Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85641.t1 | XP_003603508.2 | 96 | 425 | 17 | 0 | 6 | 430 | 34 | 458 | 8.70E-191 | 676.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85641.t1 | F4IDY7 | 43.9 | 296 | 161 | 4 | 6 | 299 | 141 | 433 | 2.0e-63 | 244.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85641.t1 | G7JCA6 | 96.0 | 425 | 17 | 0 | 6 | 430 | 34 | 458 | 6.3e-191 | 676.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049666 | MS.gene85641 | 0.815212 | 1.04E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene85641 | 0.803807 | 2.92E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene85641 | 0.808088 | 3.68E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene85641 | 0.818714 | 1.70E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene85641 | 0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene85641 | 0.838671 | 2.50E-57 | -1.69E-46 |
| MS.gene05365 | MS.gene85641 | 0.800285 | 1.55E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene85641 | 0.820101 | 8.19E-53 | -1.69E-46 |
| MS.gene055808 | MS.gene85641 | 0.815886 | 7.35E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene85641 | 0.816653 | 4.95E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene85641 | 0.837646 | 4.60E-57 | -1.69E-46 |
| MS.gene056215 | MS.gene85641 | 0.810309 | 1.23E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene85641 | 0.81117 | 8.00E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene85641 | 0.814209 | 1.73E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene85641 | 0.802313 | 5.95E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene85641 | 0.839526 | 1.50E-57 | -1.69E-46 |
| MS.gene058037 | MS.gene85641 | 0.805408 | 1.35E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene85641 | 0.801498 | 8.75E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene85641 | 0.838707 | 2.45E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85641.t1 | MTR_3g108410 | 96.941 | 425 | 13 | 0 | 6 | 430 | 34 | 458 | 0.0 | 851 |
| MS.gene85641.t1 | MTR_4g107390 | 43.333 | 300 | 161 | 4 | 6 | 299 | 132 | 428 | 4.07e-81 | 265 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85641.t1 | AT5G25580 | 41.422 | 408 | 177 | 13 | 6 | 410 | 56 | 404 | 8.26e-84 | 263 |
| MS.gene85641.t1 | AT1G18950 | 43.919 | 296 | 161 | 4 | 6 | 299 | 141 | 433 | 6.62e-78 | 256 |
| MS.gene85641.t1 | AT1G18950 | 43.919 | 296 | 161 | 4 | 6 | 299 | 141 | 433 | 7.32e-78 | 256 |
| MS.gene85641.t1 | AT1G18950 | 43.919 | 296 | 161 | 4 | 6 | 299 | 141 | 433 | 7.41e-78 | 256 |
Find 95 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGTCAAACCCATGCTTTC+TGG | 0.107105 | 3.3:-88468376 | None:intergenic |
| CTTTGCGAAAAGAAGAAATT+TGG | 0.158020 | 3.3:-88466285 | None:intergenic |
| TTCGGTGATTCGTGTGATTC+AGG | 0.193742 | 3.3:+88464534 | MS.gene85641:CDS |
| CACTGCACGATTCTGATAAA+TGG | 0.200696 | 3.3:+88465659 | MS.gene85641:CDS |
| AGATTCTATGGCAGTATTTC+GGG | 0.220624 | 3.3:-88468425 | None:intergenic |
| CCGATCCTCTGTTTCTATCT+TGG | 0.238076 | 3.3:-88468117 | None:intergenic |
| CAGACAGTGATGATTCTAAA+AGG | 0.266844 | 3.3:+88468167 | MS.gene85641:CDS |
| AGGCCTATTAATTACAGTTT+TGG | 0.281092 | 3.3:+88466974 | MS.gene85641:CDS |
| TAGATTCTATGGCAGTATTT+CGG | 0.284305 | 3.3:-88468426 | None:intergenic |
| TTACCAAAACTGTAATTAAT+AGG | 0.297695 | 3.3:-88466977 | None:intergenic |
| TTACTAGAGCGAACCCCTTT+TGG | 0.327324 | 3.3:-88468322 | None:intergenic |
| TATCACTTCCCAACTTTCAA+TGG | 0.352203 | 3.3:+88466522 | MS.gene85641:CDS |
| AGCTTATGATCGAACAATTA+AGG | 0.353605 | 3.3:+88467652 | MS.gene85641:CDS |
| CAGCCTTTGCCCTTACGGTT+TGG | 0.355901 | 3.3:-88466497 | None:intergenic |
| AGGAACAATAGTAGATTCTA+TGG | 0.361419 | 3.3:-88468437 | None:intergenic |
| TTCAGAAAATTCGTCAAGAT+TGG | 0.371680 | 3.3:-88466558 | None:intergenic |
| TCCGATTCATCCTCTGAATC+AGG | 0.392591 | 3.3:-88468457 | None:intergenic |
| GCATCATCACTCTCGGATAT+AGG | 0.394140 | 3.3:-88468199 | None:intergenic |
| TTTGCGAAAAGAAGAAATTT+GGG | 0.398176 | 3.3:-88466284 | None:intergenic |
| AGGTTAGCAAGAGAAGCATT+AGG | 0.402729 | 3.3:-88464625 | None:intergenic |
| TCAACTCGGTACCCTTTAGA+TGG | 0.404205 | 3.3:-88465855 | None:intergenic |
| CAGGTGTTTAGTCCATTACT+TGG | 0.411796 | 3.3:+88464553 | MS.gene85641:CDS |
| ATTAATGATGCTTTAAAAGA+AGG | 0.414751 | 3.3:+88466259 | MS.gene85641:CDS |
