AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053549


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053549.t1 MTR_4g094010 94.162 531 9 1 12 520 3 533 0.0 1014
MS.gene053549.t1 MTR_4g094050 76.301 519 95 5 25 520 41 554 0.0 792
MS.gene053549.t1 MTR_4g094060 75.192 520 99 5 25 520 41 554 0.0 783
MS.gene053549.t1 MTR_4g054020 72.848 453 92 4 93 519 4 451 0.0 668
MS.gene053549.t1 MTR_4g094090 59.533 514 174 8 30 519 6 509 0.0 593
MS.gene053549.t1 MTR_4g093845 57.443 524 186 8 23 519 26 539 0.0 592
MS.gene053549.t1 MTR_6g066240 52.988 502 194 6 37 505 47 539 1.58e-174 508
MS.gene053549.t1 MTR_4g076970 47.070 529 237 7 26 519 20 540 1.01e-160 473
MS.gene053549.t1 MTR_4g076940 46.667 555 248 9 6 519 35 582 2.36e-152 453
MS.gene053549.t1 MTR_4g076940 46.812 549 244 9 12 519 1 542 1.27e-151 450
MS.gene053549.t1 MTR_4g076900 46.538 520 237 8 35 520 7 519 4.54e-148 440
MS.gene053549.t1 MTR_4g076940 47.461 453 199 6 101 519 2 449 2.87e-126 382
MS.gene053549.t1 MTR_2g095390 35.521 518 291 8 34 520 104 609 1.02e-95 306
MS.gene053549.t1 MTR_7g106880 34.943 435 257 11 53 468 3 430 4.91e-69 232
MS.gene053549.t1 MTR_1g054960 34.725 455 264 13 49 486 17 455 1.81e-68 231
MS.gene053549.t1 MTR_4g094020 59.420 207 49 5 244 446 168 343 2.61e-68 223
MS.gene053549.t1 MTR_7g106880 34.943 435 257 11 53 468 154 581 6.72e-68 232
MS.gene053549.t1 MTR_1g096580 33.265 487 284 17 20 486 51 516 5.10e-64 221
MS.gene053549.t1 MTR_1g115790 32.829 463 269 9 54 486 117 567 5.20e-64 222
MS.gene053549.t1 MTR_1g054935 32.599 454 278 12 53 486 3 448 6.12e-64 218
MS.gene053549.t1 MTR_7g100120 31.293 441 281 6 52 477 120 553 2.49e-63 220
MS.gene053549.t1 MTR_2g079980 33.787 441 261 10 55 486 27 445 2.81e-63 217
MS.gene053549.t1 MTR_1g054935 31.992 472 293 12 35 486 147 610 8.09e-63 219
MS.gene053549.t1 MTR_1g108340 33.051 472 277 11 30 485 66 514 8.52e-63 218
MS.gene053549.t1 MTR_1g108340 33.051 472 277 11 30 485 66 514 1.35e-62 218
MS.gene053549.t1 MTR_5g025470 32.548 467 282 11 35 486 45 493 7.37e-59 206
MS.gene053549.t1 MTR_1g093990 32.988 482 276 17 33 486 55 517 2.53e-57 202
MS.gene053549.t1 MTR_5g096390 33.188 458 276 13 44 486 94 536 3.88e-57 202
MS.gene053549.t1 MTR_8g093840 30.474 443 286 7 57 486 54 487 3.20e-55 196
MS.gene053549.t1 MTR_2g078080 29.184 490 296 10 56 519 47 511 7.82e-55 194
MS.gene053549.t1 MTR_8g059150 31.713 432 263 9 55 476 62 471 2.40e-54 194
MS.gene053549.t1 MTR_8g107450 41.502 253 141 4 54 304 64 311 2.61e-53 193
MS.gene053549.t1 MTR_3g096410 29.555 494 302 11 57 515 56 538 6.35e-52 187
MS.gene053549.t1 MTR_4g116540 28.810 479 288 9 58 506 74 529 1.31e-50 183
MS.gene053549.t1 MTR_2g101090 30.323 465 284 15 51 499 863 1303 1.38e-48 181
MS.gene053549.t1 MTR_2g101090 25.576 434 256 11 102 486 202 617 1.72e-27 117
MS.gene053549.t1 MTR_5g030910 35.691 311 165 8 12 314 25 308 4.13e-48 177
MS.gene053549.t1 MTR_7g098780 27.397 511 317 12 5 485 779 1265 4.25e-46 174
MS.gene053549.t1 MTR_7g098780 26.638 473 302 9 52 486 168 633 2.74e-36 144
MS.gene053549.t1 MTR_8g014360 29.913 458 269 14 51 485 897 1325 7.36e-46 173
MS.gene053549.t1 MTR_8g014360 27.542 472 287 11 58 486 177 636 1.08e-37 149
MS.gene053549.t1 MTR_7g098760 27.545 501 311 12 14 485 823 1300 4.67e-45 171
MS.gene053549.t1 MTR_7g098760 25.053 471 300 11 58 486 161 620 9.29e-32 130
MS.gene053549.t1 MTR_1g099570 29.698 431 272 8 59 486 50 452 6.17e-45 167
MS.gene053549.t1 MTR_3g107870 28.000 450 292 8 49 485 880 1310 9.78e-45 169
MS.gene053549.t1 MTR_3g107870 33.922 283 147 8 58 304 165 443 7.28e-34 137
MS.gene053549.t1 MTR_5g070320 27.176 471 297 7 55 486 165 628 1.04e-44 169
MS.gene053549.t1 MTR_5g070320 27.313 454 272 11 59 486 858 1279 4.96e-40 155
MS.gene053549.t1 MTR_2g102670 27.668 506 316 14 10 485 773 1258 1.04e-44 169
MS.gene053549.t1 MTR_2g102670 24.628 471 284 12 58 486 166 607 9.55e-27 115
MS.gene053549.t1 MTR_7g098320 27.565 497 315 11 14 485 819 1295 1.38e-44 169
MS.gene053549.t1 MTR_7g098320 26.271 472 293 12 58 486 157 616 1.29e-33 136
MS.gene053549.t1 MTR_7g104110 29.130 460 274 14 49 485 865 1295 1.43e-44 169
MS.gene053549.t1 MTR_7g104110 27.061 473 286 13 59 486 178 636 1.95e-37 148
MS.gene053549.t1 MTR_3g463680 27.840 449 292 10 51 486 835 1264 2.67e-44 168
MS.gene053549.t1 MTR_3g463680 27.311 476 288 10 55 486 164 625 3.84e-33 135
MS.gene053549.t1 MTR_2g102660 28.798 441 280 11 59 485 855 1275 3.99e-44 168
MS.gene053549.t1 MTR_2g102660 26.383 470 295 13 58 486 166 625 3.50e-35 141
MS.gene053549.t1 MTR_7g098740 28.024 496 305 13 18 485 790 1261 5.56e-44 167
MS.gene053549.t1 MTR_7g098740 28.846 364 217 9 58 382 161 521 8.10e-34 137
MS.gene053549.t1 MTR_4g011630 28.604 444 277 12 59 485 866 1286 1.29e-43 166
MS.gene053549.t1 MTR_4g011630 27.945 433 250 14 58 440 172 592 2.37e-34 138
MS.gene053549.t1 MTR_1g094660 39.163 263 145 7 37 295 501 752 1.37e-43 166
MS.gene053549.t1 MTR_1g094660 39.163 263 145 7 37 295 501 752 1.87e-43 165
MS.gene053549.t1 MTR_1g050525 28.602 472 296 12 59 510 894 1344 3.47e-43 165
MS.gene053549.t1 MTR_1g050525 26.261 476 286 15 59 486 176 634 1.82e-32 133
MS.gene053549.t1 MTR_7g098750 28.348 448 289 8 51 485 875 1303 3.61e-43 165
MS.gene053549.t1 MTR_7g098750 28.610 367 214 10 58 382 161 521 1.11e-33 136
MS.gene053549.t1 MTR_7g098750 28.348 448 289 8 51 485 875 1303 3.86e-43 165
MS.gene053549.t1 MTR_7g098750 28.610 367 214 10 58 382 161 521 1.03e-33 136
MS.gene053549.t1 MTR_7g098750 28.348 448 289 8 51 485 605 1033 4.18e-43 164
MS.gene053549.t1 MTR_7g098750 29.185 233 150 6 159 382 25 251 6.18e-19 91.3
MS.gene053549.t1 MTR_4g011620 28.175 504 305 15 13 485 799 1276 5.02e-43 164
MS.gene053549.t1 MTR_4g011620 26.458 480 282 16 58 486 160 619 1.49e-33 136
MS.gene053549.t1 MTR_8g014360 30.137 438 254 14 51 465 897 1305 5.35e-43 164
MS.gene053549.t1 MTR_8g014360 27.542 472 287 11 58 486 177 636 9.50e-38 149
MS.gene053549.t1 MTR_2g102640 27.840 449 290 11 51 485 850 1278 1.40e-42 163
MS.gene053549.t1 MTR_2g102640 26.170 470 296 13 58 486 166 625 3.08e-34 138
MS.gene053549.t1 MTR_7g104130 29.128 436 267 13 49 466 873 1284 4.09e-42 162
MS.gene053549.t1 MTR_7g104130 28.375 363 218 8 59 382 184 543 2.01e-36 145
MS.gene053549.t1 MTR_7g104130 29.128 436 267 13 49 466 873 1284 5.03e-42 161
MS.gene053549.t1 MTR_7g104130 28.375 363 218 8 59 382 184 543 2.75e-36 144
MS.gene053549.t1 MTR_7g104150 29.519 437 262 14 49 465 873 1283 8.21e-42 161
MS.gene053549.t1 MTR_7g104150 27.234 470 289 11 59 486 184 642 5.62e-36 143
MS.gene053549.t1 MTR_7g098300 26.559 497 316 11 14 485 823 1295 2.27e-41 159
MS.gene053549.t1 MTR_7g098300 25.847 472 295 11 58 486 161 620 2.06e-33 135
MS.gene053549.t1 MTR_4g011640 27.494 451 289 11 51 485 855 1283 2.46e-41 159
MS.gene053549.t1 MTR_4g011640 27.002 437 249 14 58 440 170 590 1.95e-34 139
MS.gene053549.t1 MTR_1g011650 27.093 454 287 12 51 485 869 1297 3.39e-41 159
MS.gene053549.t1 MTR_1g011650 28.866 485 262 16 59 486 166 624 3.30e-35 141
