Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87621.t1 | XP_013455664.1 | 99.4 | 169 | 1 | 0 | 1 | 169 | 1 | 169 | 1.70E-94 | 355.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87621.t1 | Q5NCF2 | 42.9 | 147 | 69 | 3 | 24 | 168 | 4 | 137 | 8.4e-29 | 128.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87621.t1 | B7FHC8 | 99.4 | 169 | 1 | 0 | 1 | 169 | 1 | 169 | 1.3e-94 | 355.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050750 | MS.gene87621 | -0.82166 | 3.59E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene87621 | -0.826001 | 3.45E-54 | -1.69E-46 |
| MS.gene051924 | MS.gene87621 | 0.800852 | 1.19E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene87621 | -0.822933 | 1.82E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene87621 | 0.814286 | 1.66E-51 | -1.69E-46 |
| MS.gene054405 | MS.gene87621 | -0.824458 | 7.98E-54 | -1.69E-46 |
| MS.gene058223 | MS.gene87621 | 0.800227 | 1.59E-48 | -1.69E-46 |
| MS.gene060634 | MS.gene87621 | 0.818336 | 2.07E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04771 | MS.gene87621 | PPI |
| MS.gene049131 | MS.gene87621 | PPI |
| MS.gene015741 | MS.gene87621 | PPI |
| MS.gene05927 | MS.gene87621 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87621.t1 | MTR_4g048530 | 99.408 | 169 | 1 | 0 | 1 | 169 | 1 | 169 | 1.52e-125 | 350 |
| MS.gene87621.t1 | MTR_8g095450 | 91.228 | 171 | 13 | 1 | 1 | 169 | 1 | 171 | 6.46e-109 | 308 |
| MS.gene87621.t1 | MTR_4g048530 | 97.436 | 117 | 3 | 0 | 1 | 117 | 1 | 117 | 4.17e-83 | 241 |
| MS.gene87621.t1 | MTR_5g075330 | 29.577 | 142 | 83 | 3 | 26 | 166 | 7 | 132 | 1.10e-14 | 67.4 |
| MS.gene87621.t1 | MTR_5g075330 | 29.577 | 142 | 83 | 3 | 26 | 166 | 40 | 165 | 4.23e-14 | 66.6 |
| MS.gene87621.t1 | MTR_8g103680 | 29.078 | 141 | 85 | 3 | 26 | 166 | 79 | 204 | 9.76e-14 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87621.t1 | AT1G51160 | 89.349 | 169 | 18 | 0 | 1 | 169 | 1 | 169 | 1.89e-116 | 327 |
| MS.gene87621.t1 | AT1G51160 | 89.349 | 169 | 18 | 0 | 1 | 169 | 1 | 169 | 1.89e-116 | 327 |
| MS.gene87621.t1 | AT1G51160 | 89.349 | 169 | 18 | 0 | 1 | 169 | 1 | 169 | 1.89e-116 | 327 |
| MS.gene87621.t1 | AT5G02280 | 28.873 | 142 | 84 | 3 | 26 | 166 | 7 | 132 | 4.16e-13 | 63.5 |
Find 46 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGTAGATGTACTTTA+AGG | 0.146124 | 4.1:-48820041 | None:intergenic |
| TAAGTCGTTAACCGCGAAAA+TGG | 0.262446 | 4.1:+48815199 | MS.gene87621:CDS |
| TACATACAAACTTAGTTTCA+TGG | 0.274899 | 4.1:+48816996 | MS.gene87621:CDS |
| TACGCCAAGGTTTCCTTTCT+CGG | 0.300504 | 4.1:-48816926 | None:intergenic |
| TGAAGAAGAATGCAATTCTT+TGG | 0.305795 | 4.1:+48814999 | None:intergenic |
| AGTTTCATGGAAAGTCCTTC+TGG | 0.321603 | 4.1:+48817009 | MS.gene87621:CDS |
| CAAGATCATAAGTTGATGTT+TGG | 0.353145 | 4.1:+48815161 | MS.gene87621:CDS |
| ATCCTAGAACTGGTGATCTT+CGG | 0.365984 | 4.1:+48820014 | MS.gene87621:CDS |
| TCCTAGAACTGGTGATCTTC+GGG | 0.367998 | 4.1:+48820015 | MS.gene87621:CDS |
| GGAAAGTCCTTCTGGAATAA+AGG | 0.375488 | 4.1:+48817017 | MS.gene87621:CDS |
| CCGCCTGCGCCGACGGCATC+GGG | 0.375568 | 4.1:+48815044 | MS.gene87621:CDS |
| ATACACCTGGATCTCCTATC+AGG | 0.385311 | 4.1:+48820095 | MS.gene87621:CDS |
| ACCGCCTGCGCCGACGGCAT+CGG | 0.397640 | 4.1:+48815043 | MS.gene87621:CDS |
| ATATGTTGTATGTGTTCAAT+AGG | 0.401689 | 4.1:+48815078 | MS.gene87621:CDS |
| ATGCAATGCCTCTCACATAT+TGG | 0.429804 | 4.1:-48820757 | None:intergenic |
| GCCGTCGGCGCAGGCGGTGA+CGG | 0.431684 | 4.1:-48815038 | None:intergenic |
| TTTCCCGATGCCGTCGGCGC+AGG | 0.440374 | 4.1:-48815047 | None:intergenic |
| TCCGTCACCGCCTGCGCCGA+CGG | 0.451526 | 4.1:+48815037 | MS.gene87621:CDS |
| CGACTCCATGCAGATTATCT+TGG | 0.465225 | 4.1:+48819985 | MS.gene87621:intron |
| GTTGAGCATTCAACGTATGC+AGG | 0.478044 | 4.1:-48815139 | None:intergenic |
| TTGGTAACTCATCCTAGAAC+TGG | 0.478485 | 4.1:+48820004 | MS.gene87621:CDS |
| CCCGATGCCGTCGGCGCAGG+CGG | 0.494602 | 4.1:-48815044 | None:intergenic |
| TCCCGAAGATCACCAGTTCT+AGG | 0.509037 | 4.1:-48820016 | None:intergenic |
| TTTGCTTGCTTTACAGAGAG+TGG | 0.510438 | 4.1:+48815108 | MS.gene87621:CDS |
| TCTTTGTGCAGTGCCGAGAA+AGG | 0.519539 | 4.1:+48816913 | MS.gene87621:intron |
| CATCTTACCTTTATTCCAGA+AGG | 0.520623 | 4.1:-48817024 | None:intergenic |
| AGAAGAATGCAATTCTTTGG+TGG | 0.520953 | 4.1:+48815002 | None:intergenic |
| TGTTACCTGATAGGAGATCC+AGG | 0.533439 | 4.1:-48820100 | None:intergenic |
| CCGACGGCATCGGGAAACAA+TGG | 0.556241 | 4.1:+48815053 | MS.gene87621:CDS |
| CTTGGCGTACCTCAGTTACC+TGG | 0.557774 | 4.1:+48816940 | MS.gene87621:CDS |
| AACTGTGAAATGAACAACCT+TGG | 0.558935 | 4.1:-48816963 | None:intergenic |
| CCATTGTTTCCCGATGCCGT+CGG | 0.562058 | 4.1:-48815053 | None:intergenic |
| AATAATAATTAATACCTGGT+GGG | 0.575000 | 4.1:-48815224 | None:intergenic |
| TGAAATGAACAACCTTGGCC+AGG | 0.577946 | 4.1:-48816958 | None:intergenic |
| TTGAGCATTCAACGTATGCA+GGG | 0.579712 | 4.1:-48815138 | None:intergenic |
| GTACCTCAGTTACCTGGCCA+AGG | 0.580976 | 4.1:+48816946 | MS.gene87621:CDS |
| CCGCGAAAATGGATCCCACC+AGG | 0.585634 | 4.1:+48815210 | MS.gene87621:CDS |
| AAGAATCCACTCTATACACC+TGG | 0.593372 | 4.1:+48820082 | MS.gene87621:CDS |
| TTGTATGTGTTCAATAGGAA+TGG | 0.602183 | 4.1:+48815083 | MS.gene87621:CDS |
| GGAGATCCAGGTGTATAGAG+TGG | 0.614102 | 4.1:-48820088 | None:intergenic |
| CAACCTTGGCCAGGTAACTG+AGG | 0.641998 | 4.1:-48816949 | None:intergenic |
| AGTGCCGAGAAAGGAAACCT+TGG | 0.642256 | 4.1:+48816922 | MS.gene87621:intron |
| CAGGTAACTGAGGTACGCCA+AGG | 0.645961 | 4.1:-48816939 | None:intergenic |
| TGAGCATTCAACGTATGCAG+GGG | 0.670288 | 4.1:-48815137 | None:intergenic |
