AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88914

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88914.t1 MTR_1g098460 94.318 352 16 3 1 348 1 352 4.62e-154 437
MS.gene88914.t1 MTR_6g037610 56.432 241 81 4 128 352 171 403 9.57e-48 166
MS.gene88914.t1 MTR_7g020980 43.827 162 63 4 108 258 11 155 1.27e-34 125
MS.gene88914.t1 MTR_8g092460 52.713 129 52 3 124 248 132 255 6.24e-34 127
MS.gene88914.t1 MTR_3g095190 48.087 183 65 4 83 238 106 285 2.28e-32 124
MS.gene88914.t1 MTR_7g021010 62.500 88 32 1 109 196 24 110 5.36e-32 119
MS.gene88914.t1 MTR_7g021010 75.385 65 16 0 132 196 7 71 4.51e-30 112
MS.gene88914.t1 MTR_2g105380 42.484 153 74 3 98 239 78 227 5.77e-30 118
MS.gene88914.t1 MTR_3g098580 62.281 114 39 1 83 196 26 135 1.75e-29 114
MS.gene88914.t1 MTR_2g435590 42.484 153 77 2 60 201 8 160 8.27e-29 112
MS.gene88914.t1 MTR_4g086160 46.512 129 63 2 137 260 96 223 9.83e-29 111
MS.gene88914.t1 MTR_4g086165 78.689 61 13 0 133 193 78 138 1.18e-28 110
MS.gene88914.t1 MTR_8g022820 51.961 102 39 1 97 198 94 185 1.73e-28 114
MS.gene88914.t1 MTR_8g022820 51.961 102 39 1 97 198 94 185 1.73e-28 114
MS.gene88914.t1 MTR_8g022820 71.642 67 19 0 132 198 118 184 2.22e-28 114
MS.gene88914.t1 MTR_4g086190 84.211 57 9 0 137 193 96 152 4.49e-28 110
MS.gene88914.t1 MTR_4g086220 84.211 57 9 0 137 193 96 152 5.91e-28 109
MS.gene88914.t1 MTR_1g087920 44.915 118 54 1 132 249 72 178 2.28e-27 109
MS.gene88914.t1 MTR_2g078680 54.639 97 37 1 136 232 30 119 2.55e-25 102
MS.gene88914.t1 MTR_8g006825 56.818 88 36 2 135 221 94 180 4.92e-25 101
MS.gene88914.t1 MTR_5g085100 54.444 90 40 1 105 193 13 102 1.91e-24 101
MS.gene88914.t1 MTR_4g078710 53.409 88 36 1 106 193 2 84 8.20e-24 98.2
MS.gene88914.t1 MTR_4g100380 72.059 68 18 1 135 201 143 210 8.47e-24 99.4
MS.gene88914.t1 MTR_2g014340 58.025 81 31 1 124 201 6 86 2.33e-23 96.3
MS.gene88914.t1 MTR_8g006840 66.176 68 22 1 130 196 118 185 2.74e-23 96.3
MS.gene88914.t1 MTR_3g053690 72.581 62 17 0 136 197 26 87 2.90e-23 96.7
MS.gene88914.t1 MTR_8g006815 69.355 62 18 1 136 196 95 156 3.00e-23 96.3
MS.gene88914.t1 MTR_4g088005 58.904 73 29 1 127 198 47 119 3.67e-23 93.6
MS.gene88914.t1 MTR_1g074310 44.167 120 63 3 127 242 11 130 4.20e-23 94.0
MS.gene88914.t1 MTR_4g100420 68.657 67 20 1 134 199 154 220 5.03e-23 97.8
MS.gene88914.t1 MTR_6g033255 51.389 144 59 4 117 257 2 137 5.05e-23 95.9
MS.gene88914.t1 MTR_2g015050 49.550 111 46 3 90 193 84 191 6.25e-23 97.1
MS.gene88914.t1 MTR_1g028560 66.667 66 18 1 135 196 113 178 6.98e-23 98.2
MS.gene88914.t1 MTR_4g100450 69.231 65 19 1 133 196 150 214 7.42e-23 97.4
MS.gene88914.t1 MTR_5g009620 68.966 58 18 0 135 192 110 167 2.26e-22 96.3
MS.gene88914.t1 MTR_5g085070 70.690 58 17 0 136 193 50 107 2.27e-22 95.9
MS.gene88914.t1 MTR_4g054740 43.651 126 69 2 72 196 33 157 2.50e-22 94.7
MS.gene88914.t1 MTR_1g048610 63.235 68 24 1 130 196 82 149 3.00e-22 94.4
MS.gene88914.t1 MTR_2g438180 67.692 65 20 1 131 194 8 72 3.02e-22 91.3
MS.gene88914.t1 MTR_2g015040 65.672 67 21 2 134 198 60 126 3.62e-22 92.0
MS.gene88914.t1 MTR_7g081815 66.667 63 20 1 135 196 59 121 3.97e-22 93.2
MS.gene88914.t1 MTR_7g081805 66.667 63 20 1 135 196 59 121 6.67e-22 92.8
MS.gene88914.t1 MTR_7g081795 66.667 63 20 1 135 196 58 120 6.99e-22 92.4
MS.gene88914.t1 MTR_2g089170 64.179 67 23 1 134 200 62 127 7.08e-22 92.0
MS.gene88914.t1 MTR_1g070070 59.740 77 30 1 118 193 2 78 7.63e-22 90.9
MS.gene88914.t1 MTR_1g090290 45.714 105 56 1 90 193 66 170 7.88e-22 92.0
MS.gene88914.t1 MTR_3g090760 59.420 69 23 1 135 198 111 179 1.25e-21 94.7
MS.gene88914.t1 MTR_4g054360 69.841 63 18 1 135 196 122 184 1.70e-21 92.8
MS.gene88914.t1 MTR_3g106290 68.333 60 19 0 136 195 7 66 1.94e-21 90.9
MS.gene88914.t1 MTR_4g008860 64.516 62 22 0 134 195 5 66 3.85e-21 90.1
MS.gene88914.t1 MTR_1g090170 50.526 95 46 1 121 215 136 229 3.99e-21 92.8
MS.gene88914.t1 MTR_2g103700 64.516 62 22 0 135 196 5 66 4.56e-21 89.4
MS.gene88914.t1 MTR_1g090170 50.526 95 46 1 121 215 223 316 6.71e-21 93.2
MS.gene88914.t1 MTR_5g062700 67.797 59 19 0 135 193 171 229 7.39e-21 92.8
MS.gene88914.t1 MTR_8g099215 53.659 82 36 1 135 216 105 184 8.16e-21 92.0
MS.gene88914.t1 MTR_6g088405 65.517 58 20 0 137 194 44 101 8.69e-21 89.7
MS.gene88914.t1 MTR_3g074130 66.102 59 20 0 135 193 148 206 1.24e-20 91.7
MS.gene88914.t1 MTR_8g069360 70.175 57 17 0 136 192 43 99 1.34e-20 92.8
MS.gene88914.t1 MTR_4g010640 66.102 59 20 0 135 193 5 63 1.65e-20 89.0
MS.gene88914.t1 MTR_8g102800 67.241 58 19 0 137 194 37 94 1.77e-20 89.4
MS.gene88914.t1 MTR_4g114570 51.220 82 38 1 135 216 5 84 1.88e-20 89.0
MS.gene88914.t1 MTR_7g096810 49.000 100 50 1 136 234 12 111 3.26e-20 85.9
MS.gene88914.t1 MTR_4g054860 65.625 64 21 1 134 196 128 191 3.59e-20 89.4
MS.gene88914.t1 MTR_2g014300 67.213 61 20 0 133 193 11 71 3.74e-20 87.0
MS.gene88914.t1 MTR_2g101340 41.667 108 53 1 87 194 1 98 4.69e-20 87.4
MS.gene88914.t1 MTR_3g110205 65.517 58 20 0 137 194 43 100 5.05e-20 87.0
MS.gene88914.t1 MTR_7g096700 67.742 62 19 1 133 193 16 77 5.34e-20 85.5
MS.gene88914.t1 MTR_8g090350 64.407 59 21 0 135 193 111 169 5.73e-20 89.0
MS.gene88914.t1 MTR_5g082950 68.421 57 18 0 136 192 65 121 7.83e-20 89.4
MS.gene88914.t1 MTR_7g046260 55.405 74 30 1 137 207 61 134 9.50e-20 87.4
