Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88188.t1 | XP_013455787.1 | 95.2 | 271 | 13 | 0 | 1 | 271 | 1 | 271 | 2.80E-142 | 514.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88188.t1 | Q94KL7 | 56.1 | 271 | 115 | 1 | 2 | 268 | 3 | 273 | 8.9e-81 | 301.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88188.t1 | I3SBG4 | 95.2 | 271 | 13 | 0 | 1 | 271 | 1 | 271 | 2.0e-142 | 514.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene88188 | 0.825053 | 5.78E-54 | -1.69E-46 |
| MS.gene05016 | MS.gene88188 | 0.801727 | 7.86E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene88188 | 0.802548 | 5.33E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene88188 | 0.804243 | 2.37E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene88188 | 0.806926 | 6.49E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene88188 | 0.802094 | 6.60E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene88188 | 0.807244 | 5.56E-50 | -1.69E-46 |
| MS.gene052698 | MS.gene88188 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene88188 | 0.824434 | 8.09E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene88188 | 0.803094 | 4.11E-49 | -1.69E-46 |
| MS.gene053383 | MS.gene88188 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene055359 | MS.gene88188 | 0.828878 | 7.04E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene88188 | 0.808707 | 2.71E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene88188 | 0.821696 | 3.52E-53 | -1.69E-46 |
| MS.gene059006 | MS.gene88188 | 0.821252 | 4.46E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88188.t1 | MTR_4g052350 | 95.203 | 271 | 13 | 0 | 1 | 271 | 1 | 271 | 0.0 | 529 |
| MS.gene88188.t1 | MTR_4g052340 | 81.919 | 271 | 49 | 0 | 1 | 271 | 1 | 271 | 2.29e-169 | 469 |
| MS.gene88188.t1 | MTR_4g052300 | 83.969 | 262 | 42 | 0 | 10 | 271 | 4 | 265 | 2.58e-164 | 456 |
| MS.gene88188.t1 | MTR_4g052320 | 84.411 | 263 | 40 | 1 | 10 | 271 | 4 | 266 | 1.29e-155 | 434 |
| MS.gene88188.t1 | MTR_7g105460 | 59.004 | 261 | 104 | 1 | 13 | 270 | 12 | 272 | 4.59e-101 | 296 |
| MS.gene88188.t1 | MTR_7g071680 | 51.648 | 273 | 109 | 3 | 12 | 262 | 27 | 298 | 1.99e-90 | 270 |
| MS.gene88188.t1 | MTR_7g107670 | 51.737 | 259 | 116 | 3 | 12 | 262 | 31 | 288 | 1.40e-83 | 253 |
| MS.gene88188.t1 | MTR_7g105580 | 50.951 | 263 | 103 | 5 | 12 | 268 | 6 | 248 | 8.14e-79 | 239 |
| MS.gene88188.t1 | MTR_3g020670 | 50.554 | 271 | 124 | 3 | 8 | 268 | 10 | 280 | 1.00e-78 | 239 |
| MS.gene88188.t1 | MTR_7g105590 | 61.957 | 184 | 70 | 0 | 12 | 195 | 6 | 189 | 5.54e-78 | 234 |
| MS.gene88188.t1 | MTR_7g110130 | 49.807 | 259 | 124 | 3 | 12 | 266 | 4 | 260 | 5.73e-78 | 237 |
| MS.gene88188.t1 | MTR_6g023590 | 46.565 | 262 | 134 | 4 | 1 | 257 | 1 | 261 | 1.88e-77 | 236 |
| MS.gene88188.t1 | MTR_7g083870 | 50.570 | 263 | 119 | 5 | 12 | 264 | 33 | 294 | 2.04e-77 | 237 |
| MS.gene88188.t1 | MTR_7g110140 | 49.606 | 254 | 123 | 3 | 13 | 262 | 5 | 257 | 7.67e-76 | 232 |
| MS.gene88188.t1 | MTR_2g090165 | 49.020 | 255 | 125 | 3 | 12 | 262 | 4 | 257 | 1.42e-75 | 231 |
| MS.gene88188.t1 | MTR_6g023950 | 46.947 | 262 | 133 | 4 | 1 | 257 | 1 | 261 | 9.01e-72 | 221 |
| MS.gene88188.t1 | MTR_4g078630 | 46.992 | 266 | 123 | 4 | 10 | 262 | 15 | 275 | 2.78e-71 | 221 |
| MS.gene88188.t1 | MTR_6g023990 | 45.200 | 250 | 132 | 3 | 13 | 257 | 13 | 262 | 1.39e-70 | 218 |
| MS.gene88188.t1 | MTR_7g110160 | 47.843 | 255 | 110 | 3 | 12 | 262 | 4 | 239 | 2.65e-70 | 217 |
| MS.gene88188.t1 | MTR_6g023610 | 46.774 | 248 | 127 | 3 | 13 | 255 | 12 | 259 | 9.33e-70 | 216 |
| MS.gene88188.t1 | MTR_6g023600 | 45.038 | 262 | 138 | 4 | 1 | 257 | 1 | 261 | 1.15e-68 | 213 |
| MS.gene88188.t1 | MTR_7g105570 | 46.923 | 260 | 84 | 2 | 14 | 270 | 21 | 229 | 2.73e-68 | 211 |
