2:29909854-29909873 | MS.gene83338:intron | 35.0% | |
| TTCGTACCCATACCATTATT+GGG | - | chr2.2:29910624-29910643 | MS.gene83338:intron | 35.0% | |
| TTGCCCAAATAACTTATCTC+GGG | - | chr2.2:29910093-29910112 | MS.gene83338:intron | 35.0% | |
| TTTCAAGACAGAAACCAAAC+AGG | - | chr2.2:29907477-29907496 | MS.gene83338:intron | 35.0% | |
| TTTCGTACCCATACCATTAT+TGG | - | chr2.2:29910623-29910642 | MS.gene83338:intron | 35.0% | |
| ! | ATTTCTCTCTGGTTTACAGT+AGG | - | chr2.2:29907875-29907894 | MS.gene83338:intron | 35.0% |
| ! | GAATTTTCAGATTTCCTCCA+TGG | - | chr2.2:29908728-29908747 | MS.gene83338:intron | 35.0% |
| ! | GGAGTTCTCGTGTTATTATT+TGG | - | chr2.2:29907029-29907048 | MS.gene83338:intron | 35.0% |
| ! | TCCAACATCATCTGAAATTG+AGG | + | chr2.2:29910683-29910702 | None:intergenic | 35.0% |
| ! | TTGGGAATCAAACTAGTTCT+CGG | + | chr2.2:29908766-29908785 | None:intergenic | 35.0% |
| ! | TTTTTGCTGCCATGAAACAT+AGG | - | chr2.2:29911560-29911579 | MS.gene83338:intron | 35.0% |
| !! | AAGGTGAATTTCTAGCCATT+AGG | + | chr2.2:29908312-29908331 | None:intergenic | 35.0% |
| !! | ATTGGCTCTACCTCAAATTT+AGG | + | chr2.2:29908472-29908491 | None:intergenic | 35.0% |
| !! | CATATCACCTTTTGAGGAAA+AGG | + | chr2.2:29908649-29908668 | None:intergenic | 35.0% |
| !! | GATTAATCACGTTTAGCTTG+TGG | - | chr2.2:29911308-29911327 | MS.gene83338:intron | 35.0% |
| !! | TTTCCCATTTTGATGTGTCA+TGG | - | chr2.2:29911089-29911108 | MS.gene83338:intron | 35.0% |
| !! | TTTCTTCTGGAATTGTGTAG+TGG | + | chr2.2:29911834-29911853 | None:intergenic | 35.0% |
| !!! | ATGTCTTTTAGGGTTTGATG+TGG | - | chr2.2:29909638-29909657 | MS.gene83338:intron | 35.0% |
| !!! | ATTTTTGGTTAGGACCTTAG+AGG | - | chr2.2:29908144-29908163 | MS.gene83338:intron | 35.0% |
| !!! | GGATGACTGTTGTTTTTATC+AGG | - | chr2.2:29907065-29907084 | MS.gene83338:intron | 35.0% |
| !!! | GTAATTTTCGGGTGTAACTT+CGG | - | chr2.2:29907008-29907027 | MS.gene83338:CDS | 35.0% |
| !!! | TGACTGTTGTTTTTATCAGG+TGG | - | chr2.2:29907068-29907087 | MS.gene83338:intron | 35.0% |
| !!! | TTACGGTGGTTTTAATGTTG+TGG | - | chr2.2:29909070-29909089 | MS.gene83338:intron | 35.0% |
| AAAGCAGGATGCAGAGTAAA+GGG | + | chr2.2:29910839-29910858 | None:intergenic | 40.0% | |
| AAAGTTTGCACGAGAGGATT+TGG | - | chr2.2:29907756-29907775 | MS.gene83338:CDS | 40.0% | |
| AACATCAAAATTGGGCCTTG+AGG | - | chr2.2:29911876-29911895 | MS.gene83338:intron | 40.0% | |
| AAGCATGGGTACTCCTAAAA+TGG | - | chr2.2:29910271-29910290 | MS.gene83338:intron | 40.0% | |
| AAGGACACGACTTTGATTGT+TGG | - | chr2.2:29909179-29909198 | MS.gene83338:CDS | 40.0% | |
| AATAAAGACATTGGCCGAGT+TGG | + | chr2.2:29909331-29909350 | None:intergenic | 40.0% | |