MS.gene053549.t1 MTR_1g011640 27.218 496 308 16 19 485 803 1274 3.76e-41 159
MS.gene053549.t1 MTR_1g011640 33.574 277 145 7 59 300 154 426 6.84e-31 128
MS.gene053549.t1 MTR_7g101780 38.525 244 143 6 55 295 510 749 8.13e-41 158
MS.gene053549.t1 MTR_1g063920 37.705 244 145 5 55 295 489 728 1.93e-40 156
MS.gene053549.t1 MTR_7g098370 27.232 448 294 8 51 485 833 1261 3.22e-40 156
MS.gene053549.t1 MTR_7g098370 26.737 475 287 15 58 486 161 620 2.20e-33 135
MS.gene053549.t1 MTR_7g098800 27.743 483 305 12 28 485 760 1223 4.65e-40 155
MS.gene053549.t1 MTR_7g098800 32.639 288 156 8 52 304 126 410 4.93e-35 140
MS.gene053549.t1 MTR_5g070320 27.313 454 272 11 59 486 571 992 5.61e-40 155
MS.gene053549.t1 MTR_5g070320 27.246 334 229 7 159 486 16 341 5.78e-28 119
MS.gene053549.t1 MTR_1g492950 29.621 422 261 14 59 465 894 1294 6.55e-40 155
MS.gene053549.t1 MTR_1g492950 26.975 367 218 9 59 382 189 548 6.29e-30 125
MS.gene053549.t1 MTR_5g070320 27.313 454 272 11 59 486 667 1088 7.74e-40 155
MS.gene053549.t1 MTR_5g070320 25.467 428 271 9 99 486 18 437 5.14e-31 128
MS.gene053549.t1 MTR_7g098320 27.254 477 302 11 14 465 819 1275 8.69e-40 155
MS.gene053549.t1 MTR_7g098320 26.271 472 293 12 58 486 157 616 8.05e-34 137
MS.gene053549.t1 MTR_4g123850 28.319 452 280 11 53 485 852 1278 4.44e-39 152
MS.gene053549.t1 MTR_4g123850 27.721 487 291 12 46 486 154 625 6.83e-38 149
MS.gene053549.t1 MTR_7g104100 27.253 455 291 12 49 486 871 1302 1.51e-36 145
MS.gene053549.t1 MTR_7g104100 27.158 475 283 14 59 486 182 640 4.42e-36 144
MS.gene053549.t1 MTR_4g113070 27.455 448 293 10 51 485 836 1264 1.22e-34 139
MS.gene053549.t1 MTR_4g113070 27.883 477 279 14 58 486 149 608 9.47e-34 137
MS.gene053549.t1 MTR_4g058000 33.969 262 160 6 37 295 491 742 1.31e-34 139
MS.gene053549.t1 MTR_7g098890 27.984 486 276 20 36 485 756 1203 1.62e-31 130
MS.gene053549.t1 MTR_7g098890 25.783 415 288 7 52 451 129 538 7.81e-28 119
MS.gene053549.t1 MTR_3g040670 35.238 210 130 3 79 285 201 407 4.31e-31 125
MS.gene053549.t1 MTR_7g091350 34.052 232 76 6 37 265 3 160 1.67e-29 114
MS.gene053549.t1 MTR_4g053980 53.774 106 35 5 1 94 1 104 4.24e-23 94.7
MS.gene053549.t1 MTR_4g094080 44.643 112 51 3 298 404 58 163 6.83e-20 90.5
MS.gene053549.t1 MTR_4g094080 40.000 130 54 6 41 160 4 119 6.41e-13 69.7
MS.gene053549.t1 MTR_8g103450 30.000 200 109 5 55 252 244 414 1.21e-18 88.6
MS.gene053549.t1 MTR_7g407080 24.806 387 233 7 110 485 160 499 3.03e-18 88.2
MS.gene053549.t1 MTR_7g079540 28.571 266 150 9 24 268 73 319 9.02e-15 76.3
MS.gene053549.t1 MTR_4g109720 30.415 217 130 10 59 268 404 606 2.80e-14 75.9
MS.gene053549.t1 MTR_4g089130 41.860 86 47 1 175 260 1 83 2.96e-14 68.9
MS.gene053549.t1 MTR_1567s0010 28.283 198 125 5 70 264 253 436 3.04e-14 75.5
MS.gene053549.t1 MTR_4g081190 27.972 286 167 14 3 268 295 561 6.10e-14 75.5
MS.gene053549.t1 MTR_4g081190 29.224 219 129 8 59 268 1007 1208 1.38e-13 74.3
MS.gene053549.t1 MTR_7g033710 29.648 199 116 7 59 247 442 626 1.09e-13 74.3
MS.gene053549.t1 MTR_7g079540 29.778 225 120 8 24 231 73 276 1.52e-13 72.0
MS.gene053549.t1 MTR_1g059830 32.710 214 120 11 59 263 396 594 4.57e-13 72.0
MS.gene053549.t1 MTR_6g012535 27.354 223 128 7 58 265 15 218 4.72e-13 68.9
MS.gene053549.t1 MTR_3g099990 30.000 190 112 5 60 243 545 719 7.18e-13 72.0
MS.gene053549.t1 MTR_6g078080 25.796 314 203 10 59 359 382 678 1.37e-12 71.2
MS.gene053549.t1 MTR_3g437990 28.947 190 114 5 60 243 545 719 1.37e-12 70.9
MS.gene053549.t1 MTR_1g086150 27.413 259 163 13 59 304 401 647 3.06e-12 70.1
MS.gene053549.t1 MTR_7g091380 33.163 196 110 7 24 214 541 720 4.70e-12 69.3
MS.gene053549.t1 MTR_7g091380 26.733 202 126 7 49 243 1468 1654 1.79e-11 67.8
MS.gene053549.t1 MTR_1g086080 31.282 195 116 10 59 247 406 588 4.83e-12 69.3
MS.gene053549.t1 MTR_7g091380 33.163 196 110 7 24 214 541 720 5.04e-12 69.3
MS.gene053549.t1 MTR_7g091380 26.733 202 126 7 49 243 1468 1654 1.97e-11 67.4
MS.gene053549.t1 MTR_7g091380 33.163 196 110 7 24 214 359 538 5.13e-12 69.3
MS.gene053549.t1 MTR_7g091380 26.733 202 126 7 49 243 1286 1472 1.67e-11 67.8
MS.gene053549.t1 MTR_7g091380 33.163 196 110 7 24 214 339 518 5.98e-12 68.9
MS.gene053549.t1 MTR_7g091380 26.733 202 126 7 49 243 1266 1452 1.82e-11 67.4
MS.gene053549.t1 MTR_7g102070 33.862 189 101 10 68 247 1107 1280 7.84e-12 68.6
MS.gene053549.t1 MTR_3g080220 31.799 239 133 13 57 280 410 633 7.98e-12 68.6
MS.gene053549.t1 MTR_3g093430 30.909 275 155 15 53 313 375 628 9.40e-12 68.6
MS.gene053549.t1 MTR_5g075955 28.194 227 127 8 57 269 367 571 9.57e-12 67.8
MS.gene053549.t1 MTR_1g063170 32.836 201 105 11 59 247 1072 1254 1.41e-11 67.8
MS.gene053549.t1 MTR_6g009090 33.333 186 102 9 70 247 404 575 1.44e-11 67.4
MS.gene053549.t1 MTR_5g075955 28.194 227 127 8 57 269 479 683 1.48e-11 67.4
MS.gene053549.t1 MTR_2g018350 26.923 234 147 7 59 280 376 597 1.50e-11 67.8
MS.gene053549.t1 MTR_6g034270 25.656 343 206 17 5 341 408 707 2.79e-11 67.0
MS.gene053549.t1 MTR_5g075960 27.273 220 138 6 57 269 481 685 3.88e-11 66.2
MS.gene053549.t1 MTR_6g008820 28.205 273 166 11 50 309 143 398 4.54e-11 66.2
MS.gene053549.t1 MTR_3g086430 29.464 224 128 10 59 271 1018 1222 4.61e-11 66.2
MS.gene053549.t1 MTR_6g008820 28.916 249 147 11 70 305 377 608 4.78e-11 66.2
MS.gene053549.t1 MTR_4g124000 27.519 258 143 10 31 276 379 604 5.10e-11 65.9
MS.gene053549.t1 MTR_6g008820 28.916 249 147 11 70 305 55 286 5.43e-11 65.9
MS.gene053549.t1 MTR_6g008820 28.854 253 150 11 70 309 247 482 5.67e-11 65.9
MS.gene053549.t1 MTR_4g124000 27.519 258 143 10 31 276 379 604 6.11e-11 65.9
MS.gene053549.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 6.13e-11 65.9
MS.gene053549.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 7.98e-11 65.5
MS.gene053549.t1 MTR_6g009150 31.188 202 119 10 70 262 390 580 8.05e-11 65.5
MS.gene053549.t1 MTR_6g009150 31.313 198 114 9 59 247 1034 1218 8.33e-11 65.5
MS.gene053549.t1 MTR_6g009110 33.333 186 102 9 70 247 396 567 8.26e-11 65.5
MS.gene053549.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 8.36e-11 65.5
MS.gene053549.t1 MTR_6g009070 32.653 196 114 7 59 247 951 1135 8.70e-11 65.5
MS.gene053549.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 8.83e-11 65.5
MS.gene053549.t1 MTR_7g051100 31.088 193 119 8 59 247 374 556 9.10e-11 65.1
MS.gene053549.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 9.78e-11 65.1
MS.gene053549.t1 MTR_6g009200 29.956 227 127 9 59 272 1037 1244 9.90e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053549.t1 AT1G17840 52.789 502 195 6 37 505 50 542 2.23e-172 503
MS.gene053549.t1 AT3G21090 46.984 547 238 12 12 519 1 534 1.51e-158 468
MS.gene053549.t1 AT1G51500 45.580 509 234 8 33 505 20 521 5.20e-147 437
MS.gene053549.t1 AT1G51460 42.989 542 240 10 32 520 5 530 2.92e-139 417
MS.gene053549.t1 AT2G28070 35.838 519 288 9 34 520 111 616 3.70e-97 310
MS.gene053549.t1 AT2G28070 35.838 519 288 9 34 520 111 616 3.70e-97 310
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 2.82e-71 236
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 2.82e-71 236