| ATCACTTCCCAACTTTCAAT+GGG | 0.421965 | 3.3:+88466523 | MS.gene85641:CDS |
| ATAAGCAGCCTTTGCCCTTA+CGG | 0.423236 | 3.3:-88466502 | None:intergenic |
| ATGGAACTCGCACATCCTAT+TGG | 0.427726 | 3.3:+88466323 | MS.gene85641:CDS |
| CCATGCTTTCTGGAACAGTA+TGG | 0.428988 | 3.3:-88468366 | None:intergenic |
| CATGCAGTTTCTTATCCAAA+AGG | 0.435630 | 3.3:+88468307 | MS.gene85641:CDS |
| CGCTCTAGTAAGCGGATAGC+TGG | 0.435706 | 3.3:+88468334 | MS.gene85641:CDS |
| ATTACTTGGTAATGATTTGA+AGG | 0.436043 | 3.3:+88464567 | MS.gene85641:CDS |
| CTCTTTGCTTTAGGTTGCTG+AGG | 0.438103 | 3.3:+88465815 | MS.gene85641:intron |
| AAAGAGGCCTTTGGAATAGA+TGG | 0.441916 | 3.3:+88466304 | MS.gene85641:CDS |
| AACTGACTACTTGGTGGCCA+TGG | 0.442271 | 3.3:+88465701 | MS.gene85641:CDS |
| AGTGTTTCCCATTGAAAGTT+GGG | 0.447901 | 3.3:-88466530 | None:intergenic |
| TCGTGCAGTGCTTTACCAAC+AGG | 0.455675 | 3.3:-88465646 | None:intergenic |
| GTACAAGGAGCTTGATCCAT+TGG | 0.462789 | 3.3:+88465965 | MS.gene85641:CDS |
| ATGCAGTTTCTTATCCAAAA+GGG | 0.465191 | 3.3:+88468308 | MS.gene85641:CDS |
| AATCCACTTGTACCATCTAA+AGG | 0.467332 | 3.3:+88465843 | MS.gene85641:CDS |
| GAATGATGAACATGTGAGTC+AGG | 0.470069 | 3.3:+88468258 | MS.gene85641:CDS |
| AAGTCCGATCTCGATTTCTT+CGG | 0.471156 | 3.3:-88464596 | None:intergenic |
| TTTCTATCTTGGTCAACAGC+AGG | 0.474906 | 3.3:-88468106 | None:intergenic |
| TCCTGATTCAGAGGATGAAT+CGG | 0.475091 | 3.3:+88468456 | MS.gene85641:CDS |
| ATCCACTTGTACCATCTAAA+GGG | 0.476344 | 3.3:+88465844 | MS.gene85641:CDS |
| AGAAAATTCGTCAAGATTGG+TGG | 0.491147 | 3.3:-88466555 | None:intergenic |
| CCTTCAAAATTTGAATGTGA+AGG | 0.493913 | 3.3:-88464645 | None:intergenic |
| TCTCTAAGAAACTGACTACT+TGG | 0.495153 | 3.3:+88465692 | MS.gene85641:CDS |
| CTTTCTGGAACAGTATGGCC+AGG | 0.495454 | 3.3:-88468361 | None:intergenic |
| GAGTGTTTCCCATTGAAAGT+TGG | 0.495814 | 3.3:-88466531 | None:intergenic |
| TTCTATCTTGGTCAACAGCA+GGG | 0.496078 | 3.3:-88468105 | None:intergenic |
| TCTTTGCTTTAGGTTGCTGA+GGG | 0.496709 | 3.3:+88465816 | MS.gene85641:intron |
| TGTTCTTGAGAAACTTCAAA+AGG | 0.498832 | 3.3:+88466743 | MS.gene85641:CDS |
| TCAGAGGATGAATCGGATGA+AGG | 0.501955 | 3.3:+88468463 | MS.gene85641:CDS |
| ACTGCACGATTCTGATAAAT+GGG | 0.502285 | 3.3:+88465660 | MS.gene85641:CDS |
| CGCAGAGTCACAGATTGTAC+AGG | 0.502678 | 3.3:+88466450 | MS.gene85641:CDS |
| TTCAAATCATTACCAAGTAA+TGG | 0.508223 | 3.3:-88464565 | None:intergenic |
| TGCATGGCTAGAGTGTTCTT+CGG | 0.509300 | 3.3:-88468290 | None:intergenic |
| CCATACTGTTCCAGAAAGCA+TGG | 0.529208 | 3.3:+88468366 | MS.gene85641:CDS |
| AAGCGGATAGCTGGAGTCCC+TGG | 0.547182 | 3.3:+88468343 | MS.gene85641:CDS |
| TACTATTGTTCCTGATTCAG+AGG | 0.548704 | 3.3:+88468447 | MS.gene85641:CDS |
| CAGAGGATGAATCGGATGAA+GGG | 0.550551 | 3.3:+88468464 | MS.gene85641:CDS |
| AGACAGTGATGATTCTAAAA+GGG | 0.551033 | 3.3:+88468168 | MS.gene85641:CDS |
| AGTCTCCACTCCAAACCGTA+AGG | 0.554203 | 3.3:+88466487 | MS.gene85641:CDS |
| AGCAGCAGTAAACGATCCAA+TGG | 0.555310 | 3.3:-88465981 | None:intergenic |
| TTTGCCCTTACGGTTTGGAG+TGG | 0.558656 | 3.3:-88466492 | None:intergenic |
| CACGCTCTTGTCGCACTCGA+AGG | 0.565157 | 3.3:+88466954 | MS.gene85641:CDS |
| ACTCCAAACCGTAAGGGCAA+AGG | 0.579452 | 3.3:+88466494 | MS.gene85641:CDS |
| ATAACCAGCATCATCACTCT+CGG | 0.585101 | 3.3:-88468206 | None:intergenic |
| CTAAGAAACTGACTACTTGG+TGG | 0.585357 | 3.3:+88465695 | MS.gene85641:CDS |
| TGCAGTTTCTTATCCAAAAG+GGG | 0.586748 | 3.3:+88468309 | MS.gene85641:CDS |
| TCTATCTTGGTCAACAGCAG+GGG | 0.588354 | 3.3:-88468104 | None:intergenic |
| TACCCTTTAGATGGTACAAG+TGG | 0.589127 | 3.3:-88465846 | None:intergenic |
| AGAGGAGATATCAAAGTACA+AGG | 0.590906 | 3.3:+88465950 | MS.gene85641:CDS |
| GTCTGCAGAAACATCTATGT+CGG | 0.600987 | 3.3:-88468149 | None:intergenic |
| ACTGACTACTTGGTGGCCAT+GGG | 0.604280 | 3.3:+88465702 | MS.gene85641:CDS |
| TACCAGGGAATACCACCTGT+TGG | 0.604784 | 3.3:+88465631 | MS.gene85641:intron |
| ATCAGCTCTAACTTCACAGA+GGG | 0.608902 | 3.3:-88466009 | None:intergenic |
| CATACTGTTCCAGAAAGCAT+GGG | 0.613802 | 3.3:+88468367 | MS.gene85641:CDS |
| GTCTCCACTCCAAACCGTAA+GGG | 0.614231 | 3.3:+88466488 | MS.gene85641:CDS |
| AGTCAGTTTCTTAGAGAGAG+CGG | 0.620141 | 3.3:-88465686 | None:intergenic |
| CCAAGATAGAAACAGAGGAT+CGG | 0.620891 | 3.3:+88468117 | MS.gene85641:CDS |
