Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84273.t1 | XP_013444788.1 | 82.5 | 315 | 6 | 1 | 5 | 270 | 44 | 358 | 2.50E-135 | 491.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84273.t1 | Q9LMM6 | 46.8 | 293 | 98 | 3 | 7 | 250 | 43 | 326 | 2.3e-60 | 233.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84273.t1 | A0A072TPQ1 | 82.5 | 315 | 6 | 1 | 5 | 270 | 44 | 358 | 1.8e-135 | 491.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene84273 | 0.803711 | 3.06E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene84273 | 0.820438 | 6.86E-53 | -1.69E-46 |
| MS.gene052493 | MS.gene84273 | 0.827317 | 1.67E-54 | -1.69E-46 |
| MS.gene052534 | MS.gene84273 | 0.812409 | 4.30E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene84273 | 0.848898 | 4.57E-60 | -1.69E-46 |
| MS.gene052675 | MS.gene84273 | 0.854364 | 1.29E-61 | -1.69E-46 |
| MS.gene052677 | MS.gene84273 | 0.85421 | 1.43E-61 | -1.69E-46 |
| MS.gene053726 | MS.gene84273 | 0.8037 | 3.08E-49 | -1.69E-46 |
| MS.gene054641 | MS.gene84273 | 0.827108 | 1.88E-54 | -1.69E-46 |
| MS.gene055724 | MS.gene84273 | 0.80863 | 2.82E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene84273 | 0.81053 | 1.10E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene84273 | 0.814396 | 1.57E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene84273 | 0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene84273 | 0.800949 | 1.13E-48 | -1.69E-46 |
| MS.gene060435 | MS.gene84273 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene060520 | MS.gene84273 | 0.808102 | 3.65E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene84273 | 0.84929 | 3.56E-60 | -1.69E-46 |
| MS.gene060850 | MS.gene84273 | 0.815624 | 8.40E-52 | -1.69E-46 |
| MS.gene060851 | MS.gene84273 | 0.822184 | 2.71E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene84273 | 0.815684 | 8.15E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene84273 | 0.838495 | 2.78E-57 | -1.69E-46 |
| MS.gene06121 | MS.gene84273 | 0.806746 | 7.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84273.t1 | MTR_8g028710 | 82.540 | 315 | 6 | 1 | 5 | 270 | 44 | 358 | 0.0 | 509 |
| MS.gene84273.t1 | MTR_7g078700 | 56.369 | 314 | 85 | 2 | 5 | 269 | 41 | 351 | 8.88e-115 | 334 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84273.t1 | AT2G46080 | 49.351 | 308 | 104 | 2 | 7 | 265 | 43 | 347 | 4.29e-93 | 278 |
| MS.gene84273.t1 | AT1G01550 | 46.758 | 293 | 98 | 3 | 7 | 250 | 43 | 326 | 3.96e-78 | 240 |
| MS.gene84273.t1 | AT1G01550 | 46.758 | 293 | 98 | 3 | 7 | 250 | 43 | 326 | 3.96e-78 | 240 |