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 4.01e-70 236
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 4.01e-70 236
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 1.71e-69 236
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 1.74e-69 236
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 2.08e-69 236
MS.gene053549.t1 AT2G01320 32.587 491 292 14 11 485 44 511 2.08e-69 236
MS.gene053549.t1 AT3G53510 35.023 434 255 7 56 476 123 542 6.39e-69 235
MS.gene053549.t1 AT3G55130 32.314 458 276 7 52 486 92 538 5.53e-67 229
MS.gene053549.t1 AT3G55110 32.735 446 287 6 49 486 81 521 1.09e-66 228
MS.gene053549.t1 AT5G06530 32.510 526 309 16 20 511 139 652 1.13e-66 228
MS.gene053549.t1 AT5G06530 32.510 526 309 16 20 511 139 652 3.45e-66 228
MS.gene053549.t1 AT5G06530 32.510 526 309 16 20 511 139 652 3.45e-66 228
MS.gene053549.t1 AT2G37360 32.667 450 273 7 56 486 130 568 2.62e-65 226
MS.gene053549.t1 AT5G13580 31.961 510 297 9 1 486 57 540 2.08e-64 223
MS.gene053549.t1 AT3G55100 32.353 442 272 9 57 486 49 475 3.44e-63 218
MS.gene053549.t1 AT3G55100 32.353 442 272 9 57 486 49 475 3.44e-63 218
MS.gene053549.t1 AT1G31770 33.790 438 273 9 54 486 76 501 4.81e-63 218
MS.gene053549.t1 AT4G27420 33.257 439 272 9 55 486 62 486 8.62e-62 214
MS.gene053549.t1 AT1G71960 34.459 444 248 16 52 476 76 495 1.59e-61 214
MS.gene053549.t1 AT3G55090 30.724 511 300 10 4 486 65 549 1.96e-61 215
MS.gene053549.t1 AT5G06530 33.049 469 269 15 76 511 1 457 1.86e-60 207
MS.gene053549.t1 AT2G13610 28.715 498 314 9 54 519 57 545 8.13e-60 209
MS.gene053549.t1 AT2G39350 31.590 459 277 9 55 486 105 553 9.15e-60 210
MS.gene053549.t1 AT3G25620 30.695 518 315 16 33 520 64 567 3.76e-56 199
MS.gene053549.t1 AT3G13220 31.847 471 280 14 57 509 104 551 3.86e-53 191
MS.gene053549.t1 AT3G25620 36.196 326 188 9 33 343 64 384 2.69e-51 182
MS.gene053549.t1 AT5G19410 27.500 480 282 10 59 506 66 511 6.42e-51 184
MS.gene053549.t1 AT5G19410 27.500 480 282 10 59 506 75 520 6.85e-51 184
MS.gene053549.t1 AT2G29940 28.926 484 294 11 31 486 813 1274 2.35e-50 186
MS.gene053549.t1 AT2G29940 26.819 481 280 12 58 486 174 634 8.39e-39 152
MS.gene053549.t1 AT4G25750 29.387 473 267 13 59 506 30 460 1.30e-49 179
MS.gene053549.t1 AT1G53270 28.277 534 321 10 20 519 2 507 7.40e-49 178
MS.gene053549.t1 AT5G52860 30.664 437 256 11 53 486 38 430 5.43e-48 175
MS.gene053549.t1 AT3G16340 28.982 452 281 12 51 485 833 1261 1.31e-46 175
MS.gene053549.t1 AT3G16340 27.848 474 283 14 58 486 161 620 1.81e-36 145
MS.gene053549.t1 AT3G16340 28.982 452 281 12 51 485 828 1256 1.33e-46 175
MS.gene053549.t1 AT3G16340 28.000 475 276 16 58 486 161 615 3.09e-35 141
MS.gene053549.t1 AT1G59870 28.825 451 283 11 51 485 886 1314 4.19e-46 174
MS.gene053549.t1 AT1G59870 26.931 479 281 13 58 486 185 644 2.68e-37 147
MS.gene053549.t1 AT1G15210 28.345 441 282 11 59 485 867 1287 9.20e-45 170
MS.gene053549.t1 AT1G15210 28.495 372 208 9 58 382 183 543 5.08e-35 140
MS.gene053549.t1 AT1G15520 29.084 502 302 17 13 485 796 1272 1.08e-44 169
MS.gene053549.t1 AT1G15520 26.923 468 295 10 58 486 168 627 6.12e-39 152
MS.gene053549.t1 AT4G15233 26.752 471 310 10 42 486 133 594 1.65e-44 169
MS.gene053549.t1 AT4G15233 28.631 482 297 14 23 485 768 1221 6.77e-43 164
MS.gene053549.t1 AT4G15233 26.752 471 310 10 42 486 71 532 1.97e-44 169
MS.gene053549.t1 AT4G15233 29.062 437 266 13 68 485 685 1096 2.56e-39 153
MS.gene053549.t1 AT4G15233 26.752 471 310 10 42 486 71 532 1.97e-44 169
MS.gene053549.t1 AT4G15233 29.062 437 266 13 68 485 685 1096 2.56e-39 153
MS.gene053549.t1 AT4G15236 28.717 491 299 15 16 485 777 1237 7.03e-44 167
MS.gene053549.t1 AT4G15236 25.514 486 315 8 42 486 131 610 1.60e-42 163
MS.gene053549.t1 AT1G53390 36.981 265 154 6 37 298 507 761 1.14e-43 166
MS.gene053549.t1 AT4G15233 25.767 489 310 10 42 486 133 612 1.28e-43 166
MS.gene053549.t1 AT4G15233 28.631 482 297 14 23 485 786 1239 7.27e-43 164
MS.gene053549.t1 AT4G15233 25.767 489 310 10 42 486 133 612 1.36e-43 166
MS.gene053549.t1 AT4G15233 28.631 482 297 14 23 485 786 1239 8.17e-43 164
MS.gene053549.t1 AT4G15233 25.767 489 310 10 42 486 71 550 1.55e-43 166
MS.gene053549.t1 AT4G15233 28.631 482 297 14 23 485 724 1177 6.99e-43 164
MS.gene053549.t1 AT4G15233 25.767 489 310 10 42 486 71 550 1.55e-43 166
MS.gene053549.t1 AT4G15233 28.631 482 297 14 23 485 724 1177 6.99e-43 164
MS.gene053549.t1 AT4G15233 28.631 482 297 14 23 485 777 1230 8.81e-43 164
MS.gene053549.t1 AT4G15233 25.562 489 302 11 42 486 133 603 2.27e-39 154
MS.gene053549.t1 AT2G37280 27.619 525 311 17 14 486 104 611 1.26e-42 163
MS.gene053549.t1 AT2G37280 27.447 521 309 16 33 508 809 1305 3.02e-41 159
MS.gene053549.t1 AT3G30842 28.571 469 282 13 44 485 826 1268 1.60e-42 163
MS.gene053549.t1 AT3G30842 26.415 477 286 14 58 486 160 619 5.46e-36 143
MS.gene053549.t1 AT2G37280 27.619 525 311 17 14 486 104 611 1.64e-42 163
MS.gene053549.t1 AT2G37280 27.789 493 297 15 54 508 834 1305 4.08e-41 159
MS.gene053549.t1 AT2G37010 36.585 287 161 8 37 320 484 752 1.81e-42 162
MS.gene053549.t1 AT2G37010 36.585 287 161 8 37 320 484 752 1.81e-42 162
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 798 1241 4.13e-42 162
MS.gene053549.t1 AT4G15215 26.816 537 316 15 42 511 128 654 5.71e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 798 1241 4.13e-42 162
MS.gene053549.t1 AT4G15215 26.816 537 316 15 42 511 128 654 5.71e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 798 1241 4.13e-42 162
MS.gene053549.t1 AT4G15215 26.816 537 316 15 42 511 128 654 5.71e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 798 1241 4.13e-42 162
MS.gene053549.t1 AT4G15215 26.816 537 316 15 42 511 128 654 5.71e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 798 1241 4.13e-42 162
MS.gene053549.t1 AT4G15215 26.816 537 316 15 42 511 128 654 5.71e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 791 1234 4.28e-42 162
MS.gene053549.t1 AT4G15215 26.679 536 311 14 42 511 128 647 6.43e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 791 1234 4.28e-42 162
MS.gene053549.t1 AT4G15215 26.679 536 311 14 42 511 128 647 6.43e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 791 1234 4.28e-42 162
MS.gene053549.t1 AT4G15215 26.679 536 311 14 42 511 128 647 6.43e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 791 1234 4.28e-42 162
MS.gene053549.t1 AT4G15215 26.679 536 311 14 42 511 128 647 6.43e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 794 1237 4.32e-42 162
MS.gene053549.t1 AT4G15215 26.679 536 311 14 42 511 131 650 7.46e-41 158
MS.gene053549.t1 AT4G15215 28.178 472 292 13 33 485 801 1244 5.07e-42 161
MS.gene053549.t1 AT4G15215 26.816 537 316 15 42 511 131 657 7.62e-41 158
MS.gene053549.t1 AT4G15230 25.971 489 309 10 42 486 55 534 9.75e-42 160
MS.gene053549.t1 AT4G15230 27.331 472 296 15 33 485 725 1168 8.46e-41 158
MS.gene053549.t1 AT4G15230 26.078 487 311 10 42 486 134 613 1.16e-41 160
MS.gene053549.t1 AT4G15230 27.331 472 296 15 33 485 804 1247 1.01e-40 157