| AATATAACACCAGCAGCATG+AGG | + | chr2.2:29907933-29907952 | None:intergenic | 40.0% | |
| ACAAGTACGGTACCCAATAA+TGG | + | chr2.2:29910639-29910658 | None:intergenic | 40.0% | |
| ACATCAAAATTGGGCCTTGA+GGG | - | chr2.2:29911877-29911896 | MS.gene83338:intron | 40.0% | |
| ACGGTACCCAATAATGGTAT+GGG | + | chr2.2:29910633-29910652 | None:intergenic | 40.0% | |
| ACTAGGTTGCAGTTATGTAC+TGG | + | chr2.2:29908532-29908551 | None:intergenic | 40.0% | |
| ACTCGGCCAATGTCTTTATT+TGG | - | chr2.2:29909331-29909350 | MS.gene83338:intron | 40.0% | |
| AGAGGGAAAGAGAAGGATAA+TGG | - | chr2.2:29907696-29907715 | MS.gene83338:intron | 40.0% | |
| AGTAGGTTAATCAGGTTTCG+AGG | - | chr2.2:29907892-29907911 | MS.gene83338:intron | 40.0% | |
| ATGCATGATTCATGCTAGGA+GGG | - | chr2.2:29907842-29907861 | MS.gene83338:intron | 40.0% | |
| CAAAGTCGTGTCCTTACATT+TGG | + | chr2.2:29909174-29909193 | None:intergenic | 40.0% | |
| CATGATAGTTGCAATGCAAC+CGG | - | chr2.2:29908682-29908701 | MS.gene83338:intron | 40.0% | |
| CCTAAGACACGCTTGTAAAA+TGG | + | chr2.2:29907667-29907686 | None:intergenic | 40.0% | |
| CCTCATAACTTACTGGTGAA+AGG | - | chr2.2:29907362-29907381 | MS.gene83338:intron | 40.0% | |
| CCTTTCACCAGTAAGTTATG+AGG | + | chr2.2:29907365-29907384 | None:intergenic | 40.0% | |
| CTCTTCCTCTTCCAAATGTA+AGG | - | chr2.2:29909160-29909179 | MS.gene83338:CDS | 40.0% | |
| CTTATCTCGGGTATTTACCA+CGG | - | chr2.2:29910105-29910124 | MS.gene83338:intron | 40.0% | |
| CTTATTGGGTGAAATCCATG+TGG | - | chr2.2:29909853-29909872 | MS.gene83338:intron | 40.0% | |
| GAAATGGGTCCCAAATAAAG+TGG | - | chr2.2:29909889-29909908 | MS.gene83338:intron | 40.0% | |
| GAAGCATGATGATAGATGTG+TGG | - | chr2.2:29910470-29910489 | MS.gene83338:intron | 40.0% | |
| GACAGATATGAAAGCCTGTT+TGG | + | chr2.2:29907494-29907513 | None:intergenic | 40.0% | |
| GAGGGAAAGAGAAGGATAAT+GGG | - | chr2.2:29907697-29907716 | MS.gene83338:intron | 40.0% | |
| GCAACCAAACTATAGTTGCT+TGG | + | chr2.2:29907157-29907176 | None:intergenic | 40.0% | |
| GCAACTATAGTTTGGTTGCA+CGG | - | chr2.2:29907158-29907177 | MS.gene83338:CDS | 40.0% | |
| GCTTAATTGAGCCCAGTTAA+TGG | + | chr2.2:29911216-29911235 | None:intergenic | 40.0% | |
| GGGTTCTGTAGACAACAAAT+TGG | + | chr2.2:29909727-29909746 | None:intergenic | 40.0% | |
| GGTATGAGATGATTTCTCTC+TGG | - | chr2.2:29907864-29907883 | MS.gene83338:intron | 40.0% | |
| GTAAGAAACCTACTGTCTGT+GGG | + | chr2.2:29909747-29909766 | None:intergenic | 40.0% | |
| GTCTTACCTGCCTAAATTTG+AGG | - | chr2.2:29908459-29908478 | MS.gene83338:intron | 40.0% | |