MS.gene88914.t1 MTR_7g117690 46.753 77 41 0 120 196 11 87 9.94e-20 85.9
MS.gene88914.t1 MTR_8g006410 55.263 76 32 1 137 212 52 125 1.10e-19 86.7
MS.gene88914.t1 MTR_3g102100 62.069 58 22 0 137 194 45 102 1.15e-19 85.5
MS.gene88914.t1 MTR_2g090235 63.333 60 22 0 135 194 216 275 1.17e-19 90.1
MS.gene88914.t1 MTR_5g016750 61.667 60 23 0 135 194 23 82 1.32e-19 85.5
MS.gene88914.t1 MTR_1g074230 67.797 59 18 1 136 193 18 76 1.33e-19 84.3
MS.gene88914.t1 MTR_7g096750 70.000 60 17 1 136 194 19 78 1.35e-19 84.3
MS.gene88914.t1 MTR_8g085960 49.412 85 36 2 125 202 8 92 1.62e-19 86.7
MS.gene88914.t1 MTR_0939s0010 63.333 60 22 0 134 193 62 121 2.58e-19 85.1
MS.gene88914.t1 MTR_4g100650 63.793 58 21 0 137 194 74 131 3.18e-19 86.3
MS.gene88914.t1 MTR_7g092190 68.421 57 18 0 137 193 30 86 4.34e-19 86.7
MS.gene88914.t1 MTR_1g069985 52.941 85 35 2 109 192 51 131 4.77e-19 85.1
MS.gene88914.t1 MTR_4g119270 55.072 69 27 1 128 192 40 108 5.08e-19 87.4
MS.gene88914.t1 MTR_1g019110 62.069 58 22 0 137 194 44 101 5.49e-19 84.0
MS.gene88914.t1 MTR_5g012910 53.333 75 34 1 120 194 12 85 6.21e-19 84.0
MS.gene88914.t1 MTR_6g012970 62.712 59 22 0 134 192 35 93 6.73e-19 87.8
MS.gene88914.t1 MTR_7g011630 62.712 59 22 0 134 192 39 97 6.93e-19 87.8
MS.gene88914.t1 MTR_1g070000 53.947 76 34 1 118 192 65 140 9.08e-19 84.3
MS.gene88914.t1 MTR_6g466130 46.392 97 44 2 122 212 45 139 9.41e-19 84.3
MS.gene88914.t1 MTR_8g013860 63.158 57 21 0 137 193 47 103 1.01e-18 84.0
MS.gene88914.t1 MTR_7g085810 56.061 66 29 0 136 201 29 94 1.42e-18 84.7
MS.gene88914.t1 MTR_5g075570 60.656 61 24 0 133 193 120 180 1.57e-18 85.1
MS.gene88914.t1 MTR_8g032610 50.633 79 37 1 116 192 4 82 1.73e-18 85.1
MS.gene88914.t1 MTR_4g035430 58.333 60 25 0 137 196 32 91 1.86e-18 83.6
MS.gene88914.t1 MTR_5g032820 66.667 57 19 0 136 192 45 101 2.03e-18 85.9
MS.gene88914.t1 MTR_1g070020 66.102 59 19 1 135 192 68 126 2.10e-18 83.2
MS.gene88914.t1 MTR_1g070015 53.947 76 34 1 118 192 65 140 2.46e-18 83.2
MS.gene88914.t1 MTR_1g014800 32.121 165 100 4 110 267 7 166 3.00e-18 82.8
MS.gene88914.t1 MTR_7g084370 66.667 57 19 0 136 192 41 97 3.42e-18 84.0
MS.gene88914.t1 MTR_6g029180 54.286 70 32 0 132 201 28 97 4.31e-18 84.3
MS.gene88914.t1 MTR_8g027465 53.030 66 31 0 131 196 33 98 4.65e-18 81.3
MS.gene88914.t1 MTR_5g083340 62.712 59 22 0 136 194 84 142 5.74e-18 84.7
MS.gene88914.t1 MTR_1g014780 42.857 98 50 2 102 199 8 99 6.94e-18 82.0
MS.gene88914.t1 MTR_2g019750 36.000 150 72 5 126 261 31 170 8.11e-18 83.2
MS.gene88914.t1 MTR_1g074250 63.333 60 20 1 136 193 18 77 8.72e-18 79.3
MS.gene88914.t1 MTR_1g014860 47.436 78 40 1 122 199 7 83 8.93e-18 81.6
MS.gene88914.t1 MTR_1g014820 47.561 82 42 1 118 199 8 88 8.94e-18 82.4
MS.gene88914.t1 MTR_1g069960 68.750 64 19 1 136 198 26 89 1.15e-17 79.3
MS.gene88914.t1 MTR_1g070035 61.667 60 22 1 134 192 74 133 1.83e-17 80.9
MS.gene88914.t1 MTR_6g465690 40.517 116 59 3 103 212 25 136 2.95e-17 80.9
MS.gene88914.t1 MTR_2g043050 38.182 110 58 3 137 240 19 124 3.00e-17 80.1
MS.gene88914.t1 MTR_1g040430 49.541 109 49 3 90 193 61 168 4.55e-17 79.0
MS.gene88914.t1 MTR_1g070045 55.263 76 32 2 118 192 48 122 5.13e-17 78.2
MS.gene88914.t1 MTR_1g101600 55.882 68 25 1 137 199 41 108 6.97e-17 78.6
MS.gene88914.t1 MTR_6g466020 51.351 74 34 1 137 210 43 114 7.33e-17 78.2
MS.gene88914.t1 MTR_2g043030 38.596 114 57 3 125 232 4 110 7.39e-17 78.6
MS.gene88914.t1 MTR_5g083330 56.452 62 27 0 133 194 31 92 8.47e-17 80.1
MS.gene88914.t1 MTR_6g465510 58.333 60 25 0 137 196 33 92 9.54e-17 78.6
MS.gene88914.t1 MTR_6g088425 48.624 109 38 3 123 215 19 125 1.03e-16 79.0
MS.gene88914.t1 MTR_6g466000 40.367 109 57 2 113 215 27 133 1.24e-16 78.6
MS.gene88914.t1 MTR_4g111915 57.627 59 25 0 135 193 51 109 1.30e-16 76.3
MS.gene88914.t1 MTR_4g112490 56.667 60 26 0 134 193 50 109 1.71e-16 77.4
MS.gene88914.t1 MTR_6g465460 49.367 79 38 1 137 215 54 130 1.86e-16 79.0
MS.gene88914.t1 MTR_4g082345 45.161 93 32 3 134 225 45 119 1.95e-16 79.3
MS.gene88914.t1 MTR_6g465430 48.101 79 39 1 137 215 54 130 2.40e-16 78.2
MS.gene88914.t1 MTR_6g465530 58.621 58 24 0 137 194 33 90 2.54e-16 77.0
MS.gene88914.t1 MTR_5g008590 54.321 81 35 2 137 217 11 89 2.85e-16 76.6
MS.gene88914.t1 MTR_6g465850 53.521 71 28 1 137 202 63 133 3.38e-16 78.2
MS.gene88914.t1 MTR_2g016730 59.649 57 23 0 136 192 22 78 3.83e-16 79.0
MS.gene88914.t1 MTR_1g069940 67.188 64 20 1 134 196 92 155 3.91e-16 77.4
MS.gene88914.t1 MTR_7g096830 50.000 94 45 2 105 196 65 158 5.94e-16 76.6
MS.gene88914.t1 MTR_3g105510 37.755 98 50 2 135 232 35 121 8.30e-16 76.6
MS.gene88914.t1 MTR_1g097190 53.125 64 29 1 130 192 16 79 9.25e-16 73.9
MS.gene88914.t1 MTR_1g069945 68.750 64 19 1 134 196 98 161 1.20e-15 76.3
MS.gene88914.t1 MTR_6g465450 55.000 60 27 0 137 196 54 113 1.22e-15 75.9
MS.gene88914.t1 MTR_8g023680 62.500 48 18 0 136 183 115 162 1.62e-15 77.4
MS.gene88914.t1 MTR_2g043040 50.820 61 30 0 137 197 19 79 2.11e-15 75.1
MS.gene88914.t1 MTR_1g023170 65.517 58 20 0 137 194 40 97 2.12e-15 75.9
MS.gene88914.t1 MTR_7g096780 64.706 68 23 1 130 196 78 145 2.39e-15 75.1
MS.gene88914.t1 MTR_6g465420 46.835 79 40 1 137 215 54 130 3.75e-15 75.1
MS.gene88914.t1 MTR_3g112440 67.241 58 19 0 137 194 39 96 4.13e-15 74.3
MS.gene88914.t1 MTR_7g028925 43.333 90 47 2 110 199 2 87 4.84e-15 70.5
