AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86393

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86393.t1 MTR_2g103730 98.888 809 9 0 1 809 1 809 0.0 1666
MS.gene86393.t1 MTR_4g010650 86.279 809 110 1 1 809 1 808 0.0 1485
MS.gene86393.t1 MTR_3g107320 64.234 836 255 11 5 809 4 826 0.0 1079
MS.gene86393.t1 MTR_3g107360 63.164 828 273 11 5 809 4 822 0.0 1063
MS.gene86393.t1 MTR_7g075910 46.368 826 392 16 4 797 297 1103 0.0 734
MS.gene86393.t1 MTR_5g011050 45.738 833 388 17 4 797 36 843 0.0 731
MS.gene86393.t1 MTR_8g033080 45.933 836 392 17 1 797 224 1038 0.0 731
MS.gene86393.t1 MTR_5g011060 45.134 822 403 17 4 797 36 837 0.0 714
MS.gene86393.t1 MTR_5g023050 46.278 806 368 14 50 809 86 872 0.0 712
MS.gene86393.t1 MTR_8g088690 45.476 851 398 20 4 809 13 842 0.0 703
MS.gene86393.t1 MTR_3g114840 44.406 858 412 18 2 809 9 851 0.0 699
MS.gene86393.t1 MTR_2g100250 44.760 811 384 19 5 809 4 756 0.0 651
MS.gene86393.t1 MTR_3g114840 42.911 797 382 18 2 739 9 791 0.0 608
MS.gene86393.t1 MTR_8g016160 41.892 814 389 23 5 809 7 745 0.0 586
MS.gene86393.t1 MTR_8g033080 44.984 618 297 12 1 590 224 826 4.39e-174 523
MS.gene86393.t1 MTR_1g083620 33.054 239 123 9 498 726 477 688 3.77e-23 105
MS.gene86393.t1 MTR_1g083620 28.696 230 119 9 211 427 127 324 6.64e-15 79.3
MS.gene86393.t1 MTR_1g083620 33.054 239 123 9 498 726 737 948 4.48e-23 106
MS.gene86393.t1 MTR_1g083620 28.696 230 119 9 211 427 387 584 4.58e-15 80.1
MS.gene86393.t1 MTR_2g435560 30.242 248 135 8 457 693 600 820 2.40e-18 90.9
MS.gene86393.t1 MTR_2g435560 26.641 259 135 11 211 449 253 476 2.29e-14 77.8
MS.gene86393.t1 MTR_2g435560 30.924 249 132 10 457 693 735 955 2.54e-18 90.9
MS.gene86393.t1 MTR_2g435560 26.641 259 135 11 211 449 388 611 2.04e-14 78.2
MS.gene86393.t1 MTR_5g023040 51.389 72 31 1 324 395 806 873 3.72e-18 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86393.t1 AT3G15730 80.812 813 149 2 1 809 1 810 0.0 1400
MS.gene86393.t1 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MS.gene86393.t1 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MS.gene86393.t1 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MS.gene86393.t1 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MS.gene86393.t1 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MS.gene86393.t1 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MS.gene86393.t1 AT5G25370 65.323 744 249 6 72 809 5 745 0.0 1006
MS.gene86393.t1 AT2G42010 45.742 822 400 16 4 797 269 1072 0.0 738
MS.gene86393.t1 AT2G42010 44.668 844 402 16 4 797 269 1097 0.0 730
MS.gene86393.t1 AT4G00240 45.910 819 403 16 4 797 113 916 0.0 726
MS.gene86393.t1 AT4G00240 47.416 774 373 14 44 797 122 881 0.0 723
MS.gene86393.t1 AT4G00240 47.416 774 373 14 44 797 5 764 0.0 723
MS.gene86393.t1 AT4G11830 45.048 828 405 18 5 797 33 845 0.0 713
MS.gene86393.t1 AT4G11830 46.410 780 377 17 44 797 49 813 0.0 707
MS.gene86393.t1 AT4G11840 44.565 828 409 17 5 797 43 855 0.0 706
MS.gene86393.t1 AT4G11850 44.782 824 409 16 5 797 39 847 0.0 704
MS.gene86393.t1 AT4G11840 44.256 827 383 17 5 797 43 825 0.0 691
MS.gene86393.t1 AT4G35790 45.330 803 379 18 46 809 76 857 0.0 672
MS.gene86393.t1 AT4G35790 44.963 814 377 19 46 809 76 868 0.0 667
MS.gene86393.t1 AT1G55180 40.465 818 408 19 6 809 10 762 0.0 587
MS.gene86393.t1 AT1G55180 41.505 771 391 17 50 809 19 740 0.0 586
MS.gene86393.t1 AT4G35790 45.219 617 290 13 46 627 76 679 7.77e-173 515
MS.gene86393.t1 AT4G11830 44.007 609 304 12 5 590 33 627 2.27e-168 501
MS.gene86393.t1 AT4G11830 43.740 599 300 12 5 580 33 617 3.11e-164 491
MS.gene86393.t1 AT3G05630 27.036 614 289 27 208 725 372 922 8.23e-31 130
MS.gene86393.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene86393.t1 AT3G16785 30.045 223 105 8 221 427 390 577 5.86e-15 79.7
MS.gene86393.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene86393.t1 AT3G16785 30.045 223 105 8 221 427 390 577 5.86e-15 79.7
MS.gene86393.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene86393.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.74e-15 80.1
MS.gene86393.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene86393.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.74e-15 80.1
MS.gene86393.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.90e-19 92.0
MS.gene86393.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.59e-15 80.1
MS.gene86393.t1 AT3G16785 34.483 203 99 8 497 693 756 930 1.03e-18 92.0
MS.gene86393.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.31e-15 80.1

Find 247 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCATTCTTCACTTTC+TGG 0.019872 2.3:+1344661 None:intergenic
GCCTGAACTGATGCACTTTC+TGG 0.110790 2.3:+1345787 None:intergenic
CCTATTGGGGCAACCTTAAT+TGG 0.143828 2.3:-1347224 MS.gene86393:CDS
GAATCAGGTTCTGGTCTTTC+AGG 0.151953 2.3:+1345610 None:intergenic
TACTCATCATCAGAAAATTT+TGG 0.198426 2.3:-1346535 MS.gene86393:CDS
ATCTTAAGTGAAAGCTCTTT+TGG 0.217956 2.3:+1345880 None:intergenic
TCGACGGTGGAGCAGCTTTC+GGG 0.249191 2.3:-1346113 MS.gene86393:CDS
CCTGGTGCTTCAATAGAAAA+AGG 0.253077 2.3:-1346348 MS.gene86393:CDS
GACACCAAGGCTCGTGTTCT+TGG 0.259989 2.3:-1344490 MS.gene86393:CDS
ACCTCCTGCAAGTTGTATAT+TGG 0.269725 2.3:+1346935 None:intergenic
ACCTTCTCCGCTATCCCATT+GGG 0.270807 2.3:-1344564 MS.gene86393:CDS
TAAGGAACTCCAGGAAATTT+AGG 0.271707 2.3:+1347032 None:intergenic
ATCTTTGAATTTCCATGAAT+TGG 0.275511 2.3:+1347119 None:intergenic
ACCAGATTGCTGACAAATAT+TGG 0.280067 2.3:-1344630 MS.gene86393:CDS
TTAGGGTATTAATGCTTGTT+TGG 0.281535 2.3:-1346725 MS.gene86393:CDS
ACGAAACTAAGTAGTAAGTA+TGG 0.282199 2.3:+1344444 None:intergenic
ATCGACGGTGGAGCAGCTTT+CGG 0.285430 2.3:-1346114 MS.gene86393:CDS
AGATAGGTGGGTTGAAATAT+TGG 0.293912 2.3:-1347156 MS.gene86393:CDS
ATGTTTCAAAAGACCGCAAC+TGG 0.294096 2.3:-1347073 MS.gene86393:CDS
TAGCACCATCCATTGATCTT+TGG 0.299079 2.3:+1344821 None:intergenic
TGGTGCCAATTTCTATATTC+TGG 0.302016 2.3:+1346562 None:intergenic
CCATGAATCTGACCCCTTGC+AGG 0.320797 2.3:+1344742 None:intergenic
TAATGCATTCTTCACTTTCT+GGG 0.323254 2.3:+1344662 None:intergenic
GTGAAAGATGATAATCCTAT+TGG 0.323636 2.3:-1347239 MS.gene86393:CDS
ATCAATGGTTGCATAAAGTT+TGG 0.323808 2.3:+1347379 None:intergenic
CCTCCTGCAAGTTGTATATT+GGG 0.327612 2.3:+1346936 None:intergenic
CCAATTAAGGTTGCCCCAAT+AGG 0.334639 2.3:+1347224 None:intergenic
TTTCATCAGCCTAACTTTCC+TGG 0.335279 2.3:-1346366 MS.gene86393:CDS
CCAGCTTTAGCAGCATCTTC+AGG 0.337228 2.3:+1346078 None:intergenic
TTATTTAATCCCACTTCATT+TGG 0.342886 2.3:+1346495 None:intergenic
GTCCCCAATATACAACTTGC+AGG 0.343312 2.3:-1346939 MS.gene86393:CDS
AACCCTATCATTTAGCTAAT+AGG 0.346495 2.3:-1344768 MS.gene86393:CDS
TGATCATCAGGGAAAGTTAC+TGG 0.348678 2.3:+1346168 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 2.3:+1344629 None:intergenic
TGAAAGATGATAATCCTATT+GGG 0.352247 2.3:-1347238 MS.gene86393:CDS
CTGCCTATTAGCTAAATGAT+AGG 0.357619 2.3:+1344765 None:intergenic
TACTGGGGATGGGGTAATAA+TGG 0.358885 2.3:+1346185 None:intergenic
TCACATTTACTGTGCCCATT+TGG 0.361006 2.3:-1347282 MS.gene86393:CDS