| GTCTTAGGATAGGGAAAAGA+GGG | - | chr2.2:29907679-29907698 | MS.gene83338:intron | 40.0% | |
| TAAAGCAGGATGCAGAGTAA+AGG | + | chr2.2:29910840-29910859 | None:intergenic | 40.0% | |
| TAAATGAAGCTCACATGGTG+GGG | - | chr2.2:29908503-29908522 | MS.gene83338:intron | 40.0% | |
| TAACAAAAGAAAGCCCCTGT+AGG | + | chr2.2:29908223-29908242 | None:intergenic | 40.0% | |
| TACAAGCGTGTCTTAGGATA+GGG | - | chr2.2:29907670-29907689 | MS.gene83338:intron | 40.0% | |
| TACCAACTGAGTTAAGCTCA+CGG | - | chr2.2:29908399-29908418 | MS.gene83338:intron | 40.0% | |
| TACGGTACCCAATAATGGTA+TGG | + | chr2.2:29910634-29910653 | None:intergenic | 40.0% | |
| TAGATGTGTGGTTAAACACG+TGG | - | chr2.2:29910482-29910501 | MS.gene83338:intron | 40.0% | |
| TCCAAACCTTCTAGATCATC+GGG | + | chr2.2:29909684-29909703 | None:intergenic | 40.0% | |
| TCCCTAGTGGCTTCAAAATT+CGG | - | chr2.2:29908706-29908725 | MS.gene83338:intron | 40.0% | |
| TGTCTTAGGATAGGGAAAAG+AGG | - | chr2.2:29907678-29907697 | MS.gene83338:intron | 40.0% | |
| TGTGAATCCCTCTTAAGCAT+GGG | - | chr2.2:29910257-29910276 | MS.gene83338:intron | 40.0% | |
| TTACAAGCGTGTCTTAGGAT+AGG | - | chr2.2:29907669-29907688 | MS.gene83338:intron | 40.0% | |
| TTCACCAGTAAGTTATGAGG+TGG | + | chr2.2:29907362-29907381 | None:intergenic | 40.0% | |
| TTCTCCACCTCATAACTTAC+TGG | - | chr2.2:29907355-29907374 | MS.gene83338:intron | 40.0% | |
| TTGGAAGAACCTATGTAGTC+AGG | - | chr2.2:29907117-29907136 | MS.gene83338:intron | 40.0% | |
| ! | ACCACCGTAAAGCATCAAAT+TGG | + | chr2.2:29909060-29909079 | None:intergenic | 40.0% |
| ! | ACTGCGACTCTATGTCTTTT+AGG | - | chr2.2:29909627-29909646 | MS.gene83338:intron | 40.0% |
| ! | AGCATCACCTTTTCCTCAAA+AGG | - | chr2.2:29908639-29908658 | MS.gene83338:intron | 40.0% |
| ! | CAAACTAGTTCTCGGAGTAA+TGG | + | chr2.2:29908758-29908777 | None:intergenic | 40.0% |
| ! | CCATTTTACAAGCGTGTCTT+AGG | - | chr2.2:29907664-29907683 | MS.gene83338:intron | 40.0% |
| ! | CTGCGACTCTATGTCTTTTA+GGG | - | chr2.2:29909628-29909647 | MS.gene83338:intron | 40.0% |
| ! | GAAAAGGTGATGCTTTTGTG+AGG | + | chr2.2:29908633-29908652 | None:intergenic | 40.0% |
| ! | GGGTACCATACTTTGGAAAT+GGG | - | chr2.2:29909874-29909893 | MS.gene83338:intron | 40.0% |
| ! | TACGGGTACTTCACCATTTT+AGG | + | chr2.2:29910287-29910306 | None:intergenic | 40.0% |
| ! | TCGAAGTGCTTGACTTCTAA+TGG | - | chr2.2:29911669-29911688 | MS.gene83338:CDS | 40.0% |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | + | chr2.2:29908399-29908418 | None:intergenic | 40.0% |
| ! | TGGGTACCATACTTTGGAAA+TGG | - | chr2.2:29909873-29909892 | MS.gene83338:intron | 40.0% |
| ! | TGGGTCTCACCACTTTATTT+GGG | + | chr2.2:29909901-29909920 | None:intergenic | 40.0% |