MS.gene88914.t1 MTR_1g012470 47.748 111 51 4 133 239 3 110 5.00e-15 73.2
MS.gene88914.t1 MTR_3g017420 58.824 51 21 0 144 194 2 52 5.16e-15 69.7
MS.gene88914.t1 MTR_8g023700 62.963 54 16 1 134 183 110 163 5.98e-15 75.5
MS.gene88914.t1 MTR_2g043020 44.737 76 39 1 125 197 4 79 7.79e-15 72.8
MS.gene88914.t1 MTR_7g070220 58.730 63 19 1 137 192 78 140 1.09e-14 75.5
MS.gene88914.t1 MTR_1g110970 52.459 61 25 1 136 192 96 156 1.18e-14 74.7
MS.gene88914.t1 MTR_1g105400 43.750 80 41 1 136 211 114 193 1.34e-14 74.7
MS.gene88914.t1 MTR_1g006660 66.667 57 19 0 137 193 47 103 1.90e-14 72.8
MS.gene88914.t1 MTR_5g008540 50.000 58 29 0 139 196 26 83 1.93e-14 68.9
MS.gene88914.t1 MTR_4g102670 46.914 81 40 2 132 212 10 87 2.30e-14 70.9
MS.gene88914.t1 MTR_5g085125 56.897 58 25 0 136 193 15 72 2.40e-14 70.9
MS.gene88914.t1 MTR_1g043350 47.573 103 48 3 95 192 37 138 3.07e-14 71.6
MS.gene88914.t1 MTR_5g008470 51.724 58 28 0 139 196 77 134 4.81e-14 70.1
MS.gene88914.t1 MTR_3g105480 38.298 94 47 2 139 232 33 115 6.39e-14 70.9
MS.gene88914.t1 MTR_3g107380 66.102 59 20 0 135 193 6 64 1.40e-13 69.3
MS.gene88914.t1 MTR_1g074370 61.538 65 24 1 133 196 69 133 6.47e-13 67.8
MS.gene88914.t1 MTR_5g008790 50.000 62 29 1 135 194 16 77 7.18e-13 66.2
MS.gene88914.t1 MTR_2g085015 43.617 94 38 4 133 211 43 136 9.26e-13 67.4
MS.gene88914.t1 MTR_5g057810 68.293 41 13 0 136 176 87 127 1.76e-12 67.8
MS.gene88914.t1 MTR_5g057647 68.293 41 13 0 136 176 87 127 1.76e-12 67.8
MS.gene88914.t1 MTR_5g009410 55.000 80 36 0 133 212 113 192 2.58e-12 67.4
MS.gene88914.t1 MTR_5g010940 33.613 119 64 3 137 242 54 170 5.07e-12 65.5
MS.gene88914.t1 MTR_5g010910 33.613 119 64 3 137 242 49 165 6.79e-12 64.7
MS.gene88914.t1 MTR_5g008550 43.210 81 44 1 137 217 21 99 8.28e-12 63.9
MS.gene88914.t1 MTR_5g010930 42.353 85 41 2 137 215 49 131 1.12e-11 64.3
MS.gene88914.t1 MTR_1g093600 55.357 56 23 1 136 191 63 116 1.81e-11 65.1
MS.gene88914.t1 MTR_4g009260 47.059 102 48 3 101 202 45 140 2.63e-11 62.8
MS.gene88914.t1 MTR_5g058470 52.308 65 30 1 130 193 89 153 4.72e-11 63.5
MS.gene88914.t1 MTR_3g072610 44.444 81 43 1 134 212 22 102 4.92e-11 62.4
MS.gene88914.t1 MTR_5g053920 51.724 58 26 1 136 193 65 120 4.95e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88914.t1 AT5G61890 51.333 150 55 3 98 242 51 187 1.75e-36 132
MS.gene88914.t1 AT2G33710 70.130 77 23 0 120 196 53 129 3.99e-33 123
MS.gene88914.t1 AT2G33710 70.130 77 23 0 120 196 53 129 5.75e-33 123
MS.gene88914.t1 AT5G13330 71.951 82 18 1 133 214 35 111 1.09e-32 121
MS.gene88914.t1 AT5G50080 52.703 148 49 3 128 275 77 203 2.08e-30 116
MS.gene88914.t1 AT5G50080 51.282 156 55 3 120 275 60 194 2.09e-30 115
MS.gene88914.t1 AT2G47520 47.244 127 58 3 124 241 35 161 9.15e-30 112
MS.gene88914.t1 AT1G43160 62.037 108 35 1 132 233 56 163 8.94e-29 110
MS.gene88914.t1 AT3G16770 60.465 86 31 1 112 194 51 136 1.82e-28 111
MS.gene88914.t1 AT5G64750 86.207 58 8 0 144 201 192 249 2.49e-28 114
MS.gene88914.t1 AT5G07310 62.857 105 27 3 133 231 88 186 1.59e-27 109
MS.gene88914.t1 AT3G15210 50.000 118 45 3 123 226 11 128 8.20e-27 106
MS.gene88914.t1 AT5G47220 68.919 74 22 1 129 201 109 182 4.32e-25 102
MS.gene88914.t1 AT1G72360 66.667 66 22 0 136 201 24 89 5.80e-25 101
MS.gene88914.t1 AT4G17500 56.989 93 39 1 110 201 121 213 8.75e-25 102
MS.gene88914.t1 AT1G72360 66.667 66 22 0 136 201 75 140 9.14e-25 102
MS.gene88914.t1 AT1G72360 66.667 66 22 0 136 201 73 138 1.02e-24 101
MS.gene88914.t1 AT5G47230 61.628 86 28 2 121 201 136 221 1.10e-24 102
MS.gene88914.t1 AT1G03800 58.750 80 29 1 114 193 34 109 2.68e-24 100
MS.gene88914.t1 AT4G11140 60.759 79 30 1 135 213 85 162 3.65e-24 100
MS.gene88914.t1 AT1G28370 64.384 73 22 1 121 193 46 114 3.85e-24 98.6
MS.gene88914.t1 AT1G28370 64.384 73 22 1 121 193 8 76 5.84e-24 97.1
MS.gene88914.t1 AT2G22200 55.000 80 36 0 130 209 64 143 3.15e-23 97.8
MS.gene88914.t1 AT4G27950 35.593 177 92 5 33 192 2 173 3.80e-23 99.0
MS.gene88914.t1 AT5G44210 73.684 57 15 0 137 193 33 89 4.19e-23 95.9
MS.gene88914.t1 AT1G71450 55.556 81 34 2 137 217 24 102 1.02e-22 94.4
MS.gene88914.t1 AT4G17490 67.164 67 21 1 131 196 131 197 1.28e-22 96.3
MS.gene88914.t1 AT5G51190 68.852 61 18 1 134 193 69 129 1.52e-22 94.7
MS.gene88914.t1 AT5G53290 52.632 95 43 1 100 192 86 180 2.20e-22 97.1
MS.gene88914.t1 AT3G20310 47.619 105 41 2 136 236 26 120 2.54e-22 94.7
MS.gene88914.t1 AT5G61600 62.319 69 25 1 135 202 86 154 2.81e-22 94.7
MS.gene88914.t1 AT2G44840 69.355 62 18 1 136 196 91 152 4.98e-22 93.6
MS.gene88914.t1 AT5G07580 48.598 107 49 3 112 217 88 189 5.25e-22 92.8
MS.gene88914.t1 AT3G57600 63.235 68 25 0 136 203 27 94 8.13e-22 94.0
MS.gene88914.t1 AT4G06746 61.290 62 24 0 135 196 34 95 8.60e-22 90.9
MS.gene88914.t1 AT4G28140 41.964 112 64 1 135 246 141 251 1.00e-21 94.0
MS.gene88914.t1 AT3G23230 72.881 59 15 1 136 193 19 77 1.25e-21 90.1
MS.gene88914.t1 AT5G65130 64.516 62 22 0 135 196 109 170 1.30e-21 93.6
MS.gene88914.t1 AT3G61630 46.667 105 51 2 88 192 61 160 1.30e-21 94.4
MS.gene88914.t1 AT5G65130 64.516 62 22 0 135 196 111 172 1.33e-21 93.6
MS.gene88914.t1 AT1G50640 72.414 58 16 0 136 193 27 84 1.59e-21 92.0
MS.gene88914.t1 AT4G16750 45.833 96 52 0 99 194 2 97 1.67e-21 90.9