CATTCCTGTTGAGGAGGTAT+TGG 0.363727 2.3:-1347192 MS.gene86393:CDS
CACCTTCTCCGCTATCCCAT+TGG 0.367992 2.3:-1344565 MS.gene86393:CDS
CCTGCAAGGGGTCAGATTCA+TGG 0.370010 2.3:-1344742 MS.gene86393:CDS
AGGCACTTAATATACATTAC+AGG 0.372424 2.3:-1346855 MS.gene86393:CDS
ATTGTCCAGAATATAGAAAT+TGG 0.374763 2.3:-1346567 MS.gene86393:CDS
AATGTACGCCCTTCCAATTA+AGG 0.374946 2.3:+1347211 None:intergenic
CCTGAACTGATGCACTTTCT+GGG 0.377490 2.3:+1345788 None:intergenic
ATTCCTGTTGAGGAGGTATT+GGG 0.378380 2.3:-1347191 MS.gene86393:CDS
TAGGGTATTAATGCTTGTTT+GGG 0.385598 2.3:-1346724 MS.gene86393:CDS
CTCTGTCACGCTTCCTTCAC+TGG 0.390332 2.3:+1344537 None:intergenic
CCCAGAAAGTGCATCAGTTC+AGG 0.391340 2.3:-1345788 MS.gene86393:CDS
CACACAAAGACAAGGTTGTA+AGG 0.391884 2.3:-1347000 MS.gene86393:CDS
GCTAAAGCTGGGCTTATTAG+TGG 0.392386 2.3:-1346066 MS.gene86393:CDS
ATTAGAAGTCCTAAATTTCC+TGG 0.394374 2.3:-1347041 MS.gene86393:CDS
GTGATGTCTCCTCCTGGCTT+TGG 0.396802 2.3:+1346786 None:intergenic
AGAACACGAGCCTTGGTGTC+AGG 0.406228 2.3:+1344493 None:intergenic
GGCTTGAAGGTCCCATTGCT+TGG 0.410425 2.3:-1346290 MS.gene86393:CDS
CAGAAAGTGAAGAATGCATT+AGG 0.410724 2.3:-1344660 MS.gene86393:CDS
TTCCACGTCTCTTGATCATC+AGG 0.411607 2.3:+1346156 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 2.3:+1345910 None:intergenic
GTGAATAAAGAACCAATTCA+TGG 0.418317 2.3:-1347131 MS.gene86393:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 2.3:-1344629 MS.gene86393:CDS
CCTGAAGATGCTGCTAAAGC+TGG 0.422903 2.3:-1346078 MS.gene86393:CDS
TCTTCATGCTACAATCTTTG+AGG 0.430433 2.3:-1349225 MS.gene86393:CDS
TGTCTTATGCCCTCGCAATC+CGG 0.432330 2.3:-1346604 MS.gene86393:CDS
TTACTTACCTATCATCATCT+TGG 0.432761 2.3:+1345537 None:intergenic
TTCGGAAAAGTGAATGAAAC+GGG 0.434688 2.3:+1346415 None:intergenic
TTTGAGGAGACAGTTGGATT+CGG 0.439825 2.3:-1347413 MS.gene86393:CDS
CTTTGTGTGTAGAAAGCATA+AGG 0.440268 2.3:+1347014 None:intergenic
ATACTGAGATTTCCTTGGTA+AGG 0.443762 2.3:-1346821 MS.gene86393:CDS
ATTGAAGCACCAGGAAAGTT+AGG 0.444896 2.3:+1346357 None:intergenic
ATATAATCTGAATCAGGTTC+TGG 0.445716 2.3:+1345601 None:intergenic
ATTGAAAATCAATATTTCCT+TGG 0.448120 2.3:-1345967 MS.gene86393:CDS
TTTCCTTGGTAAGGGATTCA+AGG 0.448128 2.3:-1346812 MS.gene86393:CDS
GGAAGGATAACATAATAGAT+AGG 0.450815 2.3:-1346044 MS.gene86393:CDS
GTTCATGCCAAGATGATGAT+AGG 0.452461 2.3:-1345544 MS.gene86393:intron
ATTGTTAGCAAGATTGAAGC+TGG 0.453049 2.3:-1345859 MS.gene86393:CDS
CAAAACTTTGAGGAGACAGT+TGG 0.453252 2.3:-1347419 MS.gene86393:CDS
TTAGATAAGACAAAACTTTG+AGG 0.453476 2.3:-1347429 MS.gene86393:intron
GATATCCACTCAAGGCTTGA+AGG 0.460473 2.3:-1346303 MS.gene86393:CDS
AGCAGCATCTTCAGGAGTCT+CGG 0.461063 2.3:+1346086 None:intergenic
CCACCCAATACCTCCTCAAC+AGG 0.461488 2.3:+1347188 None:intergenic
GCAGCATCTTCAGGAGTCTC+GGG 0.461536 2.3:+1346087 None:intergenic
TCGTGCTTTCTCTAAATCAA+TGG 0.461965 2.3:+1347364 None:intergenic
GCTTGAAGGTCCCATTGCTT+GGG 0.466265 2.3:-1346289 MS.gene86393:CDS
TGTTTATACTGAGATTTCCT+TGG 0.470042 2.3:-1346826 MS.gene86393:CDS
CATTGATCTTTGGTTGATGT+TGG 0.471677 2.3:+1344831 None:intergenic
TCCGCCAAGAACACGAGCCT+TGG 0.472706 2.3:+1344486 None:intergenic
GCTCGCATATAATCTGAATC+AGG 0.474750 2.3:+1345595 None:intergenic
GGATAGCGGAGAAGGTGGCC+AGG 0.478302 2.3:+1344571 None:intergenic
TATTTGACGTTCTTCTGCCT+TGG 0.479379 2.3:-1345670 MS.gene86393:CDS
CCCATTGGGGTTTCCAGTGA+AGG 0.480016 2.3:-1344550 MS.gene86393:CDS
ATATTGGGGACAAAATTGTC+TGG 0.480142 2.3:+1346951 None:intergenic
CAGGGAAAGTTACTGGGGAT+GGG 0.481757 2.3:+1346175 None:intergenic
TACTGAGATTTCCTTGGTAA+GGG 0.486700 2.3:-1346820 MS.gene86393:CDS
GCACTTTCTGGGACACCCTC+AGG 0.486846 2.3:+1345799 None:intergenic
ATATGATATCCGATGCCAAA+TGG 0.487948 2.3:+1347267 None:intergenic
AGCTAATAGGCAGCCTGCAA+GGG 0.491417 2.3:-1344755 MS.gene86393:CDS
TATGATATCCGATGCCAAAT+GGG 0.492675 2.3:+1347268 None:intergenic
AGGAGCATGTTAATCCTCAA+TGG 0.492749 2.3:-1347316 MS.gene86393:CDS
AGATTATATGCGAGCTCAAG+AGG 0.493595 2.3:-1345587 MS.gene86393:CDS
AGGATCTTCCTCAATTCCCT+TGG 0.495088 2.3:+1345699 None:intergenic
AACAAAACATCCCAAGCAAT+GGG 0.497488 2.3:+1346279 None:intergenic
AAAGACCGCAACTGGGCTCT+AGG 0.498162 2.3:-1347065 MS.gene86393:CDS
CCCCAATGGGATAGCGGAGA+AGG 0.498169 2.3:+1344563 None:intergenic
GAGACAGTTGGATTCGGAAA+AGG 0.499116 2.3:-1347407 MS.gene86393:CDS
TGTTTAACTTTGAGCAGAGA+TGG 0.499268 2.3:-1346260 MS.gene86393:CDS
GATCATCAGGGAAAGTTACT+GGG 0.499638 2.3:+1346169 None:intergenic
TCAGGGAAAGTTACTGGGGA+TGG 0.501750 2.3:+1346174 None:intergenic
CTTACCAGCCTCATAGATGT+TGG 0.502263 2.3:-1346908 MS.gene86393:CDS
CCAAGTGTGATGTCTCCTCC+TGG 0.503968 2.3:+1346780 None:intergenic
TCCTTCACTGGAAACCCCAA+TGG 0.508775 2.3:+1344549 None:intergenic
TAGCTAATAGGCAGCCTGCA+AGG 0.513603 2.3:-1344756 MS.gene86393:CDS
GACAAACTCAAGAATATTAG+TGG 0.514424 2.3:-1349200 MS.gene86393:CDS
TTCACTTTCTGGGTGAAGGA+AGG 0.516269 2.3:+1344672 None:intergenic
AGAGACTCTGAAATTGCAAT+GGG 0.517579 2.3:-1344799 MS.gene86393:CDS
AGGGAAAGTTACTGGGGATG+GGG 0.517899 2.3:+1346176 None:intergenic
TTACCAGCCTCATAGATGTT+GGG 0.519232 2.3:-1346907 MS.gene86393:CDS
GATTCAAGGAGGCCAAAGCC+AGG 0.523097 2.3:-1346798 MS.gene86393:CDS
TCAGGGAAGAATTCAAATCC+TGG 0.524099 2.3:+1344511 None:intergenic
TAGAAAGCATAAGGAACTCC+AGG 0.524275 2.3:+1347023 None:intergenic
ACAATGCTTCCACCATCATC+CGG 0.527676 2.3:+1346585 None:intergenic
ATGGAGGAAGCAAGGTGGAA+AGG 0.528791 2.3:-1346241 MS.gene86393:CDS
ACTCAATGCCAAGGGAATTG+AGG 0.529142 2.3:-1345707 MS.gene86393:CDS
TGGTGGTAACATTCTTTCCA+AGG 0.530172 2.3:-1349180 MS.gene86393:intron
TGCCCTCGCAATCCGGATGA+TGG 0.530747 2.3:-1346597 MS.gene86393:CDS
ATTCTTCACTTTCTGGGTGA+AGG 0.535092 2.3:+1344668 None:intergenic
AAGGACCAGAATCATAGAAA+AGG 0.537043 2.3:-1347336 MS.gene86393:CDS
TTGGGGCAACCTTAATTGGA+AGG 0.538056 2.3:-1347220 MS.gene86393:CDS
AACATAAATCATGAAACGCC+TGG 0.540335 2.3:+1345564 None:intergenic
CCTCCCAACATCTATGAGGC+TGG 0.541750 2.3:+1346904 None:intergenic
ACCAAGGCTCGTGTTCTTGG+CGG 0.542154 2.3:-1344487 MS.gene86393:CDS
ACATCCTCCCAACATCTATG+AGG 0.542285 2.3:+1346900 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.542537 2.3:-1344830 MS.gene86393:CDS
ACTCTTGAGCATGATCTCCC+TGG 0.542825 2.3:-1344589 MS.gene86393:CDS
CCACCATCATCCGGATTGCG+AGG 0.547386 2.3:+1346594 None:intergenic
CTAAAGCTGGGCTTATTAGT+GGG 0.547451 2.3:-1346065 MS.gene86393:CDS
ATATGCGAGCTCAAGAGGCC+AGG 0.547877 2.3:-1345582 MS.gene86393:CDS
CACAGTGCACTTCAGAGCCT+CGG 0.549999 2.3:+1346625 None:intergenic
GAACACGAGCCTTGGTGTCA+GGG 0.550469 2.3:+1344494 None:intergenic
GTGGTTCCCATGTGGCCTGA+GGG 0.550831 2.3:-1345814 MS.gene86393:CDS
CTGAAGATGCTGCTAAAGCT+GGG 0.551525 2.3:-1346077 MS.gene86393:CDS
AACTAAGTAGTAAGTATGGG+TGG 0.551950 2.3:+1344448 None:intergenic
TGTCTGGGATATGAGAATCT+TGG 0.552039 2.3:+1346967 None:intergenic
TCAGGTTCTGGTCTTTCAGG+AGG 0.552348 2.3:+1345613 None:intergenic
AAAAGCACAAGAAGGTGTTA+GGG 0.552796 2.3:-1346742 MS.gene86393:CDS
CAGTTCAGGCAATATTAGAC+TGG 0.553731 2.3:-1345774 MS.gene86393:CDS
ATGGCGCAAATTCTGCTACA+TGG 0.553894 2.3:-1349251 MS.gene86393:CDS
CCTTCACTGGAAACCCCAAT+GGG 0.554387 2.3:+1344550 None:intergenic