| ! | TTATTTGGGATCTCTTACGG+TGG | - | chr2.2:29907044-29907063 | MS.gene83338:intron | 40.0% |
| ! | TTTTCAGATTTCCTCCATGG+TGG | - | chr2.2:29908731-29908750 | MS.gene83338:intron | 40.0% |
| !! | ATTTGGTTTGAAGAGGGAGT+TGG | - | chr2.2:29907773-29907792 | MS.gene83338:CDS | 40.0% |
| !! | CCCTTGTAACTTGTTACTCA+AGG | + | chr2.2:29911039-29911058 | None:intergenic | 40.0% |
| !! | GAGAGGATTTGGTTTGAAGA+GGG | - | chr2.2:29907767-29907786 | MS.gene83338:CDS | 40.0% |
| !! | GATGAAAATAGTGGATTCGC+TGG | - | chr2.2:29910428-29910447 | MS.gene83338:intron | 40.0% |
| !! | GTTGCTTGGTGTTTACCTTT+AGG | + | chr2.2:29907143-29907162 | None:intergenic | 40.0% |
| !! | TGTGATAGGACACTGACTTT+GGG | - | chr2.2:29908000-29908019 | MS.gene83338:CDS | 40.0% |
| !! | TTGTGATAGGACACTGACTT+TGG | - | chr2.2:29907999-29908018 | MS.gene83338:CDS | 40.0% |
| !! | TTTGATTTGTGGGGCCAAAA+TGG | - | chr2.2:29907445-29907464 | MS.gene83338:intron | 40.0% |
| !!! | TCCGAATTTTGAAGCCACTA+GGG | + | chr2.2:29908710-29908729 | None:intergenic | 40.0% |
| !!! | TTCCGAATTTTGAAGCCACT+AGG | + | chr2.2:29908711-29908730 | None:intergenic | 40.0% |
| AAACGGACGATGTTTGTGCT+TGG | - | chr2.2:29911851-29911870 | MS.gene83338:intron | 45.0% | |
| AAAGGTTAGACAGGTATCCG+TGG | + | chr2.2:29910125-29910144 | None:intergenic | 45.0% | |
| ACCAACAGCTGCACTTATGT+TGG | + | chr2.2:29910899-29910918 | None:intergenic | 45.0% | |
| ACCAACTGAGTTAAGCTCAC+GGG | - | chr2.2:29908400-29908419 | MS.gene83338:intron | 45.0% | |
| ACCGCTATTGCAGTGTTTAG+CGG | + | chr2.2:29908810-29908829 | None:intergenic | 45.0% | |
| ACCTATGTAGTCAGGCCTAA+AGG | - | chr2.2:29907125-29907144 | MS.gene83338:intron | 45.0% | |
| ACCTTTAGGCCTGACTACAT+AGG | + | chr2.2:29907129-29907148 | None:intergenic | 45.0% | |
| ACTTCAGGGAGCTTAGCTAT+GGG | - | chr2.2:29908190-29908209 | MS.gene83338:intron | 45.0% | |
| AGCTTTGCTGCATCATCAGT+TGG | - | chr2.2:29906948-29906967 | MS.gene83338:CDS | 45.0% | |
| AGGGAAAAGAGGGAAAGAGA+AGG | - | chr2.2:29907689-29907708 | MS.gene83338:intron | 45.0% | |
| AGGTTAATCAGGTTTCGAGG+AGG | - | chr2.2:29907895-29907914 | MS.gene83338:intron | 45.0% | |
| ATACTTCCCGGAAGTAAAGC+AGG | + | chr2.2:29910854-29910873 | None:intergenic | 45.0% | |
| ATGTGTGTGGCAGTTAAGCT+TGG | - | chr2.2:29910781-29910800 | MS.gene83338:intron | 45.0% | |
| ATTGCCATTCCCATACTTCC+CGG | + | chr2.2:29910866-29910885 | None:intergenic | 45.0% | |
| CAAACATCGTCCGTTTCTTC+TGG | + | chr2.2:29911847-29911866 | None:intergenic | 45.0% | |
| CAATTGGGTGAAACTCGTGT+GGG | + | chr2.2:29909920-29909939 | None:intergenic | 45.0% | |
