Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88385.t1 | XP_003602786.1 | 77.6 | 98 | 5 | 1 | 201 | 298 | 142 | 222 | 3.50E-31 | 146 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88385.t1 | Q8RX71 | 59.7 | 77 | 31 | 0 | 5 | 81 | 137 | 213 | 1.4e-15 | 85.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88385.t1 | G7J3D6 | 77.6 | 98 | 5 | 1 | 201 | 298 | 142 | 222 | 2.5e-31 | 146.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene88385 | 0.838586 | 2.63E-57 | -1.69E-46 |
| MS.gene049343 | MS.gene88385 | 0.823526 | 1.32E-53 | -1.69E-46 |
| MS.gene049452 | MS.gene88385 | 0.825005 | 5.93E-54 | -1.69E-46 |
| MS.gene050941 | MS.gene88385 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene88385 | 0.806717 | 7.18E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene88385 | 0.847412 | 1.18E-59 | -1.69E-46 |
| MS.gene052773 | MS.gene88385 | 0.806285 | 8.86E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene88385 | 0.835632 | 1.50E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene88385 | 0.852022 | 6.06E-61 | -1.69E-46 |
| MS.gene054651 | MS.gene88385 | 0.819756 | 9.82E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene88385 | 0.800887 | 1.17E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene88385 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene88385 | 0.803908 | 2.79E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene88385 | 0.811623 | 6.38E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene88385 | 0.814699 | 1.35E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene88385 | 0.810702 | 1.01E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene88385 | 0.810269 | 1.25E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene88385 | 0.802197 | 6.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88385.t1 | MTR_3g098990 | 64.493 | 138 | 21 | 2 | 201 | 327 | 142 | 262 | 8.44e-47 | 167 |
| MS.gene88385.t1 | MTR_7g069610 | 89.189 | 74 | 8 | 0 | 3 | 76 | 132 | 205 | 9.37e-36 | 130 |
| MS.gene88385.t1 | MTR_2g032910 | 96.226 | 53 | 2 | 0 | 3 | 55 | 1 | 53 | 9.48e-27 | 101 |
| MS.gene88385.t1 | MTR_4g017810 | 54.321 | 81 | 37 | 0 | 3 | 83 | 116 | 196 | 1.46e-19 | 87.4 |
| MS.gene88385.t1 | MTR_3g058970 | 39.259 | 135 | 56 | 3 | 201 | 327 | 417 | 533 | 1.19e-18 | 88.2 |
| MS.gene88385.t1 | MTR_5g095720 | 40.708 | 113 | 50 | 1 | 201 | 313 | 490 | 585 | 4.21e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88385.t1 | AT5G63550 | 50.000 | 136 | 42 | 3 | 201 | 327 | 141 | 259 | 2.45e-31 | 124 |
| MS.gene88385.t1 | AT5G63550 | 56.637 | 113 | 31 | 2 | 201 | 312 | 141 | 236 | 1.12e-30 | 122 |
| MS.gene88385.t1 | AT3G48710 | 52.632 | 114 | 36 | 2 | 201 | 313 | 101 | 197 | 3.57e-30 | 120 |
| MS.gene88385.t1 | AT3G51780 | 58.228 | 79 | 33 | 0 | 5 | 83 | 137 | 215 | 3.09e-20 | 89.7 |
| MS.gene88385.t1 | AT5G55660 | 35.714 | 112 | 56 | 2 | 201 | 312 | 370 | 465 | 7.02e-11 | 64.3 |
Find 78 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCACTACTCTTGTTTAT+TGG | 0.137437 | 2.4:-17169953 | None:intergenic |
| CTGGTGGACACAATGTTATT+TGG | 0.218175 | 2.4:+17168648 | MS.gene88385:CDS |
| TGGTGGACACAATGTTATTT+GGG | 0.250228 | 2.4:+17168649 | MS.gene88385:CDS |
| AATCCAAGCAAAAGACTCTT+AGG | 0.331299 | 2.4:-17168701 | None:intergenic |
| GCTGGAGCTGGATGGTATTA+AGG | 0.331947 | 2.4:+17166887 | MS.gene88385:CDS |
| TGGTTACACAATCTCTGTTT+TGG | 0.346633 | 2.4:+17167227 | MS.gene88385:CDS |
| TTCAAAGCTGTTGGTGGTGC+TGG | 0.346906 | 2.4:+17170083 | MS.gene88385:CDS |
| AAATGGGATAGGAACCCTTT+TGG | 0.349341 | 2.4:+17170751 | MS.gene88385:CDS |
| TTGAAGCAAATCAATGTATC+AGG | 0.351192 | 2.4:-17168285 | None:intergenic |
| TCTTCCCAAACAGTATACTA+TGG | 0.363218 | 2.4:-17169483 | None:intergenic |
| CAATCCTTATGTCGATCTTA+AGG | 0.363766 | 2.4:+17168305 | MS.gene88385:CDS |
| AATAGAAGTATAATATCAAC+TGG | 0.365951 | 2.4:-17170781 | None:intergenic |
| TTTGATGGTGTTGAAATTCA+TGG | 0.380570 | 2.4:+17167198 | MS.gene88385:CDS |
| ATGCTCCATAGTATACTGTT+TGG | 0.382079 | 2.4:+17169478 | MS.gene88385:CDS |
| TTTCAAGCTGTTGCTGTAGT+AGG | 0.388247 | 2.4:+17166655 | MS.gene88385:CDS |
| GCTGACTTCCATTTCTGGCC+AGG | 0.398943 | 2.4:+17169543 | MS.gene88385:CDS |
| GCCTTGGATGTGGCTGTCAA+TGG | 0.409273 | 2.4:+17166804 | MS.gene88385:CDS |
| GTTGCTTATGAGGAAATTGC+TGG | 0.415619 | 2.4:+17166869 | MS.gene88385:CDS |
| AACAATCTAAAGAGGAATAT+AGG | 0.417865 | 2.4:+17169653 | MS.gene88385:CDS |
| TGCTCCATAGTATACTGTTT+GGG | 0.420968 | 2.4:+17169479 | MS.gene88385:CDS |