| MS.gene88188.t1 | MTR_6g023910 | 45.600 | 250 | 127 | 5 | 13 | 255 | 12 | 259 | 1.84e-67 | 210 |
| MS.gene88188.t1 | MTR_6g035395 | 46.275 | 255 | 119 | 4 | 12 | 262 | 3 | 243 | 7.33e-66 | 206 |
| MS.gene88188.t1 | MTR_6g023600 | 44.275 | 262 | 134 | 5 | 1 | 257 | 1 | 255 | 6.41e-64 | 201 |
| MS.gene88188.t1 | MTR_3g113870 | 45.536 | 224 | 111 | 3 | 3 | 221 | 15 | 232 | 8.03e-58 | 184 |
| MS.gene88188.t1 | MTR_4g084800 | 63.636 | 132 | 48 | 0 | 12 | 143 | 11 | 142 | 2.43e-57 | 181 |
| MS.gene88188.t1 | MTR_3g085740 | 32.549 | 255 | 162 | 6 | 10 | 259 | 71 | 320 | 6.99e-36 | 130 |
| MS.gene88188.t1 | MTR_4g058840 | 31.939 | 263 | 167 | 7 | 14 | 267 | 11 | 270 | 4.72e-27 | 106 |
| MS.gene88188.t1 | MTR_4g058820 | 31.939 | 263 | 167 | 7 | 14 | 267 | 11 | 270 | 4.72e-27 | 106 |
| MS.gene88188.t1 | MTR_1g082760 | 32.296 | 257 | 160 | 5 | 13 | 259 | 39 | 291 | 4.28e-26 | 103 |
| MS.gene88188.t1 | MTR_1g051165 | 30.798 | 263 | 167 | 6 | 11 | 259 | 11 | 272 | 4.98e-26 | 103 |
| MS.gene88188.t1 | MTR_4g058810 | 31.179 | 263 | 169 | 7 | 14 | 267 | 11 | 270 | 7.03e-26 | 103 |
| MS.gene88188.t1 | MTR_3g068155 | 31.600 | 250 | 164 | 6 | 14 | 259 | 19 | 265 | 2.81e-24 | 99.0 |
| MS.gene88188.t1 | MTR_8g442750 | 31.852 | 270 | 156 | 9 | 14 | 265 | 14 | 273 | 6.18e-24 | 98.6 |
| MS.gene88188.t1 | MTR_7g113650 | 29.845 | 258 | 165 | 7 | 13 | 259 | 39 | 291 | 1.59e-23 | 97.1 |
| MS.gene88188.t1 | MTR_4g064887 | 29.811 | 265 | 149 | 9 | 14 | 259 | 15 | 261 | 3.54e-23 | 95.9 |
| MS.gene88188.t1 | MTR_8g096580 | 31.034 | 232 | 138 | 7 | 14 | 235 | 45 | 264 | 1.15e-21 | 92.8 |
| MS.gene88188.t1 | MTR_1196s0010 | 30.364 | 247 | 156 | 7 | 17 | 257 | 277 | 513 | 1.18e-21 | 94.4 |
| MS.gene88188.t1 | MTR_3g068070 | 29.771 | 262 | 161 | 8 | 14 | 264 | 15 | 264 | 1.75e-21 | 91.3 |
| MS.gene88188.t1 | MTR_4g131740 | 30.233 | 258 | 165 | 7 | 13 | 259 | 39 | 292 | 4.12e-21 | 90.5 |
| MS.gene88188.t1 | MTR_3g068175 | 30.268 | 261 | 161 | 10 | 14 | 264 | 17 | 266 | 4.41e-21 | 90.1 |
| MS.gene88188.t1 | MTR_4g064883 | 28.626 | 262 | 164 | 8 | 14 | 264 | 14 | 263 | 6.56e-21 | 89.7 |
| MS.gene88188.t1 | MTR_4g132850 | 28.063 | 253 | 166 | 7 | 12 | 257 | 5 | 248 | 2.56e-20 | 87.8 |
| MS.gene88188.t1 | MTR_7g094510 | 28.030 | 264 | 171 | 6 | 1 | 256 | 1 | 253 | 5.91e-20 | 86.7 |
| MS.gene88188.t1 | MTR_7g063390 | 30.000 | 270 | 174 | 8 | 1 | 259 | 1 | 266 | 6.02e-20 | 87.0 |
| MS.gene88188.t1 | MTR_3g068085 | 30.000 | 260 | 163 | 12 | 14 | 264 | 15 | 264 | 2.92e-19 | 85.1 |
| MS.gene88188.t1 | MTR_3g068065 | 28.626 | 262 | 164 | 8 | 14 | 264 | 17 | 266 | 5.34e-19 | 84.7 |
| MS.gene88188.t1 | MTR_3g068175 | 29.811 | 265 | 161 | 11 | 14 | 264 | 17 | 270 | 5.91e-19 | 84.3 |
| MS.gene88188.t1 | MTR_4g097510 | 30.660 | 212 | 141 | 5 | 15 | 224 | 3 | 210 | 6.10e-19 | 84.3 |
| MS.gene88188.t1 | MTR_7g063330 | 29.249 | 253 | 167 | 7 | 14 | 258 | 15 | 263 | 2.08e-18 | 82.8 |
| MS.gene88188.t1 | MTR_4g086400 | 31.148 | 244 | 142 | 9 | 16 | 244 | 6 | 238 | 4.43e-18 | 84.0 |
| MS.gene88188.t1 | MTR_7g105560 | 66.071 | 56 | 19 | 0 | 12 | 67 | 11 | 66 | 5.91e-18 | 79.0 |
| MS.gene88188.t1 | MTR_4g086410 | 29.508 | 244 | 146 | 7 | 16 | 244 | 6 | 238 | 1.29e-17 | 82.8 |
| MS.gene88188.t1 | MTR_7g063320 | 31.395 | 258 | 158 | 8 | 14 | 259 | 15 | 265 | 5.41e-17 | 79.0 |
| MS.gene88188.t1 | MTR_4g064887 | 30.918 | 207 | 110 | 7 | 14 | 203 | 15 | 205 | 1.92e-16 | 76.6 |
| MS.gene88188.t1 | MTR_7g063360 | 29.259 | 270 | 176 | 8 | 1 | 259 | 1 | 266 | 2.90e-16 | 77.0 |
| MS.gene88188.t1 | MTR_7g063270 | 29.630 | 270 | 172 | 9 | 1 | 258 | 1 | 264 | 4.18e-16 | 76.3 |
| MS.gene88188.t1 | MTR_7g094520 | 26.087 | 253 | 174 | 4 | 14 | 257 | 11 | 259 | 5.06e-16 | 76.3 |
| MS.gene88188.t1 | MTR_8g096620 | 26.667 | 210 | 148 | 4 | 16 | 222 | 47 | 253 | 1.42e-15 | 75.9 |