TGAAAAGACTCATTCCATTG+AGG 0.555517 2.3:+1347302 None:intergenic
TTACTGTGCCCATTTGGCAT+CGG 0.556368 2.3:-1347276 MS.gene86393:CDS
AAGGTGGTCCTAGGGAACCT+TGG 0.556879 2.3:-1346329 MS.gene86393:CDS
GTTCGGAAAAGTGAATGAAA+CGG 0.557902 2.3:+1346414 None:intergenic
AAACAAAACATCCCAAGCAA+TGG 0.559086 2.3:+1346278 None:intergenic
TATTGAAGCACTCAATGCCA+AGG 0.561553 2.3:-1345716 MS.gene86393:CDS
CGAAACTAAGTAGTAAGTAT+GGG 0.562276 2.3:+1344445 None:intergenic
GCAAGATTGAAGCTGGGGAA+AGG 0.562968 2.3:-1345852 MS.gene86393:CDS
TGCCTATTAGCTAAATGATA+GGG 0.565055 2.3:+1344766 None:intergenic
ATATCATGCCAAGGTTCCCT+AGG 0.565440 2.3:+1346321 None:intergenic
TGGTGAGGAAATAGATAGGT+GGG 0.565449 2.3:-1347168 MS.gene86393:CDS
TCCTTGGAAGTTGCTATGCG+TGG 0.566885 2.3:-1345951 MS.gene86393:CDS
GATGTGCTGTGTCCAGAGTT+CGG 0.567045 2.3:+1346397 None:intergenic
TTGTTAGCAAGATTGAAGCT+GGG 0.569020 2.3:-1345858 MS.gene86393:CDS
AGCTGGGCTTATTAGTGGGA+AGG 0.572547 2.3:-1346061 MS.gene86393:CDS
GGAAGCGTGACAGAGCTGCC+AGG 0.573645 2.3:-1344529 MS.gene86393:CDS
GAGCAGAGATGGAGGAAGCA+AGG 0.573687 2.3:-1346249 MS.gene86393:CDS
CACCATCATCCGGATTGCGA+GGG 0.575824 2.3:+1346595 None:intergenic
TAGAGACTCTGAAATTGCAA+TGG 0.576832 2.3:-1344800 MS.gene86393:CDS
AGGCAATATTAGACTGGCAG+AGG 0.578738 2.3:-1345768 MS.gene86393:CDS
CAATATTAGACTGGCAGAGG+AGG 0.580334 2.3:-1345765 MS.gene86393:CDS
CCTTCTCCGCTATCCCATTG+GGG 0.580634 2.3:-1344563 MS.gene86393:CDS
TGGGACACCCTCAGGCCACA+TGG 0.580916 2.3:+1345807 None:intergenic
CCAGGAGGAGACATCACACT+TGG 0.582493 2.3:-1346780 MS.gene86393:CDS
TATTGGGGACAAAATTGTCT+GGG 0.586684 2.3:+1346952 None:intergenic
TTGATGCAATCACAAAAGCA+AGG 0.590614 2.3:-1346875 MS.gene86393:CDS
TGGGGCAACCTTAATTGGAA+GGG 0.592393 2.3:-1347219 MS.gene86393:CDS
TGCTATGCGTGGAGTGCTGA+TGG 0.592466 2.3:-1345940 MS.gene86393:CDS
TAGAGAAAGCACGAGTGGGA+AGG 0.593690 2.3:-1347355 MS.gene86393:CDS
AAGGGCGTACATTCCTGTTG+AGG 0.595296 2.3:-1347201 MS.gene86393:CDS
GATGATGAATACATAATCGT+CGG 0.596091 2.3:-1344859 MS.gene86393:CDS
GATAGCGGAGAAGGTGGCCA+GGG 0.597233 2.3:+1344572 None:intergenic
TGGGTGGTGAGGAAATAGAT+AGG 0.598716 2.3:-1347172 MS.gene86393:CDS
CAGTGAGTTGCCAAATGAAG+TGG 0.600965 2.3:-1346505 MS.gene86393:CDS
TGGGACCTTCAAGCCTTGAG+TGG 0.600994 2.3:+1346298 None:intergenic
CTGCCTTGGCAATCGTGAGG+TGG 0.601677 2.3:-1345656 MS.gene86393:CDS
CAATGGGATAGCGGAGAAGG+TGG 0.603242 2.3:+1344566 None:intergenic
AAGTGAAGAATGCATTAGGA+AGG 0.603278 2.3:-1344656 MS.gene86393:CDS
TGTTAGCAAGATTGAAGCTG+GGG 0.605624 2.3:-1345857 MS.gene86393:CDS
ACTAAGTAGTAAGTATGGGT+GGG 0.609032 2.3:+1344449 None:intergenic
GATTTAGAGAAAGCACGAGT+GGG 0.609235 2.3:-1347359 MS.gene86393:CDS
TGTGGTTCCCATGTGGCCTG+AGG 0.610251 2.3:-1345815 MS.gene86393:CDS
AATCGTGAGGTGGTAAAACA+AGG 0.614433 2.3:-1345646 MS.gene86393:CDS
AAGTAGTAAGTATGGGTGGG+AGG 0.614752 2.3:+1344452 None:intergenic
CTCCTGCAAGTTGTATATTG+GGG 0.614898 2.3:+1346937 None:intergenic
AGGTTTCTTGAAGCATGCCA+AGG 0.615494 2.3:+1344692 None:intergenic
GAAAGATGATAATCCTATTG+GGG 0.615615 2.3:-1347237 MS.gene86393:CDS
TGAGGAGGTATTGGGTGGTG+AGG 0.615634 2.3:-1347183 MS.gene86393:CDS
CAGAGATGGAGGAAGCAAGG+TGG 0.616614 2.3:-1346246 MS.gene86393:CDS
GGCGTACATTCCTGTTGAGG+AGG 0.617287 2.3:-1347198 MS.gene86393:CDS
TCCACGCATAGCAACTTCCA+AGG 0.620565 2.3:+1345950 None:intergenic
GGAGGCATTGATCTCTGTGA+TGG 0.621298 2.3:-1346450 MS.gene86393:CDS
CTTCTGCCTTGGCAATCGTG+AGG 0.622625 2.3:-1345659 MS.gene86393:CDS
GGGACACCCTCAGGCCACAT+GGG 0.624478 2.3:+1345808 None:intergenic
GCTTTCTACACACAAAGACA+AGG 0.625992 2.3:-1347008 MS.gene86393:CDS
GGCACTTAATATACATTACA+GGG 0.626213 2.3:-1346854 MS.gene86393:CDS
TGATTTAGAGAAAGCACGAG+TGG 0.626791 2.3:-1347360 MS.gene86393:CDS
TACTCATGATCAAGAAACTG+AGG 0.627462 2.3:-1346655 MS.gene86393:CDS
TGAATTCTTCCCTGACACCA+AGG 0.627778 2.3:-1344503 MS.gene86393:CDS
AGGGAATTGAGGAAGATCCT+CGG 0.629175 2.3:-1345696 MS.gene86393:CDS
TGGAAACCCCAATGGGATAG+CGG 0.631998 2.3:+1344557 None:intergenic
CTTGGCATGATATCCACTCA+AGG 0.633068 2.3:-1346311 MS.gene86393:CDS
ATGGTTTCCGCATGTCGTTG+TGG 0.633145 2.3:-1344723 MS.gene86393:CDS
GCTAATAGGCAGCCTGCAAG+GGG 0.633258 2.3:-1344754 MS.gene86393:CDS
AGTGAGTTGCCAAATGAAGT+GGG 0.635597 2.3:-1346504 MS.gene86393:CDS
GGTATTAAGCCTGAAGACAT+TGG 0.635944 2.3:-1345919 MS.gene86393:CDS
TTACCACCTCACGATTGCCA+AGG 0.638073 2.3:+1345653 None:intergenic
CAGCTATTTAGATCTATCGA+CGG 0.639348 2.3:-1346129 MS.gene86393:CDS
ATTGAAGCACTCAATGCCAA+GGG 0.639765 2.3:-1345715 MS.gene86393:CDS
ATCAACCAAAGATCAATGGA+TGG 0.639768 2.3:-1344826 MS.gene86393:CDS
AAGGTTCACTGTGTATGTTG+TGG 0.644280 2.3:-1345833 MS.gene86393:CDS
TAATGCCTAGAGCCCAGTTG+CGG 0.646642 2.3:+1347060 None:intergenic
CCTCGCAATCCGGATGATGG+TGG 0.647794 2.3:-1346594 MS.gene86393:CDS
TGTTTGGGATGATAGAACGT+CGG 0.648160 2.3:-1346709 MS.gene86393:CDS
CCTCCTTGAATCCCTTACCA+AGG 0.648283 2.3:+1346809 None:intergenic
GTGGTGAGGAAATAGATAGG+TGG 0.648470 2.3:-1347169 MS.gene86393:CDS
GCTCATACCACAACGACATG+CGG 0.651651 2.3:+1344716 None:intergenic
TCCACGTCTCTTGATCATCA+GGG 0.654558 2.3:+1346157 None:intergenic
TCCCTGATGATCAAGAGACG+TGG 0.655773 2.3:-1346158 MS.gene86393:CDS
CAGCATCTTCAGGAGTCTCG+GGG 0.656506 2.3:+1346088 None:intergenic
TGTTTCAAAAGACCGCAACT+GGG 0.657307 2.3:-1347072 MS.gene86393:CDS
CCAGCCTCATAGATGTTGGG+AGG 0.659901 2.3:-1346904 MS.gene86393:CDS
CCTTGGTAAGGGATTCAAGG+AGG 0.659944 2.3:-1346809 MS.gene86393:CDS
GAAACTGAGGAATTCTTCCG+AGG 0.663978 2.3:-1346642 MS.gene86393:CDS
AAACTCAAGAATATTAGTGG+TGG 0.664304 2.3:-1349197 MS.gene86393:CDS
CTTGAGTGGATATCATGCCA+AGG 0.664717 2.3:+1346312 None:intergenic
CTATTTAGATCTATCGACGG+TGG 0.666597 2.3:-1346126 MS.gene86393:CDS
CCTGTTGAGGAGGTATTGGG+TGG 0.671652 2.3:-1347188 MS.gene86393:CDS
TTAACTTTGAGCAGAGATGG+AGG 0.672683 2.3:-1346257 MS.gene86393:CDS
ATCATCAGGGAAAGTTACTG+GGG 0.676162 2.3:+1346170 None:intergenic
GCATCTTCAAGCTCTCTCAG+AGG 0.687558 2.3:+1346207 None:intergenic
AGACTGGCAGAGGAGGACAA+TGG 0.689150 2.3:-1345758 MS.gene86393:CDS
AAGAACGTCAAATAGTTCCG+AGG 0.694365 2.3:+1345679 None:intergenic
CCCAATATACAACTTGCAGG+AGG 0.700952 2.3:-1346936 MS.gene86393:CDS
TCAAGGAGGCCAAAGCCAGG+AGG 0.704971 2.3:-1346795 MS.gene86393:CDS
TTTCTGATGATGAGTAAACA+TGG 0.707021 2.3:+1346542 None:intergenic
TGTATGTTGTGGTTCCCATG+TGG 0.707881 2.3:-1345822 MS.gene86393:CDS
TCGTTGTGGTATGAGCACCT+TGG 0.762594 2.3:-1344709 MS.gene86393:CDS
ACTTAATATACATTACAGGG+TGG 0.764594 2.3:-1346851 MS.gene86393:CDS
TCGGAAAAGTGAATGAAACG+GGG 0.795326 2.3:+1346416 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATCAAATCTT+CGG + chr2.3:1345154-1345173 None:intergenic 10.0%
!! ATATATTCATTTAGATTATT+AGG - chr2.3:1345583-1345602 MS.gene86393:CDS 10.0%
!! TATATTCATTTAGATTATTA+GGG - chr2.3:1345584-1345603 MS.gene86393:CDS 10.0%
!!! CAAAAATAGAAATATTTTAT+TGG + chr2.3:1348587-1348606 None:intergenic 10.0%
!!! CAATAAAATATTTCTATTTT+TGG - chr2.3:1348585-1348604 MS.gene86393:intron 10.0%
!! ATAAAAGCCAAAAAAAAAAA+AGG + chr2.3:1344560-1344579 None:intergenic 15.0%
!! TAAAAAAAGTAAATCACTTT+AGG - chr2.3:1345399-1345418 MS.gene86393:intron 15.0%