MS.gene053549.t1 AT4G15230 25.971 489 309 10 42 486 134 613 1.25e-41 160
MS.gene053549.t1 AT4G15230 27.331 472 296 15 33 485 804 1247 1.08e-40 157
MS.gene053549.t1 AT4G15230 25.971 489 309 10 42 486 134 613 1.25e-41 160
MS.gene053549.t1 AT4G15230 27.331 472 296 15 33 485 804 1247 1.08e-40 157
MS.gene053549.t1 AT3G53480 27.255 499 297 15 51 508 869 1342 1.43e-41 160
MS.gene053549.t1 AT3G53480 27.383 493 285 15 46 486 175 646 1.51e-41 160
MS.gene053549.t1 AT2G37280 27.789 493 297 15 54 508 863 1334 5.74e-41 158
MS.gene053549.t1 AT2G37280 26.173 554 311 18 14 486 104 640 2.36e-37 147
MS.gene053549.t1 AT2G37280 27.789 493 297 15 54 508 676 1147 6.43e-41 158
MS.gene053549.t1 AT2G37280 27.646 463 271 14 71 486 8 453 1.58e-37 148
MS.gene053549.t1 AT1G15520 28.926 484 290 17 13 467 796 1254 2.62e-40 156
MS.gene053549.t1 AT1G15520 26.923 468 295 10 58 486 168 627 4.28e-39 153
MS.gene053549.t1 AT2G26910 26.339 448 298 8 51 485 837 1265 1.52e-37 148
MS.gene053549.t1 AT2G26910 26.392 485 289 14 51 486 143 608 1.96e-31 130
MS.gene053549.t1 AT2G36380 27.335 439 283 12 49 472 869 1286 2.50e-36 144
MS.gene053549.t1 AT2G36380 27.484 473 284 13 59 486 188 646 2.80e-35 141
MS.gene053549.t1 AT1G66950 27.273 473 285 12 59 486 190 648 5.83e-36 143
MS.gene053549.t1 AT1G66950 26.531 441 284 12 49 472 870 1287 6.10e-36 143
MS.gene053549.t1 AT5G60740 33.588 262 161 6 37 295 499 750 3.83e-34 138
MS.gene053549.t1 AT5G61700 28.218 202 126 5 54 248 610 799 2.29e-14 76.6
MS.gene053549.t1 AT5G61700 28.218 202 126 5 54 248 610 799 2.29e-14 76.6
MS.gene053549.t1 AT3G47730 27.863 262 154 8 1 243 476 721 7.52e-14 75.1
MS.gene053549.t1 AT1G27940 30.412 194 119 6 59 247 388 570 1.33e-13 74.3
MS.gene053549.t1 AT1G27940 29.167 216 133 8 59 268 1021 1222 2.50e-11 67.0
MS.gene053549.t1 AT1G27940 30.412 194 119 6 59 247 174 356 1.47e-13 74.3
MS.gene053549.t1 AT1G27940 29.167 216 133 8 59 268 807 1008 1.92e-11 67.4
MS.gene053549.t1 AT5G61700 27.919 197 119 6 54 243 610 790 1.50e-13 73.9
MS.gene053549.t1 AT5G39040 30.901 233 137 10 56 281 410 625 2.06e-13 73.2
MS.gene053549.t1 AT4G33460 28.395 243 150 7 35 276 38 257 2.83e-13 70.5
MS.gene053549.t1 AT1G70610 27.059 255 154 9 53 295 285 519 3.11e-13 72.4
MS.gene053549.t1 AT1G28010 30.412 194 119 7 59 247 389 571 3.63e-13 73.2
MS.gene053549.t1 AT1G28010 31.336 217 129 9 58 268 1022 1224 9.22e-11 65.5
MS.gene053549.t1 AT1G70610 27.059 255 154 9 53 295 466 700 3.73e-13 72.8
MS.gene053549.t1 AT5G61690 30.366 191 110 7 60 243 548 722 6.69e-13 72.0
MS.gene053549.t1 AT5G61730 30.890 191 109 7 60 243 539 713 1.56e-12 70.9
MS.gene053549.t1 AT5G61730 30.890 191 109 7 60 243 549 723 1.72e-12 70.9
MS.gene053549.t1 AT2G41700 32.000 200 107 8 24 214 466 645 2.36e-12 70.5
MS.gene053549.t1 AT2G41700 26.633 199 124 6 52 243 1424 1607 2.49e-11 67.4
MS.gene053549.t1 AT2G47000 30.698 215 124 11 40 247 387 583 2.51e-12 70.1
MS.gene053549.t1 AT2G47000 30.698 215 124 11 40 247 387 583 2.51e-12 70.1
MS.gene053549.t1 AT2G47000 30.698 215 124 11 40 247 387 583 2.51e-12 70.1
MS.gene053549.t1 AT2G47000 30.698 215 124 11 40 247 387 583 2.51e-12 70.1
MS.gene053549.t1 AT2G47000 30.698 215 124 11 40 247 387 583 2.73e-12 70.1
MS.gene053549.t1 AT2G47000 30.698 215 124 11 40 247 387 583 2.73e-12 70.1
MS.gene053549.t1 AT2G47000 30.698 215 124 11 40 247 387 583 2.73e-12 70.1
MS.gene053549.t1 AT3G47750 25.269 186 124 5 54 234 630 805 2.78e-12 70.1
MS.gene053549.t1 AT3G47780 25.128 195 127 6 54 243 628 808 2.83e-12 70.1
MS.gene053549.t1 AT2G41700 32.000 200 107 8 24 214 536 715 2.94e-12 70.1
MS.gene053549.t1 AT2G41700 26.633 199 124 6 52 243 1466 1649 2.33e-11 67.4
MS.gene053549.t1 AT3G47790 25.405 185 125 4 54 234 601 776 4.36e-12 69.3
MS.gene053549.t1 AT3G47790 25.405 185 125 4 54 234 482 657 4.56e-12 68.9
MS.gene053549.t1 AT3G47770 26.141 241 145 10 5 224 539 767 4.82e-12 69.3
MS.gene053549.t1 AT3G47790 25.773 194 127 5 54 243 601 781 5.12e-12 69.3
MS.gene053549.t1 AT5G61740 26.190 210 135 7 13 217 427 621 5.56e-12 68.9
MS.gene053549.t1 AT3G47770 26.141 241 145 10 5 224 565 793 5.79e-12 68.9
MS.gene053549.t1 AT4G28620 29.744 195 123 5 57 247 452 636 6.97e-12 68.6
MS.gene053549.t1 AT3G28390 32.178 202 117 10 70 262 375 565 7.05e-12 68.9
MS.gene053549.t1 AT3G28390 29.412 221 136 6 59 272 997 1204 1.69e-11 67.8
MS.gene053549.t1 AT5G61740 26.190 210 135 7 13 217 566 760 8.21e-12 68.6
MS.gene053549.t1 AT5G61740 26.190 210 135 7 13 217 532 726 9.04e-12 68.2
MS.gene053549.t1 AT5G61690 29.016 193 109 7 60 243 548 721 1.04e-11 68.2
MS.gene053549.t1 AT3G28360 30.198 202 121 9 70 262 374 564 1.32e-11 68.2
MS.gene053549.t1 AT1G10680 31.351 185 107 9 70 247 389 560 1.44e-11 67.8
MS.gene053549.t1 AT1G10680 31.351 185 107 9 70 247 389 560 1.46e-11 67.8
MS.gene053549.t1 AT3G28380 32.178 202 117 10 70 262 387 577 1.83e-11 67.4
MS.gene053549.t1 AT4G25960 29.808 208 120 10 70 268 429 619 4.15e-11 66.2
MS.gene053549.t1 AT3G28415 29.108 213 125 8 70 272 1004 1200 4.64e-11 66.2
MS.gene053549.t1 AT1G02530 29.091 220 138 9 57 271 383 589 5.05e-11 65.9
MS.gene053549.t1 AT1G02530 29.091 220 138 9 57 271 383 589 5.29e-11 66.2
MS.gene053549.t1 AT3G47760 24.260 169 113 5 54 217 589 747 5.64e-11 65.9
MS.gene053549.t1 AT3G28415 29.108 213 125 8 70 272 1012 1208 5.76e-11 65.9
MS.gene053549.t1 AT3G47760 24.260 169 113 5 54 217 629 787 5.93e-11 65.9
MS.gene053549.t1 AT3G47760 25.146 171 109 5 54 217 599 757 6.67e-11 65.5
MS.gene053549.t1 AT3G28345 32.787 183 107 8 70 247 387 558 7.88e-11 65.5

Find 102 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTAACTTGGAAAGATTTA+TGG 0.118017 4.3:+20443454 MS.gene053549:CDS
GTCTATAGTATTGTCTTTAA+AGG 0.148699 4.3:+20446003 MS.gene053549:CDS
GATATCAATTGCTTGTTCTA+TGG 0.227852 4.3:-20445918 None:intergenic
ATTGGAGGGTGGGGTGTTAA+AGG 0.234899 4.3:+20444908 MS.gene053549:CDS
ACTGAAATCATCAGCAAATA+TGG 0.242245 4.3:-20446854 None:intergenic
AGCCACTGTCTTTAATGATT+TGG 0.262428 4.3:+20446255 MS.gene053549:CDS
TTTAATTTCTTGGTTTCTTT+CGG 0.280423 4.3:-20445963 None:intergenic
CTTTCAATCTCTAGGATATT+AGG 0.283672 4.3:-20443372 None:intergenic
ATGATTCCCATTAGAAAATC+AGG 0.291192 4.3:-20447010 None:intergenic
TTTGAACGTGAAAGACTAAA+TGG 0.294897 4.3:+20446782 MS.gene053549:CDS
AATAGCTTCCTTGGACAAAA+AGG 0.296864 4.3:+20445057 MS.gene053549:CDS
AAGACAAAAGACAAAGATTA+TGG 0.307904 4.3:-20445144 None:intergenic
TGAAAGCAAATCAATTCTTC+AGG 0.309362 4.3:+20443509 MS.gene053549:CDS
CTGATGATTTCAGTCATTCC+TGG 0.309905 4.3:+20446863 MS.gene053549:CDS
CATGTTCACAAAAGATCTTC+TGG 0.312879 4.3:-20446170 None:intergenic
CTTAACTTGGAAAGATTTAT+GGG 0.314150 4.3:+20443455 MS.gene053549:CDS
TTCGTGATCTTGGCTATTAT+TGG 0.317963 4.3:+20446194 MS.gene053549:CDS
TTGGCTATAATGGGTCCTTC+TGG 0.326290 4.3:+20443564 MS.gene053549:CDS
AAGAATTGATTTGCTTTCAT+TGG 0.326703 4.3:-20443505 None:intergenic
TAAAAGTAATGGCTCAATTC+AGG 0.332362 4.3:+20446279 MS.gene053549:CDS
TTTCTAATGGGAATCATAAC+TGG 0.337952 4.3:+20447016 MS.gene053549:CDS
TGCAAAGCCAGGTCAGCTTT+TGG 0.346322 4.3:+20443545 MS.gene053549:CDS