| TGAGAATCACAGCAGTAGTG+AGG | 0.635227 | 3.3:+88468234 | MS.gene85641:CDS |
| GCGAGTTCCATCTATTCCAA+AGG | 0.636106 | 3.3:-88466311 | None:intergenic |
| ATATCCGAGAGTGATGATGC+TGG | 0.636194 | 3.3:+88468202 | MS.gene85641:CDS |
| TTTCTGGAACAGTATGGCCA+GGG | 0.642106 | 3.3:-88468360 | None:intergenic |
| AAGGGGTTCGCTCTAGTAAG+CGG | 0.646238 | 3.3:+88468326 | MS.gene85641:CDS |
| TCTATGGCAGTATTTCGGGT+AGG | 0.657275 | 3.3:-88468421 | None:intergenic |
| ACAGCCGAAGAAATCGAGAT+CGG | 0.657831 | 3.3:+88464592 | MS.gene85641:CDS |
| TTATGTTCAGCAACATGATG+TGG | 0.660748 | 3.3:+88466228 | MS.gene85641:intron |
| TGCAGTGCTTTACCAACAGG+TGG | 0.663046 | 3.3:-88465643 | None:intergenic |
| GCAGAGTCACAGATTGTACA+GGG | 0.673231 | 3.3:+88466451 | MS.gene85641:CDS |
| TTATGATCGAACAATTAAGG+AGG | 0.677041 | 3.3:+88467655 | MS.gene85641:CDS |
| GTTGACCAAGATAGAAACAG+AGG | 0.683073 | 3.3:+88468112 | MS.gene85641:CDS |
| TGATGAACATGTGAGTCAGG+CGG | 0.683825 | 3.3:+88468261 | MS.gene85641:CDS |
| CTTTGCTTTAGGTTGCTGAG+GGG | 0.693013 | 3.3:+88465817 | MS.gene85641:intron |
| CATCAGCTCTAACTTCACAG+AGG | 0.765715 | 3.3:-88466010 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGAAATAATTACCAAT+AGG | - | chr3.3:88466341-88466360 | None:intergenic | 15.0% |
| !! | TTAATTAAGGTTTCAAATAT+GGG | - | chr3.3:88466629-88466648 | None:intergenic | 15.0% |
| !! | TTCAATAGTAGTAAATATTA+GGG | + | chr3.3:88466789-88466808 | MS.gene85641:intron | 15.0% |
| !!! | AAGACAGATTAATAATTTTT+AGG | - | chr3.3:88466394-88466413 | None:intergenic | 15.0% |
| !!! | AGACAGATTAATAATTTTTA+GGG | - | chr3.3:88466393-88466412 | None:intergenic | 15.0% |
| !! | AAAATTTGAACAAACTAAAC+AGG | - | chr3.3:88466047-88466066 | None:intergenic | 20.0% |
| !! | AGAATGGAAATTATAAATGA+TGG | - | chr3.3:88468000-88468019 | None:intergenic | 20.0% |
| !! | GAAAGGAATTAGATAAAAAA+GGG | - | chr3.3:88466153-88466172 | None:intergenic | 20.0% |
| !! | GTTAATTAAGGTTTCAAATA+TGG | - | chr3.3:88466630-88466649 | None:intergenic | 20.0% |
| !! | GTTCAATAGTAGTAAATATT+AGG | + | chr3.3:88466788-88466807 | MS.gene85641:intron | 20.0% |
| !! | TGAAAGGAATTAGATAAAAA+AGG | - | chr3.3:88466154-88466173 | None:intergenic | 20.0% |
| !! | TTAAATCTACAAAGAAACTA+AGG | - | chr3.3:88465595-88465614 | None:intergenic | 20.0% |
| !! | TTACCAAAACTGTAATTAAT+AGG | - | chr3.3:88466980-88466999 | None:intergenic | 20.0% |
| !! | TTGAAACATCAAAATTTGAA+AGG | - | chr3.3:88466170-88466189 | None:intergenic | 20.0% |
| !!! | ACATTAATCAAGTTCTTTTT+GGG | + | chr3.3:88467617-88467636 | MS.gene85641:intron | 20.0% |
| !!! | ATTAATGATGCTTTAAAAGA+AGG | + | chr3.3:88466259-88466278 | MS.gene85641:CDS | 20.0% |
| !!! | TTAATTTTCTAAGTACTAAG+TGG | + | chr3.3:88467319-88467338 | MS.gene85641:intron | 20.0% |
| ! | AAAACTATCAACATTCTACA+AGG | - | chr3.3:88467762-88467781 | None:intergenic | 25.0% |
| ! | AACAAACCATCAAAATAATC+TGG | - | chr3.3:88466205-88466224 | None:intergenic | 25.0% |
| ! | AATGAGATAATATGCACTAT+GGG | - | chr3.3:88465375-88465394 | None:intergenic | 25.0% |
| ! | AATGCCATAACAATTGATAT+TGG | - | chr3.3:88465899-88465918 | None:intergenic | 25.0% |
| ! | ACTACCAATATCAATTGTTA+TGG | + | chr3.3:88465892-88465911 | MS.gene85641:intron | 25.0% |
| ! | ATGCAGCAAATATATTGTTA+GGG | - | chr3.3:88467965-88467984 | None:intergenic | 25.0% |
| ! | CATATCTTTCTTAATGGTTT+CGG | - | chr3.3:88464949-88464968 | None:intergenic | 25.0% |
| ! | CATTCAAAGACAGTTAATTA+AGG | - | chr3.3:88466642-88466661 | None:intergenic | 25.0% |
| ! | GAAATGAATCAACATAGTAA+TGG | - | chr3.3:88465201-88465220 | None:intergenic | 25.0% |
| ! | GTATTACTTGCACTATTAAA+GGG | + | chr3.3:88467061-88467080 | MS.gene85641:intron | 25.0% |
| ! | TAATGAGATAATATGCACTA+TGG | - | chr3.3:88465376-88465395 | None:intergenic | 25.0% |
| ! | TAATTATCTCTGAGCATTAT+TGG | + | chr3.3:88466119-88466138 | MS.gene85641:intron | 25.0% |
| ! | TATCTGATATTATATCCCAT+TGG | + | chr3.3:88467702-88467721 | MS.gene85641:intron | 25.0% |
| ! | TATGCAGCAAATATATTGTT+AGG | - | chr3.3:88467966-88467985 | None:intergenic | 25.0% |
| ! | TATTACTTGCACTATTAAAG+GGG | + | chr3.3:88467062-88467081 | MS.gene85641:intron | 25.0% |
| ! | TCAGAGATAATTATATAGTC+AGG | - | chr3.3:88466112-88466131 | None:intergenic | 25.0% |
| ! | TGCAATTCTTAACATTGAAA+TGG | - | chr3.3:88467395-88467414 | None:intergenic | 25.0% |
| ! | TGTATTACTTGCACTATTAA+AGG | + | chr3.3:88467060-88467079 | MS.gene85641:intron | 25.0% |