!!! AAACAAAAATATTTTCATCA+GGG + chr2.3:1346130-1346149 None:intergenic 15.0%
!!! ATTTTTTGTGAAAAAGAAAA+AGG - chr2.3:1345176-1345195 MS.gene86393:intron 15.0%
!!! TTGATTTTAAAGTTATTTGT+AGG - chr2.3:1348404-1348423 MS.gene86393:intron 15.0%
!!! TTTTCTTCCTTTTTTTTTTT+TGG - chr2.3:1344550-1344569 MS.gene86393:CDS 15.0%
!!! TTTTTTGTGAAAAAGAAAAA+GGG - chr2.3:1345177-1345196 MS.gene86393:intron 15.0%
!! AAAAGAACATTAAATGTGAT+TGG + chr2.3:1345311-1345330 None:intergenic 20.0%
!! AAAGTTATTTGTAGGATAAA+AGG - chr2.3:1348412-1348431 MS.gene86393:intron 20.0%
!! AAGGAATGTTATACAAAATA+TGG + chr2.3:1348203-1348222 None:intergenic 20.0%
!! ACAAGTTAAGAATCTAAAAA+TGG - chr2.3:1348493-1348512 MS.gene86393:intron 20.0%
!! AGATTCAAATGAACAAATTA+AGG + chr2.3:1345721-1345740 None:intergenic 20.0%
!! AGATTGTAAGAATGAAAAAA+GGG - chr2.3:1345209-1345228 MS.gene86393:intron 20.0%
!! ATCAAAAGAATAGATTGTTA+AGG + chr2.3:1345995-1346014 None:intergenic 20.0%
!! ATTGAAAATCAATATTTCCT+TGG - chr2.3:1347734-1347753 MS.gene86393:intron 20.0%
!! CAACTTATCTAAATGAATAA+GGG + chr2.3:1348649-1348668 None:intergenic 20.0%
!! CTTCAAAAAAAAATTGTGAA+GGG - chr2.3:1345672-1345691 MS.gene86393:CDS 20.0%
!! TAAACTCATAAATGTTTGAA+TGG - chr2.3:1345071-1345090 MS.gene86393:intron 20.0%
!! TAGATTGTAAGAATGAAAAA+AGG - chr2.3:1345208-1345227 MS.gene86393:intron 20.0%
!! TCTTCAAAAAAAAATTGTGA+AGG - chr2.3:1345671-1345690 MS.gene86393:CDS 20.0%
!!! ATGTTTGATTTTAATTGTGA+AGG - chr2.3:1345639-1345658 MS.gene86393:CDS 20.0%
!!! ATTCAATCTGAAATTTTGTT+AGG - chr2.3:1344876-1344895 MS.gene86393:intron 20.0%
!!! CTCAATCATAAAAAAAGTAT+TGG + chr2.3:1348240-1348259 None:intergenic 20.0%
!!! GAAACAAAAATATTTTCATC+AGG + chr2.3:1346131-1346150 None:intergenic 20.0%
!!! GTTAGGTTAATTGTAATTTT+TGG - chr2.3:1344893-1344912 MS.gene86393:intron 20.0%
!!! TGTTTGATTTTAATTGTGAA+GGG - chr2.3:1345640-1345659 MS.gene86393:CDS 20.0%
! ATCTTTGAATTTCCATGAAT+TGG + chr2.3:1346585-1346604 None:intergenic 25.0%
! ATTGTCCAGAATATAGAAAT+TGG - chr2.3:1347134-1347153 MS.gene86393:CDS 25.0%
! CCAACTTATCTAAATGAATA+AGG + chr2.3:1348650-1348669 None:intergenic 25.0%
! CCTTATTCATTTAGATAAGT+TGG - chr2.3:1348647-1348666 MS.gene86393:intron 25.0%
! TACTGTTGTAAATTTCTAAC+TGG - chr2.3:1345522-1345541 MS.gene86393:intron 25.0%
! TGAAAGATGATAATCCTATT+GGG - chr2.3:1346463-1346482 MS.gene86393:CDS 25.0%
! TGAGATTAATAAAAGAAAGC+TGG - chr2.3:1348725-1348744 MS.gene86393:intron 25.0%
! TTAGATAAGACAAAACTTTG+AGG - chr2.3:1346272-1346291 MS.gene86393:CDS 25.0%
! TTATAATATCGCCAATTGTA+TGG - chr2.3:1345464-1345483 MS.gene86393:intron 25.0%
! TTATTTAATCCCACTTCATT+TGG + chr2.3:1347209-1347228 None:intergenic 25.0%
! TTCCTCTGTTAAAAAAAGAT+GGG - chr2.3:1347015-1347034 MS.gene86393:CDS 25.0%
! TTTGTACCTTTATTACATGA+TGG - chr2.3:1346154-1346173 MS.gene86393:CDS 25.0%
!! ATCTTAACCTTGTTCATTTT+AGG - chr2.3:1346013-1346032 MS.gene86393:CDS 25.0%
!! GAAGGATAATTTTTCACTTT+TGG - chr2.3:1346176-1346195 MS.gene86393:CDS 25.0%
!! TACTCATCATCAGAAAATTT+TGG - chr2.3:1347166-1347185 MS.gene86393:CDS 25.0%
!! TCTTAACCTTGTTCATTTTA+GGG - chr2.3:1346014-1346033 MS.gene86393:CDS 25.0%
!!! CAAAAGGTCATTTTAATTTC+AGG + chr2.3:1345760-1345779 None:intergenic 25.0%
!!! CATATGTGTTCATGTTTTTT+GGG + chr2.3:1345862-1345881 None:intergenic 25.0%
!!! GAATTTTTTTTGTCCAAATG+TGG + chr2.3:1348674-1348693 None:intergenic 25.0%
!!! GATGGGATATTTTTAAGAAT+GGG - chr2.3:1345956-1345975 MS.gene86393:CDS 25.0%
!!! TCATATGTGTTCATGTTTTT+TGG + chr2.3:1345863-1345882 None:intergenic 25.0%
!!! TCTGTTATTTGTTTGTTGTA+CGG - chr2.3:1344636-1344655 MS.gene86393:CDS 25.0%
!!! TGATGGGATATTTTTAAGAA+TGG - chr2.3:1345955-1345974 MS.gene86393:CDS 25.0%
AAACTCAAGAATATTAGTGG+TGG - chr2.3:1344504-1344523 MS.gene86393:CDS 30.0%
AACCCTATCATTTAGCTAAT+AGG - chr2.3:1348933-1348952 MS.gene86393:intron 30.0%
ACCAAGAAAATATCCTTTGA+TGG - chr2.3:1348775-1348794 MS.gene86393:intron 30.0%
ACTTAATATACATTACAGGG+TGG - chr2.3:1346850-1346869 MS.gene86393:CDS 30.0%
AGGCACTTAATATACATTAC+AGG - chr2.3:1346846-1346865 MS.gene86393:CDS 30.0%
AGGTTTGAGTAAAATTCATC+TGG + chr2.3:1348323-1348342 None:intergenic 30.0%
ATATAATCTGAATCAGGTTC+TGG + chr2.3:1348103-1348122 None:intergenic 30.0%
ATCAATGGTTGCATAAAGTT+TGG + chr2.3:1346325-1346344 None:intergenic 30.0%
ATCCTTCCATCATGTAATAA+AGG + chr2.3:1346163-1346182 None:intergenic 30.0%
ATGAACACATATGAACTCAA+AGG - chr2.3:1345869-1345888 MS.gene86393:CDS 30.0%
ATTAGAAGTCCTAAATTTCC+TGG - chr2.3:1346660-1346679 MS.gene86393:CDS 30.0%
ATTTGCCCAAAAACTTCTAA+AGG + chr2.3:1345425-1345444 None:intergenic 30.0%
GAAAGATGATAATCCTATTG+GGG - chr2.3:1346464-1346483 MS.gene86393:CDS 30.0%
GACAAACTCAAGAATATTAG+TGG - chr2.3:1344501-1344520 MS.gene86393:CDS 30.0%
GATGATGAATACATAATCGT+CGG - chr2.3:1348842-1348861 MS.gene86393:intron 30.0%
GGAAGGATAACATAATAGAT+AGG - chr2.3:1347657-1347676 MS.gene86393:intron 30.0%
GGCACTTAATATACATTACA+GGG - chr2.3:1346847-1346866 MS.gene86393:CDS 30.0%
GGCGATATTATAAAAATCCA+AGG + chr2.3:1345457-1345476 None:intergenic 30.0%
GGTTTGAGTAAAATTCATCT+GGG + chr2.3:1348322-1348341 None:intergenic 30.0%
GTGAAAGATGATAATCCTAT+TGG - chr2.3:1346462-1346481 MS.gene86393:CDS 30.0%
GTGAATAAAGAACCAATTCA+TGG - chr2.3:1346570-1346589 MS.gene86393:CDS 30.0%
GTTCCTCTGTTAAAAAAAGA+TGG - chr2.3:1347014-1347033 MS.gene86393:CDS 30.0%
TAATGCATTCTTCACTTTCT+GGG + chr2.3:1349042-1349061 None:intergenic 30.0%
TCTTAAAAATATCCCATCAG+AGG + chr2.3:1345954-1345973 None:intergenic 30.0%
TGCCTATTAGCTAAATGATA+GGG + chr2.3:1348938-1348957 None:intergenic 30.0%
TGTTTATACTGAGATTTCCT+TGG - chr2.3:1346875-1346894 MS.gene86393:CDS 30.0%
TTACTTACCTATCATCATCT+TGG + chr2.3:1348167-1348186 None:intergenic 30.0%
! AAAGGATATTTTCTTGGTGA+AGG + chr2.3:1348773-1348792 None:intergenic 30.0%
! AAATGTTTGAATGGTAGTGA+AGG - chr2.3:1345080-1345099 MS.gene86393:intron 30.0%
! ACCATCAAAGGATATTTTCT+TGG + chr2.3:1348779-1348798 None:intergenic 30.0%
! AGAAAATATCCTTTGATGGT+AGG - chr2.3:1348779-1348798 MS.gene86393:intron 30.0%
! ATCTTAAGTGAAAGCTCTTT+TGG + chr2.3:1347824-1347843 None:intergenic 30.0%
! ATTTTCTTGGTGAAGGAAAA+GGG + chr2.3:1348766-1348785 None:intergenic 30.0%
! GAGATTTGTTCTTTCAAACA+TGG - chr2.3:1344975-1344994 MS.gene86393:intron 30.0%
! TACCTTTATTACATGATGGA+AGG - chr2.3:1346158-1346177 MS.gene86393:CDS 30.0%
! TAGGGTATTAATGCTTGTTT+GGG - chr2.3:1346977-1346996 MS.gene86393:CDS 30.0%
! TATTTTCTTGGTGAAGGAAA+AGG + chr2.3:1348767-1348786 None:intergenic 30.0%
! TCATCATCAGAAAATTTTGG+TGG - chr2.3:1347169-1347188 MS.gene86393:CDS 30.0%
! TCTTAAGTGAAAGCTCTTTT+GGG + chr2.3:1347823-1347842 None:intergenic 30.0%
! TTAGGGTATTAATGCTTGTT+TGG - chr2.3:1346976-1346995 MS.gene86393:CDS 30.0%
! TTTCTGATGATGAGTAAACA+TGG + chr2.3:1347162-1347181 None:intergenic 30.0%
!! ATTGGAAAGAAAGTGTTAGA+AGG + chr2.3:1348222-1348241 None:intergenic 30.0%
!! GTTAAAAAAAGATGGGTTGA+TGG - chr2.3:1347022-1347041 MS.gene86393:CDS 30.0%
!! TTAGGCCTTTAGAAGTTTTT+GGG - chr2.3:1345417-1345436 MS.gene86393:intron 30.0%
!! TTTAGGCCTTTAGAAGTTTT+TGG - chr2.3:1345416-1345435 MS.gene86393:intron 30.0%