MS.gene88914.t1 AT1G15360 65.574 61 21 0 135 195 5 65 1.72e-21 91.3
MS.gene88914.t1 AT1G15360 65.574 61 21 0 135 195 5 65 1.72e-21 91.3
MS.gene88914.t1 AT1G22190 65.000 60 21 0 135 194 81 140 2.43e-21 92.4
MS.gene88914.t1 AT4G36900 48.387 93 40 1 102 194 3 87 3.07e-21 90.5
MS.gene88914.t1 AT5G25190 53.659 82 37 1 136 217 7 87 4.15e-21 89.7
MS.gene88914.t1 AT3G50260 57.353 68 29 0 132 199 16 83 6.64e-21 88.6
MS.gene88914.t1 AT1G36060 66.102 59 20 0 135 193 141 199 6.78e-21 92.0
MS.gene88914.t1 AT1G28360 65.625 64 22 0 130 193 5 68 7.06e-21 89.4
MS.gene88914.t1 AT4G23750 55.952 84 31 2 109 192 100 177 7.41e-21 92.4
MS.gene88914.t1 AT4G23750 55.952 84 31 2 109 192 100 177 7.41e-21 92.4
MS.gene88914.t1 AT4G39780 63.934 61 22 0 134 194 90 150 8.15e-21 91.3
MS.gene88914.t1 AT5G43410 71.186 59 16 1 136 193 14 72 1.34e-20 87.0
MS.gene88914.t1 AT1G78080 66.102 59 20 0 135 193 150 208 1.37e-20 91.7
MS.gene88914.t1 AT4G32800 53.333 75 33 1 122 194 2 76 1.48e-20 89.4
MS.gene88914.t1 AT5G67190 56.338 71 31 0 130 200 14 84 1.73e-20 88.2
MS.gene88914.t1 AT2G35700 65.517 58 20 0 137 194 45 102 1.83e-20 88.6
MS.gene88914.t1 AT4G13620 68.333 60 19 0 135 194 230 289 2.02e-20 92.0
MS.gene88914.t1 AT3G60490 50.000 84 30 1 123 194 45 128 2.86e-20 89.4
MS.gene88914.t1 AT4G34410 84.211 57 9 0 137 193 136 192 2.94e-20 89.7
MS.gene88914.t1 AT2G20880 65.000 60 21 0 135 194 185 244 2.94e-20 90.9
MS.gene88914.t1 AT5G25810 47.826 92 47 1 103 194 3 93 3.64e-20 88.2
MS.gene88914.t1 AT2G31230 53.012 83 37 2 116 196 64 146 5.58e-20 88.2
MS.gene88914.t1 AT2G25820 65.517 58 20 0 137 194 26 83 5.95e-20 87.8
MS.gene88914.t1 AT3G16280 65.517 58 20 0 137 194 61 118 7.30e-20 87.8
MS.gene88914.t1 AT5G11590 50.000 92 43 2 103 194 20 108 7.82e-20 87.8
MS.gene88914.t1 AT2G46310 66.667 57 19 0 136 192 98 154 8.91e-20 88.6
MS.gene88914.t1 AT3G16280 65.517 58 20 0 137 194 79 136 9.27e-20 87.8
MS.gene88914.t1 AT1G19210 54.688 64 29 0 136 199 11 74 9.44e-20 86.3
MS.gene88914.t1 AT5G25390 62.712 59 22 0 135 193 5 63 1.09e-19 86.3
MS.gene88914.t1 AT1G01250 43.750 96 48 1 101 196 15 104 1.63e-19 85.9
MS.gene88914.t1 AT4G25470 51.899 79 36 1 137 215 51 127 1.84e-19 86.3
MS.gene88914.t1 AT2G23340 62.069 58 22 0 137 194 28 85 1.86e-19 85.1
MS.gene88914.t1 AT5G19790 52.564 78 33 1 124 197 5 82 1.88e-19 87.0
MS.gene88914.t1 AT2G44940 59.375 64 26 0 131 194 94 157 2.04e-19 87.8
MS.gene88914.t1 AT1G12980 57.692 78 31 1 136 211 56 133 2.29e-19 88.2
MS.gene88914.t1 AT1G75490 49.412 85 35 2 137 221 42 118 2.76e-19 85.5
MS.gene88914.t1 AT3G14230 41.892 148 80 2 72 213 58 205 3.69e-19 88.2
MS.gene88914.t1 AT3G11020 65.000 60 21 0 137 196 78 137 3.85e-19 87.4
MS.gene88914.t1 AT4G25490 53.947 76 33 1 137 212 48 121 3.85e-19 85.1
MS.gene88914.t1 AT5G13910 53.521 71 33 0 122 192 5 75 5.74e-19 84.7
MS.gene88914.t1 AT1G46768 59.016 61 25 0 134 194 28 88 6.13e-19 83.2
MS.gene88914.t1 AT1G46768 59.016 61 25 0 134 194 28 88 6.13e-19 83.2
MS.gene88914.t1 AT4G25480 52.632 76 34 1 137 212 51 124 6.22e-19 84.7
MS.gene88914.t1 AT1G46768 59.016 61 25 0 134 194 28 88 7.30e-19 82.4
MS.gene88914.t1 AT1G74930 53.125 64 30 0 136 199 20 83 1.02e-18 83.6
MS.gene88914.t1 AT2G40340 53.247 77 36 0 137 213 14 90 1.57e-18 85.1
MS.gene88914.t1 AT2G40340 53.247 77 36 0 137 213 14 90 1.57e-18 85.1
MS.gene88914.t1 AT2G40340 53.247 77 36 0 137 213 14 90 1.57e-18 85.1
MS.gene88914.t1 AT4G18450 64.516 62 20 2 133 192 106 167 1.65e-18 85.1
MS.gene88914.t1 AT3G23240 68.421 57 17 1 137 192 82 138 2.16e-18 83.2
MS.gene88914.t1 AT1G21910 59.649 57 23 0 137 193 50 106 2.74e-18 83.2
MS.gene88914.t1 AT5G51990 44.144 111 50 3 115 215 22 130 3.26e-18 82.8
MS.gene88914.t1 AT3G14230 48.673 113 53 1 106 213 92 204 3.31e-18 85.5
MS.gene88914.t1 AT3G14230 52.941 102 43 1 117 213 108 209 3.61e-18 85.1
MS.gene88914.t1 AT2G36450 52.381 84 35 2 128 210 6 85 3.93e-18 81.6
MS.gene88914.t1 AT1G53910 55.882 102 40 3 128 224 114 215 4.04e-18 84.7
MS.gene88914.t1 AT1G53910 55.882 102 40 3 128 224 114 215 4.04e-18 84.7
MS.gene88914.t1 AT1G24590 66.667 57 19 0 136 192 57 113 4.07e-18 84.3
MS.gene88914.t1 AT5G18450 62.500 56 21 0 137 192 34 89 4.08e-18 84.3
MS.gene88914.t1 AT1G53910 55.882 102 40 3 128 224 112 213 4.16e-18 84.7
MS.gene88914.t1 AT5G21960 42.553 94 51 1 136 226 6 99 4.59e-18 82.4
MS.gene88914.t1 AT5G05410 63.333 60 22 0 134 193 76 135 4.83e-18 84.0
MS.gene88914.t1 AT2G40340 53.247 77 36 0 137 213 79 155 5.10e-18 84.3
MS.gene88914.t1 AT2G40340 53.247 77 36 0 137 213 72 148 5.26e-18 84.0
MS.gene88914.t1 AT2G40340 53.247 77 36 0 137 213 72 148 6.00e-18 84.3
MS.gene88914.t1 AT5G05410 63.333 60 22 0 134 193 76 135 6.28e-18 84.0
MS.gene88914.t1 AT5G18560 50.575 87 34 1 115 192 24 110 7.20e-18 84.0
MS.gene88914.t1 AT1G53170 50.980 102 46 1 125 226 19 116 7.92e-18 80.9
MS.gene88914.t1 AT5G25390 61.017 59 20 1 135 193 5 60 1.24e-17 80.5
MS.gene88914.t1 AT4G31060 36.923 130 64 5 135 246 25 154 9.93e-17 77.8
MS.gene88914.t1 AT1G68550 47.312 93 40 2 134 226 110 193 1.00e-16 80.5
MS.gene88914.t1 AT1G68550 47.312 93 40 2 134 226 110 193 1.00e-16 80.5
MS.gene88914.t1 AT1G22985 54.054 74 31 1 122 192 60 133 2.99e-16 75.9
MS.gene88914.t1 AT1G28160 61.404 57 22 0 136 192 38 94 3.06e-16 77.8
MS.gene88914.t1 AT1G12890 51.316 76 35 1 127 200 11 86 5.36e-16 76.6