| ! | TTATCAACGTTATTATTCTC+AGG | - | chr3.3:88467926-88467945 | None:intergenic | 25.0% |
| ! | TTCAAATCATTACCAAGTAA+TGG | - | chr3.3:88464568-88464587 | None:intergenic | 25.0% |
| ! | TTTCAAATATGGGTAAATGA+TGG | - | chr3.3:88466619-88466638 | None:intergenic | 25.0% |
| ! | TTTGCGAAAAGAAGAAATTT+GGG | - | chr3.3:88466287-88466306 | None:intergenic | 25.0% |
| !! | GAAAAGAAGCAAAGTATTAA+AGG | - | chr3.3:88467848-88467867 | None:intergenic | 25.0% |
| !! | GACATTAATCAAGTTCTTTT+TGG | + | chr3.3:88467616-88467635 | MS.gene85641:intron | 25.0% |
| !!! | ACTTTCTATTTTTCTGTTGA+TGG | + | chr3.3:88465539-88465558 | MS.gene85641:intron | 25.0% |
| !!! | AGTTTTTTGTTATCATCAAG+TGG | + | chr3.3:88467776-88467795 | MS.gene85641:intron | 25.0% |
| !!! | ATGATACCAGATTATTTTGA+TGG | + | chr3.3:88466196-88466215 | MS.gene85641:intron | 25.0% |
| !!! | ATTACTTGGTAATGATTTGA+AGG | + | chr3.3:88464567-88464586 | MS.gene85641:CDS | 25.0% |
| !!! | GATTTATTGCTTTGTTTTGT+TGG | + | chr3.3:88465784-88465803 | MS.gene85641:intron | 25.0% |
| !!! | TTTAATTTTTACTCCTACCA+GGG | + | chr3.3:88465616-88465635 | MS.gene85641:intron | 25.0% |
| AAATCAACCAAAGCAAAGAA+AGG | + | chr3.3:88464908-88464927 | MS.gene85641:intron | 30.0% | |
| AAGTTAGAGCTGATGTAATA+TGG | + | chr3.3:88466018-88466037 | MS.gene85641:intron | 30.0% | |
| AATGAAACAAAAAGAGAGAC+AGG | + | chr3.3:88466886-88466905 | MS.gene85641:CDS | 30.0% | |
| ACTATTGAACACAAGACAAA+AGG | - | chr3.3:88466778-88466797 | None:intergenic | 30.0% | |
| ACTCTCCATATCTTTCTTAA+TGG | - | chr3.3:88464955-88464974 | None:intergenic | 30.0% | |
| AGCTTATGATCGAACAATTA+AGG | + | chr3.3:88467652-88467671 | MS.gene85641:CDS | 30.0% | |
| AGGAACAATAGTAGATTCTA+TGG | - | chr3.3:88468440-88468459 | None:intergenic | 30.0% | |
| ATAGTGCAAGTAATACACAA+AGG | - | chr3.3:88467057-88467076 | None:intergenic | 30.0% | |
| ATCTACAAAGAAACTAAGGA+TGG | - | chr3.3:88465591-88465610 | None:intergenic | 30.0% | |
| ATGAGATAATATGCACTATG+GGG | - | chr3.3:88465374-88465393 | None:intergenic | 30.0% | |
| ATGATGACTAATGGAACAAT+AGG | - | chr3.3:88467433-88467452 | None:intergenic | 30.0% | |
| ATGCAGTTTCTTATCCAAAA+GGG | + | chr3.3:88468308-88468327 | MS.gene85641:CDS | 30.0% | |
| ATTACTTGCACTATTAAAGG+GGG | + | chr3.3:88467063-88467082 | MS.gene85641:intron | 30.0% | |
| ATTGCTTTGTCTGTAGTAAA+TGG | + | chr3.3:88465150-88465169 | MS.gene85641:intron | 30.0% | |
| ATTTGAACAAACTAAACAGG+AGG | - | chr3.3:88466044-88466063 | None:intergenic | 30.0% | |
| CCTTCAAAATTTGAATGTGA+AGG | - | chr3.3:88464648-88464667 | None:intergenic | 30.0% | |
| CGAAACCATTAAGAAAGATA+TGG | + | chr3.3:88464947-88464966 | MS.gene85641:intron | 30.0% | |
| CTAAGACTAAAAACTGATAC+AGG | - | chr3.3:88467279-88467298 | None:intergenic | 30.0% | |
| CTTTGCGAAAAGAAGAAATT+TGG | - | chr3.3:88466288-88466307 | None:intergenic | 30.0% | |
| GGAATTAGATAAAAAAGGGA+AGG | - | chr3.3:88466149-88466168 | None:intergenic | 30.0% | |
| TACTGAGAAAATCAAAAGAG+AGG | - | chr3.3:88467190-88467209 | None:intergenic | 30.0% | |
| TAGAAAAGATGCTAGAAACT+AGG | + | chr3.3:88464839-88464858 | MS.gene85641:intron | 30.0% | |
| TAGATTCTATGGCAGTATTT+CGG | - | chr3.3:88468429-88468448 | None:intergenic | 30.0% | |
| TATTATCTCATTATCGTGGA+AGG | + | chr3.3:88465383-88465402 | MS.gene85641:intron | 30.0% | |
| TCCTATCCATTATTAGATAC+CGG | + | chr3.3:88465564-88465583 | MS.gene85641:intron | 30.0% | |
| TGACAAAATCATGAAGAGAT+TGG | - | chr3.3:88466367-88466386 | None:intergenic | 30.0% | |
| TGCATATTATCTCATTATCG+TGG | + | chr3.3:88465379-88465398 | MS.gene85641:intron | 30.0% | |
| TGTCTTACTTTGTCTATTGT+AGG | + | chr3.3:88466408-88466427 | MS.gene85641:intron | 30.0% | |
| TGTTCTTGAGAAACTTCAAA+AGG | + | chr3.3:88466743-88466762 | MS.gene85641:CDS | 30.0% | |
| TTATGATCGAACAATTAAGG+AGG | + | chr3.3:88467655-88467674 | MS.gene85641:CDS | 30.0% | |
| TTCAGAAAATTCGTCAAGAT+TGG | - | chr3.3:88466561-88466580 | None:intergenic | 30.0% | |
| ! | AATTTCTTCTTTTCGCAAAG+AGG | + | chr3.3:88466288-88466307 | MS.gene85641:CDS | 30.0% |
| ! | AGACAGTGATGATTCTAAAA+GGG | + | chr3.3:88468168-88468187 | MS.gene85641:CDS | 30.0% |
| ! | AGGCCTATTAATTACAGTTT+TGG | + | chr3.3:88466974-88466993 | MS.gene85641:CDS | 30.0% |
| ! | CCTTCACATTCAAATTTTGA+AGG | + | chr3.3:88464645-88464664 | MS.gene85641:CDS | 30.0% |