!!! AACCCATCTTTTTTTAACAG+AGG + chr2.3:1347020-1347039 None:intergenic 30.0%
AAACAAAACATCCCAAGCAA+TGG + chr2.3:1347426-1347445 None:intergenic 35.0%
AACAAAACATCCCAAGCAAT+GGG + chr2.3:1347425-1347444 None:intergenic 35.0%
AACAAACCTGGATCTTTGTT+AGG - chr2.3:1345893-1345912 MS.gene86393:CDS 35.0%
AACATAAATCATGAAACGCC+TGG + chr2.3:1348140-1348159 None:intergenic 35.0%
AAGGACCAGAATCATAGAAA+AGG - chr2.3:1346365-1346384 MS.gene86393:CDS 35.0%
AAGTGAAGAATGCATTAGGA+AGG - chr2.3:1349045-1349064 MS.gene86393:intron 35.0%
AATAGAAAAAGGTGGTCCTA+GGG - chr2.3:1347364-1347383 MS.gene86393:CDS 35.0%
ACATAGCATATGCAGGATAA+AGG + chr2.3:1345834-1345853 None:intergenic 35.0%
ACCAGATTGCTGACAAATAT+TGG - chr2.3:1349071-1349090 MS.gene86393:intron 35.0%
AGACCAGCTTAATGAACAAA+AGG + chr2.3:1345776-1345795 None:intergenic 35.0%
AGTCTACCCTAAAATGAACA+AGG + chr2.3:1346023-1346042 None:intergenic 35.0%
ATACTGAGATTTCCTTGGTA+AGG - chr2.3:1346880-1346899 MS.gene86393:CDS 35.0%
ATATGATATCCGATGCCAAA+TGG + chr2.3:1346437-1346456 None:intergenic 35.0%
ATATTGGGGACAAAATTGTC+TGG + chr2.3:1346753-1346772 None:intergenic 35.0%
ATCAACCAAAGATCAATGGA+TGG - chr2.3:1348875-1348894 MS.gene86393:intron 35.0%
ATGAACTTCTGTCTTATCCA+TGG + chr2.3:1345266-1345285 None:intergenic 35.0%
ATGATTGAGCAATGTTCACA+TGG - chr2.3:1348251-1348270 MS.gene86393:intron 35.0%
ATGCACTTATGCTAAAACGA+AGG + chr2.3:1346060-1346079 None:intergenic 35.0%
ATTGTTAGCAAGATTGAAGC+TGG - chr2.3:1347842-1347861 MS.gene86393:intron 35.0%
CAAAAAATTGCAGCTTCACA+TGG + chr2.3:1346608-1346627 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG - chr2.3:1348871-1348890 MS.gene86393:intron 35.0%
CAGAAAGTGAAGAATGCATT+AGG - chr2.3:1349041-1349060 MS.gene86393:intron 35.0%
CAGCTATTTAGATCTATCGA+CGG - chr2.3:1347572-1347591 MS.gene86393:intron 35.0%
CAGTTCAAGTCTTTCTGATA+AGG + chr2.3:1345050-1345069 None:intergenic 35.0%
CCAGATTGCTGACAAATATT+GGG - chr2.3:1349072-1349091 MS.gene86393:intron 35.0%
CTAACGCATGTAAACATAAG+TGG + chr2.3:1346105-1346124 None:intergenic 35.0%
CTAATGCATTCTTCACTTTC+TGG + chr2.3:1349043-1349062 None:intergenic 35.0%
CTAGTTAGTTGGAAGGATAA+AGG - chr2.3:1345104-1345123 MS.gene86393:intron 35.0%
CTGCCTATTAGCTAAATGAT+AGG + chr2.3:1348939-1348958 None:intergenic 35.0%
GAAAAGGAGACCTACTAAAT+AGG + chr2.3:1348286-1348305 None:intergenic 35.0%
GATAAGACAGAAGTTCATCA+AGG - chr2.3:1345268-1345287 MS.gene86393:intron 35.0%
GGATAAAACATAGCATATGC+AGG + chr2.3:1345841-1345860 None:intergenic 35.0%
GTTCGGAAAAGTGAATGAAA+CGG + chr2.3:1347290-1347309 None:intergenic 35.0%
TAAGGAACTCCAGGAAATTT+AGG + chr2.3:1346672-1346691 None:intergenic 35.0%
TACTCATGATCAAGAAACTG+AGG - chr2.3:1347046-1347065 MS.gene86393:CDS 35.0%
TACTGAGATTTCCTTGGTAA+GGG - chr2.3:1346881-1346900 MS.gene86393:CDS 35.0%
TATGATATCCGATGCCAAAT+GGG + chr2.3:1346436-1346455 None:intergenic 35.0%
TATTGGGGACAAAATTGTCT+GGG + chr2.3:1346752-1346771 None:intergenic 35.0%
TCGTGCTTTCTCTAAATCAA+TGG + chr2.3:1346340-1346359 None:intergenic 35.0%
TCTTCATGCTACAATCTTTG+AGG - chr2.3:1344476-1344495 MS.gene86393:CDS 35.0%
TGAAAAGACTCATTCCATTG+AGG + chr2.3:1346402-1346421 None:intergenic 35.0%
TGAATCTATTTGTCACCTGT+CGG - chr2.3:1345734-1345753 MS.gene86393:CDS 35.0%
TGATTGAGCAATGTTCACAT+GGG - chr2.3:1348252-1348271 MS.gene86393:intron 35.0%
TGCACTTATGCTAAAACGAA+GGG + chr2.3:1346059-1346078 None:intergenic 35.0%
TTCGGAAAAGTGAATGAAAC+GGG + chr2.3:1347289-1347308 None:intergenic 35.0%
TTGATGCAATCACAAAAGCA+AGG - chr2.3:1346826-1346845 MS.gene86393:CDS 35.0%
TTGTTAGCAAGATTGAAGCT+GGG - chr2.3:1347843-1347862 MS.gene86393:intron 35.0%
! AAAGGGAAAGTGTAAAGAGA+TGG - chr2.3:1345226-1345245 MS.gene86393:intron 35.0%
! ACGCATTCAATCAGAAGTAT+CGG - chr2.3:1344760-1344779 MS.gene86393:CDS 35.0%
! ATGCTCCTTTTCTATGATTC+TGG + chr2.3:1346373-1346392 None:intergenic 35.0%
! CATTGATCTTTGGTTGATGT+TGG + chr2.3:1348873-1348892 None:intergenic 35.0%
! CTCAAGAAAAAAGCACAAGA+AGG - chr2.3:1346951-1346970 MS.gene86393:CDS 35.0%
! CTTTGTGTGTAGAAAGCATA+AGG + chr2.3:1346690-1346709 None:intergenic 35.0%
! TGACCTTTTGTTCATTAAGC+TGG - chr2.3:1345770-1345789 MS.gene86393:CDS 35.0%
! TGGTGCCAATTTCTATATTC+TGG + chr2.3:1347142-1347161 None:intergenic 35.0%
! TGTTTAACTTTGAGCAGAGA+TGG - chr2.3:1347441-1347460 MS.gene86393:intron 35.0%
!! AAAAAGCACAAGAAGGTGTT+AGG - chr2.3:1346958-1346977 MS.gene86393:CDS 35.0%
!! AAAAGCACAAGAAGGTGTTA+GGG - chr2.3:1346959-1346978 MS.gene86393:CDS 35.0%
!! AGAATTGTGAGTTTTGTAGG+AGG - chr2.3:1347233-1347252 MS.gene86393:CDS 35.0%
!! AGAGACTCTGAAATTGCAAT+GGG - chr2.3:1348902-1348921 MS.gene86393:intron 35.0%
!! AGATAGGTGGGTTGAAATAT+TGG - chr2.3:1346545-1346564 MS.gene86393:CDS 35.0%
!! CGAAGAATTGTGAGTTTTGT+AGG - chr2.3:1347230-1347249 MS.gene86393:CDS 35.0%
!! GGGTCTCAATCATTTTGAAA+AGG + chr2.3:1348302-1348321 None:intergenic 35.0%
!! TAGAGACTCTGAAATTGCAA+TGG - chr2.3:1348901-1348920 MS.gene86393:intron 35.0%
!! TAGATAAGTTGGTCCACATT+TGG - chr2.3:1348658-1348677 MS.gene86393:intron 35.0%
!! TCATCAGAAAATTTTGGTGG+TGG - chr2.3:1347172-1347191 MS.gene86393:CDS 35.0%
!!! ATTGTTTTTGCTCTCTGTGT+TGG - chr2.3:1345346-1345365 MS.gene86393:intron 35.0%
!!! TTTTAGGGTAGACTTTTGCT+TGG - chr2.3:1346029-1346048 MS.gene86393:CDS 35.0%
AAGAACGTCAAATAGTTCCG+AGG + chr2.3:1348025-1348044 None:intergenic 40.0%
AAGGTTCACTGTGTATGTTG+TGG - chr2.3:1347868-1347887 MS.gene86393:intron 40.0%
AATCGTGAGGTGGTAAAACA+AGG - chr2.3:1348055-1348074 MS.gene86393:intron 40.0%
AATGTACGCCCTTCCAATTA+AGG + chr2.3:1346493-1346512 None:intergenic 40.0%
AATGTTATCTTGTGCCCTCA+AGG + chr2.3:1348625-1348644 None:intergenic 40.0%
ACAATCAACAACGACGTACA+TGG + chr2.3:1346213-1346232 None:intergenic 40.0%
ACCTCCTGCAAGTTGTATAT+TGG + chr2.3:1346769-1346788 None:intergenic 40.0%
ACGACGTACATGGGAAATAA+AGG + chr2.3:1346203-1346222 None:intergenic 40.0%
AGATTATATGCGAGCTCAAG+AGG - chr2.3:1348114-1348133 MS.gene86393:intron 40.0%
AGTGAGTTGCCAAATGAAGT+GGG - chr2.3:1347197-1347216 MS.gene86393:CDS 40.0%
ATATCGCCAATTGTATGGCT+AGG - chr2.3:1345469-1345488 MS.gene86393:intron 40.0%
ATCATCAGGGAAAGTTACTG+GGG + chr2.3:1347534-1347553 None:intergenic 40.0%
ATGTTTCAAAAGACCGCAAC+TGG - chr2.3:1346628-1346647 MS.gene86393:CDS 40.0%
ATTCTTCACTTTCTGGGTGA+AGG + chr2.3:1349036-1349055 None:intergenic 40.0%
CAATAGAAAAAGGTGGTCCT+AGG - chr2.3:1347363-1347382 MS.gene86393:CDS 40.0%
CAATCAACAACGACGTACAT+GGG + chr2.3:1346212-1346231 None:intergenic 40.0%
CACAAACCTAACAAAGATCC+AGG + chr2.3:1345902-1345921 None:intergenic 40.0%
CACACAAAGACAAGGTTGTA+AGG - chr2.3:1346701-1346720 MS.gene86393:CDS 40.0%
CAGTTCAGGCAATATTAGAC+TGG - chr2.3:1347927-1347946 MS.gene86393:intron 40.0%
CCCAATATTTGTCAGCAATC+TGG + chr2.3:1349075-1349094 None:intergenic 40.0%
CCTCCTGCAAGTTGTATATT+GGG + chr2.3:1346768-1346787 None:intergenic 40.0%
CCTGGTGCTTCAATAGAAAA+AGG - chr2.3:1347353-1347372 MS.gene86393:CDS 40.0%
CTAAAGCTGGGCTTATTAGT+GGG - chr2.3:1347636-1347655 MS.gene86393:intron 40.0%
CTATGAACTCCTACCATCAA+AGG + chr2.3:1348791-1348810 None:intergenic 40.0%
CTATTTAGATCTATCGACGG+TGG - chr2.3:1347575-1347594 MS.gene86393:intron 40.0%