| ACGTTGGACCAATATGTGAG+AGG | 0.683963 | 4.1:+48820749 | MS.gene87621:CDS |
| TGAGCTGTTCAATACAACGT+TGG | 0.703855 | 4.1:+48820733 | MS.gene87621:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTATCTGAAAAAT+CGG | - | chr4.1:48815884-48815903 | None:intergenic | 10.0% |
| !! | AAAGCTTATTATTGATAAAA+AGG | + | chr4.1:48816456-48816475 | MS.gene87621:intron | 15.0% |
| !! | AGAACAAAAAAAATATCATT+CGG | - | chr4.1:48819679-48819698 | None:intergenic | 15.0% |
| !! | AGTAATTCAAATAAGATTTA+CGG | + | chr4.1:48819474-48819493 | MS.gene87621:intron | 15.0% |
| !! | GAAAAATTAAAATAAAAGTG+TGG | - | chr4.1:48817802-48817821 | None:intergenic | 15.0% |
| !! | TAACAGAAACAAAAATATAA+AGG | + | chr4.1:48819410-48819429 | MS.gene87621:intron | 15.0% |
| !! | TATTAATAAATGCTTATTTG+TGG | + | chr4.1:48815761-48815780 | MS.gene87621:intron | 15.0% |
| !! | TCAAAATAATAATTAATACC+TGG | - | chr4.1:48815231-48815250 | None:intergenic | 15.0% |
| !! | TCATTGAAATAATAAATTTC+AGG | - | chr4.1:48817628-48817647 | None:intergenic | 15.0% |
| !!! | AAGAAATAAACTTTTTTCAA+TGG | + | chr4.1:48820689-48820708 | MS.gene87621:intron | 15.0% |
| !!! | AGAACTCTATTTTTAATATA+GGG | + | chr4.1:48818199-48818218 | MS.gene87621:intron | 15.0% |
| !!! | TAGAACTCTATTTTTAATAT+AGG | + | chr4.1:48818198-48818217 | MS.gene87621:intron | 15.0% |
| !!! | TATTTTGTGTAATTATTCAT+AGG | + | chr4.1:48816869-48816888 | MS.gene87621:intron | 15.0% |
| !!! | TTAACAGGTTTATTTTTTTT+TGG | + | chr4.1:48817773-48817792 | MS.gene87621:intron | 15.0% |
| !!! | TTTTTGTTTGTGAAAATAAA+AGG | + | chr4.1:48818174-48818193 | MS.gene87621:intron | 15.0% |
| !! | AAAACGAAAATTCCTATATA+TGG | - | chr4.1:48820214-48820233 | None:intergenic | 20.0% |
| !! | AAATAATAATTAATACCTGG+TGG | - | chr4.1:48815228-48815247 | None:intergenic | 20.0% |
| !! | AATAATAATTAATACCTGGT+GGG | - | chr4.1:48815227-48815246 | None:intergenic | 20.0% |
| !! | AATATGAGAAAAAAATGCAA+AGG | - | chr4.1:48820185-48820204 | None:intergenic | 20.0% |
| !! | AATGAGTTGTTTATTTAAAC+AGG | + | chr4.1:48815941-48815960 | MS.gene87621:intron | 20.0% |
| !! | ACAATACAATTAGTAGTATA+AGG | - | chr4.1:48819955-48819974 | None:intergenic | 20.0% |
| !! | ATATGAGAAAAAAATGCAAA+GGG | - | chr4.1:48820184-48820203 | None:intergenic | 20.0% |
| !! | ATGAGTTGTTTATTTAAACA+GGG | + | chr4.1:48815942-48815961 | MS.gene87621:intron | 20.0% |
| !! | CATATTTATCATCCATATAT+AGG | + | chr4.1:48820199-48820218 | MS.gene87621:intron | 20.0% |
| !! | GAATACTGAAAATTGTATAT+AGG | + | chr4.1:48819333-48819352 | MS.gene87621:intron | 20.0% |
| !! | GATAAATAATAATTTACGCT+TGG | + | chr4.1:48818060-48818079 | MS.gene87621:intron | 20.0% |
| !! | GCATATTATTATTTAGTGAA+AGG | + | chr4.1:48816285-48816304 | MS.gene87621:intron | 20.0% |
| !! | GTATAAAAGTTCCTTAAATT+AGG | - | chr4.1:48819372-48819391 | None:intergenic | 20.0% |
| !! | TAAAAATTATGTTACCTGAT+AGG | - | chr4.1:48820112-48820131 | None:intergenic | 20.0% |
| !! | TCACTAAATAATAATATGCT+TGG | - | chr4.1:48816284-48816303 | None:intergenic | 20.0% |
| !! | TTATATTCTTAGTGTATGTA+TGG | + | chr4.1:48815975-48815994 | MS.gene87621:intron | 20.0% |
| !! | TTATCTGTTAGAAATATGTT+AGG | + | chr4.1:48817175-48817194 | MS.gene87621:intron | 20.0% |
| !!! | ACTAAGAATATAAAAGCATA+AGG | - | chr4.1:48815968-48815987 | None:intergenic | 20.0% |
| !!! | AGAAAAAAAGATTTTTCAAG+GGG | - | chr4.1:48817431-48817450 | None:intergenic | 20.0% |
| !!! | AGAGAAAAAAAGATTTTTCA+AGG | - | chr4.1:48817433-48817452 | None:intergenic | 20.0% |
| !!! | ATATGTTTTATCAACTCATT+CGG | + | chr4.1:48817930-48817949 | MS.gene87621:intron | 20.0% |
| !!! | ATGGATTATTTTTTTTGTCT+TGG | + | chr4.1:48820653-48820672 | MS.gene87621:intron | 20.0% |
| !!! | GAGAAAAAAAGATTTTTCAA+GGG | - | chr4.1:48817432-48817451 | None:intergenic | 20.0% |
| !!! | TAGGATATTTGTTTATTTTG+AGG | + | chr4.1:48816686-48816705 | MS.gene87621:intron | 20.0% |
| !!! | TTTTCTTCTTCAATGTTAAT+GGG | + | chr4.1:48820627-48820646 | MS.gene87621:intron | 20.0% |
| !!! | TTTTTCTTCTTCAATGTTAA+TGG | + | chr4.1:48820626-48820645 | MS.gene87621:intron | 20.0% |
| ! | AAAAAAGGATGAAAAGAAAG+GGG | - | chr4.1:48820289-48820308 | None:intergenic | 25.0% |
| ! | AAAAGACTGAATTGTACTTT+CGG | + | chr4.1:48816182-48816201 | MS.gene87621:intron | 25.0% |
| ! | AAAATTAGCATAGCAAAAGT+AGG | + | chr4.1:48820342-48820361 | MS.gene87621:intron | 25.0% |
| ! | AAATTAGCATAGCAAAAGTA+GGG | + | chr4.1:48820343-48820362 | MS.gene87621:intron | 25.0% |
| ! | AATGAGAAAACTAAAATGAG+TGG | + | chr4.1:48817643-48817662 | MS.gene87621:intron | 25.0% |
| ! | ACAAAAAAGGATGAAAAGAA+AGG | - | chr4.1:48820291-48820310 | None:intergenic | 25.0% |
| ! | ACTCGAATAAACCTAATTTA+AGG | + | chr4.1:48819358-48819377 | MS.gene87621:intron | 25.0% |
| ! | ATATGTTGTATGTGTTCAAT+AGG | + | chr4.1:48815078-48815097 | MS.gene87621:CDS | 25.0% |
| ! | CAAAAAAGGATGAAAAGAAA+GGG | - | chr4.1:48820290-48820309 | None:intergenic | 25.0% |
| ! | CAAATATCCTATTAAATTCC+TGG | - | chr4.1:48816677-48816696 | None:intergenic | 25.0% |
| ! | CAAATTGTAGATGTACTTTA+AGG | - | chr4.1:48820044-48820063 | None:intergenic | 25.0% |
| ! | CACAAAAAGTTAGTTAATGA+TGG | - | chr4.1:48818136-48818155 | None:intergenic | 25.0% |
| ! | CCAATAACAAATAAGAAGAA+GGG | + | chr4.1:48820150-48820169 | MS.gene87621:intron | 25.0% |
| ! | CTGATAAATGATAACTTGAA+AGG | - | chr4.1:48816359-48816378 | None:intergenic | 25.0% |
| ! | GAATCTAATAATGACCTATA+AGG | - | chr4.1:48817067-48817086 | None:intergenic | 25.0% |
| ! | GAGAGAATACATAAATCATT+TGG | + | chr4.1:48817551-48817570 | MS.gene87621:intron | 25.0% |
| ! | GTAAGTGAAAATATTATGAG+TGG | + | chr4.1:48819545-48819564 | MS.gene87621:intron | 25.0% |