| ! | TCTCGTGTTGAGATTTTTAT+GGG | + | chr3.3:88466693-88466712 | MS.gene85641:CDS | 30.0% |
| ! | TGTCTTTGAATGTTATTTGC+AGG | + | chr3.3:88466650-88466669 | MS.gene85641:intron | 30.0% |
| ! | TTTAAAACGCAATCCACAAA+AGG | - | chr3.3:88464752-88464771 | None:intergenic | 30.0% |
| ! | TTTCAGAACTCTTTTTCTTC+TGG | + | chr3.3:88466926-88466945 | MS.gene85641:CDS | 30.0% |
| ! | TTTTAAGCCTTTCTTTGCTT+TGG | - | chr3.3:88464918-88464937 | None:intergenic | 30.0% |
| !! | AAAGCACAAGTATTGAAAAC+AGG | - | chr3.3:88464683-88464702 | None:intergenic | 30.0% |
| !! | GTTTAATTTTTACTCCTACC+AGG | + | chr3.3:88465615-88465634 | MS.gene85641:intron | 30.0% |
| !! | TTAGTTAAAACTGACTTGAC+AGG | + | chr3.3:88467479-88467498 | MS.gene85641:intron | 30.0% |
| !! | TTTAGTCTTAGAGTAATGTG+TGG | + | chr3.3:88467288-88467307 | MS.gene85641:intron | 30.0% |
| !!! | ACGTTGATAACTTTTAGCAA+TGG | + | chr3.3:88467936-88467955 | MS.gene85641:intron | 30.0% |
| !!! | CTTTGTTTTCTCGTCTTATT+TGG | + | chr3.3:88465272-88465291 | MS.gene85641:intron | 30.0% |
| !!! | TTTTGAAGTTTCTCAAGAAC+AGG | - | chr3.3:88466744-88466763 | None:intergenic | 30.0% |
| AAGAAAGCCCAAAACATGTA+AGG | + | chr3.3:88465434-88465453 | MS.gene85641:intron | 35.0% | |
| AAGGCAAATGCAATTTAGCT+TGG | + | chr3.3:88465453-88465472 | MS.gene85641:intron | 35.0% | |
| AATCCACTTGTACCATCTAA+AGG | + | chr3.3:88465843-88465862 | MS.gene85641:CDS | 35.0% | |
| ACAAGAAATCAGTGAAAGTG+AGG | - | chr3.3:88467249-88467268 | None:intergenic | 35.0% | |
| ACGTGTGATATGATGACTAA+TGG | - | chr3.3:88467442-88467461 | None:intergenic | 35.0% | |
| ACTCCATAAATATGCAAGCA+TGG | - | chr3.3:88467008-88467027 | None:intergenic | 35.0% | |
| ACTGCACGATTCTGATAAAT+GGG | + | chr3.3:88465660-88465679 | MS.gene85641:CDS | 35.0% | |
| AGAAAATTCGTCAAGATTGG+TGG | - | chr3.3:88466558-88466577 | None:intergenic | 35.0% | |
| AGAACATGATCAGTTCAACT+CGG | - | chr3.3:88465872-88465891 | None:intergenic | 35.0% | |
| AGAGGAGATATCAAAGTACA+AGG | + | chr3.3:88465950-88465969 | MS.gene85641:CDS | 35.0% | |
| AGATTCTATAGTAAGGAGAG+TGG | + | chr3.3:88464867-88464886 | MS.gene85641:intron | 35.0% | |
| AGATTCTATGGCAGTATTTC+GGG | - | chr3.3:88468428-88468447 | None:intergenic | 35.0% | |
| AGTGTTTCCCATTGAAAGTT+GGG | - | chr3.3:88466533-88466552 | None:intergenic | 35.0% | |
| ATCACTTCCCAACTTTCAAT+GGG | + | chr3.3:88466523-88466542 | MS.gene85641:CDS | 35.0% | |
| ATCCAACTGATGTCATAAAG+AGG | - | chr3.3:88467593-88467612 | None:intergenic | 35.0% | |
| ATCCACTTGTACCATCTAAA+GGG | + | chr3.3:88465844-88465863 | MS.gene85641:CDS | 35.0% | |
| CAATAAATCGTATCAGCAAC+GGG | - | chr3.3:88465773-88465792 | None:intergenic | 35.0% | |
| CAGACAGTGATGATTCTAAA+AGG | + | chr3.3:88468167-88468186 | MS.gene85641:CDS | 35.0% | |
| CAGATAGAACATGAACCAAT+GGG | - | chr3.3:88467720-88467739 | None:intergenic | 35.0% | |
| CATGCAGTTTCTTATCCAAA+AGG | + | chr3.3:88468307-88468326 | MS.gene85641:CDS | 35.0% | |
| CCAAAACACATATCAGAGAA+TGG | - | chr3.3:88468016-88468035 | None:intergenic | 35.0% | |
| CTCAGATTGTGTGTTTCAAT+GGG | - | chr3.3:88467888-88467907 | None:intergenic | 35.0% | |
| GAAAGATATGGAGAGTAATG+AGG | + | chr3.3:88464959-88464978 | MS.gene85641:intron | 35.0% | |
| GCAATAAATCGTATCAGCAA+CGG | - | chr3.3:88465774-88465793 | None:intergenic | 35.0% | |
| GGCTTGTAGATTCTATAGTA+AGG | + | chr3.3:88464860-88464879 | MS.gene85641:intron | 35.0% | |
| GTTTAATCCTCTCAAAGAGA+AGG | + | chr3.3:88467803-88467822 | MS.gene85641:intron | 35.0% | |
| TACTATTGTTCCTGATTCAG+AGG | + | chr3.3:88468447-88468466 | MS.gene85641:CDS | 35.0% | |
| TATCACTTCCCAACTTTCAA+TGG | + | chr3.3:88466522-88466541 | MS.gene85641:CDS | 35.0% | |
| TCTCAGATTGTGTGTTTCAA+TGG | - | chr3.3:88467889-88467908 | None:intergenic | 35.0% | |
| TCTCCATGCTTGCATATTTA+TGG | + | chr3.3:88467002-88467021 | MS.gene85641:intron | 35.0% | |
| TGCAGTTTCTTATCCAAAAG+GGG | + | chr3.3:88468309-88468328 | MS.gene85641:CDS | 35.0% | |
| TGCTTGCATATTTATGGAGT+TGG | + | chr3.3:88467008-88467027 | MS.gene85641:intron | 35.0% | |
| TTATGTTCAGCAACATGATG+TGG | + | chr3.3:88466228-88466247 | MS.gene85641:intron | 35.0% | |
| TTGAACTGATGCTTAGCAAA+AGG | + | chr3.3:88468074-88468093 | MS.gene85641:intron | 35.0% | |
| TTGGCATTATGATGCATAGA+GGG | + | chr3.3:88467143-88467162 | MS.gene85641:intron | 35.0% | |
| TTTGGCATTATGATGCATAG+AGG | + | chr3.3:88467142-88467161 | MS.gene85641:intron | 35.0% | |