| AAAAGGGTTCCTATCCCATT+TGG | 0.423193 | 2.4:-17170749 | None:intergenic |
| AAGGACATGATGATATCTAT+TGG | 0.424202 | 2.4:+17168324 | MS.gene88385:CDS |
| CCCACGCATAACCAGAAAAC+TGG | 0.424594 | 2.4:-17169676 | None:intergenic |
| TGACTACAGAGTTGCTTATG+AGG | 0.441095 | 2.4:+17166859 | MS.gene88385:CDS |
| AGCCCTTTGATGAAGCTCTC+TGG | 0.452745 | 2.4:+17168011 | MS.gene88385:intron |
| GAAAACAAAGGTGATGTTGC+TGG | 0.456338 | 2.4:+17169504 | MS.gene88385:CDS |
| GCAGGTGTTGGCCTTGGATG+TGG | 0.469671 | 2.4:+17166794 | MS.gene88385:intron |
| CGGCCAAGGTTGCGATTTGA+CGG | 0.472968 | 2.4:+17168099 | MS.gene88385:CDS |
| AGCATATGCAGGTTGCCATC+AGG | 0.476906 | 2.4:-17169460 | None:intergenic |
| AATGAAAATACGACGGCTCA+TGG | 0.476933 | 2.4:+17168060 | MS.gene88385:CDS |
| TGATTATAATAGCTTGGAAC+AGG | 0.479418 | 2.4:+17170161 | MS.gene88385:CDS |
| TCAACTGGGTCATTCCCAAA+AGG | 0.485241 | 2.4:-17170766 | None:intergenic |
| AAAACAGAGAACAAGGGTAA+AGG | 0.493647 | 2.4:+17169871 | MS.gene88385:CDS |
| TATGAGGAAATTGCTGGAGC+TGG | 0.493825 | 2.4:+17166875 | MS.gene88385:CDS |
| TTGGATGTGGCTGTCAATGG+AGG | 0.496098 | 2.4:+17166807 | MS.gene88385:CDS |
| TTGTAGGTGCCAAATGGGAT+AGG | 0.506945 | 2.4:+17170740 | MS.gene88385:intron |
| AGGTGGACAAGCTTTGTGAC+AGG | 0.514120 | 2.4:+17166683 | MS.gene88385:CDS |
| CAACTGGGTCATTCCCAAAA+GGG | 0.525279 | 2.4:-17170765 | None:intergenic |
| AACAAGAGTAGTGGTGAAGA+AGG | 0.541606 | 2.4:+17169959 | MS.gene88385:CDS |
| GTATACTATGGAGCATATGC+AGG | 0.541768 | 2.4:-17169471 | None:intergenic |
| GGAACTGTCTTCAAAGCTGT+TGG | 0.544546 | 2.4:+17170074 | MS.gene88385:CDS |
| TAAGAAAGCGATTCTGGTGA+AGG | 0.555612 | 2.4:+17167410 | MS.gene88385:intron |
| AGGTGATGATTATAATAGCT+TGG | 0.556853 | 2.4:+17170155 | MS.gene88385:CDS |
| GAAAATGTGTCTCACGGCCA+AGG | 0.559670 | 2.4:+17168085 | MS.gene88385:CDS |
| GTCAGGTTAACAATCTAAAG+AGG | 0.562124 | 2.4:+17169645 | MS.gene88385:intron |
| ATGTCCTTAAGATCGACATA+AGG | 0.562412 | 2.4:-17168309 | None:intergenic |
| ACTGTCTTCAAAGCTGTTGG+TGG | 0.576536 | 2.4:+17170077 | MS.gene88385:CDS |
| CAAATAACATTGTGTCCACC+AGG | 0.577263 | 2.4:-17168647 | None:intergenic |
| TTGTGAATCTTGTGAGCAGA+GGG | 0.580456 | 2.4:-17168677 | None:intergenic |
| GTTGAAATTCATGGAGCTCA+TGG | 0.586021 | 2.4:+17167207 | MS.gene88385:CDS |
| TTTGATGAAGCTCTCTGGAG+CGG | 0.587452 | 2.4:+17168016 | MS.gene88385:intron |
| GGTGGACACAATGTTATTTG+GGG | 0.591154 | 2.4:+17168650 | MS.gene88385:CDS |
| AGCGATTCTGGTGAAGGTGT+CGG | 0.594655 | 2.4:+17167416 | MS.gene88385:intron |
| TTACCGTCAAATCGCAACCT+TGG | 0.595041 | 2.4:-17168102 | None:intergenic |
| TTAAGGCTGAAGGTGAAGCT+AGG | 0.598267 | 2.4:+17166904 | MS.gene88385:CDS |
| GGTGGACAAGCTTTGTGACA+GGG | 0.600958 | 2.4:+17166684 | MS.gene88385:CDS |
| TGGATGTGGCTGTCAATGGA+GGG | 0.601202 | 2.4:+17166808 | MS.gene88385:CDS |
| CTGGATGGTATTAAGGCTGA+AGG | 0.605506 | 2.4:+17166894 | MS.gene88385:CDS |
| AGGAAATTGCTGGAGCTGGA+TGG | 0.613422 | 2.4:+17166879 | MS.gene88385:CDS |
| ATTCCAATAAACAAGAGTAG+TGG | 0.620230 | 2.4:+17169950 | MS.gene88385:CDS |
| TGCTGTAGTAGGATCAGAGG+TGG | 0.625789 | 2.4:+17166666 | MS.gene88385:CDS |
| AGAGAACAAGGGTAAAGGAG+AGG | 0.625869 | 2.4:+17169876 | MS.gene88385:CDS |
| AAATTCTTTGTCAGAAACCG+TGG | 0.626027 | 2.4:-17166832 | None:intergenic |
| ATGGCGGAAAATGTGTCTCA+CGG | 0.626613 | 2.4:+17168079 | MS.gene88385:CDS |
| GGCTGTCAATGGAGGGACCA+CGG | 0.626800 | 2.4:+17166815 | MS.gene88385:CDS |
| TCCATTGACAGCCACATCCA+AGG | 0.628433 | 2.4:-17166805 | None:intergenic |
| TTATGCGTGGGCTGAAAATG+AGG | 0.637872 | 2.4:+17169688 | MS.gene88385:CDS |
| TGGTGAAGGTGTCGGCGGAG+AGG | 0.640871 | 2.4:+17167424 | MS.gene88385:CDS |
| TGTTGCTGTAGTAGGATCAG+AGG | 0.643755 | 2.4:+17166663 | MS.gene88385:CDS |
| TAGGTTGCAGAGAAAAGCTG+AGG | 0.646000 | 2.4:+17166923 | MS.gene88385:CDS |
| ATTGTGAATCTTGTGAGCAG+AGG | 0.647355 | 2.4:-17168678 | None:intergenic |
| TTGTCAAAGAGAAAACCTGA+TGG | 0.669312 | 2.4:+17169445 | MS.gene88385:CDS |
| ATACTTAAATGAAAATACGA+CGG | 0.677422 | 2.4:+17168053 | MS.gene88385:CDS |
| GTGGCTATGAAAGTGACCCA+TGG | 0.679002 | 2.4:+17167456 | MS.gene88385:CDS |
| GATTCTGGTGAAGGTGTCGG+CGG | 0.682855 | 2.4:+17167419 | MS.gene88385:CDS |
| ACTGTTTGGGAAGAAAACAA+AGG | 0.691158 | 2.4:+17169492 | MS.gene88385:CDS |
| GAAAATACGACGGCTCATGG+CGG | 0.694524 | 2.4:+17168063 | MS.gene88385:CDS |
| ATAGAAGTATAATATCAACT+GGG | 0.754814 | 2.4:-17170780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTTATAATTGTATATA+GGG | + | chr2.4:17170441-17170460 | MS.gene88385:intron | 10.0% |