| MS.gene88188.t1 | MTR_4g064883 | 28.708 | 209 | 127 | 6 | 14 | 209 | 14 | 213 | 6.92e-15 | 72.0 |
| MS.gene88188.t1 | MTR_3g087850 | 31.016 | 187 | 107 | 5 | 18 | 195 | 30 | 203 | 1.38e-14 | 72.4 |
| MS.gene88188.t1 | MTR_7g063260 | 28.044 | 271 | 176 | 9 | 1 | 258 | 1 | 265 | 1.96e-14 | 71.6 |
| MS.gene88188.t1 | MTR_3g087860 | 30.636 | 173 | 99 | 4 | 31 | 195 | 29 | 188 | 7.05e-14 | 70.5 |
| MS.gene88188.t1 | MTR_4g134660 | 30.964 | 197 | 127 | 6 | 17 | 207 | 9 | 202 | 8.37e-13 | 66.6 |
| MS.gene88188.t1 | MTR_4g058830 | 31.138 | 167 | 109 | 4 | 105 | 267 | 52 | 216 | 1.27e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88188.t1 | AT3G51680 | 52.190 | 274 | 110 | 6 | 12 | 266 | 30 | 301 | 1.49e-85 | 258 |
| MS.gene88188.t1 | AT1G52340 | 50.185 | 271 | 120 | 3 | 12 | 268 | 16 | 285 | 7.99e-81 | 245 |
| MS.gene88188.t1 | AT2G47140 | 50.794 | 252 | 119 | 3 | 12 | 259 | 4 | 254 | 1.32e-78 | 238 |
| MS.gene88188.t1 | AT3G26770 | 50.391 | 256 | 117 | 4 | 12 | 258 | 39 | 293 | 9.92e-78 | 238 |
| MS.gene88188.t1 | AT4G03140 | 51.765 | 255 | 114 | 3 | 12 | 258 | 76 | 329 | 3.07e-77 | 238 |
| MS.gene88188.t1 | AT3G26760 | 44.944 | 267 | 135 | 3 | 3 | 258 | 25 | 290 | 8.86e-73 | 225 |
| MS.gene88188.t1 | AT2G47130 | 48.425 | 254 | 119 | 5 | 13 | 259 | 5 | 253 | 1.48e-72 | 223 |
| MS.gene88188.t1 | AT3G29250 | 45.850 | 253 | 128 | 4 | 13 | 259 | 5 | 254 | 4.79e-70 | 217 |
| MS.gene88188.t1 | AT3G29250 | 45.850 | 253 | 128 | 4 | 13 | 259 | 41 | 290 | 1.24e-69 | 217 |
| MS.gene88188.t1 | AT2G47120 | 46.094 | 256 | 129 | 5 | 9 | 259 | 2 | 253 | 2.08e-69 | 215 |
| MS.gene88188.t1 | AT2G47120 | 46.429 | 252 | 126 | 5 | 13 | 259 | 5 | 252 | 9.02e-69 | 213 |
| MS.gene88188.t1 | AT3G29250 | 45.349 | 258 | 131 | 5 | 9 | 259 | 38 | 292 | 1.14e-68 | 214 |
| MS.gene88188.t1 | AT3G29260 | 45.635 | 252 | 131 | 4 | 12 | 259 | 4 | 253 | 8.51e-67 | 208 |
| MS.gene88188.t1 | AT3G42960 | 45.000 | 260 | 126 | 6 | 12 | 258 | 6 | 261 | 1.05e-57 | 186 |
| MS.gene88188.t1 | AT1G24360 | 30.859 | 256 | 163 | 6 | 11 | 259 | 71 | 319 | 2.40e-29 | 113 |
| MS.gene88188.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 15 | 269 | 4.70e-29 | 111 |
| MS.gene88188.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 22 | 276 | 5.36e-29 | 111 |
| MS.gene88188.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 17 | 271 | 5.55e-29 | 111 |
| MS.gene88188.t1 | AT1G63380 | 32.031 | 256 | 163 | 6 | 14 | 259 | 19 | 273 | 6.03e-29 | 111 |
| MS.gene88188.t1 | AT3G55290 | 31.765 | 255 | 164 | 6 | 14 | 259 | 18 | 271 | 4.00e-28 | 109 |
| MS.gene88188.t1 | AT1G62610 | 31.250 | 256 | 165 | 6 | 14 | 259 | 13 | 267 | 4.31e-28 | 108 |
| MS.gene88188.t1 | AT3G55290 | 31.765 | 255 | 164 | 6 | 14 | 259 | 17 | 270 | 4.53e-28 | 108 |
| MS.gene88188.t1 | AT1G62610 | 31.250 | 256 | 165 | 6 | 14 | 259 | 14 | 268 | 4.63e-28 | 108 |
| MS.gene88188.t1 | AT1G62610 | 31.250 | 256 | 165 | 6 | 14 | 259 | 15 | 269 | 4.73e-28 | 108 |
| MS.gene88188.t1 | AT1G62610 | 31.250 | 256 | 165 | 6 | 14 | 259 | 19 | 273 | 4.86e-28 | 108 |
| MS.gene88188.t1 | AT2G30670 | 31.154 | 260 | 172 | 4 | 14 | 270 | 7 | 262 | 1.58e-27 | 107 |
| MS.gene88188.t1 | AT3G55310 | 32.157 | 255 | 163 | 6 | 14 | 259 | 17 | 270 | 9.55e-27 | 105 |
| MS.gene88188.t1 | AT2G29330 | 30.859 | 256 | 166 | 6 | 14 | 264 | 7 | 256 | 9.39e-26 | 102 |
| MS.gene88188.t1 | AT2G29310 | 31.679 | 262 | 168 | 7 | 14 | 270 | 7 | 262 | 1.39e-25 | 102 |
| MS.gene88188.t1 | AT2G47150 | 31.641 | 256 | 116 | 8 | 14 | 268 | 1 | 198 | 1.46e-25 | 100 |
| MS.gene88188.t1 | AT2G29340 | 31.179 | 263 | 156 | 7 | 14 | 264 | 7 | 256 | 2.02e-25 | 101 |
| MS.gene88188.t1 | AT2G29340 | 31.179 | 263 | 156 | 7 | 14 | 264 | 7 | 256 | 3.61e-25 | 102 |
| MS.gene88188.t1 | AT2G17845 | 29.885 | 261 | 164 | 7 | 14 | 259 | 47 | 303 | 3.76e-25 | 102 |