| ! | TAATCTACATATTAAACCAC+AGG | - | chr4.1:48816501-48816520 | None:intergenic | 25.0% |
| ! | TACATACAAACTTAGTTTCA+TGG | + | chr4.1:48816996-48817015 | MS.gene87621:CDS | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr4.1:48815461-48815480 | MS.gene87621:intron | 25.0% |
| ! | TCAAATAAGTCAATTCAAAC+AGG | - | chr4.1:48815354-48815373 | None:intergenic | 25.0% |
| ! | TCCAATAACAAATAAGAAGA+AGG | + | chr4.1:48820149-48820168 | MS.gene87621:intron | 25.0% |
| ! | TCTTAAAGTCTTTACAGAAA+TGG | + | chr4.1:48816379-48816398 | MS.gene87621:intron | 25.0% |
| ! | TGAAAAAGCAAAGACAAAAA+AGG | - | chr4.1:48820304-48820323 | None:intergenic | 25.0% |
| ! | TTATAGAAGAAAAACTGAGA+TGG | + | chr4.1:48819445-48819464 | MS.gene87621:intron | 25.0% |
| !! | AAATAAACAACTCATTTTGC+AGG | - | chr4.1:48815937-48815956 | None:intergenic | 25.0% |
| !! | ATTTAAGGAACTTTTATACG+AGG | + | chr4.1:48819373-48819392 | MS.gene87621:intron | 25.0% |
| !! | ATTTTAAACACATGTTTCCT+TGG | + | chr4.1:48817286-48817305 | MS.gene87621:intron | 25.0% |
| !! | CAATTCATGGATTTTATGAT+AGG | + | chr4.1:48816846-48816865 | MS.gene87621:intron | 25.0% |
| !! | TAATTTTTCATTCTTGTGCT+GGG | + | chr4.1:48817813-48817832 | MS.gene87621:intron | 25.0% |
| !! | TATATACTTGTTGAACGAAA+GGG | + | chr4.1:48820428-48820447 | MS.gene87621:intron | 25.0% |
| !! | TTAATTTTTCATTCTTGTGC+TGG | + | chr4.1:48817812-48817831 | MS.gene87621:intron | 25.0% |
| !! | TTATATACTTGTTGAACGAA+AGG | + | chr4.1:48820427-48820446 | MS.gene87621:intron | 25.0% |
| !! | TTCCTTTTCGTTATTCTTAT+GGG | + | chr4.1:48818971-48818990 | MS.gene87621:intron | 25.0% |
| !!! | AACTTTTTTCAATGGTTTGA+TGG | + | chr4.1:48820697-48820716 | MS.gene87621:intron | 25.0% |
| !!! | ATTATCTTTTTGTCACTTGT+GGG | + | chr4.1:48818435-48818454 | MS.gene87621:intron | 25.0% |
| !!! | ATTTGGTTTTCTGATATTTG+AGG | + | chr4.1:48817568-48817587 | MS.gene87621:intron | 25.0% |
| !!! | ATTTTTTTCCTGCATCTAAA+TGG | + | chr4.1:48820254-48820273 | MS.gene87621:intron | 25.0% |
| !!! | CTTATCTTTACATTTTAGCA+AGG | - | chr4.1:48816571-48816590 | None:intergenic | 25.0% |
| !!! | GGAGATTTTTAATTGTTTCT+GGG | + | chr4.1:48820370-48820389 | MS.gene87621:intron | 25.0% |
| !!! | TCATTTCTTCCTTTGTTTTT+GGG | + | chr4.1:48818868-48818887 | MS.gene87621:intron | 25.0% |
| !!! | TGGAGATTTTTAATTGTTTC+TGG | + | chr4.1:48820369-48820388 | MS.gene87621:intron | 25.0% |
| !!! | TTCATTTCTTCCTTTGTTTT+TGG | + | chr4.1:48818867-48818886 | MS.gene87621:intron | 25.0% |
| !!! | TTTTGTTTGGTTTTTGTTGT+TGG | + | chr4.1:48818916-48818935 | MS.gene87621:intron | 25.0% |
| !!! | TTTTTTTCCTGCATCTAAAT+GGG | + | chr4.1:48820255-48820274 | MS.gene87621:intron | 25.0% |
| AAAAAATAAGCCAATCCGAA+CGG | + | chr4.1:48815587-48815606 | MS.gene87621:intron | 30.0% | |
| AAAAACTGATCTCATTTCCA+TGG | - | chr4.1:48818159-48818178 | None:intergenic | 30.0% | |
| AAACAGCTCAAAAATGCTTA+TGG | - | chr4.1:48815615-48815634 | None:intergenic | 30.0% | |
| AACAGCTCAAAAATGCTTAT+GGG | - | chr4.1:48815614-48815633 | None:intergenic | 30.0% | |
| AAGAAACTCTATCATTACTC+TGG | - | chr4.1:48816210-48816229 | None:intergenic | 30.0% | |
| AAGTGATTTGAAGAATGCTT+AGG | + | chr4.1:48815327-48815346 | MS.gene87621:intron | 30.0% | |
| AATCCTATTGTCCACTATTA+GGG | - | chr4.1:48815826-48815845 | None:intergenic | 30.0% | |
| AGAAGTTATGTGAAGTAAAG+AGG | + | chr4.1:48819850-48819869 | MS.gene87621:intron | 30.0% | |
| AGAATAAACTACTCATGTGA+TGG | - | chr4.1:48816765-48816784 | None:intergenic | 30.0% | |
| AGATGGAAGTGAAATAAAAC+TGG | + | chr4.1:48818006-48818025 | MS.gene87621:intron | 30.0% | |
| AGCTGTATTAACCAATGAAT+AGG | - | chr4.1:48817115-48817134 | None:intergenic | 30.0% | |
| AGGTCATTATTAGATTCTTG+TGG | + | chr4.1:48817070-48817089 | MS.gene87621:intron | 30.0% | |
| AGTGAAAATATTATGAGTGG+AGG | + | chr4.1:48819548-48819567 | MS.gene87621:intron | 30.0% | |
| AGTGATAACAAAGAGAATCA+AGG | - | chr4.1:48818717-48818736 | None:intergenic | 30.0% | |
| AGTGATTTGAAGAATGCTTA+GGG | + | chr4.1:48815328-48815347 | MS.gene87621:intron | 30.0% | |
| AGTTAAATATGATGCTGATG+GGG | + | chr4.1:48819509-48819528 | MS.gene87621:intron | 30.0% | |
| ATAGGATTTATAGGTGGTTA+GGG | + | chr4.1:48818477-48818496 | MS.gene87621:intron | 30.0% | |
| CAGCATATAAACTCAAAAGA+CGG | - | chr4.1:48818809-48818828 | None:intergenic | 30.0% | |
| CATCAATGATCAACAATTCA+TGG | + | chr4.1:48816833-48816852 | MS.gene87621:intron | 30.0% | |
| CTACATATGTGTTTCCTTAT+AGG | + | chr4.1:48817050-48817069 | MS.gene87621:intron | 30.0% | |
| CTGAGAAAACTAGAAGAATA+GGG | - | chr4.1:48816729-48816748 | None:intergenic | 30.0% | |
| GAACAAATGTACAACGAAAA+AGG | - | chr4.1:48819030-48819049 | None:intergenic | 30.0% | |
| GAATAAACTACTCATGTGAT+GGG | - | chr4.1:48816764-48816783 | None:intergenic | 30.0% | |
| GAGATCCAACAAAAGAAAAA+AGG | - | chr4.1:48820506-48820525 | None:intergenic | 30.0% | |
| GAGTTAAATATGATGCTGAT+GGG | + | chr4.1:48819508-48819527 | MS.gene87621:intron | 30.0% | |
| GCTTAACTAAAGCTATTGAT+TGG | - | chr4.1:48817335-48817354 | None:intergenic | 30.0% | |
| GGATATTTACTTTAGATCTG+TGG | + | chr4.1:48817878-48817897 | MS.gene87621:intron | 30.0% | |
| GTGAAAATATTATGAGTGGA+GGG | + | chr4.1:48819549-48819568 | MS.gene87621:intron | 30.0% | |
| TAATATGCTTGGTTAGTAGT+TGG | - | chr4.1:48816273-48816292 | None:intergenic | 30.0% | |
| TATAGGATTTATAGGTGGTT+AGG | + | chr4.1:48818476-48818495 | MS.gene87621:intron | 30.0% | |
| TATATTGACATAGAGACGTT+TGG | + | chr4.1:48815381-48815400 | MS.gene87621:intron | 30.0% | |
| TCAATCACCAGGAATTTAAT+AGG | + | chr4.1:48816667-48816686 | MS.gene87621:intron | 30.0% | |