MS.gene88914.t1 AT5G61590 58.442 77 29 2 120 193 88 164 1.03e-15 75.5
MS.gene88914.t1 AT2G40350 57.895 57 24 0 137 193 74 130 1.32e-15 73.9
MS.gene88914.t1 AT5G67000 53.333 60 28 0 132 191 116 175 1.55e-15 74.3
MS.gene88914.t1 AT2G40350 57.895 57 24 0 137 193 67 123 1.55e-15 73.6
MS.gene88914.t1 AT1G71130 53.623 69 27 1 129 192 71 139 2.62e-15 73.2
MS.gene88914.t1 AT3G23220 72.881 59 15 1 136 193 13 71 4.04e-15 72.0
MS.gene88914.t1 AT1G77200 65.517 58 20 0 137 194 43 100 4.26e-15 74.3
MS.gene88914.t1 AT1G22810 43.333 90 46 2 128 215 5 91 7.02e-15 71.6
MS.gene88914.t1 AT5G11190 69.492 59 18 0 135 193 5 63 7.46e-15 72.8
MS.gene88914.t1 AT1G06160 68.852 61 18 1 137 196 82 142 1.41e-14 73.2
MS.gene88914.t1 AT1G63030 48.684 76 37 1 137 212 30 103 1.45e-14 71.6
MS.gene88914.t1 AT1G63030 48.684 76 37 1 137 212 30 103 1.45e-14 71.6
MS.gene88914.t1 AT1G33760 57.333 75 28 1 137 211 20 90 2.17e-14 71.2
MS.gene88914.t1 AT1G04370 71.186 59 16 1 136 193 19 77 2.94e-14 69.3
MS.gene88914.t1 AT2G40220 67.797 59 19 0 134 192 52 110 4.73e-14 72.8
MS.gene88914.t1 AT2G38340 56.164 73 24 2 136 200 69 141 1.15e-13 70.5
MS.gene88914.t1 AT1G12610 51.724 58 28 0 137 194 30 87 2.74e-13 68.6
MS.gene88914.t1 AT1G64380 64.516 62 22 0 132 193 131 192 9.32e-13 68.9
MS.gene88914.t1 AT1G77640 46.429 84 44 1 133 216 39 121 9.57e-13 67.8
MS.gene88914.t1 AT1G49120 32.787 122 77 3 115 232 63 183 2.16e-12 67.8
MS.gene88914.t1 AT3G25890 35.714 112 49 2 90 183 71 177 4.52e-12 66.6
MS.gene88914.t1 AT3G25890 35.714 112 49 2 90 183 71 177 4.52e-12 66.6
MS.gene88914.t1 AT1G71520 53.846 52 23 1 129 179 5 56 7.16e-12 63.2
MS.gene88914.t1 AT1G68840 54.386 57 24 1 136 192 64 118 1.44e-11 65.5
MS.gene88914.t1 AT1G68840 54.386 57 24 1 136 192 64 118 1.44e-11 65.5
MS.gene88914.t1 AT3G25730 35.789 95 59 1 136 230 61 153 2.32e-11 64.7
MS.gene88914.t1 AT1G44830 57.143 63 26 1 133 194 31 93 2.63e-11 62.8

Find 85 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACTTGGACCCACTCATTT+TGG 0.138004 1.1:+70843901 None:intergenic
TTCTTCTAGTGCTGCTCTTT+TGG 0.154366 1.1:-70843802 MS.gene88914:CDS
GTTTCACTTCCCCTGTTTCC+TGG 0.257031 1.1:-70842217 MS.gene88914:CDS
ACCATGTTGAAGGTGGAAAA+TGG 0.277816 1.1:+70842128 None:intergenic
GACAGAGACCATGGGGAAAA+TGG 0.284163 1.1:-70842711 MS.gene88914:CDS
GGAAAAGTTGGTCTTGTTGC+TGG 0.317802 1.1:+70842544 None:intergenic
CCATTTGCTGACCAGGAAAC+AGG 0.347326 1.1:+70842206 None:intergenic
CACACAAAGCAGCAAGAGTA+TGG 0.363163 1.1:-70842669 MS.gene88914:CDS
GATGAGTTTCCCTGTGAAAA+AGG 0.372591 1.1:+70843666 None:intergenic
GAAAATAACCACTTCCTTGT+TGG 0.377793 1.1:+70843880 None:intergenic
CCTGTTTCCTGGTCAGCAAA+TGG 0.381899 1.1:-70842206 MS.gene88914:CDS
AGCGCCGACTCAGCATGGAT+TGG 0.393202 1.1:-70843931 MS.gene88914:CDS
AACCACTTCCTTGTTGGACT+TGG 0.393801 1.1:+70843886 None:intergenic
GGCTGCATTTGTGGTGGTGC+AGG 0.397775 1.1:+70842475 None:intergenic
GAAGAAGGTGGAGGAGGAGG+AGG 0.399412 1.1:+70842088 None:intergenic
TCTCAGCTTCTGAAAGGTTC+CGG 0.413668 1.1:-70842388 MS.gene88914:CDS
GGGACAAAACCTGACATCAT+AGG 0.430327 1.1:+70843858 None:intergenic
GCGCCGACTCAGCATGGATT+GGG 0.436462 1.1:-70843930 MS.gene88914:CDS
TCACAGGGAAACTCATCATC+AGG 0.441888 1.1:-70843660 MS.gene88914:intron
GTATCTTCTTCTTCTCTCTC+CGG 0.445049 1.1:+70842744 None:intergenic
CTAGAAGAAGGTGGAGGAGG+AGG 0.459277 1.1:+70842085 None:intergenic
ACAGAGACCATGGGGAAAAT+GGG 0.460862 1.1:-70842710 MS.gene88914:CDS
GGTGGCAATGTCTTGTCCTA+TGG 0.461540 1.1:-70843958 None:intergenic
TGTTGTTGTGGCTGCATTTG+TGG 0.461629 1.1:+70842466 None:intergenic
CCACCGCGAGAGTGATCTTC+CGG 0.461779 1.1:+70842169 None:intergenic
GCAGGTGAATAATGTGTTGC+TGG 0.469601 1.1:+70842493 None:intergenic
GACTCAGCATGGATTGGGCC+AGG 0.471357 1.1:-70843925 MS.gene88914:CDS
ACCTTCAACATGGTCAGATA+CGG 0.474756 1.1:-70842119 MS.gene88914:CDS
TTGGGGTCTAGTTCATGGGT+TGG 0.474786 1.1:-70843783 MS.gene88914:CDS
CAACTAGAAGAAGGTGGAGG+AGG 0.477472 1.1:+70842082 None:intergenic
GAAGTATTCGCCGGAAAAGT+TGG 0.481650 1.1:+70842532 None:intergenic
CACAAAAGAGTGCGTGAAGA+TGG 0.482942 1.1:-70843759 MS.gene88914:CDS
TTCAAGTCCTTGAAAATCAC+CGG 0.484498 1.1:+70842369 None:intergenic
GAGCTTTGAAACTGAACAAA+CGG 0.494758 1.1:+70842442 None:intergenic
CGCGGTGGAGGATACAGTGG+TGG 0.508961 1.1:-70842154 MS.gene88914:CDS
CCCGTATCTGACCATGTTGA+AGG 0.514114 1.1:+70842118 None:intergenic
CATAATGATGATGCTGTTGG+TGG 0.514955 1.1:-70843732 MS.gene88914:CDS
GAATTAGAACTAGAAGAGAC+AGG 0.519069 1.1:+70843837 None:intergenic
ACAACAAATGAAGAAGAAAC+CGG 0.524400 1.1:-70842763 MS.gene88914:CDS
GAAGATCACTCTCGCGGTGG+AGG 0.525037 1.1:-70842166 MS.gene88914:CDS
CATACTCTTGCTGCTTTGTG+TGG 0.530957 1.1:+70842670 None:intergenic
TTCCATTATCAACTAGAAGA+AGG 0.532961 1.1:+70842073 None:intergenic
AAGATGACAAAGAAAGTGAC+GGG 0.533187 1.1:+70842284 None:intergenic
CCATGTTGAAGGTGGAAAAT+GGG 0.537545 1.1:+70842129 None:intergenic
ATGGTTCTACGAATCACAAA+TGG 0.539406 1.1:-70842344 MS.gene88914:CDS
TGAAACAGAGGATAATTGAC+TGG 0.543402 1.1:+70842234 None:intergenic
TGAACAAACGGTTGTTGTTG+TGG 0.546090 1.1:+70842454 None:intergenic
CATTTGCTGACCAGGAAACA+GGG 0.547205 1.1:+70842207 None:intergenic
GAGAGTGATCTTCCGGTGGC+CGG 0.551531 1.1:+70842176 None:intergenic
TGGCCCAATCCATGCTGAGT+CGG 0.555533 1.1:+70843927 None:intergenic
ACAGAGGATAATTGACTGGA+AGG 0.556441 1.1:+70842238 None:intergenic