| ! | AAAGTGAACAGTGTTACTAG+CGG | - | chr3.3:88465256-88465275 | None:intergenic | 35.0% |
| ! | ATTCAAATGCTTGCCTTTTG+TGG | + | chr3.3:88464736-88464755 | MS.gene85641:intron | 35.0% |
| ! | CCATTCTCTGATATGTGTTT+TGG | + | chr3.3:88468013-88468032 | MS.gene85641:intron | 35.0% |
| ! | CTTTTGGATAAGAAACTGCA+TGG | - | chr3.3:88468309-88468328 | None:intergenic | 35.0% |
| ! | GCATTTGCCTTACATGTTTT+GGG | - | chr3.3:88465444-88465463 | None:intergenic | 35.0% |
| ! | GTCTCGTGTTGAGATTTTTA+TGG | + | chr3.3:88466692-88466711 | MS.gene85641:CDS | 35.0% |
| ! | TCTCTAAGAAACTGACTACT+TGG | + | chr3.3:88465692-88465711 | MS.gene85641:CDS | 35.0% |
| ! | TGCATTTGCCTTACATGTTT+TGG | - | chr3.3:88465445-88465464 | None:intergenic | 35.0% |
| !! | ACCGGTATCTAATAATGGAT+AGG | - | chr3.3:88465568-88465587 | None:intergenic | 35.0% |
| !! | GAGAAGCATCAAACAAAATG+TGG | - | chr3.3:88467519-88467538 | None:intergenic | 35.0% |
| !! | TTAAAACTGACTTGACAGGT+CGG | + | chr3.3:88467483-88467502 | MS.gene85641:intron | 35.0% |
| !!! | TATTGCTTTGTTTTGTTGGC+TGG | + | chr3.3:88465788-88465807 | MS.gene85641:intron | 35.0% |
| AAGGATGATGCAATGTAGCA+AGG | - | chr3.3:88467743-88467762 | None:intergenic | 40.0% | |
| AAGTCCGATCTCGATTTCTT+CGG | - | chr3.3:88464599-88464618 | None:intergenic | 40.0% | |
| AGTCAGTTTCTTAGAGAGAG+CGG | - | chr3.3:88465689-88465708 | None:intergenic | 40.0% | |
| ATAACCAGCATCATCACTCT+CGG | - | chr3.3:88468209-88468228 | None:intergenic | 40.0% | |
| CAAAGAAACTAAGGATGGAC+CGG | - | chr3.3:88465586-88465605 | None:intergenic | 40.0% | |
| CACTGCACGATTCTGATAAA+TGG | + | chr3.3:88465659-88465678 | MS.gene85641:CDS | 40.0% | |
| CAGGTGTTTAGTCCATTACT+TGG | + | chr3.3:88464553-88464572 | MS.gene85641:CDS | 40.0% | |
| CCAAGATAGAAACAGAGGAT+CGG | + | chr3.3:88468117-88468136 | MS.gene85641:CDS | 40.0% | |
| CTAAGAAACTGACTACTTGG+TGG | + | chr3.3:88465695-88465714 | MS.gene85641:CDS | 40.0% | |
| CTATAGTAAGGAGAGTGGAT+TGG | + | chr3.3:88464872-88464891 | MS.gene85641:intron | 40.0% | |
| GAATGATGAACATGTGAGTC+AGG | + | chr3.3:88468258-88468277 | MS.gene85641:CDS | 40.0% | |
| GAGTGTTTCCCATTGAAAGT+TGG | - | chr3.3:88466534-88466553 | None:intergenic | 40.0% | |
| GATGGACCGGTATCTAATAA+TGG | - | chr3.3:88465573-88465592 | None:intergenic | 40.0% | |
| GCAGATAGAACATGAACCAA+TGG | - | chr3.3:88467721-88467740 | None:intergenic | 40.0% | |
| GCATCATAATGCCAAACGAA+GGG | - | chr3.3:88467138-88467157 | None:intergenic | 40.0% | |
| GCATTATTGCTTATGCAGAG+AGG | + | chr3.3:88465932-88465951 | MS.gene85641:intron | 40.0% | |
| GTCTGCAGAAACATCTATGT+CGG | - | chr3.3:88468152-88468171 | None:intergenic | 40.0% | |
| GTTGACCAAGATAGAAACAG+AGG | + | chr3.3:88468112-88468131 | MS.gene85641:CDS | 40.0% | |
| TAAGTCTAATCCCACTGAGT+GGG | - | chr3.3:88465044-88465063 | None:intergenic | 40.0% | |
| TACCCTTTAGATGGTACAAG+TGG | - | chr3.3:88465849-88465868 | None:intergenic | 40.0% | |
| TCATACCAATTGAGCAGATG+AGG | + | chr3.3:88467090-88467109 | MS.gene85641:intron | 40.0% | |
| TCCTGATTCAGAGGATGAAT+CGG | + | chr3.3:88468456-88468475 | MS.gene85641:CDS | 40.0% | |
| TGCATCATAATGCCAAACGA+AGG | - | chr3.3:88467139-88467158 | None:intergenic | 40.0% | |
| TGCCTCTTTATGACATCAGT+TGG | + | chr3.3:88467588-88467607 | MS.gene85641:intron | 40.0% | |
| TGGAAGAAACACAGATCAGT+TGG | + | chr3.3:88465292-88465311 | MS.gene85641:intron | 40.0% | |
| TTCTATCTTGGTCAACAGCA+GGG | - | chr3.3:88468108-88468127 | None:intergenic | 40.0% | |
| TTGTCTGTAGTAAATGGCCT+GGG | + | chr3.3:88465156-88465175 | MS.gene85641:intron | 40.0% | |
| TTTCTATCTTGGTCAACAGC+AGG | - | chr3.3:88468109-88468128 | None:intergenic | 40.0% | |
| TTTGTCTGTAGTAAATGGCC+TGG | + | chr3.3:88465155-88465174 | MS.gene85641:intron | 40.0% | |
| ! | ATCAGCTCTAACTTCACAGA+GGG | - | chr3.3:88466012-88466031 | None:intergenic | 40.0% |
| ! | ATCTATTGATGACTCACCCA+TGG | - | chr3.3:88465721-88465740 | None:intergenic | 40.0% |
| ! | CATACTGTTCCAGAAAGCAT+GGG | + | chr3.3:88468367-88468386 | MS.gene85641:CDS | 40.0% |
| ! | GGGTAAATGATGGAAGAGAA+AGG | - | chr3.3:88466609-88466628 | None:intergenic | 40.0% |
| ! | TTGAGATTTTTATGGGCGAC+AGG | + | chr3.3:88466700-88466719 | MS.gene85641:CDS | 40.0% |
| !! | AAAGAGGCCTTTGGAATAGA+TGG | + | chr3.3:88466304-88466323 | MS.gene85641:CDS | 40.0% |