CTCCTGCAAGTTGTATATTG+GGG + chr2.3:1346767-1346786 None:intergenic 40.0%
GAACTCAAAGGAAACAAACC+TGG - chr2.3:1345881-1345900 MS.gene86393:CDS 40.0%
GATCATCAGGGAAAGTTACT+GGG + chr2.3:1347535-1347554 None:intergenic 40.0%
GCTCGCATATAATCTGAATC+AGG + chr2.3:1348109-1348128 None:intergenic 40.0%
GCTTTCTACACACAAAGACA+AGG - chr2.3:1346693-1346712 MS.gene86393:CDS 40.0%
GGAGACCTACTAAATAGGAA+AGG + chr2.3:1348281-1348300 None:intergenic 40.0%
GGTATTAAGCCTGAAGACAT+TGG - chr2.3:1347782-1347801 MS.gene86393:intron 40.0%
GGTCTCCTTTCCTATTTAGT+AGG - chr2.3:1348273-1348292 MS.gene86393:intron 40.0%
GGTGCTTCAATAGAAAAAGG+TGG - chr2.3:1347356-1347375 MS.gene86393:CDS 40.0%
GTTCATGCCAAGATGATGAT+AGG - chr2.3:1348157-1348176 MS.gene86393:intron 40.0%
TACTATATGATGAGCGAGTG+AGG + chr2.3:1348343-1348362 None:intergenic 40.0%
TAGAAGCCTAGCCATACAAT+TGG + chr2.3:1345478-1345497 None:intergenic 40.0%
TAGAGATGAAGCCAAAACAG+TGG + chr2.3:1344929-1344948 None:intergenic 40.0%
TAGCACCATCCATTGATCTT+TGG + chr2.3:1348883-1348902 None:intergenic 40.0%
TATTTGACGTTCTTCTGCCT+TGG - chr2.3:1348031-1348050 MS.gene86393:intron 40.0%
TCACATTTACTGTGCCCATT+TGG - chr2.3:1346419-1346438 MS.gene86393:CDS 40.0%
TCAGGGAAGAATTCAAATCC+TGG + chr2.3:1349193-1349212 None:intergenic 40.0%
TCGGAAAAGTGAATGAAACG+GGG + chr2.3:1347288-1347307 None:intergenic 40.0%
TGATCATCAGGGAAAGTTAC+TGG + chr2.3:1347536-1347555 None:intergenic 40.0%
TGGTGAGGAAATAGATAGGT+GGG - chr2.3:1346533-1346552 MS.gene86393:CDS 40.0%
TGGTGGTAACATTCTTTCCA+AGG - chr2.3:1344521-1344540 MS.gene86393:CDS 40.0%
TGTTAGCAAGATTGAAGCTG+GGG - chr2.3:1347844-1347863 MS.gene86393:intron 40.0%
TGTTTCAAAAGACCGCAACT+GGG - chr2.3:1346629-1346648 MS.gene86393:CDS 40.0%
TTAACTTTGAGCAGAGATGG+AGG - chr2.3:1347444-1347463 MS.gene86393:intron 40.0%
TTACCAGCCTCATAGATGTT+GGG - chr2.3:1346794-1346813 MS.gene86393:CDS 40.0%
TTTCATCAGCCTAACTTTCC+TGG - chr2.3:1347335-1347354 MS.gene86393:CDS 40.0%
TTTCCTTGGTAAGGGATTCA+AGG - chr2.3:1346889-1346908 MS.gene86393:CDS 40.0%
TTTGAGGAGACAGTTGGATT+CGG - chr2.3:1346288-1346307 MS.gene86393:CDS 40.0%
! AAGTGTAAAGAGATGGTGGT+TGG - chr2.3:1345233-1345252 MS.gene86393:intron 40.0%
! AGGAGCATGTTAATCCTCAA+TGG - chr2.3:1346385-1346404 MS.gene86393:CDS 40.0%
! AGTGTAAAGAGATGGTGGTT+GGG - chr2.3:1345234-1345253 MS.gene86393:intron 40.0%
! ATTGAAGCACCAGGAAAGTT+AGG + chr2.3:1347347-1347366 None:intergenic 40.0%
! ATTGAAGCACTCAATGCCAA+GGG - chr2.3:1347986-1348005 MS.gene86393:intron 40.0%
! CAAAACTTTGAGGAGACAGT+TGG - chr2.3:1346282-1346301 MS.gene86393:CDS 40.0%
! GATTTAGAGAAAGCACGAGT+GGG - chr2.3:1346342-1346361 MS.gene86393:CDS 40.0%
! GTAGAGTTTTGCCACTGTTT+TGG - chr2.3:1344915-1344934 MS.gene86393:intron 40.0%
! TAGAAAGCATAAGGAACTCC+AGG + chr2.3:1346681-1346700 None:intergenic 40.0%
! TATTGAAGCACTCAATGCCA+AGG - chr2.3:1347985-1348004 MS.gene86393:intron 40.0%
! TGATTTAGAGAAAGCACGAG+TGG - chr2.3:1346341-1346360 MS.gene86393:CDS 40.0%
! TGTCTGGGATATGAGAATCT+TGG + chr2.3:1346737-1346756 None:intergenic 40.0%
! TGTTTGGGATGATAGAACGT+CGG - chr2.3:1346992-1347011 MS.gene86393:CDS 40.0%
!! AAGGAAGAAAAGAAGCACCT+TGG + chr2.3:1344541-1344560 None:intergenic 40.0%
!! ATTCCTGTTGAGGAGGTATT+GGG - chr2.3:1346510-1346529 MS.gene86393:CDS 40.0%
!! ATTCTTAACTTGTGCCCTGA+GGG + chr2.3:1348486-1348505 None:intergenic 40.0%
!! CCTTTTTCTATTGAAGCACC+AGG + chr2.3:1347356-1347375 None:intergenic 40.0%
!! CTTCTTAACTTGTGCCTTGA+GGG - chr2.3:1348608-1348627 MS.gene86393:intron 40.0%
!! GTAGTGAAGGACTAGTTAGT+TGG - chr2.3:1345093-1345112 MS.gene86393:intron 40.0%
!! TCATTCACTTTTCCGAACTC+TGG - chr2.3:1347292-1347311 MS.gene86393:CDS 40.0%
!! TGAAGGACTAGTTAGTTGGA+AGG - chr2.3:1345097-1345116 MS.gene86393:intron 40.0%
!!! CATTTTAATTTCAGGCCGAC+AGG + chr2.3:1345752-1345771 None:intergenic 40.0%
AAGTAGTAAGTATGGGTGGG+AGG + chr2.3:1349252-1349271 None:intergenic 45.0%
ACAATGCTTCCACCATCATC+CGG + chr2.3:1347119-1347138 None:intergenic 45.0%
ACATCCTCCCAACATCTATG+AGG + chr2.3:1346804-1346823 None:intergenic 45.0%
ACTCAATGCCAAGGGAATTG+AGG - chr2.3:1347994-1348013 MS.gene86393:intron 45.0%
AGGATCTTCCTCAATTCCCT+TGG + chr2.3:1348005-1348024 None:intergenic 45.0%
AGGCAATATTAGACTGGCAG+AGG - chr2.3:1347933-1347952 MS.gene86393:intron 45.0%
AGGGAATTGAGGAAGATCCT+CGG - chr2.3:1348005-1348024 MS.gene86393:intron 45.0%
AGGTTTCTTGAAGCATGCCA+AGG + chr2.3:1349012-1349031 None:intergenic 45.0%
ATATCATGCCAAGGTTCCCT+AGG + chr2.3:1347383-1347402 None:intergenic 45.0%
ATCCTTATCGAAGCCTCTGA+TGG - chr2.3:1345938-1345957 MS.gene86393:CDS 45.0%
ATGGCGCAAATTCTGCTACA+TGG - chr2.3:1344450-1344469 MS.gene86393:CDS 45.0%
CAATATTAGACTGGCAGAGG+AGG - chr2.3:1347936-1347955 MS.gene86393:intron 45.0%
CAGTGAGTTGCCAAATGAAG+TGG - chr2.3:1347196-1347215 MS.gene86393:CDS 45.0%
CCAATTAAGGTTGCCCCAAT+AGG + chr2.3:1346480-1346499 None:intergenic 45.0%
CCCAATATACAACTTGCAGG+AGG - chr2.3:1346765-1346784 MS.gene86393:CDS 45.0%
CCTATTGGGGCAACCTTAAT+TGG - chr2.3:1346477-1346496 MS.gene86393:CDS 45.0%
CCTGAACTGATGCACTTTCT+GGG + chr2.3:1347916-1347935 None:intergenic 45.0%
CTGAAGATGCTGCTAAAGCT+GGG - chr2.3:1347624-1347643 MS.gene86393:intron 45.0%
CTTACCAGCCTCATAGATGT+TGG - chr2.3:1346793-1346812 MS.gene86393:CDS 45.0%
CTTGAGTGGATATCATGCCA+AGG + chr2.3:1347392-1347411 None:intergenic 45.0%
CTTGGCATGATATCCACTCA+AGG - chr2.3:1347390-1347409 MS.gene86393:CDS 45.0%
GAAACTGAGGAATTCTTCCG+AGG - chr2.3:1347059-1347078 MS.gene86393:CDS 45.0%
GAGACAGTTGGATTCGGAAA+AGG - chr2.3:1346294-1346313 MS.gene86393:CDS 45.0%
GATATCCACTCAAGGCTTGA+AGG - chr2.3:1347398-1347417 MS.gene86393:CDS 45.0%
GATGGTAGGAGTTCATAGTG+TGG - chr2.3:1348793-1348812 MS.gene86393:intron 45.0%
GCTAAAGCTGGGCTTATTAG+TGG - chr2.3:1347635-1347654 MS.gene86393:intron 45.0%
GGGCAAATGATTCATCACCT+TGG - chr2.3:1345437-1345456 MS.gene86393:intron 45.0%
GTCCCCAATATACAACTTGC+AGG - chr2.3:1346762-1346781 MS.gene86393:CDS 45.0%
GTGGTGAGGAAATAGATAGG+TGG - chr2.3:1346532-1346551 MS.gene86393:CDS 45.0%
TACTGGGGATGGGGTAATAA+TGG + chr2.3:1347519-1347538 None:intergenic 45.0%
TCCACGTCTCTTGATCATCA+GGG + chr2.3:1347547-1347566 None:intergenic 45.0%
TCCTTATCGAAGCCTCTGAT+GGG - chr2.3:1345939-1345958 MS.gene86393:CDS 45.0%
TGAATTCTTCCCTGACACCA+AGG - chr2.3:1349198-1349217 MS.gene86393:CDS 45.0%
TGGGGCAACCTTAATTGGAA+GGG - chr2.3:1346482-1346501 MS.gene86393:CDS 45.0%
TGGGTGGTGAGGAAATAGAT+AGG - chr2.3:1346529-1346548 MS.gene86393:CDS 45.0%
TGTATGTTGTGGTTCCCATG+TGG - chr2.3:1347879-1347898 MS.gene86393:intron 45.0%
TTACTGTGCCCATTTGGCAT+CGG - chr2.3:1346425-1346444 MS.gene86393:CDS 45.0%
TTCACTTTCTGGGTGAAGGA+AGG + chr2.3:1349032-1349051 None:intergenic 45.0%
TTCCACGTCTCTTGATCATC+AGG + chr2.3:1347548-1347567 None:intergenic 45.0%
TTGGGGCAACCTTAATTGGA+AGG - chr2.3:1346481-1346500 MS.gene86393:CDS 45.0%
! AAAGAGATGGTGGTTGGGAT+TGG - chr2.3:1345239-1345258 MS.gene86393:intron 45.0%
! CATTCCTGTTGAGGAGGTAT+TGG - chr2.3:1346509-1346528 MS.gene86393:CDS 45.0%
! GAATCAGGTTCTGGTCTTTC+AGG + chr2.3:1348094-1348113 None:intergenic 45.0%
! GGGAAAGTGTAAAGAGATGG+TGG - chr2.3:1345229-1345248 MS.gene86393:intron 45.0%