| MS.gene84273.t1 | AT3G61500 | 34.630 | 257 | 144 | 7 | 5 | 258 | 35 | 270 | 1.51e-33 | 124 |
| MS.gene84273.t1 | AT3G61500 | 34.836 | 244 | 136 | 6 | 5 | 245 | 35 | 258 | 6.21e-33 | 122 |
| MS.gene84273.t1 | AT4G01360 | 30.435 | 322 | 142 | 8 | 11 | 267 | 43 | 347 | 6.71e-32 | 120 |
Find 65 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATTTCATCCTTGCTTTC+AGG | 0.187959 | 8.1:+72856215 | None:intergenic |
| GTGCTACATTTCTCAATTCT+AGG | 0.226753 | 8.1:+72855885 | None:intergenic |
| TTGAGCTACCCGTGAGTGTT+TGG | 0.296050 | 8.1:-72856115 | MS.gene84273:CDS |
| GTAGCTCAAGATCAGTTATA+AGG | 0.296998 | 8.1:+72856129 | None:intergenic |
| TTGAAGACTGTTGAGGAATT+AGG | 0.327051 | 8.1:-72855495 | MS.gene84273:CDS |
| CTCATCAAAGTCGTTTCTTC+GGG | 0.357220 | 8.1:-72855955 | MS.gene84273:CDS |
| CCTCATCAAAGTCGTTTCTT+CGG | 0.377060 | 8.1:-72855956 | MS.gene84273:CDS |
| TTGCTATCGTCTCTGAGGTT+TGG | 0.380646 | 8.1:-72855381 | MS.gene84273:CDS |
| CTACTTGCTGGTCTATGTTT+CGG | 0.383275 | 8.1:+72855331 | None:intergenic |
| AAGTGTGCTTTGCACAATTT+AGG | 0.389595 | 8.1:-72855984 | MS.gene84273:CDS |
| TAAATGAGGAAATTAGAGTT+AGG | 0.394328 | 8.1:-72855641 | MS.gene84273:CDS |
| TTCTTGCTCAACTTTGTCTT+CGG | 0.412172 | 8.1:+72855524 | None:intergenic |
| TTGCAAGGAGATCCATTCCT+TGG | 0.419978 | 8.1:+72855451 | None:intergenic |
| ATTTACACCACCTTGGATAG+TGG | 0.424354 | 8.1:+72855548 | None:intergenic |
| TGAGCTACCCGTGAGTGTTT+GGG | 0.433640 | 8.1:-72856114 | MS.gene84273:CDS |
| TGAGTGTTTGGGATGACAAA+TGG | 0.445686 | 8.1:-72856103 | MS.gene84273:CDS |
| GAGCTTTCTCGTCTGAATCA+AGG | 0.448368 | 8.1:-72856020 | MS.gene84273:CDS |
| ACCATTCTAGATGGTCTTGT+AGG | 0.450952 | 8.1:-72855864 | MS.gene84273:CDS |
| TGCAAGGAGATCCATTCCTT+GGG | 0.451475 | 8.1:+72855452 | None:intergenic |
| ATTATCAGTAAACTACTTGC+TGG | 0.454398 | 8.1:+72855319 | None:intergenic |
| TGCAGTACTACATGGTTTCG+AGG | 0.455830 | 8.1:-72856271 | None:intergenic |
| AGAAACGACTTTGATGAGGC+TGG | 0.457208 | 8.1:+72855960 | None:intergenic |
| AAATGTAGCACCATTCTAGA+TGG | 0.460812 | 8.1:-72855873 | MS.gene84273:CDS |
| ATGAAATCCTCAGCTTGTCT+TGG | 0.465634 | 8.1:-72856202 | MS.gene84273:CDS |
| TGCTACATTTCTCAATTCTA+GGG | 0.473899 | 8.1:+72855886 | None:intergenic |
| CTACATTAGCAGAGAGGCTA+AGG | 0.476706 | 8.1:-72856247 | MS.gene84273:CDS |
| CTTACAGAATCTTGTAAATG+AGG | 0.487402 | 8.1:-72855655 | MS.gene84273:CDS |
| CATGTTCTTTACTCGATGAC+TGG | 0.490294 | 8.1:-72855932 | MS.gene84273:CDS |
| TAGCTCAAGATCAGTTATAA+GGG | 0.500951 | 8.1:+72856130 | None:intergenic |