| CGGTTGCATTGCAACTATCA+TGG | + | chr2.2:29908684-29908703 | None:intergenic | 45.0% | |
| CGTGTCCTTACATTTGGAAG+AGG | + | chr2.2:29909168-29909187 | None:intergenic | 45.0% | |
| CTATGGGATTACAGCCTACA+GGG | - | chr2.2:29908206-29908225 | MS.gene83338:intron | 45.0% | |
| GACACGACTTTGATTGTTGG+AGG | - | chr2.2:29909182-29909201 | MS.gene83338:CDS | 45.0% | |
| GAGGATGCATGATTCATGCT+AGG | - | chr2.2:29907838-29907857 | MS.gene83338:intron | 45.0% | |
| GATGCATGATTCATGCTAGG+AGG | - | chr2.2:29907841-29907860 | MS.gene83338:intron | 45.0% | |
| GATGTGGTTCCCTACAAGTT+TGG | - | chr2.2:29911636-29911655 | MS.gene83338:intron | 45.0% | |
| GCCAATTTGATGCTTTACGG+TGG | - | chr2.2:29909056-29909075 | MS.gene83338:intron | 45.0% | |
| GCTCTACCTCAAATTTAGGC+AGG | + | chr2.2:29908468-29908487 | None:intergenic | 45.0% | |
| GCTGCAACAGCATATGAGTT+TGG | - | chr2.2:29907098-29907117 | MS.gene83338:intron | 45.0% | |
| GGTAAGAAACCTACTGTCTG+TGG | + | chr2.2:29909748-29909767 | None:intergenic | 45.0% | |
| GTGAGCTTAACTCAGTTGGT+AGG | + | chr2.2:29908400-29908419 | None:intergenic | 45.0% | |
| GTGGGTCTCACCACTTTATT+TGG | + | chr2.2:29909902-29909921 | None:intergenic | 45.0% | |
| GTGTGAATCCCTCTTAAGCA+TGG | - | chr2.2:29910256-29910275 | MS.gene83338:intron | 45.0% | |
| TACTTCAGGGAGCTTAGCTA+TGG | - | chr2.2:29908189-29908208 | MS.gene83338:intron | 45.0% | |
| TATGGGATTACAGCCTACAG+GGG | - | chr2.2:29908207-29908226 | MS.gene83338:intron | 45.0% | |
| TATGTCCAACTGCTCCAACT+CGG | - | chr2.2:29909314-29909333 | MS.gene83338:intron | 45.0% | |
| TCCAAAGTATGGTACCCACA+TGG | + | chr2.2:29909871-29909890 | None:intergenic | 45.0% | |
| TCCATGTGGGTACCATACTT+TGG | - | chr2.2:29909867-29909886 | MS.gene83338:intron | 45.0% | |
| TCCCGATGATCTAGAAGGTT+TGG | - | chr2.2:29909680-29909699 | MS.gene83338:intron | 45.0% | |
| TCCGCTAAACACTGCAATAG+CGG | - | chr2.2:29908806-29908825 | MS.gene83338:intron | 45.0% | |
| TCTGCATCCTGCTTTACTTC+CGG | - | chr2.2:29910844-29910863 | MS.gene83338:intron | 45.0% | |
| TGAGGTAGAGCCAATGTTGA+TGG | - | chr2.2:29908477-29908496 | MS.gene83338:intron | 45.0% | |
| TGCATAATATATGCAGGGGC+CGG | + | chr2.2:29908372-29908391 | None:intergenic | 45.0% | |
| TGCATGATTCATGCTAGGAG+GGG | - | chr2.2:29907843-29907862 | MS.gene83338:intron | 45.0% | |
| TGCTTTACTTCCGGGAAGTA+TGG | - | chr2.2:29910853-29910872 | MS.gene83338:intron | 45.0% | |
| TGGGACCCATTTCCAAAGTA+TGG | + | chr2.2:29909882-29909901 | None:intergenic | 45.0% | |
| ! | AAATGGTGAAGTACCCGTAC+CGG | - | chr2.2:29910288-29910307 | MS.gene83338:intron | 45.0% |
| ! | CGGCCAATGTCTTTATTTGG+TGG | - | chr2.2:29909334-29909353 | MS.gene83338:intron | 45.0% |