CACGGCTTCTTTAACGGTTA+AGG 0.348299 4.3:-20444774 None:intergenic
AGAAGGGAGTTTGCTTAACT+TGG 0.354423 4.3:+20443442 MS.gene053549:CDS
AACAAACAAGCATTGGCTTA+TGG 0.366572 4.3:+20444536 MS.gene053549:CDS
GGTGTTACGCCATATGTAAT+TGG 0.366613 4.3:+20446812 MS.gene053549:CDS
GATGCAATCAACACAAGAAT+TGG 0.372547 4.3:+20444890 MS.gene053549:CDS
GGTTCAAACACAAGACAATC+AGG 0.375821 4.3:+20444494 MS.gene053549:CDS
TGGGGTGTTAAAGGCATAAG+TGG 0.376232 4.3:+20444917 MS.gene053549:CDS
AAACTTCAGTACTAGGTTGA+TGG 0.382630 4.3:-20445111 None:intergenic
ATAGTACACGGCTTCTTTAA+CGG 0.384633 4.3:-20444780 None:intergenic
ATATGTATTTCAGGGAGATT+AGG 0.390555 4.3:+20444473 MS.gene053549:intron
CACCAATGGTCATGAAAGTT+AGG 0.401646 4.3:-20446426 None:intergenic
GTGAACATGTTTCGTGATCT+TGG 0.409054 4.3:+20446184 MS.gene053549:CDS
ATAACTGGTGCTGGAATTCA+AGG 0.410331 4.3:+20447031 MS.gene053549:CDS
TATGAAAAGAATAGCTTCCT+TGG 0.410861 4.3:+20445048 MS.gene053549:CDS
TGGTGGATTCCCTTCTTATG+TGG 0.415254 4.3:+20446444 MS.gene053549:CDS
GTGACTGTTTCTGCTTCAAC+AGG 0.427001 4.3:+20443477 MS.gene053549:CDS
GGCTATTATTGGTTACGCCT+TGG 0.429860 4.3:+20446205 MS.gene053549:CDS
ATGGGAATCATAACTGGTGC+TGG 0.440680 4.3:+20447022 MS.gene053549:CDS
GGGGTGTTAAAGGCATAAGT+GGG 0.451027 4.3:+20444918 MS.gene053549:CDS
TCAGGCAAAACAGTTTACTT+TGG 0.455818 4.3:+20445166 MS.gene053549:CDS
TTGATGGATTGAGGCAATAA+TGG 0.456241 4.3:-20445095 None:intergenic
TTCCTAACTTTCATGACCAT+TGG 0.456447 4.3:+20446424 MS.gene053549:CDS
GAAAGACTAAATGGACACTA+TGG 0.458475 4.3:+20446791 MS.gene053549:CDS
AATGATTTGGATAAAAGTAA+TGG 0.458739 4.3:+20446268 MS.gene053549:CDS
AGTGTGTTTCCAATTACATA+TGG 0.463513 4.3:-20446821 None:intergenic
TTGTGTCAGGTAATTGAAGT+TGG 0.471985 4.3:-20444808 None:intergenic
TCTTCATTAGACATTGTGTC+AGG 0.473825 4.3:-20444821 None:intergenic
TCAATTCTTCAGGGTCTGAC+TGG 0.475591 4.3:+20443519 MS.gene053549:CDS
GAGATGGATTTAGCAGAGAC+TGG 0.477488 4.3:+20445887 MS.gene053549:CDS
CTAACTTTCATGACCATTGG+TGG 0.478663 4.3:+20446427 MS.gene053549:CDS
TTCATGTCCTCCACATAAGA+AGG 0.479736 4.3:-20446454 None:intergenic
ATAATGGGTCCTTCTGGTTG+TGG 0.481002 4.3:+20443570 MS.gene053549:CDS
GATGAATGGAGGAGAAGAGA+AGG 0.482193 4.3:+20443425 MS.gene053549:CDS
ACCTCAGATGCAGCAGAAGC+AGG 0.491581 4.3:-20445190 None:intergenic
ACACTTCTTGATGCTTTAGC+AGG 0.497837 4.3:+20443600 MS.gene053549:CDS
AGTACTAGGTTGATGGATTG+AGG 0.499081 4.3:-20445104 None:intergenic
CAAGGGATTATGATGTTGGC+AGG 0.499670 4.3:+20447049 MS.gene053549:CDS
GAAAGCAAATCAATTCTTCA+GGG 0.502763 4.3:+20443510 MS.gene053549:CDS
TATTAGGCACAGATGAAAGA+AGG 0.506902 4.3:-20443356 None:intergenic
TTCTTATGTGGAGGACATGA+AGG 0.508636 4.3:+20446456 MS.gene053549:CDS
GCCATAGCATATTACCCTCC+AGG 0.509466 4.3:+20446887 MS.gene053549:CDS
AATTCAAGGGATTATGATGT+TGG 0.510525 4.3:+20447045 MS.gene053549:CDS
GGGTAATATGCTATGGCTCC+AGG 0.511427 4.3:-20446881 None:intergenic
CTCTTGCGCTTTCAATCTCT+AGG 0.511830 4.3:-20443380 None:intergenic
AACACAAGAATTGGAGGGTG+GGG 0.512629 4.3:+20444899 MS.gene053549:CDS
ACCTGCTTCTGCTGCATCTG+AGG 0.514345 4.3:+20445189 MS.gene053549:CDS
ATGAATGGAGGAGAAGAGAA+GGG 0.524895 4.3:+20443426 MS.gene053549:CDS
TGGATTCCCTTCTTATGTGG+AGG 0.531042 4.3:+20446447 MS.gene053549:CDS
CAATGGCAACAAACAAGCAT+TGG 0.531389 4.3:+20444529 MS.gene053549:CDS
GATTGAAAGCGCAAGAGAAG+AGG 0.532796 4.3:+20443386 MS.gene053549:CDS
ACCTGGAGGGTAATATGCTA+TGG 0.542119 4.3:-20446888 None:intergenic
AGCTGCACTATCAAGTCCAC+TGG 0.547420 4.3:-20445014 None:intergenic
CCTTGGCATATATATTGCGT+TGG 0.554763 4.3:+20446222 MS.gene053549:CDS
GCAATCAACACAAGAATTGG+AGG 0.560697 4.3:+20444893 MS.gene053549:CDS
TGTGTCAGGTAATTGAAGTT+GGG 0.561591 4.3:-20444807 None:intergenic
ATCCAAATCATTAAAGACAG+TGG 0.564200 4.3:-20446257 None:intergenic
CAACACAAGAATTGGAGGGT+GGG 0.564826 4.3:+20444898 MS.gene053549:CDS
CTGACTGGTTATGCAAAGCC+AGG 0.567099 4.3:+20443534 MS.gene053549:CDS
ATTATAGCCAAAAGCTGACC+TGG 0.570027 4.3:-20443552 None:intergenic
GGGTGTTAAAGGCATAAGTG+GGG 0.578959 4.3:+20444919 MS.gene053549:CDS
TGATTCCCATTAGAAAATCA+GGG 0.592259 4.3:-20447009 None:intergenic
GAAAGCGCAAGAGAAGAGGT+AGG 0.592493 4.3:+20443390 MS.gene053549:CDS
TTTACTTAAAACTATAAACA+AGG 0.600618 4.3:+20445352 MS.gene053549:CDS
TCAATGTTAGGATATTGAGA+TGG 0.603713 4.3:+20445871 MS.gene053549:intron
GTTCAAACACAAGACAATCA+GGG 0.607925 4.3:+20444495 MS.gene053549:CDS
TTTCTTGATGAACCAACCAG+TGG 0.612742 4.3:+20444998 MS.gene053549:CDS
ATTAGGCACAGATGAAAGAA+GGG 0.612796 4.3:-20443355 None:intergenic
GCACTATCAAGTCCACTGGT+TGG 0.624936 4.3:-20445010 None:intergenic
CCAACGCAATATATATGCCA+AGG 0.625218 4.3:-20446222 None:intergenic
ATGAAGAATATGAGCTCACA+AGG 0.626092 4.3:-20445940 None:intergenic
TGAGAACTAAGCACTGATTG+AGG 0.631489 4.3:-20446147 None:intergenic
TTCAAACACAAGACAATCAG+GGG 0.633055 4.3:+20444496 MS.gene053549:CDS
TCATGTCCTCCACATAAGAA+GGG 0.633774 4.3:-20446453 None:intergenic
TCAACACAAGAATTGGAGGG+TGG 0.634185 4.3:+20444897 MS.gene053549:CDS
AGCATTGGCTTATGGAACCT+CGG 0.634970 4.3:+20444544 MS.gene053549:CDS
AAGTTGGGCTGAATAGTACA+CGG 0.665709 4.3:-20444792 None:intergenic
CAATCAACACAAGAATTGGA+GGG 0.667741 4.3:+20444894 MS.gene053549:CDS
ATAAGAAGGGAATCCACCAA+TGG 0.674842 4.3:-20446440 None:intergenic
TAACTGGTGCTGGAATTCAA+GGG 0.675155 4.3:+20447032 MS.gene053549:CDS
GGTGTTAAAGGCATAAGTGG+GGG 0.724955 4.3:+20444920 MS.gene053549:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATTTATATACAAATTAT+TGG + chr4.3:20444308-20444327 MS.gene053549:intron 10.0%
!! TATATAATTGAAAATTAACA+TGG - chr4.3:20445232-20445251 None:intergenic 10.0%
!!! ATTATTTTTATATGTATTTC+AGG + chr4.3:20444464-20444483 MS.gene053549:intron 10.0%
!!! TTATTTTTATATGTATTTCA+GGG + chr4.3:20444465-20444484 MS.gene053549:intron 10.0%
!! AAACAGAATTAATTACTAAA+TGG - chr4.3:20445265-20445284 None:intergenic 15.0%
!! ATATGTTGTAATACTAATTA+TGG - chr4.3:20445810-20445829 None:intergenic 15.0%
!! TTTACTTAAAACTATAAACA+AGG + chr4.3:20445352-20445371 MS.gene053549:CDS 15.0%
!!! ATACTTCATTTTTAATTTCT+TGG - chr4.3:20445976-20445995 None:intergenic 15.0%
!!! CACTAAATTATTGTTTTATT+CGG + chr4.3:20446721-20446740 MS.gene053549:intron 15.0%
!!! TATAGTTTTAAGTAAATGAT+CGG - chr4.3:20445348-20445367 None:intergenic 15.0%
!! ATATTGTTGAAATAGTATGT+TGG - chr4.3:20443739-20443758 None:intergenic 20.0%
!! GCAAATATATATTGAATGAA+TGG + chr4.3:20446518-20446537 MS.gene053549:intron 20.0%
!! GTTGAATCTTGAATTATTTA+AGG + chr4.3:20445678-20445697 MS.gene053549:intron 20.0%
!! TTATATACAAATTATTGGGT+GGG + chr4.3:20444313-20444332 MS.gene053549:intron 20.0%
!! TTGAAATATGTTTCAATGTT+AGG + chr4.3:20445859-20445878 MS.gene053549:intron 20.0%
!! TTTATATACAAATTATTGGG+TGG + chr4.3:20444312-20444331 MS.gene053549:intron 20.0%
!!! AATGATTTGGATAAAAGTAA+TGG + chr4.3:20446268-20446287 MS.gene053549:CDS 20.0%
!!! AATTTGGTTTTAAACTAAGA+AGG + chr4.3:20444111-20444130 MS.gene053549:intron 20.0%
!!! ACATTGAATCAACTTTTATT+AGG - chr4.3:20445740-20445759 None:intergenic 20.0%
!!! ATTTGGTTTTAAACTAAGAA+GGG + chr4.3:20444112-20444131 MS.gene053549:intron 20.0%