| ACTGTAAATGATCGTGTCGT+TGG | 0.506521 | 8.1:-72855354 | MS.gene84273:CDS |
| CTCCTTGCAAAGGGAGTGGA+TGG | 0.507754 | 8.1:-72855438 | MS.gene84273:CDS |
| AGGATCACTTGATCTTCCTA+AGG | 0.519671 | 8.1:-72855844 | MS.gene84273:CDS |
| GAAATTAGAGTTAGGTTCTC+CGG | 0.520380 | 8.1:-72855633 | MS.gene84273:CDS |
| CAGCTTGTCTTGGATGACTT+CGG | 0.520950 | 8.1:-72856192 | MS.gene84273:CDS |
| CTTCGGTATTTACACCACCT+TGG | 0.523873 | 8.1:+72855541 | None:intergenic |
| CACGACTAGTCAAAACTGCT+TGG | 0.526184 | 8.1:+72855409 | None:intergenic |
| GAGTGTTTGGGATGACAAAT+GGG | 0.539560 | 8.1:-72856102 | MS.gene84273:CDS |
| GAAGCTTATGCCTGAAAGCA+AGG | 0.548172 | 8.1:-72856225 | MS.gene84273:CDS |
| GGATCTCCTTGCAAAGGGAG+TGG | 0.550124 | 8.1:-72855442 | MS.gene84273:CDS |
| TTTACACCACCTTGGATAGT+GGG | 0.553081 | 8.1:+72855549 | None:intergenic |
| GGAATGGATCTCCTTGCAAA+GGG | 0.556996 | 8.1:-72855447 | MS.gene84273:CDS |
| GAAACGACTTTGATGAGGCT+GGG | 0.565221 | 8.1:+72855961 | None:intergenic |
| TTGTCATCCCAAACACTCAC+GGG | 0.570811 | 8.1:+72856107 | None:intergenic |
| GAGTTATATCCCACTATCCA+AGG | 0.574910 | 8.1:-72855558 | MS.gene84273:CDS |
| TCCTACAAGACCATCTAGAA+TGG | 0.579676 | 8.1:+72855863 | None:intergenic |
| AGGAATGGATCTCCTTGCAA+AGG | 0.587585 | 8.1:-72855448 | MS.gene84273:CDS |
| AACCATCCACTCCCTTTGCA+AGG | 0.590151 | 8.1:+72855436 | None:intergenic |
| TAGGGTTCTTAGCATTAATG+TGG | 0.590455 | 8.1:+72855904 | None:intergenic |
| AGAGAAGCTTTCCCAAGGAA+TGG | 0.590563 | 8.1:-72855463 | MS.gene84273:CDS |
| ATCACATTTGAAGACTGTTG+AGG | 0.597845 | 8.1:-72855502 | MS.gene84273:CDS |
| AGCTGTTGACGCTGTTGTGA+AGG | 0.598706 | 8.1:-72855580 | MS.gene84273:CDS |
| GTTCTTTACTCGATGACTGG+AGG | 0.600909 | 8.1:-72855929 | MS.gene84273:CDS |
| TTGTGCAAAGCACACTTAAG+CGG | 0.616461 | 8.1:+72855990 | None:intergenic |
| TTTGTCATCCCAAACACTCA+CGG | 0.620658 | 8.1:+72856106 | None:intergenic |
| ACACTTTGCTATCGTCTCTG+AGG | 0.623338 | 8.1:-72855386 | MS.gene84273:CDS |
| AAGTCATCCAAGACAAGCTG+AGG | 0.623900 | 8.1:+72856195 | None:intergenic |
| TTAGAGTTAGGTTCTCCGGT+GGG | 0.628606 | 8.1:-72855629 | MS.gene84273:CDS |
| GCAGTACTACATGGTTTCGA+GGG | 0.635458 | 8.1:-72856270 | None:intergenic |
| ATTAGAGTTAGGTTCTCCGG+TGG | 0.639898 | 8.1:-72855630 | MS.gene84273:CDS |
| CAATACAGAAAATTTCCCAC+CGG | 0.653582 | 8.1:+72855614 | None:intergenic |
| GCTGCAGAGAAGCTTTCCCA+AGG | 0.657770 | 8.1:-72855468 | MS.gene84273:CDS |
| CCGAAGAAACGACTTTGATG+AGG | 0.660900 | 8.1:+72855956 | None:intergenic |
| CGAGGGCTACATTAGCAGAG+AGG | 0.677926 | 8.1:-72856253 | MS.gene84273:CDS |
| GACTGTTGAGGAATTAGGCG+TGG | 0.680712 | 8.1:-72855490 | MS.gene84273:CDS |