GAGGAGTGAGACAGAGACCA+TGG 0.562124 1.1:-70842720 MS.gene88914:CDS
CAATATTCTCAGCTTCTGAA+AGG 0.563770 1.1:-70842394 MS.gene88914:CDS
AGGAGTGAGACAGAGACCAT+GGG 0.567176 1.1:-70842719 MS.gene88914:CDS
GAGAGAAGAAGAAGATACAG+AGG 0.569683 1.1:-70842739 MS.gene88914:CDS
GTCCAAGTCCAACAAGGAAG+TGG 0.570055 1.1:-70843888 MS.gene88914:CDS
CTTCATAATGATGATGCTGT+TGG 0.570479 1.1:-70843735 MS.gene88914:CDS
GCGGTGGAGGATACAGTGGT+GGG 0.574526 1.1:-70842153 MS.gene88914:CDS
CCTTCAACATGGTCAGATAC+GGG 0.588325 1.1:-70842118 MS.gene88914:CDS
AAAGCAGCAAGAGTATGGCT+TGG 0.593615 1.1:-70842664 MS.gene88914:CDS
GAAGATGTTGAAGTATTCGC+CGG 0.597867 1.1:+70842523 None:intergenic
GTTTCAGCGCCGACTCAGCA+TGG 0.598763 1.1:-70843936 MS.gene88914:CDS
TGGGCCAGGCCCAAAATGAG+TGG 0.604705 1.1:-70843911 MS.gene88914:CDS
GACAAAGAAAGTGACGGGGA+AGG 0.606725 1.1:+70842289 None:intergenic
TGAGTCGGCGCTGAAACCAT+AGG 0.611832 1.1:+70843942 None:intergenic
TGTTGTGGCTGCATTTGTGG+TGG 0.615280 1.1:+70842469 None:intergenic
GAAGATGACAAAGAAAGTGA+CGG 0.620377 1.1:+70842283 None:intergenic
GAAGCTGCATTAAGATTCAG+AGG 0.624554 1.1:-70842601 MS.gene88914:CDS
CATTATCAACTAGAAGAAGG+TGG 0.636159 1.1:+70842076 None:intergenic
GGGCCAGGCCCAAAATGAGT+GGG 0.638742 1.1:-70843910 MS.gene88914:CDS
GTATCTGACCATGTTGAAGG+TGG 0.639414 1.1:+70842121 None:intergenic
TATCAACTAGAAGAAGGTGG+AGG 0.643850 1.1:+70842079 None:intergenic
CCGGAAGATCACTCTCGCGG+TGG 0.644261 1.1:-70842169 MS.gene88914:CDS
GAGTGGGTCCAAGTCCAACA+AGG 0.647051 1.1:-70843894 MS.gene88914:CDS
ATTTGCTGACCAGGAAACAG+GGG 0.667657 1.1:+70842208 None:intergenic
CCGCGAGAGTGATCTTCCGG+TGG 0.670643 1.1:+70842172 None:intergenic
TCTCGCGGTGGAGGATACAG+TGG 0.671150 1.1:-70842157 MS.gene88914:CDS
AATTAGAACTAGAAGAGACA+GGG 0.674858 1.1:+70843838 None:intergenic
GGAGTGAGACAGAGACCATG+GGG 0.677063 1.1:-70842718 MS.gene88914:CDS
CCACCGGAAGATCACTCTCG+CGG 0.679535 1.1:-70842172 MS.gene88914:CDS
GTTCTACGAATCACAAATGG+CGG 0.709789 1.1:-70842341 MS.gene88914:CDS
AAACAGGGGAAGTGAAACAG+AGG 0.718203 1.1:+70842222 None:intergenic
TCAACATGGTCAGATACGGG+TGG 0.732934 1.1:-70842115 MS.gene88914:CDS
AGATGACAAAGAAAGTGACG+GGG 0.743363 1.1:+70842285 None:intergenic
GCACTAGAAGAATACATACG+AGG 0.768609 1.1:+70843813 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTAGTGA+AGG - chr1.1:70842700-70842719 MS.gene88914:CDS 10.0%
!! AAAAAAAAAAAAAAGTCAAC+TGG + chr1.1:70842861-70842880 None:intergenic 15.0%
!! AAAAGTTTAACAAAAAATGA+AGG + chr1.1:70842483-70842502 None:intergenic 15.0%
!! AAATTAAATAGAAGATCATA+AGG + chr1.1:70843173-70843192 None:intergenic 15.0%
!!! ATTCAACTTGTTTTTTAATA+TGG - chr1.1:70842532-70842551 MS.gene88914:CDS 15.0%
!!! TTGTTTTTTAATATGGTAAA+TGG - chr1.1:70842539-70842558 MS.gene88914:CDS 15.0%
!!! AAAACAAGTTGAATGAATTT+TGG + chr1.1:70842526-70842545 None:intergenic 20.0%
!!! TACTTGTTGGTTTATTAAAA+TGG + chr1.1:70842758-70842777 None:intergenic 20.0%
! AAAAGGTTTAGTAGTTAACA+AGG - chr1.1:70842730-70842749 MS.gene88914:CDS 25.0%
! AACAAGTGAAACTAAATAGT+CGG - chr1.1:70842953-70842972 MS.gene88914:intron 25.0%
! AGTAACATTTGTCTATAGAA+AGG - chr1.1:70842774-70842793 MS.gene88914:CDS 25.0%
! CTATTTCAACTTATATTGCA+TGG - chr1.1:70842913-70842932 MS.gene88914:intron 25.0%
! GAACAATTTGAACTAAACAA+TGG + chr1.1:70843134-70843153 None:intergenic 25.0%
! GTAACATTTGTCTATAGAAA+GGG - chr1.1:70842775-70842794 MS.gene88914:CDS 25.0%
! TTAGTGAAGGATCAATAAAA+AGG - chr1.1:70842713-70842732 MS.gene88914:CDS 25.0%
! TTTGGTCATGTGAAATTTAA+GGG + chr1.1:70842595-70842614 None:intergenic 25.0%
!! ACATTAGATTTGGTTGATAT+AGG + chr1.1:70842816-70842835 None:intergenic 25.0%
!! GTACTTAGAATAACATGTTT+TGG + chr1.1:70842613-70842632 None:intergenic 25.0%
!! TATAGACAAATGTTACTTGT+TGG + chr1.1:70842771-70842790 None:intergenic 25.0%
!! TGAAATAGTTTTTCCAAGAT+GGG + chr1.1:70842901-70842920 None:intergenic 25.0%
!! TTGAAATAGTTTTTCCAAGA+TGG + chr1.1:70842902-70842921 None:intergenic 25.0%
!! TTTTGGTCATGTGAAATTTA+AGG + chr1.1:70842596-70842615 None:intergenic 25.0%
!!! AATAGTCTCTAAAACAGTAT+TGG - chr1.1:70843098-70843117 MS.gene88914:intron 25.0%
!!! TTTAGATTACCTTTTTCACA+GGG - chr1.1:70842357-70842376 MS.gene88914:CDS 25.0%
!!! TTTTAGATTACCTTTTTCAC+AGG - chr1.1:70842356-70842375 MS.gene88914:CDS 25.0%
AATTAGAACTAGAAGAGACA+GGG + chr1.1:70842197-70842216 None:intergenic 30.0%
ACAACAAATGAAGAAGAAAC+CGG - chr1.1:70843269-70843288 MS.gene88914:intron 30.0%
ACATATTATATTGCTCCTTC+TGG + chr1.1:70842647-70842666 None:intergenic 30.0%
ATTGTGTATGTAGACGTAAA+AGG + chr1.1:70842420-70842439 None:intergenic 30.0%
GTACTTTGCAACATTAGATT+TGG + chr1.1:70842826-70842845 None:intergenic 30.0%
TTGGTCATGTGAAATTTAAG+GGG + chr1.1:70842594-70842613 None:intergenic 30.0%
!! ATTTTCAAGGACTTGAACAA+TGG - chr1.1:70843669-70843688 MS.gene88914:CDS 30.0%
AAGATGACAAAGAAAGTGAC+GGG + chr1.1:70843751-70843770 None:intergenic 35.0%
AGTGCTTAGCCTATCAATAT+CGG + chr1.1:70843002-70843021 None:intergenic 35.0%
ATAGGCTAAGCACTTTCATT+CGG - chr1.1:70843008-70843027 MS.gene88914:intron 35.0%
CAATATTCTCAGCTTCTGAA+AGG - chr1.1:70843638-70843657 MS.gene88914:intron 35.0%
GAAAATAACCACTTCCTTGT+TGG + chr1.1:70842155-70842174 None:intergenic 35.0%
GAAGATGACAAAGAAAGTGA+CGG + chr1.1:70843752-70843771 None:intergenic 35.0%