| !!! | GTTATTTTAAAAAAAAACTA+TGG | + | chr2.4:17168951-17168970 | MS.gene88385:intron | 10.0% |
| !!! | TAAAATATCATTCAAATTTT+CGG | - | chr2.4:17169127-17169146 | None:intergenic | 10.0% |
| !! | AGGTTGTTAAAAATTAAAAA+TGG | + | chr2.4:17167105-17167124 | MS.gene88385:intron | 15.0% |
| !! | CATTGTTTATAATTGTATAT+AGG | + | chr2.4:17170440-17170459 | MS.gene88385:intron | 15.0% |
| !! | CTATATACAATTATAAACAA+TGG | - | chr2.4:17170442-17170461 | None:intergenic | 15.0% |
| !!! | AAACATTCAAATTTTTCATT+AGG | + | chr2.4:17170276-17170295 | MS.gene88385:intron | 15.0% |
| !!! | ATTATATGTATCATGAATTT+TGG | - | chr2.4:17169270-17169289 | None:intergenic | 15.0% |
| !!! | TTAAAAAAAAACTATGGTTT+TGG | + | chr2.4:17168957-17168976 | MS.gene88385:intron | 15.0% |
| !!! | TTTGGTTGATAAAAAATTTA+TGG | + | chr2.4:17169151-17169170 | MS.gene88385:intron | 15.0% |
| !! | AAAAATTAAAAATGGAGTGT+TGG | + | chr2.4:17167113-17167132 | MS.gene88385:intron | 20.0% |
| !! | AATAGATAAACTAACCTAAT+AGG | - | chr2.4:17168504-17168523 | None:intergenic | 20.0% |
| !! | ACAAGAAAGTTTACAAAAAT+AGG | + | chr2.4:17170135-17170154 | MS.gene88385:CDS | 20.0% |
| !! | ATACTTAAATGAAAATACGA+CGG | + | chr2.4:17168053-17168072 | MS.gene88385:CDS | 20.0% |
| !! | CATGATACATAAAATTTATG+AGG | + | chr2.4:17169307-17169326 | MS.gene88385:intron | 20.0% |
| !! | CTATCTCTAATTATTCAAAA+AGG | + | chr2.4:17170187-17170206 | MS.gene88385:intron | 20.0% |
| !! | TAACTACTACTCAAAATATA+TGG | + | chr2.4:17167256-17167275 | MS.gene88385:intron | 20.0% |
| !! | TAATAATAATATGGGAAACA+TGG | - | chr2.4:17166714-17166733 | None:intergenic | 20.0% |
| !! | TCTTAAAATAAGAATCAGAA+AGG | + | chr2.4:17167767-17167786 | MS.gene88385:intron | 20.0% |
| !!! | AATAGAAGTATAATATCAAC+TGG | - | chr2.4:17170784-17170803 | None:intergenic | 20.0% |
| !!! | ATAGAAGTATAATATCAACT+GGG | - | chr2.4:17170783-17170802 | None:intergenic | 20.0% |
| !!! | ATTGTTGTATTTCTATATAG+TGG | + | chr2.4:17169348-17169367 | MS.gene88385:intron | 20.0% |
| !!! | ATTTTTATGTTATCAACCAA+AGG | - | chr2.4:17169199-17169218 | None:intergenic | 20.0% |
| !!! | CTCATAAATTTTATGTATCA+TGG | - | chr2.4:17169309-17169328 | None:intergenic | 20.0% |
| !!! | GTTGATAACATAAAAATTGA+AGG | + | chr2.4:17169202-17169221 | MS.gene88385:intron | 20.0% |
| !!! | TACATAGTTCTTTAAAAACA+TGG | - | chr2.4:17168861-17168880 | None:intergenic | 20.0% |
| !!! | TATATCATTTTTGAATCCAA+AGG | + | chr2.4:17169992-17170011 | MS.gene88385:intron | 20.0% |
| !!! | TGAATGATATTTTATGACTT+TGG | + | chr2.4:17169133-17169152 | MS.gene88385:intron | 20.0% |
| !!! | TTTAATACCATGATTTTGTT+TGG | - | chr2.4:17167044-17167063 | None:intergenic | 20.0% |
| !!! | TTTATTTACCATTTTAGAAG+TGG | - | chr2.4:17170028-17170047 | None:intergenic | 20.0% |
| !!! | TTTCGAACTTTTTAAGTTTT+TGG | + | chr2.4:17167077-17167096 | MS.gene88385:intron | 20.0% |
| !!! | TTTTTAAGTTTTTGGAATCT+AGG | + | chr2.4:17167085-17167104 | MS.gene88385:intron | 20.0% |
| ! | AACAAATCATTAACAACACA+AGG | - | chr2.4:17167352-17167371 | None:intergenic | 25.0% |
| ! | AACAATCTAAAGAGGAATAT+AGG | + | chr2.4:17169653-17169672 | MS.gene88385:CDS | 25.0% |
| ! | AAGAGCTTAATGTCAAAAAA+TGG | - | chr2.4:17170215-17170234 | None:intergenic | 25.0% |
| ! | AAGTAGGAAAACACATAAAT+AGG | - | chr2.4:17167527-17167546 | None:intergenic | 25.0% |
| ! | ACAAATCATTAACAACACAA+GGG | - | chr2.4:17167351-17167370 | None:intergenic | 25.0% |
| ! | AGAGCTTAATGTCAAAAAAT+GGG | - | chr2.4:17170214-17170233 | None:intergenic | 25.0% |
| ! | ATAAGAATCAGAAAGGTTTA+TGG | + | chr2.4:17167774-17167793 | MS.gene88385:intron | 25.0% |
| ! | ATAAGTCTAATTTCTGACTA+CGG | + | chr2.4:17167988-17168007 | MS.gene88385:intron | 25.0% |
| ! | GCATATTTGCAATTATTGAT+TGG | + | chr2.4:17170332-17170351 | MS.gene88385:intron | 25.0% |
| ! | GGTTAAACCTAAAATGATAA+TGG | + | chr2.4:17168256-17168275 | MS.gene88385:intron | 25.0% |
| ! | TACACTTGAAACTTAAAAGA+AGG | + | chr2.4:17167630-17167649 | MS.gene88385:intron | 25.0% |
| ! | TGATAGTTTATGTCTAACAA+AGG | + | chr2.4:17170557-17170576 | MS.gene88385:intron | 25.0% |
| ! | TTGTTGTAATATGTTTCCAA+TGG | + | chr2.4:17167367-17167386 | MS.gene88385:intron | 25.0% |
| !! | ATCATGGATTATATGTATCA+TGG | - | chr2.4:17169277-17169296 | None:intergenic | 25.0% |
| !! | ATTTATTGAATGCATTTTGC+AGG | + | chr2.4:17167841-17167860 | MS.gene88385:intron | 25.0% |
| !! | GTATTAGTTTATCCTTAGAA+TGG | + | chr2.4:17170514-17170533 | MS.gene88385:intron | 25.0% |