| TTATATCCCACTATCCAAGG+TGG | 0.780218 | 8.1:-72855555 | MS.gene84273:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAATGAGGAAATTAGAGTT+AGG | - | chr8.1:72855942-72855961 | MS.gene84273:CDS | 25.0% |
| AAGGTTAAAAATTCTGCCAA+AGG | - | chr8.1:72855758-72855777 | MS.gene84273:intron | 30.0% | |
| CTTACAGAATCTTGTAAATG+AGG | - | chr8.1:72855928-72855947 | MS.gene84273:CDS | 30.0% | |
| TAAAAATTCTGCCAAAGGTA+AGG | - | chr8.1:72855763-72855782 | MS.gene84273:intron | 30.0% | |
| TAGCTCAAGATCAGTTATAA+GGG | + | chr8.1:72855456-72855475 | None:intergenic | 30.0% | |
| TGCTACATTTCTCAATTCTA+GGG | + | chr8.1:72855700-72855719 | None:intergenic | 30.0% | |
| ! | TTGGCAGAATTTTTAACCTT+AGG | + | chr8.1:72855758-72855777 | None:intergenic | 30.0% |
| !! | ATTTTCTGTATTGATCGAGT+TGG | - | chr8.1:72855979-72855998 | MS.gene84273:CDS | 30.0% |
| AAATGTAGCACCATTCTAGA+TGG | - | chr8.1:72855710-72855729 | MS.gene84273:intron | 35.0% | |
| AAGTGTGCTTTGCACAATTT+AGG | - | chr8.1:72855599-72855618 | MS.gene84273:CDS | 35.0% | |
| ATCACATTTGAAGACTGTTG+AGG | - | chr8.1:72856081-72856100 | MS.gene84273:CDS | 35.0% | |
| CAATACAGAAAATTTCCCAC+CGG | + | chr8.1:72855972-72855991 | None:intergenic | 35.0% | |
| GAAATTAGAGTTAGGTTCTC+CGG | - | chr8.1:72855950-72855969 | MS.gene84273:CDS | 35.0% | |
| GTAGCTCAAGATCAGTTATA+AGG | + | chr8.1:72855457-72855476 | None:intergenic | 35.0% | |
| GTGCTACATTTCTCAATTCT+AGG | + | chr8.1:72855701-72855720 | None:intergenic | 35.0% | |
| TAGGGTTCTTAGCATTAATG+TGG | + | chr8.1:72855682-72855701 | None:intergenic | 35.0% | |
| TTCAAAGAAGTTGCTAGACT+TGG | - | chr8.1:72855865-72855884 | MS.gene84273:CDS | 35.0% | |
| TTCTGTAAGCCTTAAAAAGC+AGG | + | chr8.1:72855917-72855936 | None:intergenic | 35.0% | |
| TTCTTGCTCAACTTTGTCTT+CGG | + | chr8.1:72856062-72856081 | None:intergenic | 35.0% | |
| TTGAAGACTGTTGAGGAATT+AGG | - | chr8.1:72856088-72856107 | MS.gene84273:CDS | 35.0% | |
| TTGCATCAAAACCTTACCTT+TGG | + | chr8.1:72855777-72855796 | None:intergenic | 35.0% | |
| !! | GTTTTGATGCAAGCTATGTA+TGG | - | chr8.1:72855785-72855804 | MS.gene84273:intron | 35.0% |
| ACTGTAAATGATCGTGTCGT+TGG | - | chr8.1:72856229-72856248 | MS.gene84273:CDS | 40.0% | |
| AGGATCACTTGATCTTCCTA+AGG | - | chr8.1:72855739-72855758 | MS.gene84273:intron | 40.0% | |
| AGGATTTCATCCTTGCTTTC+AGG | + | chr8.1:72855371-72855390 | None:intergenic | 40.0% | |
| ATGAAATCCTCAGCTTGTCT+TGG | - | chr8.1:72855381-72855400 | MS.gene84273:CDS | 40.0% | |
| ATTTACACCACCTTGGATAG+TGG | + | chr8.1:72856038-72856057 | None:intergenic | 40.0% | |