GAATTAGAACTAGAAGAGAC+AGG + chr1.1:70842198-70842217 None:intergenic 35.0%
TACAAATCTTGATCCCATCT+TGG - chr1.1:70842885-70842904 MS.gene88914:intron 35.0%
TGAAACAGAGGATAATTGAC+TGG + chr1.1:70843801-70843820 None:intergenic 35.0%
TTCAAGTCCTTGAAAATCAC+CGG + chr1.1:70843666-70843685 None:intergenic 35.0%
TTGCTAATGCCGATATTGAT+AGG - chr1.1:70842990-70843009 MS.gene88914:intron 35.0%
! ATGGTTCTACGAATCACAAA+TGG - chr1.1:70843688-70843707 MS.gene88914:CDS 35.0%
! CTTCATAATGATGATGCTGT+TGG - chr1.1:70842297-70842316 MS.gene88914:CDS 35.0%
! TTGTTGCTGGAACATTTTCA+GGG + chr1.1:70843478-70843497 None:intergenic 35.0%
!! GAGCTTTGAAACTGAACAAA+CGG + chr1.1:70843593-70843612 None:intergenic 35.0%
!! GGTTATTTTCCTATGATGTC+AGG - chr1.1:70842165-70842184 MS.gene88914:CDS 35.0%
ACAGAGGATAATTGACTGGA+AGG + chr1.1:70843797-70843816 None:intergenic 40.0%
ACCATGTTGAAGGTGGAAAA+TGG + chr1.1:70843907-70843926 None:intergenic 40.0%
ACCTTCAACATGGTCAGATA+CGG - chr1.1:70843913-70843932 MS.gene88914:CDS 40.0%
AGATGACAAAGAAAGTGACG+GGG + chr1.1:70843750-70843769 None:intergenic 40.0%
CAAATCCAAAATCTCGCTGT+GGG - chr1.1:70843034-70843053 MS.gene88914:intron 40.0%
CCATGTTGAAGGTGGAAAAT+GGG + chr1.1:70843906-70843925 None:intergenic 40.0%
GAAGCTGCATTAAGATTCAG+AGG - chr1.1:70843431-70843450 MS.gene88914:intron 40.0%
GAGAGAAGAAGAAGATACAG+AGG - chr1.1:70843293-70843312 MS.gene88914:intron 40.0%
GATGAGTTTCCCTGTGAAAA+AGG + chr1.1:70842369-70842388 None:intergenic 40.0%
GCACTAGAAGAATACATACG+AGG + chr1.1:70842222-70842241 None:intergenic 40.0%
GTACAACACTAATGTCCAGA+AGG - chr1.1:70842629-70842648 MS.gene88914:CDS 40.0%
GTATCTTCTTCTTCTCTCTC+CGG + chr1.1:70843291-70843310 None:intergenic 40.0%
GTTCTACGAATCACAAATGG+CGG - chr1.1:70843691-70843710 MS.gene88914:CDS 40.0%
TAGGCTAAGCACTTTCATTC+GGG - chr1.1:70843009-70843028 MS.gene88914:intron 40.0%
TATCGGCATTAGCAATCAAG+CGG + chr1.1:70842985-70843004 None:intergenic 40.0%
TCAAATCCAAAATCTCGCTG+TGG - chr1.1:70843033-70843052 MS.gene88914:intron 40.0%
! AAAAACTCCATTTGCTGACC+AGG + chr1.1:70843836-70843855 None:intergenic 40.0%
! AAAGGTTCCGGTGATTTTCA+AGG - chr1.1:70843656-70843675 MS.gene88914:intron 40.0%
! AGCAACAAGACCAACTTTTC+CGG - chr1.1:70843490-70843509 MS.gene88914:intron 40.0%
! CATAATGATGATGCTGTTGG+TGG - chr1.1:70842300-70842319 MS.gene88914:CDS 40.0%
! CTTGTTGCTGGAACATTTTC+AGG + chr1.1:70843479-70843498 None:intergenic 40.0%
! GAAGATGTTGAAGTATTCGC+CGG + chr1.1:70843512-70843531 None:intergenic 40.0%
! GTCAGCAAATGGAGTTTTTC+CGG - chr1.1:70843837-70843856 MS.gene88914:CDS 40.0%
! TGAACAAACGGTTGTTGTTG+TGG + chr1.1:70843581-70843600 None:intergenic 40.0%
!! TCTTCTAGTGCTGCTCTTTT+GGG - chr1.1:70842231-70842250 MS.gene88914:CDS 40.0%
!! TTCTTCTAGTGCTGCTCTTT+TGG - chr1.1:70842230-70842249 MS.gene88914:CDS 40.0%
!!! TCTTTTGGGGTCTAGTTCAT+GGG - chr1.1:70842245-70842264 MS.gene88914:CDS 40.0%
AAACAGGGGAAGTGAAACAG+AGG + chr1.1:70843813-70843832 None:intergenic 45.0%
AACCACTTCCTTGTTGGACT+TGG + chr1.1:70842149-70842168 None:intergenic 45.0%
ACAGAGACCATGGGGAAAAT+GGG - chr1.1:70843322-70843341 MS.gene88914:intron 45.0%
CACACAAAGCAGCAAGAGTA+TGG - chr1.1:70843363-70843382 MS.gene88914:intron 45.0%
CCTTCAACATGGTCAGATAC+GGG - chr1.1:70843914-70843933 MS.gene88914:CDS 45.0%
GCAGGTGAATAATGTGTTGC+TGG + chr1.1:70843542-70843561 None:intergenic 45.0%
GGGACAAAACCTGACATCAT+AGG + chr1.1:70842177-70842196 None:intergenic 45.0%
GTATCTGACCATGTTGAAGG+TGG + chr1.1:70843914-70843933 None:intergenic 45.0%
TCACAGGGAAACTCATCATC+AGG - chr1.1:70842372-70842391 MS.gene88914:CDS 45.0%
TGTTGTTGTGGCTGCATTTG+TGG + chr1.1:70843569-70843588 None:intergenic 45.0%
! AAAGCAGCAAGAGTATGGCT+TGG - chr1.1:70843368-70843387 MS.gene88914:intron 45.0%
! ATTTGCTGACCAGGAAACAG+GGG + chr1.1:70843827-70843846 None:intergenic 45.0%
! CACAAAAGAGTGCGTGAAGA+TGG - chr1.1:70842273-70842292 MS.gene88914:CDS 45.0%
! CATTTGCTGACCAGGAAACA+GGG + chr1.1:70843828-70843847 None:intergenic 45.0%
! CCCATTTTCCACCTTCAACA+TGG - chr1.1:70843903-70843922 MS.gene88914:CDS 45.0%
! GAAGTATTCGCCGGAAAAGT+TGG + chr1.1:70843503-70843522 None:intergenic 45.0%
! GACTTGGACCCACTCATTTT+GGG + chr1.1:70842133-70842152 None:intergenic 45.0%
! TCTCAGCTTCTGAAAGGTTC+CGG - chr1.1:70843644-70843663 MS.gene88914:intron 45.0%
!! CATACTCTTGCTGCTTTGTG+TGG + chr1.1:70843365-70843384 None:intergenic 45.0%
!! CTTCTAGTGCTGCTCTTTTG+GGG - chr1.1:70842232-70842251 MS.gene88914:CDS 45.0%
!! GGAAAAGTTGGTCTTGTTGC+TGG + chr1.1:70843491-70843510 None:intergenic 45.0%
!!! CTCTTTTGGGGTCTAGTTCA+TGG - chr1.1:70842244-70842263 MS.gene88914:CDS 45.0%
!!! ATTTAATTTATTTGAAAAAA+CGG - chr1.1:70843184-70843203 MS.gene88914:intron 5.0%
AGGAGTGAGACAGAGACCAT+GGG - chr1.1:70843313-70843332 MS.gene88914:intron 50.0%
CAACTAGAAGAAGGTGGAGG+AGG + chr1.1:70843953-70843972 None:intergenic 50.0%
CCCGTATCTGACCATGTTGA+AGG + chr1.1:70843917-70843936 None:intergenic 50.0%
CCTGTTTCCTGGTCAGCAAA+TGG - chr1.1:70843826-70843845 MS.gene88914:CDS 50.0%
GACAGAGACCATGGGGAAAA+TGG - chr1.1:70843321-70843340 MS.gene88914:intron 50.0%
GTCCAAGTCCAACAAGGAAG+TGG - chr1.1:70842144-70842163 MS.gene88914:CDS 50.0%
GTTTCACTTCCCCTGTTTCC+TGG - chr1.1:70843815-70843834 MS.gene88914:CDS 50.0%
TCAACATGGTCAGATACGGG+TGG - chr1.1:70843917-70843936 MS.gene88914:CDS 50.0%
TGTTGTGGCTGCATTTGTGG+TGG + chr1.1:70843566-70843585 None:intergenic 50.0%