| !! | TTATGGCAAGAATTCTTTTT+GGG | + | chr2.4:17169168-17169187 | MS.gene88385:intron | 25.0% |
| !! | TTTATGGCAAGAATTCTTTT+TGG | + | chr2.4:17169167-17169186 | MS.gene88385:intron | 25.0% |
| !!! | AACGAAAATATTTTGACCAT+TGG | - | chr2.4:17167386-17167405 | None:intergenic | 25.0% |
| !!! | AATAACGGTAATTTTAGTCT+TGG | - | chr2.4:17168937-17168956 | None:intergenic | 25.0% |
| !!! | AATGACTTTTTTTAGTGTAC+AGG | + | chr2.4:17169084-17169103 | MS.gene88385:intron | 25.0% |
| !!! | ATTACTGATTGTAATTTTGC+AGG | + | chr2.4:17166776-17166795 | MS.gene88385:intron | 25.0% |
| !!! | CTTTAAAAACATGGCAATTT+TGG | - | chr2.4:17168852-17168871 | None:intergenic | 25.0% |
| !!! | GTTTTGAATTTCTTTGACTT+TGG | + | chr2.4:17167304-17167323 | MS.gene88385:intron | 25.0% |
| !!! | TAAAACTATAGGGTTTGTTT+TGG | + | chr2.4:17168428-17168447 | MS.gene88385:intron | 25.0% |
| !!! | TAACAAAACATGTTTTCAAG+AGG | + | chr2.4:17170053-17170072 | MS.gene88385:intron | 25.0% |
| !!! | TTCATTATCGTTGATTCTAA+CGG | + | chr2.4:17167725-17167744 | MS.gene88385:intron | 25.0% |
| !!! | TTTTTTTTAAGACAATCTCC+TGG | + | chr2.4:17168629-17168648 | MS.gene88385:CDS | 25.0% |
| AAAAGCTGAGGTAATGTTTA+TGG | + | chr2.4:17166935-17166954 | MS.gene88385:intron | 30.0% | |
| AACTATATTAGACAACACTG+AGG | - | chr2.4:17169392-17169411 | None:intergenic | 30.0% | |
| AAGGACATGATGATATCTAT+TGG | + | chr2.4:17168324-17168343 | MS.gene88385:CDS | 30.0% | |
| AATATGAAGAGCAGGAAATA+AGG | - | chr2.4:17168152-17168171 | None:intergenic | 30.0% | |
| AGATAAACTAACCTAATAGG+AGG | - | chr2.4:17168501-17168520 | None:intergenic | 30.0% | |
| AGGTGATGATTATAATAGCT+TGG | + | chr2.4:17170155-17170174 | MS.gene88385:CDS | 30.0% | |
| AGTTTATCCTTAGAATGGAA+TGG | + | chr2.4:17170519-17170538 | MS.gene88385:intron | 30.0% | |
| ATAATATGTCAGCAAAAACC+TGG | - | chr2.4:17169564-17169583 | None:intergenic | 30.0% | |
| ATATGTGCCAAACAAAATCA+TGG | + | chr2.4:17167034-17167053 | MS.gene88385:intron | 30.0% | |
| ATCTACATCTTCACAACTAT+TGG | + | chr2.4:17169843-17169862 | MS.gene88385:intron | 30.0% | |
| ATTAGGTGAAAATGATTGCA+TGG | + | chr2.4:17170293-17170312 | MS.gene88385:intron | 30.0% | |
| ATTCCAATAAACAAGAGTAG+TGG | + | chr2.4:17169950-17169969 | MS.gene88385:CDS | 30.0% | |
| CATACTAATTTCCCTAGATT+GGG | + | chr2.4:17168222-17168241 | MS.gene88385:intron | 30.0% | |
| GAAGATGTAGATTTAATTGC+AGG | - | chr2.4:17169835-17169854 | None:intergenic | 30.0% | |
| GATAAACTAACCTAATAGGA+GGG | - | chr2.4:17168500-17168519 | None:intergenic | 30.0% | |
| GTAAAAAACTTAACCATCAC+AGG | - | chr2.4:17168184-17168203 | None:intergenic | 30.0% | |
| TAGATATGAATCTTTGTGAG+TGG | + | chr2.4:17169749-17169768 | MS.gene88385:intron | 30.0% | |
| TAGATGACATTGTAATGTGT+CGG | + | chr2.4:17170366-17170385 | MS.gene88385:intron | 30.0% | |
| TATGACAAACAACAATGTTC+AGG | + | chr2.4:17170238-17170257 | MS.gene88385:intron | 30.0% | |
| TCGCTGTAATTTATGAATTG+AGG | + | chr2.4:17167282-17167301 | MS.gene88385:intron | 30.0% | |
| TGATTATAATAGCTTGGAAC+AGG | + | chr2.4:17170161-17170180 | MS.gene88385:CDS | 30.0% | |
| TGTTCAGGTCTTGAATAATT+TGG | + | chr2.4:17170253-17170272 | MS.gene88385:intron | 30.0% | |
| TTATGTGTAAACTGTTTCAG+TGG | + | chr2.4:17169414-17169433 | MS.gene88385:intron | 30.0% | |
| TTGAAGCAAATCAATGTATC+AGG | - | chr2.4:17168288-17168307 | None:intergenic | 30.0% | |
| TTTCATAATCACCCAATCTA+GGG | - | chr2.4:17168236-17168255 | None:intergenic | 30.0% | |
| ! | CACAACTTATTGATGGTATT+TGG | + | chr2.4:17167702-17167721 | MS.gene88385:intron | 30.0% |
| ! | TTCAAGTACCACTTCTAAAA+TGG | + | chr2.4:17170017-17170036 | MS.gene88385:intron | 30.0% |
| ! | TTCTTTTCCATTCCATTCTA+AGG | - | chr2.4:17170529-17170548 | None:intergenic | 30.0% |
| ! | TTTAAAGCTTGCTCAATGTT+TGG | - | chr2.4:17170609-17170628 | None:intergenic | 30.0% |
| ! | TTTTGATAAGAAAGCGATTC+TGG | + | chr2.4:17167404-17167423 | MS.gene88385:intron | 30.0% |
| !! | AACCTAAAATGATAATGGCA+AGG | + | chr2.4:17168261-17168280 | MS.gene88385:intron | 30.0% |
| !! | ACATTGAGCAAGCTTTAAAA+TGG | + | chr2.4:17170610-17170629 | MS.gene88385:intron | 30.0% |
| !! | ACTCATGTCTCTAAAACTAT+AGG | + | chr2.4:17168417-17168436 | MS.gene88385:intron | 30.0% |
| !! | CTCATGTCTCTAAAACTATA+GGG | + | chr2.4:17168418-17168437 | MS.gene88385:intron | 30.0% |
| !! | GATTTTGTTTGGCACATATA+TGG | - | chr2.4:17167033-17167052 | None:intergenic | 30.0% |
| !! | TTTGATGGTGTTGAAATTCA+TGG | + | chr2.4:17167198-17167217 | MS.gene88385:CDS | 30.0% |