| MS.gene88188.t1 | AT3G46170 | 30.769 | 260 | 162 | 7 | 13 | 259 | 25 | 279 | 5.58e-25 | 101 |
| MS.gene88188.t1 | AT3G05260 | 29.961 | 257 | 165 | 6 | 13 | 259 | 36 | 287 | 1.56e-23 | 97.1 |
| MS.gene88188.t1 | AT1G07440 | 29.151 | 271 | 160 | 8 | 14 | 269 | 12 | 265 | 1.70e-23 | 96.7 |
| MS.gene88188.t1 | AT1G54870 | 29.670 | 273 | 174 | 7 | 1 | 259 | 65 | 333 | 3.05e-23 | 97.4 |
| MS.gene88188.t1 | AT1G54870 | 29.670 | 273 | 174 | 7 | 1 | 259 | 67 | 335 | 3.10e-23 | 97.4 |
| MS.gene88188.t1 | AT1G07450 | 29.804 | 255 | 169 | 7 | 14 | 264 | 8 | 256 | 3.29e-23 | 95.9 |
| MS.gene88188.t1 | AT2G29300 | 31.076 | 251 | 165 | 6 | 14 | 259 | 7 | 254 | 1.15e-22 | 94.4 |
| MS.gene88188.t1 | AT5G06060 | 29.688 | 256 | 169 | 7 | 14 | 264 | 9 | 258 | 3.81e-22 | 92.8 |
| MS.gene88188.t1 | AT2G29300 | 30.800 | 250 | 165 | 6 | 14 | 258 | 7 | 253 | 5.42e-22 | 92.8 |
| MS.gene88188.t1 | AT2G29320 | 30.534 | 262 | 166 | 8 | 11 | 264 | 10 | 263 | 3.29e-21 | 90.5 |
| MS.gene88188.t1 | AT2G29260 | 27.737 | 274 | 175 | 8 | 2 | 264 | 56 | 317 | 3.99e-21 | 91.3 |
| MS.gene88188.t1 | AT3G12800 | 31.660 | 259 | 160 | 7 | 14 | 259 | 10 | 264 | 5.06e-21 | 90.5 |
| MS.gene88188.t1 | AT4G05530 | 32.016 | 253 | 156 | 8 | 12 | 257 | 7 | 250 | 6.17e-21 | 89.4 |
| MS.gene88188.t1 | AT2G29370 | 28.958 | 259 | 167 | 7 | 14 | 264 | 16 | 265 | 6.53e-21 | 89.7 |
| MS.gene88188.t1 | AT2G29290 | 28.346 | 254 | 175 | 4 | 14 | 264 | 7 | 256 | 3.38e-20 | 87.8 |
| MS.gene88188.t1 | AT2G29340 | 31.795 | 195 | 128 | 3 | 14 | 205 | 7 | 199 | 4.71e-20 | 85.9 |
| MS.gene88188.t1 | AT2G29340 | 31.795 | 195 | 128 | 3 | 14 | 205 | 7 | 199 | 4.71e-20 | 85.9 |
| MS.gene88188.t1 | AT5G50600 | 28.509 | 228 | 150 | 6 | 14 | 235 | 45 | 265 | 1.03e-19 | 87.8 |
| MS.gene88188.t1 | AT5G50700 | 28.509 | 228 | 150 | 6 | 14 | 235 | 45 | 265 | 1.03e-19 | 87.8 |
| MS.gene88188.t1 | AT2G29150 | 30.078 | 256 | 167 | 8 | 14 | 264 | 16 | 264 | 1.04e-19 | 86.3 |
| MS.gene88188.t1 | AT2G29350 | 29.412 | 255 | 170 | 6 | 14 | 264 | 15 | 263 | 2.47e-19 | 85.5 |
| MS.gene88188.t1 | AT2G29310 | 32.308 | 195 | 127 | 3 | 14 | 205 | 7 | 199 | 4.02e-19 | 83.6 |
| MS.gene88188.t1 | AT5G18210 | 28.090 | 267 | 168 | 10 | 7 | 257 | 1 | 259 | 5.00e-19 | 84.3 |
| MS.gene88188.t1 | AT5G50770 | 31.839 | 223 | 143 | 8 | 16 | 233 | 47 | 265 | 8.61e-19 | 85.1 |
| MS.gene88188.t1 | AT5G10050 | 30.055 | 183 | 120 | 4 | 15 | 195 | 6 | 182 | 2.47e-18 | 82.8 |
| MS.gene88188.t1 | AT1G49670 | 32.178 | 202 | 123 | 4 | 16 | 204 | 6 | 206 | 2.97e-18 | 84.7 |
| MS.gene88188.t1 | AT2G29360 | 29.020 | 255 | 172 | 7 | 14 | 264 | 16 | 265 | 3.30e-18 | 82.4 |
| MS.gene88188.t1 | AT1G49670 | 32.178 | 202 | 123 | 4 | 16 | 204 | 6 | 206 | 3.40e-18 | 84.3 |
| MS.gene88188.t1 | AT4G13180 | 29.779 | 272 | 169 | 9 | 1 | 259 | 1 | 263 | 7.56e-18 | 81.3 |
| MS.gene88188.t1 | AT2G29310 | 29.694 | 229 | 152 | 6 | 36 | 259 | 27 | 251 | 7.68e-18 | 81.3 |
| MS.gene88188.t1 | AT5G50690 | 30.899 | 178 | 114 | 4 | 13 | 185 | 44 | 217 | 9.85e-18 | 80.9 |
| MS.gene88188.t1 | AT5G50590 | 30.899 | 178 | 114 | 4 | 13 | 185 | 44 | 217 | 9.85e-18 | 80.9 |
| MS.gene88188.t1 | AT5G50690 | 30.899 | 178 | 114 | 4 | 13 | 185 | 44 | 217 | 1.92e-17 | 80.9 |
| MS.gene88188.t1 | AT5G50590 | 30.899 | 178 | 114 | 4 | 13 | 185 | 44 | 217 | 1.92e-17 | 80.9 |
| MS.gene88188.t1 | AT5G65205 | 31.148 | 183 | 118 | 4 | 15 | 195 | 7 | 183 | 3.32e-17 | 79.7 |
| MS.gene88188.t1 | AT5G18210 | 27.899 | 276 | 170 | 11 | 7 | 266 | 1 | 263 | 4.51e-17 | 79.3 |
| MS.gene88188.t1 | AT3G47350 | 28.856 | 201 | 127 | 6 | 16 | 208 | 46 | 238 | 9.56e-17 | 79.0 |
| MS.gene88188.t1 | AT3G47350 | 28.856 | 201 | 127 | 6 | 16 | 208 | 46 | 238 | 1.23e-16 | 78.6 |