| TCCTAAAAAAACCAAAACCA+CGG | - | chr4.1:48818690-48818709 | None:intergenic | 30.0% | |
| TCTGAGAAAACTAGAAGAAT+AGG | - | chr4.1:48816730-48816749 | None:intergenic | 30.0% | |
| TGAAAATATTATGAGTGGAG+GGG | + | chr4.1:48819550-48819569 | MS.gene87621:intron | 30.0% | |
| TGAGTTAAATATGATGCTGA+TGG | + | chr4.1:48819507-48819526 | MS.gene87621:intron | 30.0% | |
| TTAACCAATGAATAGGCATT+AGG | - | chr4.1:48817108-48817127 | None:intergenic | 30.0% | |
| TTATCTGAAAAATCGGTATC+CGG | - | chr4.1:48815877-48815896 | None:intergenic | 30.0% | |
| TTGTATGTGTTCAATAGGAA+TGG | + | chr4.1:48815083-48815102 | MS.gene87621:CDS | 30.0% | |
| ! | AAGTTTTTCATTCACAGCTA+AGG | - | chr4.1:48817217-48817236 | None:intergenic | 30.0% |
| ! | AATTTTTCATTCTTGTGCTG+GGG | + | chr4.1:48817814-48817833 | MS.gene87621:intron | 30.0% |
| ! | ATATACTTGTTGAACGAAAG+GGG | + | chr4.1:48820429-48820448 | MS.gene87621:intron | 30.0% |
| ! | ATTTAAAACACCAATAGCTC+TGG | + | chr4.1:48817388-48817407 | MS.gene87621:intron | 30.0% |
| ! | ATTTTGTTGGGCTTTTTGAT+GGG | + | chr4.1:48818522-48818541 | MS.gene87621:intron | 30.0% |
| ! | CATTGGTTAATACAGCTATT+TGG | + | chr4.1:48817118-48817137 | MS.gene87621:intron | 30.0% |
| ! | CTTCCTTTTCGTTATTCTTA+TGG | + | chr4.1:48818970-48818989 | MS.gene87621:intron | 30.0% |
| ! | GAACTTCAAAAGTGTGATAA+AGG | + | chr4.1:48820397-48820416 | MS.gene87621:intron | 30.0% |
| ! | GATATTTGAGGTTCAGAAAA+TGG | + | chr4.1:48817580-48817599 | MS.gene87621:intron | 30.0% |
| ! | TAAAGCTATTGATTGGTGAA+GGG | - | chr4.1:48817328-48817347 | None:intergenic | 30.0% |
| ! | TCCTTTTCGTTATTCTTATG+GGG | + | chr4.1:48818972-48818991 | MS.gene87621:intron | 30.0% |
| ! | TCTTTGTTATCACTATGAGT+GGG | + | chr4.1:48818723-48818742 | MS.gene87621:intron | 30.0% |
| ! | TGACTCTGAAGAAAAAATGT+AGG | + | chr4.1:48817520-48817539 | MS.gene87621:intron | 30.0% |
| ! | TTAACTAACTTTTTGTGCCA+TGG | + | chr4.1:48818139-48818158 | MS.gene87621:intron | 30.0% |
| ! | TTTTGCAGTGTTGTAAAGTA+GGG | + | chr4.1:48816005-48816024 | MS.gene87621:intron | 30.0% |
| !! | AGCTATTGGTGTTTTAAATG+TGG | - | chr4.1:48817387-48817406 | None:intergenic | 30.0% |
| !! | CAAGATCATAAGTTGATGTT+TGG | + | chr4.1:48815161-48815180 | MS.gene87621:CDS | 30.0% |
| !! | CCCTTCTTCTTATTTGTTAT+TGG | - | chr4.1:48820153-48820172 | None:intergenic | 30.0% |
| !! | CTTCAATGTTAATGGGTTTA+TGG | + | chr4.1:48820634-48820653 | MS.gene87621:intron | 30.0% |
| !! | GATTATCTTTTTGTCACTTG+TGG | + | chr4.1:48818434-48818453 | MS.gene87621:intron | 30.0% |
| !! | GCTATTGGTGTTTTAAATGT+GGG | - | chr4.1:48817386-48817405 | None:intergenic | 30.0% |
| !! | TACGCTATTTCTATAACACA+AGG | - | chr4.1:48815743-48815762 | None:intergenic | 30.0% |
| !! | TCCTCATGTGATTTTAACAT+GGG | + | chr4.1:48817723-48817742 | MS.gene87621:intron | 30.0% |
| !! | TGGTGTTTTTGTTTATCTGT+TGG | + | chr4.1:48818936-48818955 | MS.gene87621:intron | 30.0% |
| !! | TGTTTTTGTTTATCTGTTGG+TGG | + | chr4.1:48818939-48818958 | MS.gene87621:intron | 30.0% |
| !! | TTATCTTTTTGTCACTTGTG+GGG | + | chr4.1:48818436-48818455 | MS.gene87621:intron | 30.0% |
| !! | TTCCTCATGTGATTTTAACA+TGG | + | chr4.1:48817722-48817741 | MS.gene87621:intron | 30.0% |
| !!! | ATCCCTGGTTTATTTTTGTT+GGG | - | chr4.1:48817852-48817871 | None:intergenic | 30.0% |
| !!! | ATGGTTTGATGGATTTTCAT+AGG | + | chr4.1:48820708-48820727 | MS.gene87621:intron | 30.0% |
| AAAAAGACCCATTTAGATGC+AGG | - | chr4.1:48820265-48820284 | None:intergenic | 35.0% | |
| AAAAATAAGCCAATCCGAAC+GGG | + | chr4.1:48815588-48815607 | MS.gene87621:intron | 35.0% | |
| AAATAAACCAGGGATGAACA+TGG | + | chr4.1:48817857-48817876 | MS.gene87621:intron | 35.0% | |
| AACTGTGAAATGAACAACCT+TGG | - | chr4.1:48816966-48816985 | None:intergenic | 35.0% | |
| AAGCTTGTCAAGGTAGTTTA+TGG | + | chr4.1:48815471-48815490 | MS.gene87621:intron | 35.0% | |
| ACCCATGTTAAAATCACATG+AGG | - | chr4.1:48817727-48817746 | None:intergenic | 35.0% | |
| AGGTGTGGTATAGGATTTAT+AGG | + | chr4.1:48818468-48818487 | MS.gene87621:intron | 35.0% | |
| AGTTACCAAGATAATCTGCA+TGG | - | chr4.1:48819993-48820012 | None:intergenic | 35.0% | |
| ATCCTATTGTCCACTATTAG+GGG | - | chr4.1:48815825-48815844 | None:intergenic | 35.0% | |
| ATGTTGCCTCGTTATTATGA+AGG | - | chr4.1:48816621-48816640 | None:intergenic | 35.0% | |
| ATTTATCCTTCCAGAGCTAT+TGG | - | chr4.1:48817401-48817420 | None:intergenic | 35.0% | |
| CAATCCTATTGTCCACTATT+AGG | - | chr4.1:48815827-48815846 | None:intergenic | 35.0% | |
| CATCTTACCTTTATTCCAGA+AGG | - | chr4.1:48817027-48817046 | None:intergenic | 35.0% | |
| CGTTATTATGAAGGAAGTCA+AGG | - | chr4.1:48816612-48816631 | None:intergenic | 35.0% | |
| CTGCTTCATGTTATTATGCT+GGG | + | chr4.1:48820551-48820570 | MS.gene87621:intron | 35.0% | |
| GATCTGTGGATAAGCATAAA+TGG | + | chr4.1:48817892-48817911 | MS.gene87621:intron | 35.0% | |
| GGAAGTGAAATAAAACTGGA+AGG | + | chr4.1:48818010-48818029 | MS.gene87621:intron | 35.0% | |
| GTAAATAAGCATGTCCATTG+TGG | - | chr4.1:48816542-48816561 | None:intergenic | 35.0% | |
| GTCCCAACAAAAATAAACCA+GGG | + | chr4.1:48817847-48817866 | MS.gene87621:intron | 35.0% | |
| TAAATATCCATGTTCATCCC+TGG | - | chr4.1:48817867-48817886 | None:intergenic | 35.0% | |
| TAGATGGGAGAGTTAAGATT+AGG | + | chr4.1:48818555-48818574 | MS.gene87621:intron | 35.0% | |
| TCTTGGAAGTTCTTATGGAT+AGG | + | chr4.1:48818323-48818342 | MS.gene87621:intron | 35.0% | |
| TGACTTCCTTCATAATAACG+AGG | + | chr4.1:48816612-48816631 | MS.gene87621:intron | 35.0% | |
| TGGAAAACACAAGGTCATTA+CGG | - | chr4.1:48818620-48818639 | None:intergenic | 35.0% | |
| TGTGGATAAGCATAAATGGT+TGG | + | chr4.1:48817896-48817915 | MS.gene87621:intron | 35.0% | |