| !! | AGGTTAGCAAGAGAAGCATT+AGG | - | chr3.3:88464628-88464647 | None:intergenic | 40.0% |
| !! | TAAAACTGACTTGACAGGTC+GGG | + | chr3.3:88467484-88467503 | MS.gene85641:intron | 40.0% |
| !! | TCTTTGCTTTAGGTTGCTGA+GGG | + | chr3.3:88465816-88465835 | MS.gene85641:intron | 40.0% |
| ACAGCCGAAGAAATCGAGAT+CGG | + | chr3.3:88464592-88464611 | MS.gene85641:CDS | 45.0% | |
| AGCAGCAGTAAACGATCCAA+TGG | - | chr3.3:88465984-88466003 | None:intergenic | 45.0% | |
| AGGATGTCTGTGTATGTGTG+AGG | + | chr3.3:88467110-88467129 | MS.gene85641:intron | 45.0% | |
| ATAAGCAGCCTTTGCCCTTA+CGG | - | chr3.3:88466505-88466524 | None:intergenic | 45.0% | |
| ATGGAACTCGCACATCCTAT+TGG | + | chr3.3:88466323-88466342 | MS.gene85641:CDS | 45.0% | |
| ATGTAGCTAAACCCACTCAG+TGG | + | chr3.3:88465030-88465049 | MS.gene85641:intron | 45.0% | |
| CAATGGGTGTATCTCAGCAA+TGG | - | chr3.3:88467872-88467891 | None:intergenic | 45.0% | |
| CAGAGGATGAATCGGATGAA+GGG | + | chr3.3:88468464-88468483 | MS.gene85641:CDS | 45.0% | |
| CCATACTGTTCCAGAAAGCA+TGG | + | chr3.3:88468366-88468385 | MS.gene85641:CDS | 45.0% | |
| CTAAGTCTAATCCCACTGAG+TGG | - | chr3.3:88465045-88465064 | None:intergenic | 45.0% | |
| CTTGCACTATTAAAGGGGGT+TGG | + | chr3.3:88467067-88467086 | MS.gene85641:intron | 45.0% | |
| GACATCCTCATCTGCTCAAT+TGG | - | chr3.3:88467098-88467117 | None:intergenic | 45.0% | |
| GCAGAGTCACAGATTGTACA+GGG | + | chr3.3:88466451-88466470 | MS.gene85641:CDS | 45.0% | |
| GCATCATCACTCTCGGATAT+AGG | - | chr3.3:88468202-88468221 | None:intergenic | 45.0% | |
| GCGAGTTCCATCTATTCCAA+AGG | - | chr3.3:88466314-88466333 | None:intergenic | 45.0% | |
| GTACAAGGAGCTTGATCCAT+TGG | + | chr3.3:88465965-88465984 | MS.gene85641:CDS | 45.0% | |
| TCAACTCGGTACCCTTTAGA+TGG | - | chr3.3:88465858-88465877 | None:intergenic | 45.0% | |
| TCAGAGGATGAATCGGATGA+AGG | + | chr3.3:88468463-88468482 | MS.gene85641:CDS | 45.0% | |
| TCCGATTCATCCTCTGAATC+AGG | - | chr3.3:88468460-88468479 | None:intergenic | 45.0% | |
| TCTATCTTGGTCAACAGCAG+GGG | - | chr3.3:88468107-88468126 | None:intergenic | 45.0% | |
| TGAGAATCACAGCAGTAGTG+AGG | + | chr3.3:88468234-88468253 | MS.gene85641:CDS | 45.0% | |
| TGATGAACATGTGAGTCAGG+CGG | + | chr3.3:88468261-88468280 | MS.gene85641:CDS | 45.0% | |
| TGTAGCTAAACCCACTCAGT+GGG | + | chr3.3:88465031-88465050 | MS.gene85641:intron | 45.0% | |
| TTCGGTGATTCGTGTGATTC+AGG | + | chr3.3:88464534-88464553 | MS.gene85641:CDS | 45.0% | |
| ! | ATATCCGAGAGTGATGATGC+TGG | + | chr3.3:88468202-88468221 | MS.gene85641:CDS | 45.0% |
| ! | CATCAGCTCTAACTTCACAG+AGG | - | chr3.3:88466013-88466032 | None:intergenic | 45.0% |
| ! | TCTATGGCAGTATTTCGGGT+AGG | - | chr3.3:88468424-88468443 | None:intergenic | 45.0% |
| ! | TCTTTTCGCAAAGAGGCCTT+TGG | + | chr3.3:88466295-88466314 | MS.gene85641:CDS | 45.0% |
| ! | TGCATGGCTAGAGTGTTCTT+CGG | - | chr3.3:88468293-88468312 | None:intergenic | 45.0% |
| ! | TTACTAGAGCGAACCCCTTT+TGG | - | chr3.3:88468325-88468344 | None:intergenic | 45.0% |
| !! | AGTAAGGAGAGTGGATTGGA+TGG | + | chr3.3:88464876-88464895 | MS.gene85641:intron | 45.0% |
| !! | CCATGCTTTCTGGAACAGTA+TGG | - | chr3.3:88468369-88468388 | None:intergenic | 45.0% |
| !! | CCGATCCTCTGTTTCTATCT+TGG | - | chr3.3:88468120-88468139 | None:intergenic | 45.0% |
| !! | CTCTTTGCTTTAGGTTGCTG+AGG | + | chr3.3:88465815-88465834 | MS.gene85641:intron | 45.0% |
| !! | CTTTGCTTTAGGTTGCTGAG+GGG | + | chr3.3:88465817-88465836 | MS.gene85641:intron | 45.0% |
| !! | TTTCTGGAACAGTATGGCCA+GGG | - | chr3.3:88468363-88468382 | None:intergenic | 45.0% |
| !! | TAATATTAAAAACAAATAAA+GGG | - | chr3.3:88466819-88466838 | None:intergenic | 5.0% |
| !! | TATATATTAATTCTTTAAAT+TGG | + | chr3.3:88465484-88465503 | MS.gene85641:intron | 5.0% |
| !! | TTAATATTAAAAACAAATAA+AGG | - | chr3.3:88466820-88466839 | None:intergenic | 5.0% |
| AACAGGTGGTATTCCCTGGT+AGG | - | chr3.3:88465632-88465651 | None:intergenic | 50.0% | |
| AAGGGGTTCGCTCTAGTAAG+CGG | + | chr3.3:88468326-88468345 | MS.gene85641:CDS | 50.0% | |
| AATGGCCTGGGAAAAAGCAG+TGG | + | chr3.3:88465168-88465187 | MS.gene85641:intron | 50.0% | |
| ACTCCAAACCGTAAGGGCAA+AGG | + | chr3.3:88466494-88466513 | MS.gene85641:CDS | 50.0% | |
| AGTCTCCACTCCAAACCGTA+AGG | + | chr3.3:88466487-88466506 | MS.gene85641:CDS | 50.0% | |
| CGCAGAGTCACAGATTGTAC+AGG | + | chr3.3:88466450-88466469 | MS.gene85641:CDS | 50.0% | |