| MS.gene88188.t1 | AT1G10310 | 29.612 | 206 | 142 | 3 | 3 | 207 | 4 | 207 | 5.53e-16 | 75.9 |
| MS.gene88188.t1 | AT2G29320 | 30.846 | 201 | 129 | 5 | 11 | 205 | 10 | 206 | 9.59e-15 | 71.6 |
| MS.gene88188.t1 | AT3G04000 | 27.574 | 272 | 178 | 7 | 1 | 256 | 1 | 269 | 9.75e-15 | 72.8 |
| MS.gene88188.t1 | AT2G29290 | 27.551 | 196 | 137 | 3 | 70 | 264 | 48 | 239 | 1.63e-14 | 71.6 |
| MS.gene88188.t1 | AT2G29350 | 29.442 | 197 | 131 | 5 | 70 | 264 | 35 | 225 | 2.92e-14 | 70.9 |
| MS.gene88188.t1 | AT2G29350 | 29.744 | 195 | 132 | 3 | 14 | 205 | 15 | 207 | 4.76e-14 | 70.1 |
| MS.gene88188.t1 | AT2G29320 | 30.846 | 201 | 125 | 7 | 70 | 264 | 53 | 245 | 8.28e-14 | 69.7 |
| MS.gene88188.t1 | AT3G03980 | 26.394 | 269 | 158 | 9 | 14 | 256 | 14 | 268 | 1.89e-13 | 68.9 |
| MS.gene88188.t1 | AT5G04900 | 30.890 | 191 | 124 | 3 | 20 | 202 | 83 | 273 | 3.04e-12 | 66.2 |
| MS.gene88188.t1 | AT4G20760 | 28.571 | 224 | 137 | 8 | 14 | 215 | 41 | 263 | 3.48e-11 | 62.8 |
| MS.gene88188.t1 | AT2G29310 | 29.480 | 173 | 117 | 3 | 36 | 205 | 27 | 197 | 3.64e-11 | 61.6 |
| MS.gene88188.t1 | AT4G20760 | 28.571 | 224 | 137 | 8 | 14 | 215 | 61 | 283 | 4.45e-11 | 62.8 |
Find 68 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAACTTGTTTACCTTCTT+AGG | 0.212297 | 4.4:-50227071 | None:intergenic |
| GCAGCTTCAGCCACATCTTT+TGG | 0.258023 | 4.4:-50228287 | None:intergenic |
| GTCAATCACTTCTTGAAATT+CGG | 0.305956 | 4.4:-50227949 | None:intergenic |
| GGCTGAAGCTGCTTTGTACT+TGG | 0.373690 | 4.4:+50228298 | MS.gene88188:CDS |
| GATGTCTAGTTTACCGTACT+TGG | 0.377024 | 4.4:-50227865 | None:intergenic |
| TTTAACAACGCAGGCATAAC+CGG | 0.377917 | 4.4:+50227891 | MS.gene88188:CDS |
| GGGCTCACGGTCGAAAATAA+TGG | 0.383566 | 4.4:+50228371 | MS.gene88188:CDS |
| AACTTGGCTGGTGTATTTCT+CGG | 0.386916 | 4.4:+50227975 | MS.gene88188:CDS |
| ACCCATGGCAAGCGTTCCTT+TGG | 0.387041 | 4.4:+50227038 | None:intergenic |
| CTTGGAAACGGTTGTGTTCA+CGG | 0.391770 | 4.4:-50227847 | None:intergenic |
| GATGTTTATTCTAATCTAAA+GGG | 0.402427 | 4.4:+50228251 | MS.gene88188:CDS |
| AATTGATTTGCAAGGCTTGA+AGG | 0.412288 | 4.4:+50227630 | MS.gene88188:intron |
| AGATGTTTATTCTAATCTAA+AGG | 0.417812 | 4.4:+50228250 | MS.gene88188:CDS |
| ATTAACACAGCTAGTGTTTG+TGG | 0.418206 | 4.4:+50228047 | MS.gene88188:CDS |
| TTCTTTAAGCTTGATGATGA+TGG | 0.418334 | 4.4:+50228221 | MS.gene88188:CDS |
| GTATGTTAGTGGTCTTAATC+TGG | 0.422808 | 4.4:+50228337 | MS.gene88188:CDS |
| GGTCTTAATCTGGTCATAGA+TGG | 0.434549 | 4.4:+50228347 | MS.gene88188:CDS |
| GATGAGTCTAAGTATGTTAG+TGG | 0.435502 | 4.4:+50228326 | MS.gene88188:CDS |
| GCAACTTGTTTACCTTCTTA+GGG | 0.438236 | 4.4:-50227070 | None:intergenic |
| TGTGTGTCACCTTATGTTGT+TGG | 0.443444 | 4.4:+50228179 | MS.gene88188:CDS |
| AGTTCAAAGCACGCCGTTGT+TGG | 0.452888 | 4.4:+50228104 | MS.gene88188:CDS |
| AACACAACCGTTTCCAAGTA+CGG | 0.463216 | 4.4:+50227852 | MS.gene88188:CDS |
| GTTCAAAGCACGCCGTTGTT+GGG | 0.466302 | 4.4:+50228105 | MS.gene88188:CDS |
| CAGAACATTTGTGTAACTCT+TGG | 0.468191 | 4.4:-50227776 | None:intergenic |
| TGGTTTCTGCTGCCCTAAGA+AGG | 0.468552 | 4.4:+50227058 | MS.gene88188:CDS |
| TCGGAACAAAGCACGCTGCT+AGG | 0.478517 | 4.4:+50227994 | MS.gene88188:CDS |
| ATTATGCTACCTCGTCGAGC+AGG | 0.486242 | 4.4:-50228026 | None:intergenic |
| GCTGAAGCTGCTTTGTACTT+GGG | 0.489213 | 4.4:+50228299 | MS.gene88188:CDS |
| ACAGGTGGTGCGAGCGGCAT+CGG | 0.490938 | 4.4:+50227669 | MS.gene88188:CDS |
| AACGGAGTTCCAACAACATA+AGG | 0.500717 | 4.4:-50228188 | None:intergenic |
| TAGTTTACCGTACTTGGAAA+CGG | 0.502375 | 4.4:-50227859 | None:intergenic |
| CGGAACAAAGCACGCTGCTA+GGG | 0.506556 | 4.4:+50227995 | MS.gene88188:CDS |
| AGAAGTGATTGACATTAACT+TGG | 0.510820 | 4.4:+50227959 | MS.gene88188:CDS |
| AACCAAAGGAACGCTTGCCA+TGG | 0.523073 | 4.4:-50227040 | None:intergenic |