| CATGTTCTTTACTCGATGAC+TGG | - | chr8.1:72855651-72855670 | MS.gene84273:CDS | 40.0% | |
| CCTCATCAAAGTCGTTTCTT+CGG | - | chr8.1:72855627-72855646 | MS.gene84273:CDS | 40.0% | |
| CTCATCAAAGTCGTTTCTTC+GGG | - | chr8.1:72855628-72855647 | MS.gene84273:CDS | 40.0% | |
| GAGTTATATCCCACTATCCA+AGG | - | chr8.1:72856025-72856044 | MS.gene84273:CDS | 40.0% | |
| TCCTACAAGACCATCTAGAA+TGG | + | chr8.1:72855723-72855742 | None:intergenic | 40.0% | |
| TTATATCCCACTATCCAAGG+TGG | - | chr8.1:72856028-72856047 | MS.gene84273:CDS | 40.0% | |
| TTGTGCAAAGCACACTTAAG+CGG | + | chr8.1:72855596-72855615 | None:intergenic | 40.0% | |
| TTTACACCACCTTGGATAGT+GGG | + | chr8.1:72856037-72856056 | None:intergenic | 40.0% | |
| TTTGTCATCCCAAACACTCA+CGG | + | chr8.1:72855480-72855499 | None:intergenic | 40.0% | |
| ! | CTACTTGCTGGTCTATGTTT+CGG | + | chr8.1:72856255-72856274 | None:intergenic | 40.0% |
| ! | GAGTGTTTGGGATGACAAAT+GGG | - | chr8.1:72855481-72855500 | MS.gene84273:CDS | 40.0% |
| ! | TGAGTGTTTGGGATGACAAA+TGG | - | chr8.1:72855480-72855499 | MS.gene84273:CDS | 40.0% |
| !! | ACCATTCTAGATGGTCTTGT+AGG | - | chr8.1:72855719-72855738 | MS.gene84273:intron | 40.0% |
| AAGTCATCCAAGACAAGCTG+AGG | + | chr8.1:72855391-72855410 | None:intergenic | 45.0% | |
| AGAAACGACTTTGATGAGGC+TGG | + | chr8.1:72855626-72855645 | None:intergenic | 45.0% | |
| AGAGAAGCTTTCCCAAGGAA+TGG | - | chr8.1:72856120-72856139 | MS.gene84273:CDS | 45.0% | |
| AGCTATGTATGGAGTCAAGG+TGG | - | chr8.1:72855796-72855815 | MS.gene84273:intron | 45.0% | |
| AGGAATGGATCTCCTTGCAA+AGG | - | chr8.1:72856135-72856154 | MS.gene84273:CDS | 45.0% | |
| ATGTGCCTGACATGCATTCA+TGG | - | chr8.1:72855888-72855907 | MS.gene84273:CDS | 45.0% | |
| ATTAGAGTTAGGTTCTCCGG+TGG | - | chr8.1:72855953-72855972 | MS.gene84273:CDS | 45.0% | |
| CAGCTTGTCTTGGATGACTT+CGG | - | chr8.1:72855391-72855410 | MS.gene84273:CDS | 45.0% | |
| CCGAAGAAACGACTTTGATG+AGG | + | chr8.1:72855630-72855649 | None:intergenic | 45.0% | |
| CTACATTAGCAGAGAGGCTA+AGG | - | chr8.1:72855336-72855355 | MS.gene84273:CDS | 45.0% | |
| CTTCGGTATTTACACCACCT+TGG | + | chr8.1:72856045-72856064 | None:intergenic | 45.0% | |
| GAAACGACTTTGATGAGGCT+GGG | + | chr8.1:72855625-72855644 | None:intergenic | 45.0% | |
| GAAGCTTATGCCTGAAAGCA+AGG | - | chr8.1:72855358-72855377 | MS.gene84273:CDS | 45.0% | |
| GAGCTTTCTCGTCTGAATCA+AGG | - | chr8.1:72855563-72855582 | MS.gene84273:CDS | 45.0% | |
| GCAAGCTATGTATGGAGTCA+AGG | - | chr8.1:72855793-72855812 | MS.gene84273:intron | 45.0% | |