!!! ATTTTGTATATTGTTTCTCA+AGG + chr4.3:20443771-20443790 MS.gene053549:intron 20.0%
!!! CATATGCTATTAATTTGTAT+AGG + chr4.3:20446757-20446776 MS.gene053549:intron 20.0%
!!! GATTTTACAATAAGAGAAAT+GGG + chr4.3:20444860-20444879 MS.gene053549:CDS 20.0%
!!! TAAATTTAGCTCAAATTTAG+AGG - chr4.3:20446032-20446051 None:intergenic 20.0%
!!! TGATTTTACAATAAGAGAAA+TGG + chr4.3:20444859-20444878 MS.gene053549:CDS 20.0%
!!! TGTGTTTTTAATTCTTAAAC+AGG + chr4.3:20444209-20444228 MS.gene053549:intron 20.0%
!!! TTTAATTTCTTGGTTTCTTT+CGG - chr4.3:20445966-20445985 None:intergenic 20.0%
!!! TTTAGATTTTATATATACCG+AGG - chr4.3:20444564-20444583 None:intergenic 20.0%
! AAGACAAAAGACAAAGATTA+TGG - chr4.3:20445147-20445166 None:intergenic 25.0%
! ACAAAGTTGACATAAAAACA+TGG - chr4.3:20445621-20445640 None:intergenic 25.0%
! AGGTCAGTTAATGTAATATA+AGG - chr4.3:20446317-20446336 None:intergenic 25.0%
! ATATTGACATGAAACTTTGA+TGG + chr4.3:20446077-20446096 MS.gene053549:intron 25.0%
! CCATGATACTAAAAAAAAGA+AGG - chr4.3:20445436-20445455 None:intergenic 25.0%
! GAAAAACATGTGTTTATCAA+AGG - chr4.3:20443954-20443973 None:intergenic 25.0%
! GCTACATATTACTAGTAATT+TGG + chr4.3:20444095-20444114 MS.gene053549:intron 25.0%
! GTCTATAGTATTGTCTTTAA+AGG + chr4.3:20446003-20446022 MS.gene053549:CDS 25.0%
! TAATATGTATATGTGATCAC+AGG + chr4.3:20444718-20444737 MS.gene053549:intron 25.0%
! TATTGACATGAAACTTTGAT+GGG + chr4.3:20446078-20446097 MS.gene053549:intron 25.0%
! TGACAAAATTCAAATCTCTT+CGG + chr4.3:20444031-20444050 MS.gene053549:intron 25.0%
! TTCAAAGCAAAAAACTACAT+TGG - chr4.3:20445293-20445312 None:intergenic 25.0%
!! AAAGTCAAACTTTTACCAAT+GGG - chr4.3:20444000-20444019 None:intergenic 25.0%
!! AGTTCATAACTTTTGTGAAT+TGG + chr4.3:20446579-20446598 MS.gene053549:intron 25.0%
!! ATTTTCTTGTCTAATGTTAG+TGG + chr4.3:20446955-20446974 MS.gene053549:intron 25.0%
!! CTTAACTTGGAAAGATTTAT+GGG + chr4.3:20443455-20443474 MS.gene053549:CDS 25.0%
!! TAAAGTCAAACTTTTACCAA+TGG - chr4.3:20444001-20444020 None:intergenic 25.0%
!!! AAGAATTGATTTGCTTTCAT+TGG - chr4.3:20443508-20443527 None:intergenic 25.0%
!!! ACCTTATGTTTTAAAGTTCA+TGG + chr4.3:20443869-20443888 MS.gene053549:intron 25.0%
!!! ATGTAGTTTTTTGCTTTGAA+CGG + chr4.3:20445293-20445312 MS.gene053549:intron 25.0%
!!! CCTTCTTTTTTTTAGTATCA+TGG + chr4.3:20445433-20445452 MS.gene053549:intron 25.0%
!!! GTTTTTAATTCTTAAACAGG+AGG + chr4.3:20444212-20444231 MS.gene053549:intron 25.0%
!!! TATAAACAAGGATTTTGATC+AGG + chr4.3:20445364-20445383 MS.gene053549:CDS 25.0%
!!! TGGCTTCTATTTCATTTTTT+TGG + chr4.3:20443896-20443915 MS.gene053549:intron 25.0%
!!! TGTTTTTCTGAAGAATTTGT+CGG + chr4.3:20443966-20443985 MS.gene053549:intron 25.0%
!!! TTGTTTTATTCGGTCTTTTA+TGG + chr4.3:20446731-20446750 MS.gene053549:intron 25.0%
AAAAACCAGTTAAAACCACA+TGG - chr4.3:20444179-20444198 None:intergenic 30.0%
AATCGTTCAAAATTATCCCT+CGG + chr4.3:20446627-20446646 MS.gene053549:intron 30.0%
AATTCAAGGGATTATGATGT+TGG + chr4.3:20447045-20447064 MS.gene053549:CDS 30.0%
ACAAAAAGGATGGAATTCAA+AGG + chr4.3:20445071-20445090 MS.gene053549:CDS 30.0%
ACATACAAGAAAAAACATGC+TGG + chr4.3:20446121-20446140 MS.gene053549:CDS 30.0%
ACTGAAATCATCAGCAAATA+TGG - chr4.3:20446857-20446876 None:intergenic 30.0%
AGGAAGTTATATATAGCAGT+TGG - chr4.3:20443704-20443723 None:intergenic 30.0%
AGTGTGTTTCCAATTACATA+TGG - chr4.3:20446824-20446843 None:intergenic 30.0%
AGTTGAAAAACTTCAGTACT+AGG - chr4.3:20445121-20445140 None:intergenic 30.0%
AGTTGACATAAAAACATGGT+TGG - chr4.3:20445617-20445636 None:intergenic 30.0%
ATATGTATTTCAGGGAGATT+AGG + chr4.3:20444473-20444492 MS.gene053549:intron 30.0%
ATCCAAATCATTAAAGACAG+TGG - chr4.3:20446260-20446279 None:intergenic 30.0%
ATGATTCCCATTAGAAAATC+AGG - chr4.3:20447013-20447032 None:intergenic 30.0%
ATGGTTGGATACAAAAATGT+AGG - chr4.3:20445602-20445621 None:intergenic 30.0%
GAAAGCAAATCAATTCTTCA+GGG + chr4.3:20443510-20443529 MS.gene053549:CDS 30.0%
GAAGATAGTAGCTAAACTTA+AGG - chr4.3:20446337-20446356 None:intergenic 30.0%
GATATCAATTGCTTGTTCTA+TGG - chr4.3:20445921-20445940 None:intergenic 30.0%
GATTATCAGAATTCACAATG+TGG - chr4.3:20445555-20445574 None:intergenic 30.0%
TAAAAGTAATGGCTCAATTC+AGG + chr4.3:20446279-20446298 MS.gene053549:CDS 30.0%
TATGAAAAGAATAGCTTCCT+TGG + chr4.3:20445048-20445067 MS.gene053549:CDS 30.0%
TCAATGTTAGGATATTGAGA+TGG + chr4.3:20445871-20445890 MS.gene053549:intron 30.0%
TCATCAAGAAAAAGAAGTCT+AGG - chr4.3:20444989-20445008 None:intergenic 30.0%
TCTTCGGTCGTAAAATAAAT+AGG + chr4.3:20444047-20444066 MS.gene053549:intron 30.0%
TGAAAGCAAATCAATTCTTC+AGG + chr4.3:20443509-20443528 MS.gene053549:CDS 30.0%
TGATTCCCATTAGAAAATCA+GGG - chr4.3:20447012-20447031 None:intergenic 30.0%
TGCAAAATAGATAGACACTA+GGG - chr4.3:20445526-20445545 None:intergenic 30.0%
TTTCTAATGGGAATCATAAC+TGG + chr4.3:20447016-20447035 MS.gene053549:CDS 30.0%
TTTGAACGTGAAAGACTAAA+TGG + chr4.3:20446782-20446801 MS.gene053549:CDS 30.0%
! AATCTTTGTCTTTTGTCTTC+AGG + chr4.3:20445148-20445167 MS.gene053549:CDS 30.0%
! ATTGTCCCTGATTTTCTAAT+GGG + chr4.3:20447004-20447023 MS.gene053549:CDS 30.0%
! GATTTTCCACAAAGCATAAA+TGG - chr4.3:20443642-20443661 None:intergenic 30.0%
! GCTTAACTTGGAAAGATTTA+TGG + chr4.3:20443454-20443473 MS.gene053549:CDS 30.0%
!! CTTTCAATCTCTAGGATATT+AGG - chr4.3:20443375-20443394 None:intergenic 30.0%
!! GAAATAGTATGTTGGTGATT+TGG - chr4.3:20443731-20443750 None:intergenic 30.0%
!! GCCATGAACTTTAAAACATA+AGG - chr4.3:20443873-20443892 None:intergenic 30.0%
!! GTTTTAAGTAAATGATCGGA+TGG - chr4.3:20445344-20445363 None:intergenic 30.0%
!! TATGTTGGTGATTTGGATTT+AGG - chr4.3:20443724-20443743 None:intergenic 30.0%
!!! CTAATTTTGCATGTCACTTT+TGG + chr4.3:20446356-20446375 MS.gene053549:intron 30.0%
!!! TGTGGTTTTAACTGGTTTTT+AGG + chr4.3:20444179-20444198 MS.gene053549:intron 30.0%
AAGTCAAAACTACTTCCATG+TGG + chr4.3:20444161-20444180 MS.gene053549:intron 35.0%
AATAGCTTCCTTGGACAAAA+AGG + chr4.3:20445057-20445076 MS.gene053549:CDS 35.0%
AGCCACTGTCTTTAATGATT+TGG + chr4.3:20446255-20446274 MS.gene053549:CDS 35.0%
ATAGTACACGGCTTCTTTAA+CGG - chr4.3:20444783-20444802 None:intergenic 35.0%
ATGAAACAAAGCACAATCTG+TGG + chr4.3:20444346-20444365 MS.gene053549:intron 35.0%
ATGAAGAATATGAGCTCACA+AGG - chr4.3:20445943-20445962 None:intergenic 35.0%
ATTAGGCACAGATGAAAGAA+GGG - chr4.3:20443358-20443377 None:intergenic 35.0%
ATTCTCGAAGTTGTAAGCAT+CGG + chr4.3:20446549-20446568 MS.gene053549:intron 35.0%
CAATCAACACAAGAATTGGA+GGG + chr4.3:20444894-20444913 MS.gene053549:CDS 35.0%
CATGTTCACAAAAGATCTTC+TGG - chr4.3:20446173-20446192 None:intergenic 35.0%
GAAAGACTAAATGGACACTA+TGG + chr4.3:20446791-20446810 MS.gene053549:CDS 35.0%
GATGCAATCAACACAAGAAT+TGG + chr4.3:20444890-20444909 MS.gene053549:CDS 35.0%
GCATCAAAAAAGATGAATGG+AGG + chr4.3:20443414-20443433 MS.gene053549:CDS 35.0%
GTGCAAAATAGATAGACACT+AGG - chr4.3:20445527-20445546 None:intergenic 35.0%
GTTCAAACACAAGACAATCA+GGG + chr4.3:20444495-20444514 MS.gene053549:CDS 35.0%
TATTAGGCACAGATGAAAGA+AGG - chr4.3:20443359-20443378 None:intergenic 35.0%