| TGTGGTATAGGATTTATAGG+TGG | + | chr4.1:48818471-48818490 | MS.gene87621:intron | 35.0% | |
| TGTTCTCTTGGAAGTTCTTA+TGG | + | chr4.1:48818318-48818337 | MS.gene87621:intron | 35.0% | |
| TTTCGGTTAATTCAATCACC+AGG | + | chr4.1:48816656-48816675 | MS.gene87621:intron | 35.0% | |
| TTTGCAGTGTTGTAAAGTAG+GGG | + | chr4.1:48816006-48816025 | MS.gene87621:intron | 35.0% | |
| ! | AAAGCTATTGATTGGTGAAG+GGG | - | chr4.1:48817327-48817346 | None:intergenic | 35.0% |
| ! | AGCTTGCTTTGCCTTTAAAT+GGG | + | chr4.1:48815798-48815817 | MS.gene87621:intron | 35.0% |
| ! | CAAAAGTACATGTGTTCTCT+TGG | + | chr4.1:48818306-48818325 | MS.gene87621:intron | 35.0% |
| ! | CAATTTTCAGTATTCGCCAT+CGG | - | chr4.1:48819328-48819347 | None:intergenic | 35.0% |
| ! | CTAAAGCTATTGATTGGTGA+AGG | - | chr4.1:48817329-48817348 | None:intergenic | 35.0% |
| ! | CTCTTTGTTATCACTATGAG+TGG | + | chr4.1:48818722-48818741 | MS.gene87621:intron | 35.0% |
| ! | GAGAACACATGTACTTTTGA+AGG | - | chr4.1:48818305-48818324 | None:intergenic | 35.0% |
| ! | GAGGCATTACTGTTTAAACT+GGG | + | chr4.1:48819869-48819888 | MS.gene87621:intron | 35.0% |
| ! | GATTTTGTTGGGCTTTTTGA+TGG | + | chr4.1:48818521-48818540 | MS.gene87621:intron | 35.0% |
| ! | GTTTTGCAGTGTTGTAAAGT+AGG | + | chr4.1:48816004-48816023 | MS.gene87621:intron | 35.0% |
| ! | TATACTTGTTGAACGAAAGG+GGG | + | chr4.1:48820430-48820449 | MS.gene87621:intron | 35.0% |
| ! | TTTGTTTATCTGTTGGTGGA+GGG | + | chr4.1:48818943-48818962 | MS.gene87621:intron | 35.0% |
| ! | TTTTGTCTTGGAAGTTCATG+TGG | + | chr4.1:48820665-48820684 | MS.gene87621:intron | 35.0% |
| !! | AGAGGCATTACTGTTTAAAC+TGG | + | chr4.1:48819868-48819887 | MS.gene87621:intron | 35.0% |
| !! | AGCGAGTAGCATTTTGTTAT+CGG | - | chr4.1:48819224-48819243 | None:intergenic | 35.0% |
| !! | AGTAGCATTTTGTTATCGGA+TGG | - | chr4.1:48819220-48819239 | None:intergenic | 35.0% |
| !! | ATAGCTTTAGTTAAGCGATC+AGG | + | chr4.1:48817339-48817358 | MS.gene87621:intron | 35.0% |
| !! | ATTGGTGTTTTAAATGTGGG+AGG | - | chr4.1:48817383-48817402 | None:intergenic | 35.0% |
| !! | CTAATAGTGGACAATAGGAT+TGG | + | chr4.1:48815825-48815844 | MS.gene87621:intron | 35.0% |
| !! | TAGCTTGCTTTGCCTTTAAA+TGG | + | chr4.1:48815797-48815816 | MS.gene87621:intron | 35.0% |
| !! | TCATGTGATTTTAACATGGG+TGG | + | chr4.1:48817726-48817745 | MS.gene87621:intron | 35.0% |
| !! | TGGTAGTTGATAATTGAGTG+AGG | + | chr4.1:48819792-48819811 | MS.gene87621:intron | 35.0% |
| !! | TTAGTTCTTTTGGTCACCTT+TGG | + | chr4.1:48819000-48819019 | MS.gene87621:intron | 35.0% |
| !! | TTTTGTTTATCTGTTGGTGG+AGG | + | chr4.1:48818942-48818961 | MS.gene87621:intron | 35.0% |
| !!! | CATCCCTGGTTTATTTTTGT+TGG | - | chr4.1:48817853-48817872 | None:intergenic | 35.0% |
| !!! | GAGGACCTTTTTTCTTTTGT+TGG | + | chr4.1:48820498-48820517 | MS.gene87621:intron | 35.0% |
| !!! | TCCGTGGTTTTGGTTTTTTT+AGG | + | chr4.1:48818686-48818705 | MS.gene87621:intron | 35.0% |
| !!! | TGGGGCTTTTTTAGTTCTTT+TGG | + | chr4.1:48818990-48819009 | MS.gene87621:intron | 35.0% |
| AAAAGCCCAACAAAATCGCT+CGG | - | chr4.1:48818518-48818537 | None:intergenic | 40.0% | |
| AAGAATCCACTCTATACACC+TGG | + | chr4.1:48820082-48820101 | MS.gene87621:CDS | 40.0% | |
| AAGCAAGCTATGTATGGACT+AGG | - | chr4.1:48815787-48815806 | None:intergenic | 40.0% | |
| AAGCTATCCTAGATAGCTGA+CGG | - | chr4.1:48815671-48815690 | None:intergenic | 40.0% | |
| AAGGCAAAGCAAGCTATGTA+TGG | - | chr4.1:48815793-48815812 | None:intergenic | 40.0% | |
| AATGCTACTCGCTTCTAATG+TGG | + | chr4.1:48819231-48819250 | MS.gene87621:intron | 40.0% | |
| ACATACATTAGCAATGCCTG+TGG | - | chr4.1:48817496-48817515 | None:intergenic | 40.0% | |
| ACTGCCTAATGCCTATTCAT+TGG | + | chr4.1:48817101-48817120 | MS.gene87621:intron | 40.0% | |
| AGTACGTGCTTGATACTAGA+TGG | + | chr4.1:48817989-48818008 | MS.gene87621:intron | 40.0% | |
| AGTTTCATGGAAAGTCCTTC+TGG | + | chr4.1:48817009-48817028 | MS.gene87621:CDS | 40.0% | |
| ATAAGATCCAATTCTCTCCG+TGG | + | chr4.1:48818670-48818689 | MS.gene87621:intron | 40.0% | |
| ATATGTGTGCTATAGCGTAG+CGG | + | chr4.1:48816031-48816050 | MS.gene87621:intron | 40.0% | |
| ATCCTAGAACTGGTGATCTT+CGG | + | chr4.1:48820014-48820033 | MS.gene87621:CDS | 40.0% | |
| ATGATCTCTTTGTCTGGCAT+TGG | + | chr4.1:48819756-48819775 | MS.gene87621:intron | 40.0% | |
| ATGCAATGCCTCTCACATAT+TGG | - | chr4.1:48820760-48820779 | None:intergenic | 40.0% | |
| ATGCCTGCAAAGACTACTTT+CGG | + | chr4.1:48816639-48816658 | MS.gene87621:intron | 40.0% | |
| ATGGGAGAGTTAAGATTAGG+AGG | + | chr4.1:48818558-48818577 | MS.gene87621:intron | 40.0% | |
| ATGTCCATTGTGGCATTTAC+AGG | - | chr4.1:48816532-48816551 | None:intergenic | 40.0% | |
| ATGTGCCTGTGACAATAAAC+AGG | - | chr4.1:48816816-48816835 | None:intergenic | 40.0% | |
| CAACGAAAAAGGAACACCAA+AGG | - | chr4.1:48819019-48819038 | None:intergenic | 40.0% | |
| CAGAAGCTCACAACTACATA+CGG | - | chr4.1:48819710-48819729 | None:intergenic | 40.0% | |
| CGCAAAATTTCGTCTTCAAC+AGG | - | chr4.1:48820479-48820498 | None:intergenic | 40.0% | |
| CTTATTTCCGTCAGCTATCT+AGG | + | chr4.1:48815661-48815680 | MS.gene87621:intron | 40.0% | |
| CTTGTGCTGGGGAATTAATA+TGG | + | chr4.1:48817825-48817844 | MS.gene87621:intron | 40.0% | |
| CTTTGCCTGTTTATTGTCAC+AGG | + | chr4.1:48816808-48816827 | MS.gene87621:intron | 40.0% | |
| CTTTGTGACAAACATGTGTC+TGG | + | chr4.1:48816227-48816246 | MS.gene87621:intron | 40.0% | |
| GATGCTATGATCTCTTTGTC+TGG | + | chr4.1:48819750-48819769 | MS.gene87621:intron | 40.0% | |
| GCAACACTATAGCATTGTAG+TGG | + | chr4.1:48816122-48816141 | MS.gene87621:intron | 40.0% | |