| TTATGTTGTTGGAACTCCGT+TGG | 0.530258 | 4.4:+50228190 | MS.gene88188:CDS |
| ATTGATTTGCAAGGCTTGAA+GGG | 0.533992 | 4.4:+50227631 | MS.gene88188:intron |
| ATTTGCAAGGCTTGAAGGGA+AGG | 0.535334 | 4.4:+50227635 | MS.gene88188:intron |
| GGGAAGGTAGCTCTGATCAC+AGG | 0.540590 | 4.4:+50227651 | MS.gene88188:CDS |
| TTAAAGAAATTCTTAGCCAA+CGG | 0.547896 | 4.4:-50228206 | None:intergenic |
| AACGACTTGAGCTCCGTGGT+TGG | 0.548195 | 4.4:-50227715 | None:intergenic |
| TGTTACGTCACAATGGACAT+AGG | 0.554351 | 4.4:-50227802 | None:intergenic |
| GTGATTGACATTAACTTGGC+TGG | 0.556342 | 4.4:+50227963 | MS.gene88188:CDS |
| AGCTGATATTCAAGATGACA+TGG | 0.557757 | 4.4:+50227740 | MS.gene88188:CDS |
| ACCGTATGGTCCAAGCTCGA+TGG | 0.561776 | 4.4:-50228144 | None:intergenic |
| CTTAATCTGGTCATAGATGG+AGG | 0.567336 | 4.4:+50228350 | MS.gene88188:CDS |
| GCCATCGAGCTTGGACCATA+CGG | 0.570172 | 4.4:+50228143 | MS.gene88188:CDS |
| ACCAAAGGAACGCTTGCCAT+GGG | 0.575522 | 4.4:-50227039 | None:intergenic |
| GCAAGACTCTTCTCCAACCA+CGG | 0.582010 | 4.4:+50227702 | MS.gene88188:CDS |
| CTGATCACAGGTGGTGCGAG+CGG | 0.585318 | 4.4:+50227663 | MS.gene88188:CDS |
| TTATGCTACCTCGTCGAGCA+GGG | 0.592133 | 4.4:-50228025 | None:intergenic |
| AGTGTTTGTGGATGCATAGG+TGG | 0.595612 | 4.4:+50228059 | MS.gene88188:CDS |
| GGTCATAGATGGAGGGCTCA+CGG | 0.600112 | 4.4:+50228358 | MS.gene88188:CDS |
| GACATCATGTTTAACAACGC+AGG | 0.601580 | 4.4:+50227882 | MS.gene88188:CDS |
| TTGTGGATGCATAGGTGGTG+TGG | 0.603697 | 4.4:+50228064 | MS.gene88188:CDS |
| TGGTGCGAGCGGCATCGGCG+AGG | 0.613425 | 4.4:+50227674 | MS.gene88188:CDS |
| TGTCCATTGTGACGTAACAA+AGG | 0.614231 | 4.4:+50227806 | MS.gene88188:CDS |
| GCTAGTGTTTGTGGATGCAT+AGG | 0.616627 | 4.4:+50228056 | MS.gene88188:CDS |
| TAATCTTATGCCAAAAGATG+TGG | 0.618201 | 4.4:+50228277 | MS.gene88188:CDS |
| GGCGTGCTTTGAACTTGTGT+AGG | 0.622128 | 4.4:-50228096 | None:intergenic |
| CAATTCACTCGAATACCGTA+TGG | 0.626112 | 4.4:-50228158 | None:intergenic |
| TTAATCTGGTCATAGATGGA+GGG | 0.631593 | 4.4:+50228351 | MS.gene88188:CDS |
| TTTCCTTTGTTACGTCACAA+TGG | 0.636188 | 4.4:-50227809 | None:intergenic |
| GTTGGAGAAGAGTCTTGCAG+TGG | 0.664924 | 4.4:-50227697 | None:intergenic |
| CTTAGGGCAGCAGAAACCAA+AGG | 0.669735 | 4.4:-50227054 | None:intergenic |
| AAGGTAGCTCTGATCACAGG+TGG | 0.672097 | 4.4:+50227654 | MS.gene88188:CDS |
| CTATAACGACTTGAGCTCCG+TGG | 0.687548 | 4.4:-50227719 | None:intergenic |
| GCTGATATTCAAGATGACAT+GGG | 0.689593 | 4.4:+50227741 | MS.gene88188:CDS |
| GTAATGATCCCTGCTCGACG+AGG | 0.699215 | 4.4:+50228017 | MS.gene88188:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATCATATTTGAAAT+AGG | - | chr4.4:50227496-50227515 | None:intergenic | 10.0% |
| !!! | GAATTATTCTAATTTTTTTT+TGG | + | chr4.4:50227249-50227268 | MS.gene88188:intron | 10.0% |
| !! | AAACAAAAGAAAAAAAAGTA+CGG | + | chr4.4:50227558-50227577 | MS.gene88188:intron | 15.0% |
| !!! | AATTTAACTTTGATATAGTT+TGG | + | chr4.4:50227134-50227153 | MS.gene88188:intron | 15.0% |
| !!! | ATTTAACTTTGATATAGTTT+GGG | + | chr4.4:50227135-50227154 | MS.gene88188:intron | 15.0% |
| !!! | TATATTTTTATGTATGATTG+TGG | - | chr4.4:50227321-50227340 | None:intergenic | 15.0% |
| !!! | TTTTATCTAATTTTTAAGCT+AGG | - | chr4.4:50227168-50227187 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTGTTTTTTTG+AGG | - | chr4.4:50227553-50227572 | None:intergenic | 15.0% |
| !! | ACAATTAATTTCAGTTACAA+AGG | - | chr4.4:50227587-50227606 | None:intergenic | 20.0% |
| !! | AGATGTTTATTCTAATCTAA+AGG | + | chr4.4:50228250-50228269 | MS.gene88188:CDS | 20.0% |
| !! | GATGTTTATTCTAATCTAAA+GGG | + | chr4.4:50228251-50228270 | MS.gene88188:CDS | 20.0% |
| !! | TTGAATTAAATTTGTGTACA+TGG | + | chr4.4:50227190-50227209 | MS.gene88188:intron | 20.0% |
| !!! | AAACAACTTCTATTTTTCTT+AGG | - | chr4.4:50227427-50227446 | None:intergenic | 20.0% |