| !!! | AAAAAAACTATGGTTTTGGC+TGG | + | chr2.4:17168961-17168980 | MS.gene88385:intron | 30.0% |
| !!! | GGTTAAGTTTTTTACTGCTA+TGG | + | chr2.4:17168189-17168208 | MS.gene88385:intron | 30.0% |
| AAAACAGAGAACAAGGGTAA+AGG | + | chr2.4:17169871-17169890 | MS.gene88385:CDS | 35.0% | |
| AAAATGATTGCATGGCTGAT+GGG | + | chr2.4:17170301-17170320 | MS.gene88385:intron | 35.0% | |
| AAATTCTTTGTCAGAAACCG+TGG | - | chr2.4:17166835-17166854 | None:intergenic | 35.0% | |
| AAGTGGTACTTGAATTCCTT+TGG | - | chr2.4:17170011-17170030 | None:intergenic | 35.0% | |
| AATCCAAGCAAAAGACTCTT+AGG | - | chr2.4:17168704-17168723 | None:intergenic | 35.0% | |
| ACCAAAAACATGCAGAAAAG+AGG | - | chr2.4:17167484-17167503 | None:intergenic | 35.0% | |
| ACTGTTTGGGAAGAAAACAA+AGG | + | chr2.4:17169492-17169511 | MS.gene88385:CDS | 35.0% | |
| AGAACTATGTATGCTTCGAT+TGG | + | chr2.4:17168870-17168889 | MS.gene88385:intron | 35.0% | |
| AGATGCACAATTCAGACAAA+TGG | - | chr2.4:17170710-17170729 | None:intergenic | 35.0% | |
| ATGCTCCATAGTATACTGTT+TGG | + | chr2.4:17169478-17169497 | MS.gene88385:CDS | 35.0% | |
| ATGTCCTTAAGATCGACATA+AGG | - | chr2.4:17168312-17168331 | None:intergenic | 35.0% | |
| CAATCCTTATGTCGATCTTA+AGG | + | chr2.4:17168305-17168324 | MS.gene88385:CDS | 35.0% | |
| CCAAAAACATGCAGAAAAGA+GGG | - | chr2.4:17167483-17167502 | None:intergenic | 35.0% | |
| CGAATGACTCCATATGATAT+GGG | + | chr2.4:17167872-17167891 | MS.gene88385:intron | 35.0% | |
| CTAGATTGGGTGATTATGAA+AGG | + | chr2.4:17168235-17168254 | MS.gene88385:intron | 35.0% | |
| CTTTCATAATCACCCAATCT+AGG | - | chr2.4:17168237-17168256 | None:intergenic | 35.0% | |
| GATAACTCATGTGCGATATT+TGG | + | chr2.4:17167549-17167568 | MS.gene88385:intron | 35.0% | |
| GATGCACAATTCAGACAAAT+GGG | - | chr2.4:17170709-17170728 | None:intergenic | 35.0% | |
| GCAGAAAAAACAGAGAACAA+GGG | + | chr2.4:17169865-17169884 | MS.gene88385:intron | 35.0% | |
| GCATACTAATTTCCCTAGAT+TGG | + | chr2.4:17168221-17168240 | MS.gene88385:intron | 35.0% | |
| GTCAGGTTAACAATCTAAAG+AGG | + | chr2.4:17169645-17169664 | MS.gene88385:intron | 35.0% | |
| TAACTGCATGTTAGGAATCA+CGG | - | chr2.4:17169057-17169076 | None:intergenic | 35.0% | |
| TACTGAGATATTACCACCTT+CGG | - | chr2.4:17170649-17170668 | None:intergenic | 35.0% | |
| TCACTTGCACAACTTATTGA+TGG | + | chr2.4:17167695-17167714 | MS.gene88385:intron | 35.0% | |
| TCGAATGACTCCATATGATA+TGG | + | chr2.4:17167871-17167890 | MS.gene88385:intron | 35.0% | |
| TCTTCCCAAACAGTATACTA+TGG | - | chr2.4:17169486-17169505 | None:intergenic | 35.0% | |
| TGCAAAAGTAACTGCATGTT+AGG | - | chr2.4:17169065-17169084 | None:intergenic | 35.0% | |
| TGCTCCATAGTATACTGTTT+GGG | + | chr2.4:17169479-17169498 | MS.gene88385:CDS | 35.0% | |
| TGGAACGCGAGAAAATTAAT+TGG | - | chr2.4:17168917-17168936 | None:intergenic | 35.0% | |
| TTCCTGCTCTTCATATTGAT+TGG | + | chr2.4:17168155-17168174 | MS.gene88385:intron | 35.0% | |
| TTGTCAAAGAGAAAACCTGA+TGG | + | chr2.4:17169445-17169464 | MS.gene88385:CDS | 35.0% | |
| ! | AATCCTAAGAGTCTTTTGCT+TGG | + | chr2.4:17168698-17168717 | MS.gene88385:CDS | 35.0% |
| ! | AGTCTTTTGCTTGGATTTCT+TGG | + | chr2.4:17168707-17168726 | MS.gene88385:CDS | 35.0% |
| ! | GACCTTGCCATTATCATTTT+AGG | - | chr2.4:17168266-17168285 | None:intergenic | 35.0% |
| ! | GATTGTAATTTTGCAGGTGT+TGG | + | chr2.4:17166782-17166801 | MS.gene88385:intron | 35.0% |
| ! | TCACCACTACTCTTGTTTAT+TGG | - | chr2.4:17169956-17169975 | None:intergenic | 35.0% |
| ! | TGATTTTGTAGGTGCCAAAT+GGG | + | chr2.4:17170735-17170754 | MS.gene88385:intron | 35.0% |
| ! | TGGTGGACACAATGTTATTT+GGG | + | chr2.4:17168649-17168668 | MS.gene88385:CDS | 35.0% |
| ! | TGGTTACACAATCTCTGTTT+TGG | + | chr2.4:17167227-17167246 | MS.gene88385:CDS | 35.0% |
| ! | TTGATTTTGTAGGTGCCAAA+TGG | + | chr2.4:17170734-17170753 | MS.gene88385:intron | 35.0% |
| !! | ATGCAAATTGCAGGTTTTGA+TGG | + | chr2.4:17167183-17167202 | MS.gene88385:intron | 35.0% |
| !!! | TTCTTTTTGGGTAAAGCCTT+TGG | + | chr2.4:17169180-17169199 | MS.gene88385:intron | 35.0% |
| !!! | TTTTTAAGACAATCTCCTGG+TGG | + | chr2.4:17168632-17168651 | MS.gene88385:CDS | 35.0% |
| !!! | TTTTTGCTGACTTCCATTTC+TGG | + | chr2.4:17169538-17169557 | MS.gene88385:CDS | 35.0% |
| !!! | TTTTTTTAGTGTACAGGTGC+TGG | + | chr2.4:17169090-17169109 | MS.gene88385:intron | 35.0% |
| AAAAGGGTTCCTATCCCATT+TGG | - | chr2.4:17170752-17170771 | None:intergenic | 40.0% | |
| AACAAGAGTAGTGGTGAAGA+AGG | + | chr2.4:17169959-17169978 | MS.gene88385:CDS | 40.0% | |