| ! | GCTTTACTTCCGGGAAGTAT+GGG | - | chr2.2:29910854-29910873 | MS.gene83338:intron | 45.0% |
| ! | GTTCATCGCAAGTTGACAAC+AGG | + | chr2.2:29907971-29907990 | None:intergenic | 45.0% |
| !! | AGGAGTACCCATGCTTAAGA+GGG | + | chr2.2:29910267-29910286 | None:intergenic | 45.0% |
| !! | AGTGCAGCTGTTGGTTTAAG+TGG | - | chr2.2:29910904-29910923 | MS.gene83338:intron | 45.0% |
| !! | CACGACAGGATATCGACTTT+GGG | + | chr2.2:29908784-29908803 | None:intergenic | 45.0% |
| !! | CAGTTAAGCTTGGTGTTGGA+GGG | - | chr2.2:29910791-29910810 | MS.gene83338:intron | 45.0% |
| !! | CGAGAGGATTTGGTTTGAAG+AGG | - | chr2.2:29907766-29907785 | MS.gene83338:CDS | 45.0% |
| !! | TAGGAGTACCCATGCTTAAG+AGG | + | chr2.2:29910268-29910287 | None:intergenic | 45.0% |
| !! | TCACGACAGGATATCGACTT+TGG | + | chr2.2:29908785-29908804 | None:intergenic | 45.0% |
| !!! | TTTTGAAGCCACTAGGGAAC+CGG | + | chr2.2:29908704-29908723 | None:intergenic | 45.0% |
| ACACCAGCAGCATGAGGAAA+AGG | + | chr2.2:29907927-29907946 | None:intergenic | 50.0% | |
| ACAGCTGCACTTATGTTGGC+TGG | + | chr2.2:29910895-29910914 | None:intergenic | 50.0% | |
| ATAGTTTGGTTGCACGGCCT+CGG | - | chr2.2:29907164-29907183 | MS.gene83338:CDS | 50.0% | |
| CATAATATATGCAGGGGCCG+GGG | + | chr2.2:29908370-29908389 | None:intergenic | 50.0% | |
| CCAACTGAGTTAAGCTCACG+GGG | - | chr2.2:29908401-29908420 | MS.gene83338:intron | 50.0% | |
| CCAATTGGGTGAAACTCGTG+TGG | + | chr2.2:29909921-29909940 | None:intergenic | 50.0% | |
| CCACACGAGTTTCACCCAAT+TGG | - | chr2.2:29909918-29909937 | MS.gene83338:intron | 50.0% | |
| CTACAGAACCCACAGACAGT+AGG | - | chr2.2:29909736-29909755 | MS.gene83338:intron | 50.0% | |
| CTGCATCCTGCTTTACTTCC+GGG | - | chr2.2:29910845-29910864 | MS.gene83338:intron | 50.0% | |
| GAAGCTCCCGATGATCTAGA+AGG | - | chr2.2:29909675-29909694 | MS.gene83338:intron | 50.0% | |
| GCAAGTACTATGCCAGTACC+CGG | + | chr2.2:29910310-29910329 | None:intergenic | 50.0% | |
| GCATAATATATGCAGGGGCC+GGG | + | chr2.2:29908371-29908390 | None:intergenic | 50.0% | |
| GCCAACATAAGTGCAGCTGT+TGG | - | chr2.2:29910895-29910914 | MS.gene83338:intron | 50.0% | |
| GCTATGGGATTACAGCCTAC+AGG | - | chr2.2:29908205-29908224 | MS.gene83338:intron | 50.0% | |
| TACTATGCCAGTACCCGGTA+CGG | + | chr2.2:29910305-29910324 | None:intergenic | 50.0% | |
| ! | AAGTGACCAGGTGAGAGTGT+GGG | - | chr2.2:29907814-29907833 | MS.gene83338:intron | 50.0% |
| ! | AATGGTGAAGTACCCGTACC+GGG | - | chr2.2:29910289-29910308 | MS.gene83338:intron | 50.0% |
| ! | ACTTCCGGGAAGTATGGGAA+TGG | - | chr2.2:29910859-29910878 | MS.gene83338:intron | 50.0% |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | - | chr2.2:29908336-29908355 | MS.gene83338:intron | 50.0% |