| GCATAGCAAAAGTAGGGAAT+TGG | + | chr4.1:48820349-48820368 | MS.gene87621:intron | 40.0% | |
| GCATTTGACATGCACATCAT+AGG | + | chr4.1:48817693-48817712 | MS.gene87621:intron | 40.0% | |
| GCCCCATAAGAATAACGAAA+AGG | - | chr4.1:48818976-48818995 | None:intergenic | 40.0% | |
| GCTGCTTCATGTTATTATGC+TGG | + | chr4.1:48820550-48820569 | MS.gene87621:intron | 40.0% | |
| GCTTGCTTTGCCTTTAAATG+GGG | + | chr4.1:48815799-48815818 | MS.gene87621:intron | 40.0% | |
| GGAAAACACAAGGTCATTAC+GGG | - | chr4.1:48818619-48818638 | None:intergenic | 40.0% | |
| GGTCCCAACAAAAATAAACC+AGG | + | chr4.1:48817846-48817865 | MS.gene87621:intron | 40.0% | |
| TAACCGAAAGTAGTCTTTGC+AGG | - | chr4.1:48816645-48816664 | None:intergenic | 40.0% | |
| TAAGTCGTTAACCGCGAAAA+TGG | + | chr4.1:48815199-48815218 | MS.gene87621:CDS | 40.0% | |
| TCGCTTCTAATGTGGAACAA+GGG | + | chr4.1:48819239-48819258 | MS.gene87621:intron | 40.0% | |
| TGAAAAGATTCAGAAGCCGA+TGG | + | chr4.1:48819309-48819328 | MS.gene87621:intron | 40.0% | |
| TGACATAGAGACGTTTGGAT+TGG | + | chr4.1:48815386-48815405 | MS.gene87621:intron | 40.0% | |
| TGAGCTGTTCAATACAACGT+TGG | + | chr4.1:48820733-48820752 | MS.gene87621:CDS | 40.0% | |
| TGGGAGAGTTAAGATTAGGA+GGG | + | chr4.1:48818559-48818578 | MS.gene87621:intron | 40.0% | |
| TTATCACTATGAGTGGGTAG+TGG | + | chr4.1:48818729-48818748 | MS.gene87621:intron | 40.0% | |
| TTGAGCATTCAACGTATGCA+GGG | - | chr4.1:48815141-48815160 | None:intergenic | 40.0% | |
| TTGCACGAAGTAACTTATCG+CGG | + | chr4.1:48815300-48815319 | MS.gene87621:intron | 40.0% | |
| TTTCCTGTGTCTTGTCTTTC+TGG | + | chr4.1:48818830-48818849 | MS.gene87621:intron | 40.0% | |
| TTTGCTTGCTTTACAGAGAG+TGG | + | chr4.1:48815108-48815127 | MS.gene87621:CDS | 40.0% | |
| ! | AAGATAATCAACCGACTCAG+TGG | - | chr4.1:48818423-48818442 | None:intergenic | 40.0% |
| ! | AAGCCTATCTAAAGCTGGAA+CGG | + | chr4.1:48819635-48819654 | MS.gene87621:intron | 40.0% |
| ! | ACTCATGTGATGGGAATGTA+AGG | - | chr4.1:48816755-48816774 | None:intergenic | 40.0% |
| ! | CTCATGTGATGGGAATGTAA+GGG | - | chr4.1:48816754-48816773 | None:intergenic | 40.0% |
| ! | GCTAGTTTCGTCAATGACTT+GGG | + | chr4.1:48818277-48818296 | MS.gene87621:intron | 40.0% |
| ! | GTTGAAGACGAAATTTTGCG+AGG | + | chr4.1:48820479-48820498 | MS.gene87621:intron | 40.0% |
| ! | TGACCTTGTGTTTTCCAGTA+CGG | + | chr4.1:48818623-48818642 | MS.gene87621:intron | 40.0% |
| ! | TGAGTAAGCCTATCTAAAGC+TGG | + | chr4.1:48819630-48819649 | MS.gene87621:intron | 40.0% |
| ! | TGCTAGTTTCGTCAATGACT+TGG | + | chr4.1:48818276-48818295 | MS.gene87621:intron | 40.0% |
| ! | TGTGAGTCTGAAGTGGTTAT+AGG | + | chr4.1:48819172-48819191 | MS.gene87621:intron | 40.0% |
| ! | TTGGTAACTCATCCTAGAAC+TGG | + | chr4.1:48820004-48820023 | MS.gene87621:CDS | 40.0% |
| ! | TTTACAGAAATGGACTCTCG+AGG | + | chr4.1:48816389-48816408 | MS.gene87621:intron | 40.0% |
| ! | TTTTGCCGAGCGATTTTGTT+GGG | + | chr4.1:48818510-48818529 | MS.gene87621:intron | 40.0% |
| !! | AAAACACCAATAGCTCTGGA+AGG | + | chr4.1:48817392-48817411 | MS.gene87621:intron | 40.0% |
| !! | AGCTCTGGAAGGATAAATTG+TGG | + | chr4.1:48817403-48817422 | MS.gene87621:intron | 40.0% |
| !! | CAACCAGAGCTAATTTGTTC+AGG | + | chr4.1:48818350-48818369 | MS.gene87621:intron | 40.0% |
| !! | CATTCACAGCTAAGGTATTG+AGG | - | chr4.1:48817209-48817228 | None:intergenic | 40.0% |
| !! | GCATTGGTTTGTTAGCACAA+TGG | + | chr4.1:48819772-48819791 | MS.gene87621:intron | 40.0% |
| !! | GGAAAGTCCTTCTGGAATAA+AGG | + | chr4.1:48817017-48817036 | MS.gene87621:CDS | 40.0% |
| !!! | TTCCTTTGTTTTTGGGCACT+AGG | + | chr4.1:48818875-48818894 | MS.gene87621:intron | 40.0% |
| !!! | TTTGTTTTTGGGCACTAGGA+GGG | + | chr4.1:48818879-48818898 | MS.gene87621:intron | 40.0% |
| AAAAATCGGTATCCGGCACA+AGG | - | chr4.1:48815870-48815889 | None:intergenic | 45.0% | |
| AAAATGCTTATGGGCCCGTT+CGG | - | chr4.1:48815605-48815624 | None:intergenic | 45.0% | |
| AATCCTATACCACACCTCTG+AGG | - | chr4.1:48818465-48818484 | None:intergenic | 45.0% | |
| AATGCCTGTGGATAAACAGG+GGG | - | chr4.1:48817484-48817503 | None:intergenic | 45.0% | |
| ACCAAAACCACGGAGAGAAT+TGG | - | chr4.1:48818680-48818699 | None:intergenic | 45.0% | |
| ACGCCTGAACAAATTAGCTC+TGG | - | chr4.1:48818356-48818375 | None:intergenic | 45.0% | |
| ACGTTGGACCAATATGTGAG+AGG | + | chr4.1:48820749-48820768 | MS.gene87621:CDS | 45.0% | |
| AGATAATCTGCATGGAGTCG+TGG | - | chr4.1:48819985-48820004 | None:intergenic | 45.0% | |
| AGCAATGCCTGTGGATAAAC+AGG | - | chr4.1:48817487-48817506 | None:intergenic | 45.0% | |
| ATACACCTGGATCTCCTATC+AGG | + | chr4.1:48820095-48820114 | MS.gene87621:CDS | 45.0% | |
| ATTATGAGTGGAGGGGATGT+AGG | + | chr4.1:48819557-48819576 | MS.gene87621:intron | 45.0% | |
| CAACGTTTGTGAGTCTGAAG+TGG | + | chr4.1:48819165-48819184 | MS.gene87621:intron | 45.0% | |
| CAATGCCTGTGGATAAACAG+GGG | - | chr4.1:48817485-48817504 | None:intergenic | 45.0% | |
| CACTTCAGACTCACAAACGT+TGG | - | chr4.1:48819167-48819186 | None:intergenic | 45.0% | |
| CGACTCCATGCAGATTATCT+TGG | + | chr4.1:48819985-48820004 | MS.gene87621:intron | 45.0% | |
| CGCTTCTAATGTGGAACAAG+GGG | + | chr4.1:48819240-48819259 | MS.gene87621:intron | 45.0% | |
| CTATTAGGGGCCCCATTTAA+AGG | - | chr4.1:48815812-48815831 | None:intergenic | 45.0% | |
| CTCAGTTTGTGCTCTTTGTG+GGG | + | chr4.1:48818394-48818413 | MS.gene87621:intron | 45.0% | |
| CTCCTAGTGCCCAAAAACAA+AGG | - | chr4.1:48818880-48818899 | None:intergenic | 45.0% | |
| CTCGCTTCTAATGTGGAACA+AGG | + | chr4.1:48819238-48819257 | MS.gene87621:intron | 45.0% | |
| CTGATGGGGAATGATGAGTA+GGG | + | chr4.1:48819523-48819542 | MS.gene87621:intron | 45.0% | |