! TGCAAAGCACCAATGTCTTC+AGG + chr2.3:1347794-1347813 None:intergenic 45.0%
!! AGTGTTAACTTGTGCCCTCA+GGG - chr2.3:1348469-1348488 MS.gene86393:intron 45.0%
!! GATTCTTAACTTGTGCCCTG+AGG + chr2.3:1348487-1348506 None:intergenic 45.0%
!! GCTTCTTAACTTGTGCCTTG+AGG - chr2.3:1348607-1348626 MS.gene86393:intron 45.0%
!! TAGTGTTAACTTGTGCCCTC+AGG - chr2.3:1348468-1348487 MS.gene86393:intron 45.0%
ACCTTCTCCGCTATCCCATT+GGG - chr2.3:1349137-1349156 MS.gene86393:intron 50.0%
ACTCTTGAGCATGATCTCCC+TGG - chr2.3:1349112-1349131 MS.gene86393:intron 50.0%
AGCAGCATCTTCAGGAGTCT+CGG + chr2.3:1347618-1347637 None:intergenic 50.0%
AGCTAATAGGCAGCCTGCAA+GGG - chr2.3:1348946-1348965 MS.gene86393:intron 50.0%
AGCTGGGCTTATTAGTGGGA+AGG - chr2.3:1347640-1347659 MS.gene86393:intron 50.0%
AGGGAAAGTTACTGGGGATG+GGG + chr2.3:1347528-1347547 None:intergenic 50.0%
ATGGAGGAAGCAAGGTGGAA+AGG - chr2.3:1347460-1347479 MS.gene86393:intron 50.0%
ATGGTTTCCGCATGTCGTTG+TGG - chr2.3:1348978-1348997 MS.gene86393:intron 50.0%
CAGGGAAAGTTACTGGGGAT+GGG + chr2.3:1347529-1347548 None:intergenic 50.0%
CCTCCTTGAATCCCTTACCA+AGG + chr2.3:1346895-1346914 None:intergenic 50.0%
CCTGAAGATGCTGCTAAAGC+TGG - chr2.3:1347623-1347642 MS.gene86393:intron 50.0%
CCTTCACTGGAAACCCCAAT+GGG + chr2.3:1349154-1349173 None:intergenic 50.0%
CCTTGGTAAGGGATTCAAGG+AGG - chr2.3:1346892-1346911 MS.gene86393:CDS 50.0%
GATGTGCTGTGTCCAGAGTT+CGG + chr2.3:1347307-1347326 None:intergenic 50.0%
GCAAGATTGAAGCTGGGGAA+AGG - chr2.3:1347849-1347868 MS.gene86393:intron 50.0%
GCATCTTCAAGCTCTCTCAG+AGG + chr2.3:1347497-1347516 None:intergenic 50.0%
GCCTGAACTGATGCACTTTC+TGG + chr2.3:1347917-1347936 None:intergenic 50.0%
GCTCATACCACAACGACATG+CGG + chr2.3:1348988-1349007 None:intergenic 50.0%
GCTTGAAGGTCCCATTGCTT+GGG - chr2.3:1347412-1347431 MS.gene86393:CDS 50.0%
TAATGCCTAGAGCCCAGTTG+CGG + chr2.3:1346644-1346663 None:intergenic 50.0%
TAGCTAATAGGCAGCCTGCA+AGG - chr2.3:1348945-1348964 MS.gene86393:intron 50.0%
TCAGGGAAAGTTACTGGGGA+TGG + chr2.3:1347530-1347549 None:intergenic 50.0%
TCCACGCATAGCAACTTCCA+AGG + chr2.3:1347754-1347773 None:intergenic 50.0%
TCCCATCAGAGGCTTCGATA+AGG + chr2.3:1345943-1345962 None:intergenic 50.0%
TCCCTGATGATCAAGAGACG+TGG - chr2.3:1347543-1347562 MS.gene86393:intron 50.0%
TCCTTCACTGGAAACCCCAA+TGG + chr2.3:1349155-1349174 None:intergenic 50.0%
TCCTTGGAAGTTGCTATGCG+TGG - chr2.3:1347750-1347769 MS.gene86393:intron 50.0%
TCGTTGTGGTATGAGCACCT+TGG - chr2.3:1348992-1349011 MS.gene86393:intron 50.0%
TGGAAACCCCAATGGGATAG+CGG + chr2.3:1349147-1349166 None:intergenic 50.0%
TGTCTTATGCCCTCGCAATC+CGG - chr2.3:1347097-1347116 MS.gene86393:CDS 50.0%
TTACCACCTCACGATTGCCA+AGG + chr2.3:1348051-1348070 None:intergenic 50.0%
! AAGGGCGTACATTCCTGTTG+AGG - chr2.3:1346500-1346519 MS.gene86393:CDS 50.0%
! CCAGCTTTAGCAGCATCTTC+AGG + chr2.3:1347626-1347645 None:intergenic 50.0%
! CCCAGAAAGTGCATCAGTTC+AGG - chr2.3:1347913-1347932 MS.gene86393:intron 50.0%
! TAGAGAAAGCACGAGTGGGA+AGG - chr2.3:1346346-1346365 MS.gene86393:CDS 50.0%
! TCAGGTTCTGGTCTTTCAGG+AGG + chr2.3:1348091-1348110 None:intergenic 50.0%
!! GGAGGCATTGATCTCTGTGA+TGG - chr2.3:1347251-1347270 MS.gene86393:CDS 50.0%
AAAGACCGCAACTGGGCTCT+AGG - chr2.3:1346636-1346655 MS.gene86393:CDS 55.0%
AAGGTGGTCCTAGGGAACCT+TGG - chr2.3:1347372-1347391 MS.gene86393:CDS 55.0%
ACCAAGGCTCGTGTTCTTGG+CGG - chr2.3:1349214-1349233 MS.gene86393:CDS 55.0%
AGACTGGCAGAGGAGGACAA+TGG - chr2.3:1347943-1347962 MS.gene86393:intron 55.0%
ATATGCGAGCTCAAGAGGCC+AGG - chr2.3:1348119-1348138 MS.gene86393:intron 55.0%
ATCGACGGTGGAGCAGCTTT+CGG - chr2.3:1347587-1347606 MS.gene86393:intron 55.0%
CACAGTGCACTTCAGAGCCT+CGG + chr2.3:1347079-1347098 None:intergenic 55.0%
CACCATCATCCGGATTGCGA+GGG + chr2.3:1347109-1347128 None:intergenic 55.0%
CACCTTCTCCGCTATCCCAT+TGG - chr2.3:1349136-1349155 MS.gene86393:intron 55.0%
CAGAGATGGAGGAAGCAAGG+TGG - chr2.3:1347455-1347474 MS.gene86393:intron 55.0%
CAGCATCTTCAGGAGTCTCG+GGG + chr2.3:1347616-1347635 None:intergenic 55.0%
CCAAGTGTGATGTCTCCTCC+TGG + chr2.3:1346924-1346943 None:intergenic 55.0%
CCACCCAATACCTCCTCAAC+AGG + chr2.3:1346516-1346535 None:intergenic 55.0%
CCAGCCTCATAGATGTTGGG+AGG - chr2.3:1346797-1346816 MS.gene86393:CDS 55.0%
CCAGGAGGAGACATCACACT+TGG - chr2.3:1346921-1346940 MS.gene86393:CDS 55.0%
CCATGAATCTGACCCCTTGC+AGG + chr2.3:1348962-1348981 None:intergenic 55.0%
CCCATTGGGGTTTCCAGTGA+AGG - chr2.3:1349151-1349170 MS.gene86393:intron 55.0%
CCTCCCAACATCTATGAGGC+TGG + chr2.3:1346800-1346819 None:intergenic 55.0%
CCTGCAAGGGGTCAGATTCA+TGG - chr2.3:1348959-1348978 MS.gene86393:intron 55.0%
CCTTCTCCGCTATCCCATTG+GGG - chr2.3:1349138-1349157 MS.gene86393:intron 55.0%
CTCTGTCACGCTTCCTTCAC+TGG + chr2.3:1349167-1349186 None:intergenic 55.0%
CTTCTGCCTTGGCAATCGTG+AGG - chr2.3:1348042-1348061 MS.gene86393:intron 55.0%
GACACCAAGGCTCGTGTTCT+TGG - chr2.3:1349211-1349230 MS.gene86393:CDS 55.0%
GAGCAGAGATGGAGGAAGCA+AGG - chr2.3:1347452-1347471 MS.gene86393:intron 55.0%
GATTCAAGGAGGCCAAAGCC+AGG - chr2.3:1346903-1346922 MS.gene86393:CDS 55.0%
GCAGCATCTTCAGGAGTCTC+GGG + chr2.3:1347617-1347636 None:intergenic 55.0%
GCTAATAGGCAGCCTGCAAG+GGG - chr2.3:1348947-1348966 MS.gene86393:intron 55.0%
GGCGTACATTCCTGTTGAGG+AGG - chr2.3:1346503-1346522 MS.gene86393:CDS 55.0%
GGCTTGAAGGTCCCATTGCT+TGG - chr2.3:1347411-1347430 MS.gene86393:CDS 55.0%
GTGATGTCTCCTCCTGGCTT+TGG + chr2.3:1346918-1346937 None:intergenic 55.0%
TGGGACCTTCAAGCCTTGAG+TGG + chr2.3:1347406-1347425 None:intergenic 55.0%
!! AGAACACGAGCCTTGGTGTC+AGG + chr2.3:1349211-1349230 None:intergenic 55.0%
!! CAATGGGATAGCGGAGAAGG+TGG + chr2.3:1349138-1349157 None:intergenic 55.0%
!! CCTGTTGAGGAGGTATTGGG+TGG - chr2.3:1346513-1346532 MS.gene86393:CDS 55.0%
!! GAACACGAGCCTTGGTGTCA+GGG + chr2.3:1349210-1349229 None:intergenic 55.0%
!! TGAAGCACCGACACAGACAC+CGG - chr2.3:1344668-1344687 MS.gene86393:CDS 55.0%
!! TGAGGAGGTATTGGGTGGTG+AGG - chr2.3:1346518-1346537 MS.gene86393:CDS 55.0%
!! TGCTATGCGTGGAGTGCTGA+TGG - chr2.3:1347761-1347780 MS.gene86393:intron 55.0%
!! TGGTGGTTGGGATTGGTCCA+TGG - chr2.3:1345246-1345265 MS.gene86393:intron 55.0%
CATCCGTCCGGTGTCTGTGT+CGG + chr2.3:1344678-1344697 None:intergenic 60.0%
CCACCATCATCCGGATTGCG+AGG + chr2.3:1347110-1347129 None:intergenic 60.0%
CTGCCTTGGCAATCGTGAGG+TGG - chr2.3:1348045-1348064 MS.gene86393:intron 60.0%
GTGGTTCCCATGTGGCCTGA+GGG - chr2.3:1347887-1347906 MS.gene86393:intron 60.0%
TCAAGGAGGCCAAAGCCAGG+AGG - chr2.3:1346906-1346925 MS.gene86393:CDS 60.0%
TCCGCCAAGAACACGAGCCT+TGG + chr2.3:1349218-1349237 None:intergenic 60.0%
TCGACGGTGGAGCAGCTTTC+GGG - chr2.3:1347588-1347607 MS.gene86393:intron 60.0%
TGCCCTCGCAATCCGGATGA+TGG - chr2.3:1347104-1347123 MS.gene86393:CDS 60.0%
TGCTGACGTGTCCATCCGTC+CGG + chr2.3:1344690-1344709 None:intergenic 60.0%
TGTGGTTCCCATGTGGCCTG+AGG - chr2.3:1347886-1347905 MS.gene86393:intron 60.0%
! CCTCGCAATCCGGATGATGG+TGG - chr2.3:1347107-1347126 MS.gene86393:CDS 60.0%
!! CCCCAATGGGATAGCGGAGA+AGG + chr2.3:1349141-1349160 None:intergenic 60.0%