| !!! | TGTTCAAAAGTTTTTATCTT+TGG | - | chr4.4:50227519-50227538 | None:intergenic | 20.0% |
| ! | TTAAAGAAATTCTTAGCCAA+CGG | - | chr4.4:50228209-50228228 | None:intergenic | 25.0% |
| !! | ATTTTTATGTATGATTGTGG+AGG | - | chr4.4:50227318-50227337 | None:intergenic | 25.0% |
| !!! | ATATTACTCTGAAGTTTGTT+TGG | - | chr4.4:50227225-50227244 | None:intergenic | 25.0% |
| !!! | TAACTTGTTTTCAAGTATGT+TGG | - | chr4.4:50227928-50227947 | None:intergenic | 25.0% |
| AACTTTGATATAGTTTGGGT+TGG | + | chr4.4:50227139-50227158 | MS.gene88188:intron | 30.0% | |
| AGAAGTGATTGACATTAACT+TGG | + | chr4.4:50227959-50227978 | MS.gene88188:CDS | 30.0% | |
| GTCAATCACTTCTTGAAATT+CGG | - | chr4.4:50227952-50227971 | None:intergenic | 30.0% | |
| TAATCTTATGCCAAAAGATG+TGG | + | chr4.4:50228277-50228296 | MS.gene88188:CDS | 30.0% | |
| ! | AGTAAAATGAGTCTAAGATG+TGG | - | chr4.4:50227349-50227368 | None:intergenic | 30.0% |
| !! | TTCTTTAAGCTTGATGATGA+TGG | + | chr4.4:50228221-50228240 | MS.gene88188:CDS | 30.0% |
| AGCTGATATTCAAGATGACA+TGG | + | chr4.4:50227740-50227759 | MS.gene88188:CDS | 35.0% | |
| ATTAACACAGCTAGTGTTTG+TGG | + | chr4.4:50228047-50228066 | MS.gene88188:CDS | 35.0% | |
| CAGAACATTTGTGTAACTCT+TGG | - | chr4.4:50227779-50227798 | None:intergenic | 35.0% | |
| GATGAGTCTAAGTATGTTAG+TGG | + | chr4.4:50228326-50228345 | MS.gene88188:CDS | 35.0% | |
| GCTGATATTCAAGATGACAT+GGG | + | chr4.4:50227741-50227760 | MS.gene88188:CDS | 35.0% | |
| GCTGCATCATCATACATAAA+AGG | - | chr4.4:50227105-50227124 | None:intergenic | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | - | chr4.4:50227862-50227881 | None:intergenic | 35.0% | |
| TGTTGGGCTAATGAAAAACA+CGG | + | chr4.4:50228121-50228140 | MS.gene88188:CDS | 35.0% | |
| TTAATCTGGTCATAGATGGA+GGG | + | chr4.4:50228351-50228370 | MS.gene88188:CDS | 35.0% | |
| TTTCCTTTGTTACGTCACAA+TGG | - | chr4.4:50227812-50227831 | None:intergenic | 35.0% | |
| ! | GCAACTTGTTTACCTTCTTA+GGG | - | chr4.4:50227073-50227092 | None:intergenic | 35.0% |
| ! | GTATGTTAGTGGTCTTAATC+TGG | + | chr4.4:50228337-50228356 | MS.gene88188:CDS | 35.0% |
| ! | GTTTTTCATTAGCCCAACAA+CGG | - | chr4.4:50228120-50228139 | None:intergenic | 35.0% |
| ! | TGCAACTTGTTTACCTTCTT+AGG | - | chr4.4:50227074-50227093 | None:intergenic | 35.0% |
| !! | AATTGATTTGCAAGGCTTGA+AGG | + | chr4.4:50227630-50227649 | MS.gene88188:intron | 35.0% |
| !! | ATTGATTTGCAAGGCTTGAA+GGG | + | chr4.4:50227631-50227650 | MS.gene88188:intron | 35.0% |
| !! | TCATGCTCAATTGATTTGCA+AGG | + | chr4.4:50227622-50227641 | MS.gene88188:intron | 35.0% |
| !!! | TATGTTGGTTTTGTTTACGC+CGG | - | chr4.4:50227913-50227932 | None:intergenic | 35.0% |
| AACACAACCGTTTCCAAGTA+CGG | + | chr4.4:50227852-50227871 | MS.gene88188:CDS | 40.0% | |
| AACGGAGTTCCAACAACATA+AGG | - | chr4.4:50228191-50228210 | None:intergenic | 40.0% | |
| AACTTGGCTGGTGTATTTCT+CGG | + | chr4.4:50227975-50227994 | MS.gene88188:CDS | 40.0% | |
| CAATTCACTCGAATACCGTA+TGG | - | chr4.4:50228161-50228180 | None:intergenic | 40.0% | |
| CTTAATCTGGTCATAGATGG+AGG | + | chr4.4:50228350-50228369 | MS.gene88188:CDS | 40.0% | |
| GACATCATGTTTAACAACGC+AGG | + | chr4.4:50227882-50227901 | MS.gene88188:CDS | 40.0% | |
| GGTCTTAATCTGGTCATAGA+TGG | + | chr4.4:50228347-50228366 | MS.gene88188:CDS | 40.0% | |
| TGTCCATTGTGACGTAACAA+AGG | + | chr4.4:50227806-50227825 | MS.gene88188:CDS | 40.0% | |
| TGTGTGTCACCTTATGTTGT+TGG | + | chr4.4:50228179-50228198 | MS.gene88188:CDS | 40.0% | |
| TGTTACGTCACAATGGACAT+AGG | - | chr4.4:50227805-50227824 | None:intergenic | 40.0% | |
| TTATGTTGTTGGAACTCCGT+TGG | + | chr4.4:50228190-50228209 | MS.gene88188:CDS | 40.0% | |
| TTTAACAACGCAGGCATAAC+CGG | + | chr4.4:50227891-50227910 | MS.gene88188:CDS | 40.0% | |