TCAGGCAAAACAGTTTACTT+TGG + chr4.3:20445166-20445185 MS.gene053549:CDS 35.0%
TCTTCATTAGACATTGTGTC+AGG - chr4.3:20444824-20444843 None:intergenic 35.0%
TCTTGACCATTTATGCTTTG+TGG + chr4.3:20443633-20443652 MS.gene053549:intron 35.0%
TGTGTCAGGTAATTGAAGTT+GGG - chr4.3:20444810-20444829 None:intergenic 35.0%
TTCAAACACAAGACAATCAG+GGG + chr4.3:20444496-20444515 MS.gene053549:CDS 35.0%
TTCCTAACTTTCATGACCAT+TGG + chr4.3:20446424-20446443 MS.gene053549:CDS 35.0%
TTCGTGATCTTGGCTATTAT+TGG + chr4.3:20446194-20446213 MS.gene053549:CDS 35.0%
TTGTGTCAGGTAATTGAAGT+TGG - chr4.3:20444811-20444830 None:intergenic 35.0%
! AAACTTCAGTACTAGGTTGA+TGG - chr4.3:20445114-20445133 None:intergenic 35.0%
! AATTCCATCCTTTTTGTCCA+AGG - chr4.3:20445068-20445087 None:intergenic 35.0%
! ATATTTCCGACTTGTATCGA+AGG - chr4.3:20445469-20445488 None:intergenic 35.0%
! CATTGTCCCTGATTTTCTAA+TGG + chr4.3:20447003-20447022 MS.gene053549:CDS 35.0%
! GGAGCATCAAAAAAGATGAA+TGG + chr4.3:20443411-20443430 MS.gene053549:CDS 35.0%
!! AACAAACAAGCATTGGCTTA+TGG + chr4.3:20444536-20444555 MS.gene053549:CDS 35.0%
!! AATGATCGGATGGATTTTGT+AGG - chr4.3:20445334-20445353 None:intergenic 35.0%
!! ATGATCGGATGGATTTTGTA+GGG - chr4.3:20445333-20445352 None:intergenic 35.0%
!! GAAACTTTGATGGGTGTTTT+AGG + chr4.3:20446087-20446106 MS.gene053549:intron 35.0%
!! TCAAATCCTTTTTGAAGACC+TGG - chr4.3:20446908-20446927 None:intergenic 35.0%
!! TTGATGGATTGAGGCAATAA+TGG - chr4.3:20445098-20445117 None:intergenic 35.0%
!!! GTTTTAAAGTTCATGGCTGA+TGG + chr4.3:20443876-20443895 MS.gene053549:intron 35.0%
!!! TACTTCCATGTGGTTTTAAC+TGG + chr4.3:20444171-20444190 MS.gene053549:intron 35.0%
!!! TCACTTTTGGTTTCCTTTTC+AGG + chr4.3:20446369-20446388 MS.gene053549:intron 35.0%
!!! TCAGGGGATATTTTGATCAA+TGG + chr4.3:20444512-20444531 MS.gene053549:CDS 35.0%
AAGTTGGGCTGAATAGTACA+CGG - chr4.3:20444795-20444814 None:intergenic 40.0%
ACACTTCTTGATGCTTTAGC+AGG + chr4.3:20443600-20443619 MS.gene053549:CDS 40.0%
AGTGAACCTCTATCCTGAAA+AGG - chr4.3:20446385-20446404 None:intergenic 40.0%
ATAAGAAGGGAATCCACCAA+TGG - chr4.3:20446443-20446462 None:intergenic 40.0%
ATGAATGGAGGAGAAGAGAA+GGG + chr4.3:20443426-20443445 MS.gene053549:CDS 40.0%
ATTATAGCCAAAAGCTGACC+TGG - chr4.3:20443555-20443574 None:intergenic 40.0%
CAATGGCAACAAACAAGCAT+TGG + chr4.3:20444529-20444548 MS.gene053549:CDS 40.0%
CACCAATGGTCATGAAAGTT+AGG - chr4.3:20446429-20446448 None:intergenic 40.0%
CAGTATCCTTCGATACAAGT+CGG + chr4.3:20445460-20445479 MS.gene053549:intron 40.0%
CCAACGCAATATATATGCCA+AGG - chr4.3:20446225-20446244 None:intergenic 40.0%
CCTTGGCATATATATTGCGT+TGG + chr4.3:20446222-20446241 MS.gene053549:CDS 40.0%
CTAACTTTCATGACCATTGG+TGG + chr4.3:20446427-20446446 MS.gene053549:CDS 40.0%
CTGATGATTTCAGTCATTCC+TGG + chr4.3:20446863-20446882 MS.gene053549:CDS 40.0%
GCAATCAACACAAGAATTGG+AGG + chr4.3:20444893-20444912 MS.gene053549:CDS 40.0%
GGTTCAAACACAAGACAATC+AGG + chr4.3:20444494-20444513 MS.gene053549:CDS 40.0%
GGTTCAAAGACTACATGCAT+TGG - chr4.3:20444430-20444449 None:intergenic 40.0%
GTGAACATGTTTCGTGATCT+TGG + chr4.3:20446184-20446203 MS.gene053549:CDS 40.0%
TCATGTCCTCCACATAAGAA+GGG - chr4.3:20446456-20446475 None:intergenic 40.0%
TTCATGTCCTCCACATAAGA+AGG - chr4.3:20446457-20446476 None:intergenic 40.0%
TTCTTATGTGGAGGACATGA+AGG + chr4.3:20446456-20446475 MS.gene053549:CDS 40.0%
TTTCTTGATGAACCAACCAG+TGG + chr4.3:20444998-20445017 MS.gene053549:CDS 40.0%
! AGAAGGGAGTTTGCTTAACT+TGG + chr4.3:20443442-20443461 MS.gene053549:CDS 40.0%
! ATAACTGGTGCTGGAATTCA+AGG + chr4.3:20447031-20447050 MS.gene053549:CDS 40.0%
! GGTGTTACGCCATATGTAAT+TGG + chr4.3:20446812-20446831 MS.gene053549:CDS 40.0%
! GTAGATTTTCCACAACCAGA+AGG - chr4.3:20443582-20443601 None:intergenic 40.0%
! TAACTGGTGCTGGAATTCAA+GGG + chr4.3:20447032-20447051 MS.gene053549:CDS 40.0%
! TTGTCGGAGTATTAACCCAT+TGG + chr4.3:20443982-20444001 MS.gene053549:intron 40.0%
!! AATCCTTTTTGAAGACCTGG+AGG - chr4.3:20446905-20446924 None:intergenic 40.0%
!! AGGTCAGCTTTTGGCTATAA+TGG + chr4.3:20443554-20443573 MS.gene053549:CDS 40.0%
!! AGTACTAGGTTGATGGATTG+AGG - chr4.3:20445107-20445126 None:intergenic 40.0%
!! ATCCTTTTTGAAGACCTGGA+GGG - chr4.3:20446904-20446923 None:intergenic 40.0%
!! GGTCAGCTTTTGGCTATAAT+GGG + chr4.3:20443555-20443574 MS.gene053549:CDS 40.0%
!! TGAGAACTAAGCACTGATTG+AGG - chr4.3:20446150-20446169 None:intergenic 40.0%
!! TGATCGGATGGATTTTGTAG+GGG - chr4.3:20445332-20445351 None:intergenic 40.0%
!! TGGTTTCCTTTTCAGGATAG+AGG + chr4.3:20446376-20446395 MS.gene053549:intron 40.0%
AACACAAGAATTGGAGGGTG+GGG + chr4.3:20444899-20444918 MS.gene053549:CDS 45.0%
ACCTGGAGGGTAATATGCTA+TGG - chr4.3:20446891-20446910 None:intergenic 45.0%
ATGGGAATCATAACTGGTGC+TGG + chr4.3:20447022-20447041 MS.gene053549:CDS 45.0%
CAACACAAGAATTGGAGGGT+GGG + chr4.3:20444898-20444917 MS.gene053549:CDS 45.0%
CACGGCTTCTTTAACGGTTA+AGG - chr4.3:20444777-20444796 None:intergenic 45.0%
CTCTTGCGCTTTCAATCTCT+AGG - chr4.3:20443383-20443402 None:intergenic 45.0%
GATGAATGGAGGAGAAGAGA+AGG + chr4.3:20443425-20443444 MS.gene053549:CDS 45.0%
GCATAAGTGGGGGTCAAAAA+AGG + chr4.3:20444930-20444949 MS.gene053549:CDS 45.0%
GCTTCCTTGGACAAAAAGGA+TGG + chr4.3:20445061-20445080 MS.gene053549:CDS 45.0%
TAATGACGAACGTTCACCGA+GGG - chr4.3:20446646-20446665 None:intergenic 45.0%
TACCCTCCAGGTCTTCAAAA+AGG + chr4.3:20446899-20446918 MS.gene053549:intron 45.0%
TCAACACAAGAATTGGAGGG+TGG + chr4.3:20444897-20444916 MS.gene053549:CDS 45.0%
TCAATTCTTCAGGGTCTGAC+TGG + chr4.3:20443519-20443538 MS.gene053549:CDS 45.0%
TGGATTCCCTTCTTATGTGG+AGG + chr4.3:20446447-20446466 MS.gene053549:CDS 45.0%
! GAGATGGATTTAGCAGAGAC+TGG + chr4.3:20445887-20445906 MS.gene053549:CDS 45.0%
! GATTGAAAGCGCAAGAGAAG+AGG + chr4.3:20443386-20443405 MS.gene053549:CDS 45.0%
! GGCTATTATTGGTTACGCCT+TGG + chr4.3:20446205-20446224 MS.gene053549:CDS 45.0%
! GGGGTGTTAAAGGCATAAGT+GGG + chr4.3:20444918-20444937 MS.gene053549:CDS 45.0%
! GGGTGTTAAAGGCATAAGTG+GGG + chr4.3:20444919-20444938 MS.gene053549:CDS 45.0%
! GGTGTTAAAGGCATAAGTGG+GGG + chr4.3:20444920-20444939 MS.gene053549:CDS 45.0%
! TGGGGTGTTAAAGGCATAAG+TGG + chr4.3:20444917-20444936 MS.gene053549:CDS 45.0%
!! AGCATTGGCTTATGGAACCT+CGG + chr4.3:20444544-20444563 MS.gene053549:CDS 45.0%
!! ATAATGGGTCCTTCTGGTTG+TGG + chr4.3:20443570-20443589 MS.gene053549:CDS 45.0%
!! GTGACTGTTTCTGCTTCAAC+AGG + chr4.3:20443477-20443496 MS.gene053549:CDS 45.0%
!! TGGTGGATTCCCTTCTTATG+TGG + chr4.3:20446444-20446463 MS.gene053549:CDS 45.0%
!! TTGGCTATAATGGGTCCTTC+TGG + chr4.3:20443564-20443583 MS.gene053549:CDS 45.0%
!! ATATTTATATACAAATTATT+GGG + chr4.3:20444309-20444328 MS.gene053549:intron 5.0%
!!! AAATAATATCATATTTTAAT+TGG - chr4.3:20444451-20444470 None:intergenic 5.0%
AAAGCACAATCTGTGGCAGC+GGG + chr4.3:20444353-20444372 MS.gene053549:intron 50.0%
AGCTGCACTATCAAGTCCAC+TGG - chr4.3:20445017-20445036 None:intergenic 50.0%
CAAAGCACAATCTGTGGCAG+CGG + chr4.3:20444352-20444371 MS.gene053549:intron 50.0%
CTAATGACGAACGTTCACCG+AGG - chr4.3:20446647-20446666 None:intergenic 50.0%