| GCAATGCCTGTGGATAAACA+GGG | - | chr4.1:48817486-48817505 | None:intergenic | 45.0% | |
| GCTCAGTTTGTGCTCTTTGT+GGG | + | chr4.1:48818393-48818412 | MS.gene87621:intron | 45.0% | |
| GGATTTATAGGTGGTTAGGG+TGG | + | chr4.1:48818480-48818499 | MS.gene87621:intron | 45.0% | |
| GGGAGAGTTAAGATTAGGAG+GGG | + | chr4.1:48818560-48818579 | MS.gene87621:intron | 45.0% | |
| GTTGAGCATTCAACGTATGC+AGG | - | chr4.1:48815142-48815161 | None:intergenic | 45.0% | |
| TACGCCAAGGTTTCCTTTCT+CGG | - | chr4.1:48816929-48816948 | None:intergenic | 45.0% | |
| TAGGTGGTTAGGGTGGTTAT+TGG | + | chr4.1:48818487-48818506 | MS.gene87621:intron | 45.0% | |
| TCCTAGAACTGGTGATCTTC+GGG | + | chr4.1:48820015-48820034 | MS.gene87621:CDS | 45.0% | |
| TGAAATGAACAACCTTGGCC+AGG | - | chr4.1:48816961-48816980 | None:intergenic | 45.0% | |
| TGAGCATTCAACGTATGCAG+GGG | - | chr4.1:48815140-48815159 | None:intergenic | 45.0% | |
| TGAGCCTGTAAATGCCACAA+TGG | + | chr4.1:48816525-48816544 | MS.gene87621:intron | 45.0% | |
| TGTTACCTGATAGGAGATCC+AGG | - | chr4.1:48820103-48820122 | None:intergenic | 45.0% | |
| TTAAATGGGGCCCCTAATAG+TGG | + | chr4.1:48815812-48815831 | MS.gene87621:intron | 45.0% | |
| ! | ATGGGTTACTGGGCTTAGAT+GGG | + | chr4.1:48818540-48818559 | MS.gene87621:intron | 45.0% |
| ! | GTTTTGCCGAGCGATTTTGT+TGG | + | chr4.1:48818509-48818528 | MS.gene87621:intron | 45.0% |
| ! | TCCAATTCTCTCCGTGGTTT+TGG | + | chr4.1:48818676-48818695 | MS.gene87621:intron | 45.0% |
| ! | TCTTGTCTTTCTGGTGGAGT+TGG | + | chr4.1:48818839-48818858 | MS.gene87621:intron | 45.0% |
| !! | AGAGTATTGCCAGTTTGCCA+AGG | - | chr4.1:48819269-48819288 | None:intergenic | 45.0% |
| !!! | AGGAGGGGTTTTTAGTGATC+TGG | + | chr4.1:48818575-48818594 | MS.gene87621:intron | 45.0% |
| !!! | CTTTGTTTTTGGGCACTAGG+AGG | + | chr4.1:48818878-48818897 | MS.gene87621:intron | 45.0% |
| !!! | GGGCTTTTTGATGGGTTACT+GGG | + | chr4.1:48818530-48818549 | MS.gene87621:intron | 45.0% |
| !!! | GGGTTTTTAGTGATCTGGTG+TGG | + | chr4.1:48818580-48818599 | MS.gene87621:intron | 45.0% |
| !!! | TGGGCTTTTTGATGGGTTAC+TGG | + | chr4.1:48818529-48818548 | MS.gene87621:intron | 45.0% |
| AACTATTCGCGACAGACCTG+TGG | + | chr4.1:48816482-48816501 | MS.gene87621:intron | 50.0% | |
| AAGGGGAAACCTTGGCAAAC+TGG | + | chr4.1:48819257-48819276 | MS.gene87621:intron | 50.0% | |
| AAGGGGTGAACGTGCTTAAC+AGG | + | chr4.1:48817758-48817777 | MS.gene87621:intron | 50.0% | |
| ACATGGGTGGCTAGATCCAA+AGG | + | chr4.1:48817739-48817758 | MS.gene87621:intron | 50.0% | |
| AGCAAGTAGCAGTATGTGCG+GGG | + | chr4.1:48818769-48818788 | MS.gene87621:intron | 50.0% | |
| ATGGGTGGCTAGATCCAAAG+GGG | + | chr4.1:48817741-48817760 | MS.gene87621:intron | 50.0% | |
| CATGGGTGGCTAGATCCAAA+GGG | + | chr4.1:48817740-48817759 | MS.gene87621:intron | 50.0% | |
| CCACCAGAAAGACAAGACAC+AGG | - | chr4.1:48818836-48818855 | None:intergenic | 50.0% | |
| CCTGTGTCTTGTCTTTCTGG+TGG | + | chr4.1:48818833-48818852 | MS.gene87621:intron | 50.0% | |
| CTGTGGATAAACAGGGGGAA+GGG | - | chr4.1:48817479-48817498 | None:intergenic | 50.0% | |
| GAGCAAGTAGCAGTATGTGC+GGG | + | chr4.1:48818768-48818787 | MS.gene87621:intron | 50.0% | |
| GCTGATGGGGAATGATGAGT+AGG | + | chr4.1:48819522-48819541 | MS.gene87621:intron | 50.0% | |
| GGAGATCCAGGTGTATAGAG+TGG | - | chr4.1:48820091-48820110 | None:intergenic | 50.0% | |
| GGAGCAAGTAGCAGTATGTG+CGG | + | chr4.1:48818767-48818786 | MS.gene87621:intron | 50.0% | |
| GGATGTAGGAAAGCCTGTGA+GGG | + | chr4.1:48819571-48819590 | MS.gene87621:intron | 50.0% | |
| GGCACTAGATGTGGAGGAAT+TGG | + | chr4.1:48818644-48818663 | MS.gene87621:intron | 50.0% | |
| GGCGTGATAACTGATCTAGC+TGG | + | chr4.1:48818371-48818390 | MS.gene87621:intron | 50.0% | |
| GGCTCAGTTTGTGCTCTTTG+TGG | + | chr4.1:48818392-48818411 | MS.gene87621:intron | 50.0% | |
| GTGAAGGGGAGGAGAATGAA+GGG | - | chr4.1:48817313-48817332 | None:intergenic | 50.0% | |
| GTGCCGTACTGGAAAACACA+AGG | - | chr4.1:48818629-48818648 | None:intergenic | 50.0% | |
| GTTAAGCACGTTCACCCCTT+TGG | - | chr4.1:48817758-48817777 | None:intergenic | 50.0% | |
| TACTTGCTCCAGCAGAGGAT+AGG | - | chr4.1:48818757-48818776 | None:intergenic | 50.0% | |
| TCCCGAAGATCACCAGTTCT+AGG | - | chr4.1:48820019-48820038 | None:intergenic | 50.0% | |
| TGTGGAACAAGGGGAAACCT+TGG | + | chr4.1:48819249-48819268 | MS.gene87621:intron | 50.0% | |
| TGTGGATAAACAGGGGGAAG+GGG | - | chr4.1:48817478-48817497 | None:intergenic | 50.0% | |
| TTCCAGTACGGCACTAGATG+TGG | + | chr4.1:48818635-48818654 | MS.gene87621:intron | 50.0% | |
| ! | AGTGCCGAGAAAGGAAACCT+TGG | + | chr4.1:48816922-48816941 | MS.gene87621:intron | 50.0% |
| ! | CCTATCTAAAGCTGGAACGG+AGG | + | chr4.1:48819638-48819657 | MS.gene87621:intron | 50.0% |
| ! | GCTATTGATTGGTGAAGGGG+AGG | - | chr4.1:48817324-48817343 | None:intergenic | 50.0% |
| ! | GTGGGAGGACTAGCAACTAT+TGG | - | chr4.1:48817368-48817387 | None:intergenic | 50.0% |
| ! | TAGCCTCAGAGGTGTGGTAT+AGG | + | chr4.1:48818459-48818478 | MS.gene87621:intron | 50.0% |
| ! | TCTTTCTGGTGGAGTTGGCT+TGG | + | chr4.1:48818844-48818863 | MS.gene87621:intron | 50.0% |
| ! | TCTTTGTGCAGTGCCGAGAA+AGG | + | chr4.1:48816913-48816932 | MS.gene87621:intron | 50.0% |
| !! | ACAATAGGATTGGTCCCCCT+GGG | + | chr4.1:48815835-48815854 | MS.gene87621:intron | 50.0% |
| !! | CCTCCGTTCCAGCTTTAGAT+AGG | - | chr4.1:48819641-48819660 | None:intergenic | 50.0% |
| !! | GATGGGTTACTGGGCTTAGA+TGG | + | chr4.1:48818539-48818558 | MS.gene87621:intron | 50.0% |
| !! | GGCCCCTAATAGTGGACAAT+AGG | + | chr4.1:48815820-48815839 | MS.gene87621:intron | 50.0% |
| ACAAGGACCGACTAACCCAG+GGG | - | chr4.1:48815853-48815872 | None:intergenic | 55.0% | |