| ! | GATGTCTAGTTTACCGTACT+TGG | - | chr4.4:50227868-50227887 | None:intergenic | 40.0% |
| ! | GTGATTGACATTAACTTGGC+TGG | + | chr4.4:50227963-50227982 | MS.gene88188:CDS | 40.0% |
| AGTGTTTGTGGATGCATAGG+TGG | + | chr4.4:50228059-50228078 | MS.gene88188:CDS | 45.0% | |
| ATTTGCAAGGCTTGAAGGGA+AGG | + | chr4.4:50227635-50227654 | MS.gene88188:intron | 45.0% | |
| CTTGGAAACGGTTGTGTTCA+CGG | - | chr4.4:50227850-50227869 | None:intergenic | 45.0% | |
| GCTAGTGTTTGTGGATGCAT+AGG | + | chr4.4:50228056-50228075 | MS.gene88188:CDS | 45.0% | |
| ! | GCTGAAGCTGCTTTGTACTT+GGG | + | chr4.4:50228299-50228318 | MS.gene88188:CDS | 45.0% |
| !!! | AATTATTCTAATTTTTTTTT+GGG | + | chr4.4:50227250-50227269 | MS.gene88188:intron | 5.0% |
| AAAAACACGGCCATCGAGCT+TGG | + | chr4.4:50228134-50228153 | MS.gene88188:CDS | 50.0% | |
| AGTTCAAAGCACGCCGTTGT+TGG | + | chr4.4:50228104-50228123 | MS.gene88188:CDS | 50.0% | |
| ATTATGCTACCTCGTCGAGC+AGG | - | chr4.4:50228029-50228048 | None:intergenic | 50.0% | |
| CTATAACGACTTGAGCTCCG+TGG | - | chr4.4:50227722-50227741 | None:intergenic | 50.0% | |
| CTTAGGGCAGCAGAAACCAA+AGG | - | chr4.4:50227057-50227076 | None:intergenic | 50.0% | |
| GCAAGACTCTTCTCCAACCA+CGG | + | chr4.4:50227702-50227721 | MS.gene88188:CDS | 50.0% | |
| GGGCTCACGGTCGAAAATAA+TGG | + | chr4.4:50228371-50228390 | MS.gene88188:CDS | 50.0% | |
| GTTCAAAGCACGCCGTTGTT+GGG | + | chr4.4:50228105-50228124 | MS.gene88188:CDS | 50.0% | |
| GTTGGAGAAGAGTCTTGCAG+TGG | - | chr4.4:50227700-50227719 | None:intergenic | 50.0% | |
| TGGTTTCTGCTGCCCTAAGA+AGG | + | chr4.4:50227058-50227077 | MS.gene88188:CDS | 50.0% | |
| TTATGCTACCTCGTCGAGCA+GGG | - | chr4.4:50228028-50228047 | None:intergenic | 50.0% | |
| TTGTGGATGCATAGGTGGTG+TGG | + | chr4.4:50228064-50228083 | MS.gene88188:CDS | 50.0% | |
| ! | GCAGCTTCAGCCACATCTTT+TGG | - | chr4.4:50228290-50228309 | None:intergenic | 50.0% |
| ! | GGCGTGCTTTGAACTTGTGT+AGG | - | chr4.4:50228099-50228118 | None:intergenic | 50.0% |
| ! | GGCTGAAGCTGCTTTGTACT+TGG | + | chr4.4:50228298-50228317 | MS.gene88188:CDS | 50.0% |
| !! | AAGGTAGCTCTGATCACAGG+TGG | + | chr4.4:50227654-50227673 | MS.gene88188:CDS | 50.0% |
| AACGACTTGAGCTCCGTGGT+TGG | - | chr4.4:50227718-50227737 | None:intergenic | 55.0% | |
| ACCGTATGGTCCAAGCTCGA+TGG | - | chr4.4:50228147-50228166 | None:intergenic | 55.0% | |
| CGGAACAAAGCACGCTGCTA+GGG | + | chr4.4:50227995-50228014 | MS.gene88188:CDS | 55.0% | |
| GCCATCGAGCTTGGACCATA+CGG | + | chr4.4:50228143-50228162 | MS.gene88188:CDS | 55.0% | |
| GGTCATAGATGGAGGGCTCA+CGG | + | chr4.4:50228358-50228377 | MS.gene88188:CDS | 55.0% | |
| GTAATGATCCCTGCTCGACG+AGG | + | chr4.4:50228017-50228036 | MS.gene88188:CDS | 55.0% | |
| TCGGAACAAAGCACGCTGCT+AGG | + | chr4.4:50227994-50228013 | MS.gene88188:CDS | 55.0% | |
| !! | GGGAAGGTAGCTCTGATCAC+AGG | + | chr4.4:50227651-50227670 | MS.gene88188:CDS | 55.0% |
| CTGATCACAGGTGGTGCGAG+CGG | + | chr4.4:50227663-50227682 | MS.gene88188:CDS | 60.0% | |
| ACAGGTGGTGCGAGCGGCAT+CGG | + | chr4.4:50227669-50227688 | MS.gene88188:CDS | 65.0% | |
| !! | TGGTGCGAGCGGCATCGGCG+AGG | + | chr4.4:50227674-50227693 | MS.gene88188:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 50227042 | 50228421 | 50227042 | ID=MS.gene88188 |
| chr4.4 | mRNA | 50227042 | 50228421 | 50227042 | ID=MS.gene88188.t1;Parent=MS.gene88188 |
| chr4.4 | exon | 50227042 | 50227079 | 50227042 | ID=MS.gene88188.t1.exon1;Parent=MS.gene88188.t1 |
| chr4.4 | CDS | 50227042 | 50227079 | 50227042 | ID=cds.MS.gene88188.t1;Parent=MS.gene88188.t1 |
| chr4.4 | exon | 50227644 | 50228421 | 50227644 | ID=MS.gene88188.t1.exon2;Parent=MS.gene88188.t1 |
| chr4.4 | CDS | 50227644 | 50228421 | 50227644 | ID=cds.MS.gene88188.t1;Parent=MS.gene88188.t1 |
| Gene Sequence |
| Protein sequence |