| AATGAAAATACGACGGCTCA+TGG | + | chr2.4:17168060-17168079 | MS.gene88385:CDS | 40.0% | |
| ACATGATGATCTGATCCGTA+TGG | + | chr2.4:17169799-17169818 | MS.gene88385:intron | 40.0% | |
| ACTATGTATGCTTCGATTGG+CGG | + | chr2.4:17168873-17168892 | MS.gene88385:intron | 40.0% | |
| AGAGGCTTTCCCATATCATA+TGG | - | chr2.4:17167884-17167903 | None:intergenic | 40.0% | |
| ATTGTGAATCTTGTGAGCAG+AGG | - | chr2.4:17168681-17168700 | None:intergenic | 40.0% | |
| CAAATAACATTGTGTCCACC+AGG | - | chr2.4:17168650-17168669 | None:intergenic | 40.0% | |
| CACCAATCAATATGAAGAGC+AGG | - | chr2.4:17168160-17168179 | None:intergenic | 40.0% | |
| CCTCTTGTCTGTGTTGAAAA+TGG | + | chr2.4:17167899-17167918 | MS.gene88385:intron | 40.0% | |
| CTCAATGTGATGCAAATTGC+AGG | + | chr2.4:17167174-17167193 | MS.gene88385:intron | 40.0% | |
| CTTGTCTGTGTTGAAAATGG+CGG | + | chr2.4:17167902-17167921 | MS.gene88385:intron | 40.0% | |
| GAAAACAAAGGTGATGTTGC+TGG | + | chr2.4:17169504-17169523 | MS.gene88385:CDS | 40.0% | |
| GAAAATGATTGCATGGCTGA+TGG | + | chr2.4:17170300-17170319 | MS.gene88385:intron | 40.0% | |
| GCAGGTTAATATCAGCCATA+CGG | - | chr2.4:17169817-17169836 | None:intergenic | 40.0% | |
| GGCAGAAAAAACAGAGAACA+AGG | + | chr2.4:17169864-17169883 | MS.gene88385:intron | 40.0% | |
| GTATACTATGGAGCATATGC+AGG | - | chr2.4:17169474-17169493 | None:intergenic | 40.0% | |
| GTTGAAATTCATGGAGCTCA+TGG | + | chr2.4:17167207-17167226 | MS.gene88385:CDS | 40.0% | |
| GTTGCTTATGAGGAAATTGC+TGG | + | chr2.4:17166869-17166888 | MS.gene88385:CDS | 40.0% | |
| TAACTGAACTCCCTCCTATT+AGG | + | chr2.4:17168487-17168506 | MS.gene88385:intron | 40.0% | |
| TAAGAAAGCGATTCTGGTGA+AGG | + | chr2.4:17167410-17167429 | MS.gene88385:intron | 40.0% | |
| TGACTACAGAGTTGCTTATG+AGG | + | chr2.4:17166859-17166878 | MS.gene88385:CDS | 40.0% | |
| TGTTAACCTGACAACCATTC+AGG | - | chr2.4:17169637-17169656 | None:intergenic | 40.0% | |
| TTGTGAATCTTGTGAGCAGA+GGG | - | chr2.4:17168680-17168699 | None:intergenic | 40.0% | |
| TTTCAAGCTGTTGCTGTAGT+AGG | + | chr2.4:17166655-17166674 | MS.gene88385:CDS | 40.0% | |
| ! | AAAGCTTGCTCAATGTTTGG+AGG | - | chr2.4:17170606-17170625 | None:intergenic | 40.0% |
| ! | AAATGGGATAGGAACCCTTT+TGG | + | chr2.4:17170751-17170770 | MS.gene88385:CDS | 40.0% |
| ! | AATGGGATAGGAACCCTTTT+GGG | + | chr2.4:17170752-17170771 | MS.gene88385:CDS | 40.0% |
| ! | AGGAATATAGGCCAGTTTTC+TGG | + | chr2.4:17169665-17169684 | MS.gene88385:CDS | 40.0% |
| ! | CCATTTTCAACACAGACAAG+AGG | - | chr2.4:17167902-17167921 | None:intergenic | 40.0% |
| ! | CCCTCTTTTCTGCATGTTTT+TGG | + | chr2.4:17167480-17167499 | MS.gene88385:intron | 40.0% |
| ! | CTGGTGGACACAATGTTATT+TGG | + | chr2.4:17168648-17168667 | MS.gene88385:CDS | 40.0% |
| ! | GCACATGAGTTATCTGAAGT+AGG | - | chr2.4:17167543-17167562 | None:intergenic | 40.0% |
| ! | GCAGTGAACCATTGTGATTT+TGG | + | chr2.4:17168998-17169017 | MS.gene88385:intron | 40.0% |
| ! | GCATCTCTGCTTGATTTTGT+AGG | + | chr2.4:17170724-17170743 | MS.gene88385:intron | 40.0% |
| ! | GGTGGACACAATGTTATTTG+GGG | + | chr2.4:17168650-17168669 | MS.gene88385:CDS | 40.0% |
| ! | TATTGATTGGTGACCTGTGA+TGG | + | chr2.4:17168168-17168187 | MS.gene88385:intron | 40.0% |
| !! | ATGGAGTGTTGGAATAGTGT+TGG | + | chr2.4:17167124-17167143 | MS.gene88385:intron | 40.0% |
| !! | CTCACAAGTTTGTTGTCACA+GGG | + | chr2.4:17168594-17168613 | MS.gene88385:intron | 40.0% |
| !! | GGTGATTCATGTTTGTTGTC+TGG | + | chr2.4:17168449-17168468 | MS.gene88385:intron | 40.0% |
| !! | TCATGTGCGATATTTGGTGT+GGG | + | chr2.4:17167555-17167574 | MS.gene88385:intron | 40.0% |
| !! | TCTCACAAGTTTGTTGTCAC+AGG | + | chr2.4:17168593-17168612 | MS.gene88385:intron | 40.0% |
| !!! | AAAACTATGGTTTTGGCTGG+CGG | + | chr2.4:17168964-17168983 | MS.gene88385:intron | 40.0% |
| AAAATGGCGGTCATGCTTGA+AGG | + | chr2.4:17167915-17167934 | MS.gene88385:intron | 45.0% | |
| AAATGGCGGTCATGCTTGAA+GGG | + | chr2.4:17167916-17167935 | MS.gene88385:intron | 45.0% | |
| ACTGTCTTCAAAGCTGTTGG+TGG | + | chr2.4:17170077-17170096 | MS.gene88385:CDS | 45.0% | |
| AGAGAACAAGGGTAAAGGAG+AGG | + | chr2.4:17169876-17169895 | MS.gene88385:CDS | 45.0% | |
| AGCAAAAACCTGGCCAGAAA+TGG | - | chr2.4:17169554-17169573 | None:intergenic | 45.0% | |
| ATGCAGAAAAGAGGGACCAT+GGG | - | chr2.4:17167475-17167494 | None:intergenic | 45.0% | |
| CAACTGGGTCATTCCCAAAA+GGG | - | chr2.4:17170768-17170787 | None:intergenic | 45.0% | |