| ! | GGTGTTGGAGGGTTTAGCAT+GGG | - | chr2.2:29910802-29910821 | MS.gene83338:intron | 50.0% |
| ! | TGGTGTTGGAGGGTTTAGCA+TGG | - | chr2.2:29910801-29910820 | MS.gene83338:intron | 50.0% |
| !! | ACAGCAGGAGAAGCATCAAG+TGG | + | chr2.2:29908973-29908992 | None:intergenic | 50.0% |
| !! | CAGCTGTTGGTTTAAGTGGC+TGG | - | chr2.2:29910908-29910927 | MS.gene83338:intron | 50.0% |
| !! | GCAGTTAAGCTTGGTGTTGG+AGG | - | chr2.2:29910790-29910809 | MS.gene83338:intron | 50.0% |
| !! | GTGGCAGTTAAGCTTGGTGT+TGG | - | chr2.2:29910787-29910806 | MS.gene83338:intron | 50.0% |
| AAGGGGTAGATGAAGCCACG+AGG | - | chr2.2:29911054-29911073 | MS.gene83338:intron | 55.0% | |
| ACCTGGAGCCATTATCACCG+AGG | + | chr2.2:29907184-29907203 | None:intergenic | 55.0% | |
| ACTATGCCAGTACCCGGTAC+GGG | + | chr2.2:29910304-29910323 | None:intergenic | 55.0% | |
| ATCAGGTTTCGAGGAGGAGC+TGG | - | chr2.2:29907901-29907920 | MS.gene83338:intron | 55.0% | |
| CAAGTGACCAGGTGAGAGTG+TGG | - | chr2.2:29907813-29907832 | MS.gene83338:intron | 55.0% | |
| CCCCGTGAGCTTAACTCAGT+TGG | + | chr2.2:29908404-29908423 | None:intergenic | 55.0% | |
| CGTGTACGGATCGGTACGTA+TGG | + | chr2.2:29910334-29910353 | None:intergenic | 55.0% | |
| GTGTTTAGCGGAGTCACGAC+AGG | + | chr2.2:29908798-29908817 | None:intergenic | 55.0% | |
| TTGCACGGCCTCGGTGATAA+TGG | - | chr2.2:29907173-29907192 | MS.gene83338:CDS | 55.0% | |
| TTTCACCGCCTGCACGTGTA+CGG | + | chr2.2:29910348-29910367 | None:intergenic | 55.0% | |
| ! | ATTGGCCGAGTTGGAGCAGT+TGG | + | chr2.2:29909322-29909341 | None:intergenic | 55.0% |
| ! | CAATGCAACCGGTTCCCTAG+TGG | - | chr2.2:29908693-29908712 | MS.gene83338:intron | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | - | chr2.2:29908337-29908356 | MS.gene83338:intron | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | - | chr2.2:29908338-29908357 | MS.gene83338:intron | 55.0% |
| ! | TGGCCTTTTCCTCATGCTGC+TGG | - | chr2.2:29907921-29907940 | MS.gene83338:CDS | 55.0% |
| !! | CTCGGAGTAATGGACCACCA+TGG | + | chr2.2:29908748-29908767 | None:intergenic | 55.0% |
| !! | GGAGTAATGGACCACCATGG+AGG | + | chr2.2:29908745-29908764 | None:intergenic | 55.0% |
| AAAGGACTGAGCACGCCTCG+TGG | + | chr2.2:29911072-29911091 | None:intergenic | 60.0% | |
| CCTTGAGGGCAATGCTGCCT+AGG | - | chr2.2:29911891-29911910 | MS.gene83338:CDS | 60.0% | |
| TCCTCTCCCACACTCTCACC+TGG | + | chr2.2:29907823-29907842 | None:intergenic | 60.0% | |
| ! | ACCAGGTGAGAGTGTGGGAG+AGG | - | chr2.2:29907819-29907838 | MS.gene83338:intron | 60.0% |