GCACTATCAAGTCCACTGGT+TGG - chr4.3:20445013-20445032 None:intergenic 50.0%
GCCATAGCATATTACCCTCC+AGG + chr4.3:20446887-20446906 MS.gene053549:CDS 50.0%
GGGTAATATGCTATGGCTCC+AGG - chr4.3:20446884-20446903 None:intergenic 50.0%
! ATTGGAGGGTGGGGTGTTAA+AGG + chr4.3:20444908-20444927 MS.gene053549:CDS 50.0%
! CTGACTGGTTATGCAAAGCC+AGG + chr4.3:20443534-20443553 MS.gene053549:CDS 50.0%
! CTTCTGCTGCATCTGAGGTT+AGG + chr4.3:20445194-20445213 MS.gene053549:intron 50.0%
! GAAAGCGCAAGAGAAGAGGT+AGG + chr4.3:20443390-20443409 MS.gene053549:CDS 50.0%
! GGATTTTGTAGGGGAGGACA+AGG - chr4.3:20445323-20445342 None:intergenic 50.0%
! TGCAAAGCCAGGTCAGCTTT+TGG + chr4.3:20443545-20443564 MS.gene053549:CDS 50.0%
!! TCGGATGGATTTTGTAGGGG+AGG - chr4.3:20445329-20445348 None:intergenic 50.0%
AAGCACAATCTGTGGCAGCG+GGG + chr4.3:20444354-20444373 MS.gene053549:intron 55.0%
ACCTCAGATGCAGCAGAAGC+AGG - chr4.3:20445193-20445212 None:intergenic 55.0%
ACCTGCTTCTGCTGCATCTG+AGG + chr4.3:20445189-20445208 MS.gene053549:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 20443348 20447070 20443348 ID=MS.gene053549
chr4.3 mRNA 20443348 20447070 20443348 ID=MS.gene053549.t1;Parent=MS.gene053549
chr4.3 exon 20443348 20443621 20443348 ID=MS.gene053549.t1.exon1;Parent=MS.gene053549.t1
chr4.3 CDS 20443348 20443621 20443348 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20444486 20444565 20444486 ID=MS.gene053549.t1.exon2;Parent=MS.gene053549.t1
chr4.3 CDS 20444486 20444565 20444486 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20444740 20445210 20444740 ID=MS.gene053549.t1.exon3;Parent=MS.gene053549.t1
chr4.3 CDS 20444740 20445210 20444740 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20445299 20445385 20445299 ID=MS.gene053549.t1.exon4;Parent=MS.gene053549.t1
chr4.3 CDS 20445299 20445385 20445299 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20445881 20446024 20445881 ID=MS.gene053549.t1.exon5;Parent=MS.gene053549.t1
chr4.3 CDS 20445881 20446024 20445881 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20446109 20446300 20446109 ID=MS.gene053549.t1.exon6;Parent=MS.gene053549.t1
chr4.3 CDS 20446109 20446300 20446109 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20446391 20446477 20446391 ID=MS.gene053549.t1.exon7;Parent=MS.gene053549.t1
chr4.3 CDS 20446391 20446477 20446391 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20446779 20446908 20446779 ID=MS.gene053549.t1.exon8;Parent=MS.gene053549.t1
chr4.3 CDS 20446779 20446908 20446779 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
chr4.3 exon 20446975 20447070 20446975 ID=MS.gene053549.t1.exon9;Parent=MS.gene053549.t1
chr4.3 CDS 20446975 20447070 20446975 ID=cds.MS.gene053549.t1;Parent=MS.gene053549.t1
Gene Sequence

>MS.gene053549

ATGGCTTCCCTTCTTTCATCTGTGCCTAATATCCTAGAGATTGAAAGCGCAAGAGAAGAGGTAGGAGCATCAAAAAAGATGAATGGAGGAGAAGAGAAGGGAGTTTGCTTAACTTGGAAAGATTTATGGGTGACTGTTTCTGCTTCAACAGGAAAAACCAATGAAAGCAAATCAATTCTTCAGGGTCTGACTGGTTATGCAAAGCCAGGTCAGCTTTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGTACTACATGATCTTGACCATTTATGCTTTGTGGAAAATCTACATTTCTTGACACTTTTTGCATGCAAATAACTAACTTCCAACTGCTATATATAACTTCCTAAATCCAAATCACCAACATACTATTTCAACAATATGTAACATGTCTAATTTTGTATATTGTTTCTCAAGGTTAACTCATTTAAACGAATTAATATATTTGCTTAATTAATAACTTCAAATGAAAAATACTTCATTTTAAATTAAAACCTTATGTTTTAAAGTTCATGGCTGATGGCTTCTATTTCATTTTTTTGGATGATATTTGATTGTCTACATATAATCTTTTTCCTTTGATAAACACATGTTTTTCTGAAGAATTTGTCGGAGTATTAACCCATTGGTAAAAGTTTGACTTTATAATCTTAAATGACAAAATTCAAATCTCTTCGGTCGTAAAATAAATAGGCATTAGTATCGTGTTTATGAAAAAAGCTACATATTACTAGTAATTTGGTTTTAAACTAAGAAGGGAAGTTGACTGTTAAATTAAAAAATCAAAGTCAAAACTACTTCCATGTGGTTTTAACTGGTTTTTAGGATGAAGATGTGTTTTTAATTCTTAAACAGGAGGCGTGTCATCTTGACATACGCGTTATTTCATCTTACTGAAAAATTCTATGTACACACATTAAATAATAAGTTTAGATATTTATATACAAATTATTGGGTGGGAACTCTGAGAATGAAACAAAGCACAATCTGTGGCAGCGGGGTTTTTCTTTTATAATTGTGTTCAATTCTTTAAATTAAAGTTTATTAAGTTCCAATGCATGTAGTCTTTGAACCAATTAAAATATGATATTATTTTTATATGTATTTCAGGGAGATTAGGTTCAAACACAAGACAATCAGGGGATATTTTGATCAATGGCAACAAACAAGCATTGGCTTATGGAACCTCGGTATATATAAAATCTAAAATTCTTCAATAAAAACAAATTGTAGAGTATACTACTCAAACAGTGCATGTATTATTTCAATTGATCTGTATATGTAATCACAACACAAACATATGTCACACAATATGATGATAATACTTAAACATTGTTTCAATTAATATGTATATGTGATCACAGGCATATGTCACACAAGATGATACTTTATTAACAACCTTAACCGTTAAAGAAGCCGTGTACTATTCAGCCCAACTTCAATTACCTGACACAATGTCTAATGAAGAGAAAAAAGAAAGAGCTGATTTTACAATAAGAGAAATGGGTCTGCAAGATGCAATCAACACAAGAATTGGAGGGTGGGGTGTTAAAGGCATAAGTGGGGGTCAAAAAAGGAGAGTTAGCATTTGCATTGAGATTCTTACACGTCCTAGACTTCTTTTTCTTGATGAACCAACCAGTGGACTTGATAGTGCAGCTTCTTACTATGTTATGAAAAGAATAGCTTCCTTGGACAAAAAGGATGGAATTCAAAGGACCATTATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCATAATCTTTGTCTTTTGTCTTCAGGCAAAACAGTTTACTTTGGACCTGCTTCTGCTGCATCTGAGGTTAGGATTAATTATGTTCCATGTTAATTTTCAATTATATATAATTGATGACCATTTAGTAATTAATTCTGTTTTTGTTCCAATGTAGTTTTTTGCTTTGAACGGATTTCCTTGTCCTCCCCTACAAAATCCATCCGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGTAAGTTGATTAAGTAATGATAACATCGATTGTTTGTTTCATAGATTCCTTCTTTTTTTTAGTATCATGGTTATCAGTATCCTTCGATACAAGTCGGAAATATCAAGATTCGATACAAAATTGAACTCAATATGAATCCCTAGTGTCTATCTATTTTGCACATGAACCACATTGTGAATTCTGATAATCTAGATGTATTAAAATGAATAATTACCTACATTTTTGTATCCAACCATGTTTTTATGTCAACTTTGTATAGTCAGTCACTTTTCTTTTGTAATTTGATTTATGAGTTGAATCTTGAATTATTTAAGGTTCGTATATGATATACTCGTAATGTATCTTATGAGTCCTAATAAAAGTTGATTCAATGTTCAGAAAAGAGTTCTTCTGATTTATGATATGAATCACAATTTAGTAACCATAATTAGTATTACAACATATTCTAACATATATAATTCATATAAATGATTTTGAAATATGTTTCAATGTTAGGATATTGAGATGGATTTAGCAGAGACTGGAACAATTTCCATAGAACAAGCAATTGATATCCTTGTGAGCTCATATTCTTCATCCGAAAGAAACCAAGAAATTAAAAATGAAGTATCAATATTGTCTATAGTATTGTCTTTAAAGGTATCCTCTAAATTTGAGCTAAATTTAATTATTAGTTGTTATAGTAAAAAAAATATTGACATGAAACTTTGATGGGTGTTTTAGGATAATAATTCAACATACAAGAAAAAACATGCTGGCTTCCTCAATCAGTGCTTAGTTCTCACCAGAAGATCTTTTGTGAACATGTTTCGTGATCTTGGCTATTATTGGTTACGCCTTGGCATATATATTGCGTTGGCTATAAGTTTAGCCACTGTCTTTAATGATTTGGATAAAAGTAATGGCTCAATTCAGGTAATTAACAATACCTTATATTACATTAACTGACCTTAAGTTTAGCTACTATCTTCTAATTTTGCATGTCACTTTTGGTTTCCTTTTCAGGATAGAGGTTCACTTCTTATGTTTGTGTTCTCATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGACATGAAGGTATAGTTCAAAGTTTCAAACTATTTTTATAAAAAGTTTTGCAAATATATATTGAATGAATGGTCAAACTGATTCTCGAAGTTGTAAGCATCGGTCAAAATAGTTCATAACTTTTGTGAATTGGTAAATACATTTTCAAAAATGAAAAAAATCGTTCAAAATTATCCCTCGGTGAACGTTCGTCATTAGAGTCTTACAATTTCGATTAGCAGTTTCTATATTAACTTGATATGTATCTGTAGTCACTAAATTATTGTTTTATTCGGTCTTTTATGGTATCATATGCTATTAATTTGTATAGGTATTTGAACGTGAAAGACTAAATGGACACTATGGTGTTACGCCATATGTAATTGGAAACACACTTTCAGCTATTCCATATTTGCTGATGATTTCAGTCATTCCTGGAGCCATAGCATATTACCCTCCAGGTCTTCAAAAAGGATTTGAGCACTTCATATATTTTATCTGTGCTCTATTTTCTTGTCTAATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGCATTGTCCCTGATTTTCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGGATTATGATGTTGGCAG

Protein sequence

>MS.gene053549.t1

MASLLSSVPNILEIESAREEVGASKKMNGGEEKGVCLTWKDLWVTVSASTGKTNESKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIEMDLAETGTISIEQAIDILVSSYSSSERNQEIKNEVSILSIVLSLKDNNSTYKKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALAISLATVFNDLDKSNGSIQDRGSLLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTPYVIGNTLSAIPYLLMISVIPGAIAYYPPVESLMMIVASIVPDFLMGIITGAGIQGIMMLA