| GGAATGGATCTCCTTGCAAA+GGG | - | chr8.1:72856136-72856155 | MS.gene84273:CDS | 45.0% | |
| GTTCTTTACTCGATGACTGG+AGG | - | chr8.1:72855654-72855673 | MS.gene84273:CDS | 45.0% | |
| TGCAAGGAGATCCATTCCTT+GGG | + | chr8.1:72856134-72856153 | None:intergenic | 45.0% | |
| TGTGCCTGACATGCATTCAT+GGG | - | chr8.1:72855889-72855908 | MS.gene84273:CDS | 45.0% | |
| TTAGAGTTAGGTTCTCCGGT+GGG | - | chr8.1:72855954-72855973 | MS.gene84273:CDS | 45.0% | |
| TTGCAAGGAGATCCATTCCT+TGG | + | chr8.1:72856135-72856154 | None:intergenic | 45.0% | |
| TTGTCATCCCAAACACTCAC+GGG | + | chr8.1:72855479-72855498 | None:intergenic | 45.0% | |
| ! | ACACTTTGCTATCGTCTCTG+AGG | - | chr8.1:72856197-72856216 | MS.gene84273:CDS | 45.0% |
| ! | CACGACTAGTCAAAACTGCT+TGG | + | chr8.1:72856177-72856196 | None:intergenic | 45.0% |
| ! | GTGTTTTCTGCAGCATTCTC+TGG | - | chr8.1:72855839-72855858 | MS.gene84273:CDS | 45.0% |
| !! | TTGCTATCGTCTCTGAGGTT+TGG | - | chr8.1:72856202-72856221 | MS.gene84273:CDS | 45.0% |
| AACCATCCACTCCCTTTGCA+AGG | + | chr8.1:72856150-72856169 | None:intergenic | 50.0% | |
| AGCTGTTGACGCTGTTGTGA+AGG | - | chr8.1:72856003-72856022 | MS.gene84273:CDS | 50.0% | |
| GACTGTTGAGGAATTAGGCG+TGG | - | chr8.1:72856093-72856112 | MS.gene84273:CDS | 50.0% | |
| TGAGCTACCCGTGAGTGTTT+GGG | - | chr8.1:72855469-72855488 | MS.gene84273:CDS | 50.0% | |
| TTGAGCTACCCGTGAGTGTT+TGG | - | chr8.1:72855468-72855487 | MS.gene84273:CDS | 50.0% | |
| !!! | TCATGGGCGCCTGCTTTTTA+AGG | - | chr8.1:72855905-72855924 | MS.gene84273:CDS | 50.0% |
| CGAGGGCTACATTAGCAGAG+AGG | - | chr8.1:72855330-72855349 | MS.gene84273:CDS | 55.0% | |
| CTCCTTGCAAAGGGAGTGGA+TGG | - | chr8.1:72856145-72856164 | MS.gene84273:CDS | 55.0% | |
| GCTGCAGAGAAGCTTTCCCA+AGG | - | chr8.1:72856115-72856134 | MS.gene84273:CDS | 55.0% | |
| GGATCTCCTTGCAAAGGGAG+TGG | - | chr8.1:72856141-72856160 | MS.gene84273:CDS | 55.0% | |
| GGCGCCCATGAATGCATGTC+AGG | + | chr8.1:72855896-72855915 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 72855323 | 72856282 | 72855323 | ID=MS.gene84273 |
| chr8.1 | mRNA | 72855323 | 72856282 | 72855323 | ID=MS.gene84273.t1;Parent=MS.gene84273 |
| chr8.1 | exon | 72855826 | 72856282 | 72855826 | ID=MS.gene84273.t1.exon1;Parent=MS.gene84273.t1 |
| chr8.1 | CDS | 72855826 | 72856282 | 72855826 | ID=cds.MS.gene84273.t1;Parent=MS.gene84273.t1 |
| chr8.1 | exon | 72855323 | 72855678 | 72855323 | ID=MS.gene84273.t1.exon2;Parent=MS.gene84273.t1 |
| chr8.1 | CDS | 72855323 | 72855678 | 72855323 | ID=cds.MS.gene84273.t1;Parent=MS.gene84273.t1 |
| Gene Sequence |
| Protein sequence |