| ! | GAAGTACCCGTACCGGGTAC+TGG | - | chr2.2:29910295-29910314 | MS.gene83338:intron | 60.0% |
| ! | GTACCGATCCGTACACGTGC+AGG | - | chr2.2:29910337-29910356 | MS.gene83338:intron | 60.0% |
| !! | GCCTCGGTGATAATGGCTCC+AGG | - | chr2.2:29907180-29907199 | MS.gene83338:CDS | 60.0% |
| CCGATCCGTACACGTGCAGG+CGG | - | chr2.2:29910340-29910359 | MS.gene83338:intron | 65.0% | |
| CCGCCTGCACGTGTACGGAT+CGG | + | chr2.2:29910343-29910362 | None:intergenic | 65.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr2.2:29908350-29908369 | MS.gene83338:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr2.2:29908358-29908377 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 29906945 | 29911912 | 29906945 | ID=MS.gene83338 |
| chr2.2 | mRNA | 29906945 | 29911912 | 29906945 | ID=MS.gene83338.t1;Parent=MS.gene83338 |
| chr2.2 | exon | 29911888 | 29911912 | 29911888 | ID=MS.gene83338.t1.exon1;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29911888 | 29911912 | 29911888 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29911656 | 29911770 | 29911656 | ID=MS.gene83338.t1.exon2;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29911656 | 29911770 | 29911656 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29909681 | 29909717 | 29909681 | ID=MS.gene83338.t1.exon3;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29909681 | 29909717 | 29909681 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29909484 | 29909553 | 29909484 | ID=MS.gene83338.t1.exon4;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29909484 | 29909553 | 29909484 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29909104 | 29909208 | 29909104 | ID=MS.gene83338.t1.exon5;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29909104 | 29909208 | 29909104 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29907913 | 29908063 | 29907913 | ID=MS.gene83338.t1.exon6;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29907913 | 29908063 | 29907913 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29907741 | 29907823 | 29907741 | ID=MS.gene83338.t1.exon7;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29907741 | 29907823 | 29907741 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29907133 | 29907226 | 29907133 | ID=MS.gene83338.t1.exon8;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29907133 | 29907226 | 29907133 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| chr2.2 | exon | 29906945 | 29907032 | 29906945 | ID=MS.gene83338.t1.exon9;Parent=MS.gene83338.t1 |
| chr2.2 | CDS | 29906945 | 29907032 | 29906945 | ID=cds.MS.gene83338.t1;Parent=MS.gene83338.t1 |
| Gene Sequence |
| Protein sequence |