| CTCCAGAGAGCTTCATCAAA+GGG | - | chr2.4:17168016-17168035 | None:intergenic | 45.0% | |
| CTGGATGGTATTAAGGCTGA+AGG | + | chr2.4:17166894-17166913 | MS.gene88385:CDS | 45.0% | |
| GATGAAGACAGAGAGCAAGT+TGG | - | chr2.4:17170672-17170691 | None:intergenic | 45.0% | |
| GCTATTCCTGAATGGTTGTC+AGG | + | chr2.4:17169628-17169647 | MS.gene88385:intron | 45.0% | |
| GGAACTGTCTTCAAAGCTGT+TGG | + | chr2.4:17170074-17170093 | MS.gene88385:CDS | 45.0% | |
| TAAGCTCCAAAGTGTAGCGT+TGG | - | chr2.4:17169024-17169043 | None:intergenic | 45.0% | |
| TAGGTTGCAGAGAAAAGCTG+AGG | + | chr2.4:17166923-17166942 | MS.gene88385:CDS | 45.0% | |
| TATGAGGAAATTGCTGGAGC+TGG | + | chr2.4:17166875-17166894 | MS.gene88385:CDS | 45.0% | |
| TCAACTGGGTCATTCCCAAA+AGG | - | chr2.4:17170769-17170788 | None:intergenic | 45.0% | |
| TGTTGCTGTAGTAGGATCAG+AGG | + | chr2.4:17166663-17166682 | MS.gene88385:CDS | 45.0% | |
| TTAAGGCTGAAGGTGAAGCT+AGG | + | chr2.4:17166904-17166923 | MS.gene88385:CDS | 45.0% | |
| TTACCGTCAAATCGCAACCT+TGG | - | chr2.4:17168105-17168124 | None:intergenic | 45.0% | |
| TTGTAGGTGCCAAATGGGAT+AGG | + | chr2.4:17170740-17170759 | MS.gene88385:intron | 45.0% | |
| ! | ATGGCGGAAAATGTGTCTCA+CGG | + | chr2.4:17168079-17168098 | MS.gene88385:CDS | 45.0% |
| ! | CTCATGTGCGATATTTGGTG+TGG | + | chr2.4:17167554-17167573 | MS.gene88385:intron | 45.0% |
| ! | TTATGCGTGGGCTGAAAATG+AGG | + | chr2.4:17169688-17169707 | MS.gene88385:CDS | 45.0% |
| ! | TTTGATGAAGCTCTCTGGAG+CGG | + | chr2.4:17168016-17168035 | MS.gene88385:intron | 45.0% |
| ! | TTTTGGCCAACGCTACACTT+TGG | + | chr2.4:17169015-17169034 | MS.gene88385:intron | 45.0% |
| !! | AATAGCAGCAGAGGTGTTAG+AGG | - | chr2.4:17169614-17169633 | None:intergenic | 45.0% |
| !! | AGCGTTGGCCAAAATCACAA+TGG | - | chr2.4:17169009-17169028 | None:intergenic | 45.0% |
| !! | CAAGTTTGTTGTCACAGGGT+TGG | + | chr2.4:17168598-17168617 | MS.gene88385:intron | 45.0% |
| !! | GAGTGTTGGAATAGTGTTGG+TGG | + | chr2.4:17167127-17167146 | MS.gene88385:intron | 45.0% |
| !! | GTAATGTGTCGGCTCTTGTT+GGG | + | chr2.4:17170377-17170396 | MS.gene88385:intron | 45.0% |
| !! | TGTAATGTGTCGGCTCTTGT+TGG | + | chr2.4:17170376-17170395 | MS.gene88385:intron | 45.0% |
| !!! | AATTTTGCAGGTGTTGGCCT+TGG | + | chr2.4:17166788-17166807 | MS.gene88385:intron | 45.0% |
| !!! | CCAGTTTTCTGGTTATGCGT+GGG | + | chr2.4:17169676-17169695 | MS.gene88385:CDS | 45.0% |
| !! | ATAATGAATAATAATAATAT+GGG | - | chr2.4:17166722-17166741 | None:intergenic | 5.0% |
| !! | ATATTATTTCATTTATTTAA+AGG | + | chr2.4:17169577-17169596 | MS.gene88385:intron | 5.0% |
| !! | TATAATGAATAATAATAATA+TGG | - | chr2.4:17166723-17166742 | None:intergenic | 5.0% |
| !!! | ATAGTTTTTTTTTAAAATAA+CGG | - | chr2.4:17168952-17168971 | None:intergenic | 5.0% |
| AGCATATGCAGGTTGCCATC+AGG | - | chr2.4:17169463-17169482 | None:intergenic | 50.0% | |
| AGCCCTTTGATGAAGCTCTC+TGG | + | chr2.4:17168011-17168030 | MS.gene88385:intron | 50.0% | |
| AGGAAATTGCTGGAGCTGGA+TGG | + | chr2.4:17166879-17166898 | MS.gene88385:CDS | 50.0% | |
| CATGCAGAAAAGAGGGACCA+TGG | - | chr2.4:17167476-17167495 | None:intergenic | 50.0% | |
| CCATTCAGGAATAGCAGCAG+AGG | - | chr2.4:17169623-17169642 | None:intergenic | 50.0% | |
| CCCACGCATAACCAGAAAAC+TGG | - | chr2.4:17169679-17169698 | None:intergenic | 50.0% | |
| CCTCTGCTGCTATTCCTGAA+TGG | + | chr2.4:17169620-17169639 | MS.gene88385:intron | 50.0% | |
| GAAAATACGACGGCTCATGG+CGG | + | chr2.4:17168063-17168082 | MS.gene88385:CDS | 50.0% | |
| GAAAATGTGTCTCACGGCCA+AGG | + | chr2.4:17168085-17168104 | MS.gene88385:CDS | 50.0% | |
| GAGGCTCAACTGCATAGCAT+AGG | - | chr2.4:17170587-17170606 | None:intergenic | 50.0% | |
| GCTCCAGAGAGCTTCATCAA+AGG | - | chr2.4:17168017-17168036 | None:intergenic | 50.0% | |
| GCTGGAGCTGGATGGTATTA+AGG | + | chr2.4:17166887-17166906 | MS.gene88385:CDS | 50.0% | |
| GTGGCTATGAAAGTGACCCA+TGG | + | chr2.4:17167456-17167475 | MS.gene88385:CDS | 50.0% | |
| TCCATTGACAGCCACATCCA+AGG | - | chr2.4:17166808-17166827 | None:intergenic | 50.0% | |
| TGCTGTAGTAGGATCAGAGG+TGG | + | chr2.4:17166666-17166685 | MS.gene88385:CDS | 50.0% | |
| TGGATGTGGCTGTCAATGGA+GGG | + | chr2.4:17166808-17166827 | MS.gene88385:CDS | 50.0% | |
| TTGGATGTGGCTGTCAATGG+AGG | + | chr2.4:17166807-17166826 | MS.gene88385:CDS | 50.0% | |
| TTGGCAGGCAATGTCATTGG+AGG | + | chr2.4:17167939-17167958 | MS.gene88385:intron | 50.0% | |
| ! | AGCGATTCTGGTGAAGGTGT+CGG | + | chr2.4:17167416-17167435 | MS.gene88385:intron | 50.0% |