| GCAGTCAAACCCATGCTTTC+TGG | - | chr3.3:88468379-88468398 | None:intergenic | 50.0% | |
| GCTTGCTCCTTCTCTTTGAG+AGG | - | chr3.3:88467813-88467832 | None:intergenic | 50.0% | |
| GTCTCCACTCCAAACCGTAA+GGG | + | chr3.3:88466488-88466507 | MS.gene85641:CDS | 50.0% | |
| TACCAACAGGTGGTATTCCC+TGG | - | chr3.3:88465636-88465655 | None:intergenic | 50.0% | |
| TACCAGGGAATACCACCTGT+TGG | + | chr3.3:88465631-88465650 | MS.gene85641:intron | 50.0% | |
| TCGTGCAGTGCTTTACCAAC+AGG | - | chr3.3:88465649-88465668 | None:intergenic | 50.0% | |
| TGCAGTGCTTTACCAACAGG+TGG | - | chr3.3:88465646-88465665 | None:intergenic | 50.0% | |
| ! | AACTGACTACTTGGTGGCCA+TGG | + | chr3.3:88465701-88465720 | MS.gene85641:CDS | 50.0% |
| ! | ACTGACTACTTGGTGGCCAT+GGG | + | chr3.3:88465702-88465721 | MS.gene85641:CDS | 50.0% |
| ! | TTTGCCCTTACGGTTTGGAG+TGG | - | chr3.3:88466495-88466514 | None:intergenic | 50.0% |
| !! | AAGGAGAGTGGATTGGATGG+AGG | + | chr3.3:88464879-88464898 | MS.gene85641:intron | 50.0% |
| !! | AGGAGAGTGGATTGGATGGA+GGG | + | chr3.3:88464880-88464899 | MS.gene85641:intron | 50.0% |
| !! | CTTTCTGGAACAGTATGGCC+AGG | - | chr3.3:88468364-88468383 | None:intergenic | 50.0% |
| !!! | GCTTTGTTTTGTTGGCTGGC+TGG | + | chr3.3:88465792-88465811 | MS.gene85641:intron | 50.0% |
| CAGCCTTTGCCCTTACGGTT+TGG | - | chr3.3:88466500-88466519 | None:intergenic | 55.0% | |
| CGCTCTAGTAAGCGGATAGC+TGG | + | chr3.3:88468334-88468353 | MS.gene85641:CDS | 55.0% | |
| GCCTGGGAAAAAGCAGTGGA+GGG | + | chr3.3:88465172-88465191 | MS.gene85641:intron | 55.0% | |
| ! | GCTGGCTGGCTCTTTGCTTT+AGG | + | chr3.3:88465806-88465825 | MS.gene85641:intron | 55.0% |
| ! | TGTGTGAGGTGCCCTTCGTT+TGG | + | chr3.3:88467124-88467143 | MS.gene85641:intron | 55.0% |
| !!! | ACCCTCCACTGCTTTTTCCC+AGG | - | chr3.3:88465176-88465195 | None:intergenic | 55.0% |
| AAGCGGATAGCTGGAGTCCC+TGG | + | chr3.3:88468343-88468362 | MS.gene85641:CDS | 60.0% | |
| CACGCTCTTGTCGCACTCGA+AGG | + | chr3.3:88466954-88466973 | MS.gene85641:CDS | 60.0% | |
| GGCCTGGGAAAAAGCAGTGG+AGG | + | chr3.3:88465171-88465190 | MS.gene85641:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88464520 | 88468504 | 88464520 | ID=MS.gene85641 |
| chr3.3 | mRNA | 88464520 | 88468504 | 88464520 | ID=MS.gene85641.t1;Parent=MS.gene85641 |
| chr3.3 | exon | 88464520 | 88464666 | 88464520 | ID=MS.gene85641.t1.exon1;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88464520 | 88464666 | 88464520 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88465637 | 88465723 | 88465637 | ID=MS.gene85641.t1.exon2;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88465637 | 88465723 | 88465637 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88465828 | 88465865 | 88465828 | ID=MS.gene85641.t1.exon3;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88465828 | 88465865 | 88465828 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88465950 | 88466031 | 88465950 | ID=MS.gene85641.t1.exon4;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88465950 | 88466031 | 88465950 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88466238 | 88466344 | 88466238 | ID=MS.gene85641.t1.exon5;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88466238 | 88466344 | 88466238 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88466430 | 88466586 | 88466430 | ID=MS.gene85641.t1.exon6;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88466430 | 88466586 | 88466430 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88466672 | 88466764 | 88466672 | ID=MS.gene85641.t1.exon7;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88466672 | 88466764 | 88466672 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88466872 | 88466995 | 88466872 | ID=MS.gene85641.t1.exon8;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88466872 | 88466995 | 88466872 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88467651 | 88467693 | 88467651 | ID=MS.gene85641.t1.exon9;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88467651 | 88467693 | 88467651 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| chr3.3 | exon | 88468090 | 88468504 | 88468090 | ID=MS.gene85641.t1.exon10;Parent=MS.gene85641.t1 |
| chr3.3 | CDS | 88468090 | 88468504 | 88468090 | ID=cds.MS.gene85641.t1;Parent=MS.gene85641.t1 |
| Gene Sequence |
| Protein sequence |