!! GATAGCGGAGAAGGTGGCCA+GGG + chr2.3:1349132-1349151 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+AGG + chr2.3:1347905-1347924 None:intergenic 60.0%
CGACACAGACACCGGACGGA+TGG - chr2.3:1344676-1344695 MS.gene86393:CDS 65.0%
GGGACACCCTCAGGCCACAT+GGG + chr2.3:1347896-1347915 None:intergenic 65.0%
TGGGACACCCTCAGGCCACA+TGG + chr2.3:1347897-1347916 None:intergenic 65.0%
! GCACCGACACAGACACCGGA+CGG - chr2.3:1344672-1344691 MS.gene86393:CDS 65.0%
! GGAAGCGTGACAGAGCTGCC+AGG - chr2.3:1349172-1349191 MS.gene86393:intron 65.0%
!! GGATAGCGGAGAAGGTGGCC+AGG + chr2.3:1349133-1349152 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 1344450 1349273 1344450 ID=MS.gene86393
chr2.3 mRNA 1344450 1349273 1344450 ID=MS.gene86393.t1;Parent=MS.gene86393
chr2.3 exon 1349181 1349273 1349181 ID=MS.gene86393.t1.exon1;Parent=MS.gene86393.t1
chr2.3 CDS 1349181 1349273 1349181 ID=cds.MS.gene86393.t1;Parent=MS.gene86393.t1
chr2.3 exon 1345545 1347447 1345545 ID=MS.gene86393.t1.exon2;Parent=MS.gene86393.t1
chr2.3 CDS 1345545 1347447 1345545 ID=cds.MS.gene86393.t1;Parent=MS.gene86393.t1
chr2.3 exon 1344450 1344883 1344450 ID=MS.gene86393.t1.exon3;Parent=MS.gene86393.t1
chr2.3 CDS 1344450 1344883 1344450 ID=cds.MS.gene86393.t1;Parent=MS.gene86393.t1
Gene Sequence

>MS.gene86393

ATGGCGCAAATTCTGCTACATGGAACTCTTCATGCTACAATCTTTGAGGTCGACAAACTCAAGAATATTAGTGGTGGTAACATTCTTTCCAAGGTGCTTCTTTTCTTCCTTTTTTTTTTTTGGCTTTTATTATCATTTTTTCAACTACTTGCTAACTGTTTTTTTACTTAACTTAGTTCTTATGTTTCTGTTATTTGTTTGTTGTACGGTTAGATCTATGAAGCACCGACACAGACACCGGACGGATGGACACGTCAGCACTGATAATATAAATTAATTGAATGTAATCACTAGTGTCTGTCGTGCACACACGCATTCAATCAGAAGTATCGGTGCTACTGAGATTAGATCATATAATTTAACAAAATTAGTGCAGTAGTTTGTTGTTAATCTCATCAATTTGTGATTCAGATTTCATGATCAATAATTCAATCTGAAATTTTGTTAGGTTAATTGTAATTTTTGGTAGAGTTTTGCCACTGTTTTGGCTTCATCTCTAATCTTCAAATCTGTGATCAGCTTGATGAGATTTGTTCTTTCAAACATGGAGATTGAATTTTCTTTGATCTTTGACTTGTAGCTTGTTGACTTTTCACGCCTTATCAGAAAGACTTGAACTGATAAACTCATAAATGTTTGAATGGTAGTGAAGGACTAGTTAGTTGGAAGGATAAAGGATTAATTTTTTTTTCTTTCTAAGTCCGAAGATTTGATTTTTATTTTTTTATTTTTTGTGAAAAAGAAAAAGGGAAAAAAATTAGATTGTAAGAATGAAAAAAGGGAAAGTGTAAAGAGATGGTGGTTGGGATTGGTCCATGGATAAGACAGAAGTTCATCAAGGCAAGAATATGTTTCTTACCAATCACATTTAATGTTCTTTTGTACTCAGAATCTTGATTGTTTTTGCTCTCTGTGTTGGTGAAATAATTGTTAGAAGAAAATAATAAGCTAAAAAAAGTAAATCACTTTAGGCCTTTAGAAGTTTTTGGGCAAATGATTCATCACCTTGGATTTTTATAATATCGCCAATTGTATGGCTAGGCTTCTAATAACAATATTTTAACGTCATTATTACTGTTGTAAATTTCTAACTGGATTGTAGAGTTTGCTAGCTATTATGTTTCAGACAGTTTATATATTCATTTAGATTATTAGGGATCACATAATGTTTTGCTACTTCAAATGTTTAATGTTTGATTTTAATTGTGAAGGGAAAGTTCTTCTTCAAAAAAAAATTGTGAAGGGAAAGTTTTTACAATGTTCTGCTTCCTTAATTTGTTCATTTGAATCTATTTGTCACCTGTCGGCCTGAAATTAAAATGACCTTTTGTTCATTAAGCTGGTCTTTCAACTCAATAACTTCAAATTTTATCATACTTATCCTTTATCCTGCATATGCTATGTTTTATCCCAAAAAACATGAACACATATGAACTCAAAGGAAACAAACCTGGATCTTTGTTAGGTTTGTGTTAGTAGCTTGACTTCATCCTTATCGAAGCCTCTGATGGGATATTTTTAAGAATGGGTTCGAATGCTTTACCTTAACAATCTATTCTTTTGATCTTAACCTTGTTCATTTTAGGGTAGACTTTTGCTTGGAGCTCCCTTCGTTTTAGCATAAGTGCATGCATATTTTTACTAAAGATCATCCACTTATGTTTACATGCGTTAGTGCCCTGATGAAAATATTTTTGTTTCACTTTTGTACCTTTATTACATGATGGAAGGATAATTTTTCACTTTTGGACCTTTATTTCCCATGTACGTCGTTGTTGATTGTTGATTTATGTGTTGCTAATTACATTCACTTATTCTTTTTTTAGATAAGACAAAACTTTGAGGAGACAGTTGGATTCGGAAAAGGAACTACCAAACTTTATGCAACCATTGATTTAGAGAAAGCACGAGTGGGAAGGACCAGAATCATAGAAAAGGAGCATGTTAATCCTCAATGGAATGAGTCTTTTCACATTTACTGTGCCCATTTGGCATCGGATATCATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGGGCGTACATTCCTGTTGAGGAGGTATTGGGTGGTGAGGAAATAGATAGGTGGGTTGAAATATTGGATGTGAATAAAGAACCAATTCATGGAAATTCAAAGATCCATGTGAAGCTGCAATTTTTTGATGTTTCAAAAGACCGCAACTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATGCTTTCTACACACAAAGACAAGGTTGTAAGGTTTCTCTGTACCAAGATTCTCATATCCCAGACAATTTTGTCCCCAATATACAACTTGCAGGAGGTCAGACTTACCAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACAAAAGCAAGGCACTTAATATACATTACAGGGTGGTCTGTTTATACTGAGATTTCCTTGGTAAGGGATTCAAGGAGGCCAAAGCCAGGAGGAGACATCACACTTGGTGAGCTTCTCAAGAAAAAAGCACAAGAAGGTGTTAGGGTATTAATGCTTGTTTGGGATGATAGAACGTCGGTTCCTCTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACTGAGGAATTCTTCCGAGGCTCTGAAGTGCACTGTGTCTTATGCCCTCGCAATCCGGATGATGGTGGAAGCATTGTCCAGAATATAGAAATTGGCACCATGTTTACTCATCATCAGAAAATTTTGGTGGTGGACAGTGAGTTGCCAAATGAAGTGGGATTAAATAAACGAAGAATTGTGAGTTTTGTAGGAGGCATTGATCTCTGTGATGGAAGATATGATACCCCGTTTCATTCACTTTTCCGAACTCTGGACACAGCACATCATGATGACTTTCATCAGCCTAACTTTCCTGGTGCTTCAATAGAAAAAGGTGGTCCTAGGGAACCTTGGCATGATATCCACTCAAGGCTTGAAGGTCCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTTGTTCCTCTGAGAGAGCTTGAAGATGCCATTATTACCCCATCCCCAGTAACTTTCCCTGATGATCAAGAGACGTGGAATGTTCAGCTATTTAGATCTATCGACGGTGGAGCAGCTTTCGGGTTCCCCGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTATTAGTGGGAAGGATAACATAATAGATAGGAGTATTCAAGATGCTTATATCAATGCTATTCGACGCGCAAAGAATTTCATCTACATTGAAAATCAATATTTCCTTGGAAGTTGCTATGCGTGGAGTGCTGATGGTATTAAGCCTGAAGACATTGGTGCTTTGCATCTGATCCCAAAAGAGCTTTCACTTAAGATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCACTGTGTATGTTGTGGTTCCCATGTGGCCTGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTAGACTGGCAGAGGAGGACAATGGATATGATGTACAAAGATATTATTGAAGCACTCAATGCCAAGGGAATTGAGGAAGATCCTCGGAACTATTTGACGTTCTTCTGCCTTGGCAATCGTGAGGTGGTAAAACAAGGAGAGTACGAGCCTCCTGAAAGACCAGAACCTGATTCAGATTATATGCGAGCTCAAGAGGCCAGGCGTTTCATGATTTATGTTCATGCCAAGATGATGATAGGTAAGTAAAAACATTAAGCTGCCATATTTTGTATAACATTCCTTCTAACACTTTCTTTCCAATACTTTTTTTATGATTGAGCAATGTTCACATGGGTCTCCTTTCCTATTTAGTAGGTCTCCTTTTCAAAATGATTGAGACCCAGATGAATTTTACTCAAACCTCACTCGCTCATCATATAGTAGTCGAGCAATTCTGCAAGCTACACAATTCTCACACAGAATTTTGATTTTAAAGTTATTTGTAGGATAAAAGGAAAAAAATTACTTTATTCTAATTATTCATTGGGTAGTGTTAACTTGTGCCCTCAGGGCACAAGTTAAGAATCTAAAAATGGAATTAAATAATCAATTTTGTCTTGAAAAGATAAGATTTCAAATTTCAAGAATATTGAATGCACAATTTCCAATAAAATATTTCTATTTTTGGCTTCTTAACTTGTGCCTTGAGGGCACAAGATAACATTTCCCTTATTCATTTAGATAAGTTGGTCCACATTTGGACAAAAAAAATTCTTGAGAAGTTTTTTTACTCTTTCAACAAATTTGAGATTAATAAAAGAAAGCTGGTAAGTGTTACAATATCCCTTTTCCTTCACCAAGAAAATATCCTTTGATGGTAGGAGTTCATAGTGTGGTAAAACTAAGTTTGTTGTTTGCAGTTGATGATGAATACATAATCGTCGGATCTGCCAACATCAACCAAAGATCAATGGATGGTGCTAGAGACTCTGAAATTGCAATGGGAGCTTATCAACCCTATCATTTAGCTAATAGGCAGCCTGCAAGGGGTCAGATTCATGGTTTCCGCATGTCGTTGTGGTATGAGCACCTTGGCATGCTTCAAGAAACCTTCCTTCACCCAGAAAGTGAAGAATGCATTAGGAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCTAGCGAGACTCTTGAGCATGATCTCCCTGGCCACCTTCTCCGCTATCCCATTGGGGTTTCCAGTGAAGGAAGCGTGACAGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGGAAAAGTTGATTACCTCCCACCCATACTTACTACTTAG
Protein sequence

>MS.gene86393.t1

MAQILLHGTLHATIFEVDKLKNISGGNILSKIRQNFEETVGFGKGTTKLYATIDLEKARVGRTRIIEKEHVNPQWNESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVEEVLGGEEIDRWVEILDVNKEPIHGNSKIHVKLQFFDVSKDRNWALGIRSPKFPGVPYAFYTQRQGCKVSLYQDSHIPDNFVPNIQLAGGQTYQPHRCWEDVFDAITKARHLIYITGWSVYTEISLVRDSRRPKPGGDITLGELLKKKAQEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEFFRGSEVHCVLCPRNPDDGGSIVQNIEIGTMFTHHQKILVVDSELPNEVGLNKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRELEDAIITPSPVTFPDDQETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDIIEALNAKGIEEDPRNYLTFFCLGNREVVKQGEYEPPERPEPDSDYMRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLANRQPARGQIHGFRMSLWYEHLGMLQETFLHPESEECIRKVNQIADKYWDLYSSETLEHDLPGHLLRYPIGVSSEGSVTELPGFEFFPDTKARVLGGKVDYLPPILTT