! AATGGAGTTTTTCCGGCCAC+CGG - chr1.1:70843844-70843863 MS.gene88914:CDS 50.0%
! CCATTTGCTGACCAGGAAAC+AGG + chr1.1:70843829-70843848 None:intergenic 50.0%
! GACAAAGAAAGTGACGGGGA+AGG + chr1.1:70843746-70843765 None:intergenic 50.0%
! GGACTTGGACCCACTCATTT+TGG + chr1.1:70842134-70842153 None:intergenic 50.0%
! TTGGGGTCTAGTTCATGGGT+TGG - chr1.1:70842249-70842268 MS.gene88914:CDS 50.0%
CTAGAAGAAGGTGGAGGAGG+AGG + chr1.1:70843950-70843969 None:intergenic 55.0%
GAGGAGTGAGACAGAGACCA+TGG - chr1.1:70843312-70843331 MS.gene88914:intron 55.0%
GAGTGGGTCCAAGTCCAACA+AGG - chr1.1:70842138-70842157 MS.gene88914:CDS 55.0%
GGAGTGAGACAGAGACCATG+GGG - chr1.1:70843314-70843333 MS.gene88914:intron 55.0%
TGGCCCAATCCATGCTGAGT+CGG + chr1.1:70842108-70842127 None:intergenic 55.0%
! GCTCACCCACAGCGAGATTT+TGG + chr1.1:70843042-70843061 None:intergenic 55.0%
! TCTGCTGCCCATTTTCCCCA+TGG + chr1.1:70843332-70843351 None:intergenic 55.0%
! TGAGTCGGCGCTGAAACCAT+AGG + chr1.1:70842093-70842112 None:intergenic 55.0%
CCACCGCGAGAGTGATCTTC+CGG + chr1.1:70843866-70843885 None:intergenic 60.0%
CCACCGGAAGATCACTCTCG+CGG - chr1.1:70843860-70843879 MS.gene88914:CDS 60.0%
GAAGAAGGTGGAGGAGGAGG+AGG + chr1.1:70843947-70843966 None:intergenic 60.0%
GAAGATCACTCTCGCGGTGG+AGG - chr1.1:70843866-70843885 MS.gene88914:CDS 60.0%
GAGAGTGATCTTCCGGTGGC+CGG + chr1.1:70843859-70843878 None:intergenic 60.0%
GCGGTGGAGGATACAGTGGT+GGG - chr1.1:70843879-70843898 MS.gene88914:CDS 60.0%
GGGCCAGGCCCAAAATGAGT+GGG - chr1.1:70842122-70842141 MS.gene88914:CDS 60.0%
TCTCGCGGTGGAGGATACAG+TGG - chr1.1:70843875-70843894 MS.gene88914:CDS 60.0%
TGGGCCAGGCCCAAAATGAG+TGG - chr1.1:70842121-70842140 MS.gene88914:CDS 60.0%
! GGACCCACTCATTTTGGGCC+TGG + chr1.1:70842128-70842147 None:intergenic 60.0%
! GGCTGCATTTGTGGTGGTGC+AGG + chr1.1:70843560-70843579 None:intergenic 60.0%
!! AGCGCCGACTCAGCATGGAT+TGG - chr1.1:70842101-70842120 MS.gene88914:CDS 60.0%
!! GACTCAGCATGGATTGGGCC+AGG - chr1.1:70842107-70842126 MS.gene88914:CDS 60.0%
!! GCGCCGACTCAGCATGGATT+GGG - chr1.1:70842102-70842121 MS.gene88914:CDS 60.0%
!! GTTTCAGCGCCGACTCAGCA+TGG - chr1.1:70842096-70842115 MS.gene88914:CDS 60.0%
CCGCGAGAGTGATCTTCCGG+TGG + chr1.1:70843863-70843882 None:intergenic 65.0%
CCGGAAGATCACTCTCGCGG+TGG - chr1.1:70843863-70843882 MS.gene88914:CDS 65.0%
CGCGGTGGAGGATACAGTGG+TGG - chr1.1:70843878-70843897 MS.gene88914:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 70842081 70843973 70842081 ID=MS.gene88914
chr1.1 mRNA 70842081 70843973 70842081 ID=MS.gene88914.t1;Parent=MS.gene88914
chr1.1 exon 70843661 70843973 70843661 ID=MS.gene88914.t1.exon1;Parent=MS.gene88914.t1
chr1.1 CDS 70843661 70843973 70843661 ID=cds.MS.gene88914.t1;Parent=MS.gene88914.t1
chr1.1 exon 70842081 70842841 70842081 ID=MS.gene88914.t1.exon2;Parent=MS.gene88914.t1
chr1.1 CDS 70842081 70842841 70842081 ID=cds.MS.gene88914.t1;Parent=MS.gene88914.t1
Gene Sequence

>MS.gene88914

ATGTCTTGTCCTATGGTTTCAGCGCCGACTCAGCATGGATTGGGCCAGGCCCAAAATGAGTGGGTCCAAGTCCAACAAGGAAGTGGTTATTTTCCTATGATGTCAGGTTTTGTCCCTGTCTCTTCTAGTTCTAATTCTCCTCGTATGTATTCTTCTAGTGCTGCTCTTTTGGGGTCTAGTTCATGGGTTGGACACAAAAGAGTGCGTGAAGATGGTCTTCATAATGATGATGCTGTTGGTGGTTCTTCTCAACAAGATATGAGAAATATTGCTGATTTTAGATTACCTTTTTCACAGGGAAACTCATCATCAGGTACTATTGCTTTCATTTTCTCTCCTTTTACGTCTACATACACAATTGTATTATCATCTTCATCATAAATAATTGACATAAGAATTCCTTCATTTTTTGTTAAACTTTTTTTTCTAAATTTAATGTTGACCAAAATTCATTCAACTTGTTTTTTAATATGGTAAATGGAACAATCTATGAAAAGTACTATTATTAATCCCCTTAAATTTCACATGACCAAAACATGTTATTCTAAGTACAACACTAATGTCCAGAAGGAGCAATATAATATGTGTGTTGAGATGCTAAAGAACAGTCAAGAAAAAGTTTTTTTTTTTTTTTAGTGAAGGATCAATAAAAAGGTTTAGTAGTTAACAAGGAACCATTTTAATAAACCAACAAGTAACATTTGTCTATAGAAAGGGTGCAAGCAACATTAACCTATATCAACCAAATCTAATGTTGCAAAGTACACATAAACATAACCAGTTGACTTTTTTTTTTTTTTTTTTTACAAATCTTGATCCCATCTTGGAAAAACTATTTCAACTTATATTGCATGGATATTAAAATTTTCATTAACAAGTGAAACTAAATAGTCGGTAAGATCCGCTTGATTGCTAATGCCGATATTGATAGGCTAAGCACTTTCATTCGGGTTCAAATCCAAAATCTCGCTGTGGGTGAGCTTTGACAAAAAACAAAAATGAAACTTAATAATATACAATAGTCTCTAAAACAGTATTGGAAATGAAAAACCATTGTTTAGTTCAAATTGTTCAATATATATAATTGTACCTTATGATCTTCTATTTAATTTATTTGAAAAAACGGTAACAGAAGCAACAACAACTTCAAGTACAAGCAATGTAACACAATCGAGTGAAGCAGCATCGACAACAAATGAAGAAGAAACCGGAGAGAGAAGAAGAAGATACAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCAGAAATTCGAGATCCACACAAAGCAGCAAGAGTATGGCTTGGAACATTTGAAACTGCAGAAGCTGCAGCAAGAGCTTACGATGAAGCTGCATTAAGATTCAGAGGAAACAGAGCAAAACTCAATTTCCCTGAAAATGTTCCAGCAACAAGACCAACTTTTCCGGCGAATACTTCAACATCTTCTGTTTCTCCAGCAACACATTATTCACCTGCACCACCACAAATGCAGCCACAACAACAACCGTTTGTTCAGTTTCAAAGCTCTTCTGATATGTTGAGAGACTATTATCAATATTCTCAGCTTCTGAAAGGTTCCGGTGATTTTCAAGGACTTGAACAATGGTTCTACGAATCACAAATGGCGGCGATACATTCATCTTCATCGATGTTGTCGCCTTCCCCGTCACTTTCTTTGTCATCTTCTACATCTTCAACTGCATTTTCACCTTCCAGTCAATTATCCTCTGTTTCACTTCCCCTGTTTCCTGGTCAGCAAATGGAGTTTTTCCGGCCACCGGAAGATCACTCTCGCGGTGGAGGATACAGTGGTGGGTCCCATTTTCCACCTTCAACATGGTCAGATACGGGTGGTTATCCTCCTCCTCCTCCACCTTCTTCTAGTTGA
Protein sequence

>MS.gene88914.t1

MSCPMVSAPTQHGLGQAQNEWVQVQQGSGYFPMMSGFVPVSSSSNSPRMYSSSAALLGSSSWVGHKRVREDGLHNDDAVGGSSQQDMRNIADFRLPFSQGNSSSEATTTSSTSNVTQSSEAASTTNEEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVPATRPTFPANTSTSSVSPATHYSPAPPQMQPQQQPFVQFQSSSDMLRDYYQYSQLLKGSGDFQGLEQWFYESQMAAIHSSSSMLSPSPSLSLSSSTSSTAFSPSSQLSSVSLPLFPGQQMEFFRPPEDHSRGGGYSGGSHFPPSTWSDTGGYPPPPPPSSS