| ! | AGGTGGACAAGCTTTGTGAC+AGG | + | chr2.4:17166683-17166702 | MS.gene88385:CDS | 50.0% |
| ! | GCATGGCTGATGGGAGTTTT+TGG | + | chr2.4:17170310-17170329 | MS.gene88385:intron | 50.0% |
| ! | GGTGGACAAGCTTTGTGACA+GGG | + | chr2.4:17166684-17166703 | MS.gene88385:CDS | 50.0% |
| !! | TTCAAAGCTGTTGGTGGTGC+TGG | + | chr2.4:17170083-17170102 | MS.gene88385:CDS | 50.0% |
| !!! | GCCAGTTTTCTGGTTATGCG+TGG | + | chr2.4:17169675-17169694 | MS.gene88385:CDS | 50.0% |
| CGGCCAAGGTTGCGATTTGA+CGG | + | chr2.4:17168099-17168118 | MS.gene88385:CDS | 55.0% | |
| GCCTTGGATGTGGCTGTCAA+TGG | + | chr2.4:17166804-17166823 | MS.gene88385:CDS | 55.0% | |
| GCTCTCTGTCTTCATCGAGC+TGG | + | chr2.4:17170676-17170695 | MS.gene88385:intron | 55.0% | |
| ! | GGGTTGGCAGGCAATGTCAT+TGG | + | chr2.4:17167936-17167955 | MS.gene88385:intron | 55.0% |
| ! | GTCATGCTTGAAGGGTTGGC+AGG | + | chr2.4:17167924-17167943 | MS.gene88385:intron | 55.0% |
| ! | GTCGGCGGAGAGGAGTTTTA+CGG | + | chr2.4:17167434-17167453 | MS.gene88385:CDS | 55.0% |
| !! | GATTCTGGTGAAGGTGTCGG+CGG | + | chr2.4:17167419-17167438 | MS.gene88385:CDS | 55.0% |
| !! | GCTGACTTCCATTTCTGGCC+AGG | + | chr2.4:17169543-17169562 | MS.gene88385:CDS | 55.0% |
| !!! | ACTATGGTTTTGGCTGGCGG+TGG | + | chr2.4:17168967-17168986 | MS.gene88385:intron | 55.0% |
| !!! | CTATGGTTTTGGCTGGCGGT+GGG | + | chr2.4:17168968-17168987 | MS.gene88385:intron | 55.0% |
| GGCGGTCATGCTTGAAGGGT+TGG | + | chr2.4:17167920-17167939 | MS.gene88385:intron | 60.0% | |
| GGCTGTCAATGGAGGGACCA+CGG | + | chr2.4:17166815-17166834 | MS.gene88385:CDS | 60.0% | |
| ! | GGCGGAGAGGAGTTTTACGG+TGG | + | chr2.4:17167437-17167456 | MS.gene88385:CDS | 60.0% |
| !! | GCAGGTGTTGGCCTTGGATG+TGG | + | chr2.4:17166794-17166813 | MS.gene88385:intron | 60.0% |
| !! | TGGTGAAGGTGTCGGCGGAG+AGG | + | chr2.4:17167424-17167443 | MS.gene88385:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 17166637 | 17170835 | 17166637 | ID=MS.gene88385 |
| chr2.4 | mRNA | 17166637 | 17170835 | 17166637 | ID=MS.gene88385.t1;Parent=MS.gene88385 |
| chr2.4 | exon | 17166637 | 17166705 | 17166637 | ID=MS.gene88385.t1.exon1;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17166637 | 17166705 | 17166637 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17166798 | 17166944 | 17166798 | ID=MS.gene88385.t1.exon2;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17166798 | 17166944 | 17166798 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17167196 | 17167248 | 17167196 | ID=MS.gene88385.t1.exon3;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17167196 | 17167248 | 17167196 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17167418 | 17167477 | 17167418 | ID=MS.gene88385.t1.exon4;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17167418 | 17167477 | 17167418 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17168026 | 17168120 | 17168026 | ID=MS.gene88385.t1.exon5;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17168026 | 17168120 | 17168026 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17168283 | 17168345 | 17168283 | ID=MS.gene88385.t1.exon6;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17168283 | 17168345 | 17168283 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17168615 | 17168728 | 17168615 | ID=MS.gene88385.t1.exon7;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17168615 | 17168728 | 17168615 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17169434 | 17169564 | 17169434 | ID=MS.gene88385.t1.exon8;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17169434 | 17169564 | 17169434 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17169650 | 17169709 | 17169650 | ID=MS.gene88385.t1.exon9;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17169650 | 17169709 | 17169650 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17169869 | 17169980 | 17169869 | ID=MS.gene88385.t1.exon10;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17169869 | 17169980 | 17169869 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17170073 | 17170182 | 17170073 | ID=MS.gene88385.t1.exon11;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17170073 | 17170182 | 17170073 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| chr2.4 | exon | 17170746 | 17170835 | 17170746 | ID=MS.gene88385.t1.exon12;Parent=MS.gene88385.t1 |
| chr2.4 | CDS | 17170746 | 17170835 | 17170746 | ID=cds.MS.gene88385.t1;Parent=MS.gene88385.t1 |
| Gene Sequence |
| Protein sequence |