| ACCTTTCCCTTGTCCCTCAC+AGG | - | chr4.1:48819587-48819606 | None:intergenic | 55.0% | |
| AGGAAAGCCTGTGAGGGACA+AGG | + | chr4.1:48819577-48819596 | MS.gene87621:intron | 55.0% | |
| CAACCTTGGCCAGGTAACTG+AGG | - | chr4.1:48816952-48816971 | None:intergenic | 55.0% | |
| CAAGTAGCAGTATGTGCGGG+GGG | + | chr4.1:48818771-48818790 | MS.gene87621:intron | 55.0% | |
| CACAAGGACCGACTAACCCA+GGG | - | chr4.1:48815854-48815873 | None:intergenic | 55.0% | |
| CAGGTAACTGAGGTACGCCA+AGG | - | chr4.1:48816942-48816961 | None:intergenic | 55.0% | |
| CAGTACGGCACTAGATGTGG+AGG | + | chr4.1:48818638-48818657 | MS.gene87621:intron | 55.0% | |
| CCATTGTTTCCCGATGCCGT+CGG | - | chr4.1:48815056-48815075 | None:intergenic | 55.0% | |
| CCTGTGGATAAACAGGGGGA+AGG | - | chr4.1:48817480-48817499 | None:intergenic | 55.0% | |
| CCTTCCCCCTGTTTATCCAC+AGG | + | chr4.1:48817477-48817496 | MS.gene87621:intron | 55.0% | |
| CTCCACATCTAGTGCCGTAC+TGG | - | chr4.1:48818640-48818659 | None:intergenic | 55.0% | |
| CTTGGCGTACCTCAGTTACC+TGG | + | chr4.1:48816940-48816959 | MS.gene87621:CDS | 55.0% | |
| GCAAGTAGCAGTATGTGCGG+GGG | + | chr4.1:48818770-48818789 | MS.gene87621:intron | 55.0% | |
| GGAAAGCCTGTGAGGGACAA+GGG | + | chr4.1:48819578-48819597 | MS.gene87621:intron | 55.0% | |
| GGAGGAGAATGAAGGGTCCA+AGG | - | chr4.1:48817306-48817325 | None:intergenic | 55.0% | |
| GGGATGTAGGAAAGCCTGTG+AGG | + | chr4.1:48819570-48819589 | MS.gene87621:intron | 55.0% | |
| GGTGAAGGGGAGGAGAATGA+AGG | - | chr4.1:48817314-48817333 | None:intergenic | 55.0% | |
| GTACCTCAGTTACCTGGCCA+AGG | + | chr4.1:48816946-48816965 | MS.gene87621:CDS | 55.0% | |
| GTGATCTGGTGTGGACCATC+TGG | + | chr4.1:48818589-48818608 | MS.gene87621:intron | 55.0% | |
| GTGGATAAACAGGGGGAAGG+GGG | - | chr4.1:48817477-48817496 | None:intergenic | 55.0% | |
| TAGTGGAGCCTATCCTCTGC+TGG | + | chr4.1:48818746-48818765 | MS.gene87621:intron | 55.0% | |
| ! | ACTGCTACTTGCTCCAGCAG+AGG | - | chr4.1:48818762-48818781 | None:intergenic | 55.0% |
| ! | CCTGGTGGGATCCATTTTCG+CGG | - | chr4.1:48815213-48815232 | None:intergenic | 55.0% |
| ! | GTCATTACGGGCTGACCAGA+TGG | - | chr4.1:48818607-48818626 | None:intergenic | 55.0% |
| ! | TTGTGGGGTGTCCACTGAGT+CGG | + | chr4.1:48818409-48818428 | MS.gene87621:intron | 55.0% |
| !! | ATTGGTCCCCCTGGGTTAGT+CGG | + | chr4.1:48815843-48815862 | MS.gene87621:intron | 55.0% |
| !! | GACAATAGGATTGGTCCCCC+TGG | + | chr4.1:48815834-48815853 | MS.gene87621:intron | 55.0% |
| !! | GTTTTTGGGCACTAGGAGGG+AGG | + | chr4.1:48818882-48818901 | MS.gene87621:intron | 55.0% |
| !!! | GGCAGGCATGGGGTTTTGTT+TGG | + | chr4.1:48818903-48818922 | MS.gene87621:intron | 55.0% |
| ACTAGGAGGGAGGCAGGCAT+GGG | + | chr4.1:48818892-48818911 | MS.gene87621:intron | 60.0% | |
| CAAGGACCGACTAACCCAGG+GGG | - | chr4.1:48815852-48815871 | None:intergenic | 60.0% | |
| CACTTGTGGGGTAGCCTCAG+AGG | + | chr4.1:48818448-48818467 | MS.gene87621:intron | 60.0% | |
| CCGCGAAAATGGATCCCACC+AGG | + | chr4.1:48815210-48815229 | MS.gene87621:CDS | 60.0% | |
| GCACAAGGACCGACTAACCC+AGG | - | chr4.1:48815855-48815874 | None:intergenic | 60.0% | |
| GCCTGTGAGGGACAAGGGAA+AGG | + | chr4.1:48819583-48819602 | MS.gene87621:intron | 60.0% | |
| GCTTATGGGCCCGTTCGGAT+TGG | - | chr4.1:48815600-48815619 | None:intergenic | 60.0% | |
| TATGTGCGGGGGGCTTGCAT+GGG | + | chr4.1:48818781-48818800 | MS.gene87621:intron | 60.0% | |
| ! | CCGACGGCATCGGGAAACAA+TGG | + | chr4.1:48815053-48815072 | MS.gene87621:CDS | 60.0% |
| !! | GGGTTAGTCGGTCCTTGTGC+CGG | + | chr4.1:48815855-48815874 | MS.gene87621:intron | 60.0% |
| CACTAGGAGGGAGGCAGGCA+TGG | + | chr4.1:48818891-48818910 | MS.gene87621:intron | 65.0% | |
| CTAGGAGGGAGGCAGGCATG+GGG | + | chr4.1:48818893-48818912 | MS.gene87621:intron | 65.0% | |
| GTATGTGCGGGGGGCTTGCA+TGG | + | chr4.1:48818780-48818799 | MS.gene87621:intron | 65.0% | |
| GTGGGGTAGCCTCAGAGGTG+TGG | + | chr4.1:48818453-48818472 | MS.gene87621:intron | 65.0% | |
| TTGGGCACTAGGAGGGAGGC+AGG | + | chr4.1:48818886-48818905 | MS.gene87621:intron | 65.0% | |
| TTTCCCGATGCCGTCGGCGC+AGG | - | chr4.1:48815050-48815069 | None:intergenic | 70.0% | |
| TCCGTCACCGCCTGCGCCGA+CGG | + | chr4.1:48815037-48815056 | MS.gene87621:CDS | 75.0% | |
| ! | ACCGCCTGCGCCGACGGCAT+CGG | + | chr4.1:48815043-48815062 | MS.gene87621:CDS | 75.0% |
| ! | CCCGATGCCGTCGGCGCAGG+CGG | - | chr4.1:48815047-48815066 | None:intergenic | 80.0% |
| ! | GCCGTCGGCGCAGGCGGTGA+CGG | - | chr4.1:48815041-48815060 | None:intergenic | 80.0% |
| !! | CCGCCTGCGCCGACGGCATC+GGG | + | chr4.1:48815044-48815063 | MS.gene87621:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 48815008 | 48820781 | 48815008 | ID=MS.gene87621 |
| chr4.1 | mRNA | 48815008 | 48820781 | 48815008 | ID=MS.gene87621.t1;Parent=MS.gene87621 |
| chr4.1 | exon | 48815008 | 48815231 | 48815008 | ID=MS.gene87621.t1.exon1;Parent=MS.gene87621.t1 |
| chr4.1 | CDS | 48815008 | 48815231 | 48815008 | ID=cds.MS.gene87621.t1;Parent=MS.gene87621.t1 |
| chr4.1 | exon | 48816924 | 48817038 | 48816924 | ID=MS.gene87621.t1.exon2;Parent=MS.gene87621.t1 |
| chr4.1 | CDS | 48816924 | 48817038 | 48816924 | ID=cds.MS.gene87621.t1;Parent=MS.gene87621.t1 |
| chr4.1 | exon | 48819998 | 48820116 | 48819998 | ID=MS.gene87621.t1.exon3;Parent=MS.gene87621.t1 |
| chr4.1 | CDS | 48819998 | 48820116 | 48819998 | ID=cds.MS.gene87621.t1;Parent=MS.gene87621.t1 |
| chr4.1 | exon | 48820730 | 48820781 | 48820730 | ID=MS.gene87621.t1.exon4;Parent=MS.gene87621.t1 |
| chr4.1 | CDS | 48820730 | 48820781 | 48820730 | ID=cds.MS.gene87621.t1;Parent=MS.gene87621.t1 |
| Gene Sequence |
| Protein sequence |
